View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15655_high_30 (Length: 317)
Name: NF15655_high_30
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15655_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 15 - 293
Target Start/End: Complemental strand, 32848332 - 32848054
Alignment:
| Q |
15 |
gagaagaaggtgatgaatgagtgaatgaagagaaggtgtggtgtttaagggtgatatcttgctgtaagaaattgacacgaaaacaaaacgctattgtcac |
114 |
Q |
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| T |
32848332 |
gagaagaaggtgatgaatgagtgaatgaagagaaggtgtggtgtttaagggtgatatcttgctgtaagaaattgacacgaaaacaaaacgctattgtcac |
32848233 |
T |
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| Q |
115 |
tcagtttatatttagacataaaccgaatatgcttttctattgcaccagaaaaataattagtatttattggttttctttcatgcacaggttggtactaccg |
214 |
Q |
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| T |
32848232 |
tcagtttatatttagacataaaccgaatatgcttttctattgcaccagaaaaataattagtatttattggttttctttcatgcacaggttggtactaccg |
32848133 |
T |
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| Q |
215 |
tccaatcgtgaaaaagagtagcgcgtttttcacgcaaagctaaataagaaaaaagagacttcagtaaatttcactctac |
293 |
Q |
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| T |
32848132 |
tccaatcgtgaaaaagagtagcgcgtttttcacgcaaagctaaataagaaaaaagagacttcagtaaatttcactctac |
32848054 |
T |
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