View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15655_high_41 (Length: 260)
Name: NF15655_high_41
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15655_high_41 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 13748278 - 13748040
Alignment:
| Q |
1 |
aagacggggaataatcttggcgttgatcacaaagagcaggaaacaacaccagatgatgaaccggattggcggaaaatgtttctggatggaatgcaggata |
100 |
Q |
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| T |
13748278 |
aagacggggaataatcttggagttgatcacaaagagcaggaaacaacaccagatgatgaaccggattggcggaaaatgtttctggatggaatgcaggata |
13748179 |
T |
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| Q |
101 |
gagaaaaagcacttctaaccgagtacactaatactcttcggaattacaaagatgttaagaagaggctcgccgaaatagaggacaaaaatcaagacaaaac |
200 |
Q |
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| T |
13748178 |
gagaaaaagcacttctaaccgagtacactaatactcttcggaattacaaagatgttaagaagaggctcgccgaaatagaggacaaaaatcaagacaaaac |
13748079 |
T |
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| Q |
201 |
cttggattcttgtttgcaattgcagttaaatgaactgaa |
239 |
Q |
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| T |
13748078 |
cttggattcttgtttgcaattgcagttaaatgaactgaa |
13748040 |
T |
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