View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15655_low_2 (Length: 724)

Name: NF15655_low_2
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15655_low_2
NF15655_low_2
[»] chr4 (57 HSPs)
chr4 (351-705)||(32115016-32115370)
chr4 (10-304)||(43979556-43979850)
chr4 (10-304)||(12922870-12923164)
chr4 (10-304)||(46262863-46263157)
chr4 (10-304)||(1317059-1317353)
chr4 (10-304)||(30545712-30546007)
chr4 (10-304)||(790123-790417)
chr4 (10-304)||(2669235-2669528)
chr4 (10-304)||(28957539-28957832)
chr4 (10-304)||(40841461-40841754)
chr4 (10-303)||(31228107-31228399)
chr4 (10-304)||(38025904-38026197)
chr4 (10-301)||(55347563-55347853)
chr4 (10-304)||(28505208-28505502)
chr4 (10-304)||(21235027-21235322)
chr4 (172-302)||(12108248-12108377)
chr4 (213-304)||(12922641-12922731)
chr4 (213-304)||(43979989-43980079)
chr4 (212-304)||(28957310-28957401)
chr4 (212-304)||(31227878-31227969)
chr4 (212-304)||(40841892-40841983)
chr4 (213-304)||(789894-789984)
chr4 (201-304)||(21235449-21235550)
chr4 (213-304)||(30546146-30546236)
chr4 (212-304)||(47053760-47053852)
chr4 (201-304)||(2669006-2669108)
chr4 (213-304)||(47058507-47058598)
chr4 (221-303)||(10580040-10580122)
chr4 (201-303)||(38025676-38025777)
chr4 (215-304)||(1317494-1317582)
chr4 (227-303)||(1791389-1791465)
chr4 (213-304)||(46262634-46262724)
chr4 (213-304)||(54167493-54167584)
chr4 (214-304)||(17288374-17288464)
chr4 (214-296)||(55347970-55348051)
chr4 (214-303)||(54142325-54142414)
chr4 (220-304)||(29691746-29691830)
chr4 (214-301)||(12107708-12107794)
chr4 (214-304)||(49426353-49426443)
chr4 (214-304)||(54143502-54143592)
chr4 (222-303)||(7118002-7118082)
chr4 (220-302)||(5545018-5545100)
chr4 (214-304)||(17287486-17287576)
chr4 (213-303)||(7164989-7165080)
chr4 (227-301)||(48554071-48554145)
chr4 (223-303)||(26168165-26168245)
chr4 (210-258)||(28505638-28505686)
chr4 (214-302)||(49424455-49424543)
chr4 (213-304)||(54168823-54168914)
chr4 (227-301)||(3296719-3296793)
chr4 (227-301)||(35166708-35166782)
chr4 (244-304)||(51906677-51906737)
chr4 (249-304)||(5544956-5545011)
chr4 (225-304)||(7118176-7118255)
chr4 (214-304)||(29691524-29691614)
chr4 (227-301)||(51906595-51906668)
chr4 (214-304)||(51906820-51906910)
[»] chr7 (25 HSPs)
chr7 (10-304)||(884681-884975)
chr7 (10-304)||(28898257-28898551)
chr7 (10-304)||(1244010-1244304)
chr7 (10-304)||(41298243-41298537)
chr7 (10-304)||(33847865-33848158)
chr7 (10-304)||(29784163-29784469)
chr7 (10-303)||(18443176-18443470)
chr7 (10-138)||(22954274-22954402)
chr7 (213-304)||(1244443-1244533)
chr7 (201-304)||(18443597-18443699)
chr7 (213-304)||(28898028-28898118)
chr7 (213-304)||(41298676-41298766)
chr7 (213-303)||(29783935-29784024)
chr7 (212-304)||(33848296-33848387)
chr7 (224-303)||(28838525-28838604)
chr7 (210-304)||(22954045-22954138)
chr7 (220-303)||(20544145-20544228)
chr7 (212-304)||(30939563-30939655)
chr7 (225-303)||(49053719-49053797)
chr7 (224-301)||(20544321-20544398)
chr7 (212-255)||(27310095-27310138)
chr7 (223-283)||(10466635-10466695)
chr7 (213-257)||(27311048-27311092)
chr7 (214-304)||(17075618-17075708)
chr7 (214-304)||(32092227-32092317)
[»] chr2 (49 HSPs)
chr2 (10-304)||(3854065-3854359)
chr2 (10-304)||(12089693-12089987)
chr2 (10-304)||(22701515-22701805)
chr2 (10-304)||(1804460-1804753)
chr2 (10-304)||(6476086-6476379)
chr2 (10-304)||(11450984-11451277)
chr2 (10-304)||(27377648-27377941)
chr2 (10-304)||(34038037-34038342)
chr2 (10-303)||(26525462-26525756)
chr2 (10-304)||(39096752-39097047)
chr2 (51-301)||(38110246-38110492)
chr2 (182-304)||(10708022-10708144)
chr2 (212-304)||(1804231-1804322)
chr2 (212-304)||(6476517-6476608)
chr2 (213-304)||(3854498-3854588)
chr2 (213-304)||(12090126-12090216)
chr2 (213-304)||(39096523-39096613)
chr2 (212-304)||(11450755-11450846)
chr2 (212-304)||(27378079-27378170)
chr2 (213-303)||(26525895-26525984)
chr2 (211-304)||(10709474-10709567)
chr2 (211-304)||(39947084-39947177)
chr2 (212-304)||(44934682-44934774)
chr2 (213-304)||(34037808-34037898)
chr2 (211-304)||(39945841-39945934)
chr2 (213-304)||(23221833-23221924)
chr2 (220-303)||(24093329-24093412)
chr2 (213-304)||(44929982-44930073)
chr2 (220-302)||(32861047-32861129)
chr2 (210-304)||(18107422-18107516)
chr2 (214-304)||(23222864-23222954)
chr2 (188-296)||(18105723-18105831)
chr2 (214-304)||(2035607-2035697)
chr2 (211-297)||(10710828-10710914)
chr2 (258-304)||(22704429-22704475)
chr2 (214-303)||(2191217-2191306)
chr2 (225-304)||(21182306-21182385)
chr2 (214-304)||(2036604-2036694)
chr2 (227-301)||(2191392-2191466)
chr2 (214-304)||(21217322-21217412)
chr2 (214-304)||(21264990-21265080)
chr2 (211-304)||(10711000-10711093)
chr2 (213-250)||(22701945-22701982)
chr2 (225-304)||(3624925-3625004)
chr2 (236-297)||(2517579-2517641)
chr2 (262-304)||(7083694-7083736)
chr2 (214-304)||(21216922-21217012)
chr2 (214-304)||(21265390-21265480)
chr2 (223-304)||(24093155-24093236)
[»] chr1 (34 HSPs)
chr1 (10-304)||(45230128-45230422)
chr1 (10-304)||(30427672-30427966)
chr1 (10-304)||(17968265-17968559)
chr1 (10-304)||(47410651-47410944)
chr1 (10-304)||(32266482-32266775)
chr1 (10-304)||(9122684-9122977)
chr1 (10-304)||(40124075-40124368)
chr1 (10-304)||(46802321-46802614)
chr1 (213-304)||(17968036-17968126)
chr1 (212-304)||(32266913-32267004)
chr1 (213-304)||(45230561-45230651)
chr1 (213-303)||(30428105-30428194)
chr1 (212-304)||(40124506-40124597)
chr1 (201-304)||(46802741-46802843)
chr1 (201-304)||(47410422-47410524)
chr1 (210-303)||(9123113-9123205)
chr1 (220-303)||(3591171-3591254)
chr1 (211-303)||(8997340-8997432)
chr1 (212-304)||(1500980-1501072)
chr1 (220-303)||(19895573-19895656)
chr1 (213-304)||(36793574-36793665)
chr1 (172-242)||(8998194-8998264)
chr1 (214-303)||(37717797-37717885)
chr1 (236-303)||(50359290-50359357)
chr1 (224-303)||(18180052-18180131)
chr1 (213-304)||(45664686-45664777)
chr1 (224-302)||(5683335-5683413)
chr1 (222-304)||(12869663-12869745)
chr1 (214-304)||(18179878-18179968)
chr1 (218-304)||(31889433-31889519)
chr1 (215-304)||(12868432-12868521)
chr1 (213-304)||(36792239-36792329)
chr1 (214-304)||(5172744-5172834)
chr1 (212-257)||(1500105-1500150)
[»] chr6 (28 HSPs)
chr6 (10-301)||(33106931-33107222)
chr6 (10-304)||(15147717-15148010)
chr6 (10-304)||(14257146-14257439)
chr6 (10-304)||(20824163-20824456)
chr6 (10-302)||(6162246-6162549)
chr6 (10-135)||(34984283-34984408)
chr6 (172-304)||(20228194-20228325)
chr6 (172-304)||(22122178-22122309)
chr6 (213-304)||(33107361-33107451)
chr6 (213-302)||(6162688-6162776)
chr6 (212-304)||(20824594-20824685)
chr6 (213-304)||(34984545-34984634)
chr6 (10-124)||(20227809-20227923)
chr6 (10-124)||(22121793-22121907)
chr6 (201-304)||(14257566-14257668)
chr6 (220-303)||(14712830-14712913)
chr6 (210-304)||(15148146-15148239)
chr6 (214-304)||(20522157-20522246)
chr6 (214-304)||(8710341-8710431)
chr6 (220-303)||(8709601-8709678)
chr6 (214-304)||(5974010-5974100)
chr6 (214-304)||(19595650-19595740)
chr6 (226-303)||(21113202-21113279)
chr6 (213-301)||(20227059-20227146)
chr6 (213-301)||(22121043-22121130)
chr6 (210-257)||(20521231-20521278)
chr6 (214-304)||(211440-211530)
chr6 (214-248)||(19579203-19579237)
[»] chr3 (41 HSPs)
chr3 (10-304)||(34949984-34950278)
chr3 (10-304)||(22406841-22407135)
chr3 (10-304)||(27475526-27475820)
chr3 (10-304)||(42606279-42606572)
chr3 (10-304)||(36899253-36899546)
chr3 (10-304)||(45539437-45539730)
chr3 (10-299)||(2388636-2388924)
chr3 (10-304)||(46689681-46689974)
chr3 (10-304)||(4199452-4199747)
chr3 (201-304)||(4199874-4199976)
chr3 (213-304)||(34949755-34949845)
chr3 (212-304)||(46690112-46690203)
chr3 (217-304)||(27475389-27475475)
chr3 (212-304)||(45539208-45539299)
chr3 (213-304)||(22407274-22407364)
chr3 (201-304)||(42606699-42606801)
chr3 (212-304)||(20826727-20826819)
chr3 (201-304)||(2389051-2389153)
chr3 (201-304)||(36899673-36899775)
chr3 (213-304)||(20831101-20831192)
chr3 (214-304)||(48868588-48868678)
chr3 (220-303)||(25770494-25770577)
chr3 (212-304)||(35300743-35300835)
chr3 (224-303)||(44504265-44504344)
chr3 (220-303)||(9218348-9218431)
chr3 (220-303)||(37172254-37172337)
chr3 (228-302)||(27013583-27013657)
chr3 (214-304)||(44504387-44504477)
chr3 (214-304)||(48867649-48867739)
chr3 (214-301)||(54588458-54588546)
chr3 (223-304)||(132069-132150)
chr3 (214-303)||(3799722-3799811)
chr3 (224-303)||(131948-132027)
chr3 (214-304)||(47342745-47342835)
chr3 (220-290)||(50732367-50732437)
chr3 (220-290)||(50780418-50780488)
chr3 (212-257)||(7248488-7248533)
chr3 (220-292)||(26741138-26741210)
chr3 (213-257)||(51587575-51587619)
chr3 (214-301)||(33225490-33225577)
chr3 (214-267)||(47343726-47343779)
[»] chr5 (40 HSPs)
chr5 (10-304)||(3878771-3879065)
chr5 (10-304)||(31092994-31093288)
chr5 (10-303)||(21949400-21949692)
chr5 (10-304)||(5746989-5747282)
chr5 (10-304)||(6543414-6543707)
chr5 (10-304)||(28641389-28641682)
chr5 (10-304)||(31162420-31162713)
chr5 (10-304)||(3191797-3192092)
chr5 (10-304)||(39402440-39402735)
chr5 (201-304)||(39402211-39402313)
chr5 (212-304)||(31162851-31162942)
chr5 (213-304)||(3192231-3192321)
chr5 (212-304)||(28641160-28641251)
chr5 (213-304)||(31093427-31093517)
chr5 (210-304)||(119009-119103)
chr5 (210-304)||(119955-120049)
chr5 (212-304)||(5746760-5746851)
chr5 (212-302)||(21949830-21949919)
chr5 (179-304)||(19352298-19352423)
chr5 (212-304)||(6543845-6543935)
chr5 (213-304)||(718224-718315)
chr5 (213-304)||(3879204-3879294)
chr5 (213-303)||(14626089-14626179)
chr5 (215-304)||(119183-119272)
chr5 (211-304)||(19353067-19353160)
chr5 (213-304)||(4186753-4186844)
chr5 (210-304)||(14625121-14625214)
chr5 (210-304)||(19353235-19353329)
chr5 (220-303)||(3406692-3406775)
chr5 (215-297)||(119786-119868)
chr5 (214-304)||(4187837-4187927)
chr5 (212-257)||(19352517-19352562)
chr5 (223-304)||(18999365-18999446)
chr5 (214-304)||(18999641-18999731)
chr5 (221-257)||(8647358-8647394)
chr5 (213-257)||(30351704-30351748)
chr5 (211-302)||(37813376-37813467)
chr5 (262-304)||(87137-87179)
chr5 (227-304)||(18339314-18339391)
chr5 (224-257)||(18340661-18340694)
[»] chr8 (28 HSPs)
chr8 (10-300)||(12734401-12734691)
chr8 (10-304)||(29917333-29917628)
chr8 (213-304)||(29917104-29917194)
chr8 (213-304)||(12734172-12734262)
chr8 (11-154)||(42253366-42253521)
chr8 (210-304)||(24845962-24846055)
chr8 (213-304)||(4624532-4624623)
chr8 (220-303)||(21005956-21006039)
chr8 (179-304)||(4624359-4624484)
chr8 (220-303)||(44024398-44024481)
chr8 (220-301)||(10047653-10047734)
chr8 (220-303)||(6297635-6297718)
chr8 (213-304)||(36155270-36155361)
chr8 (215-304)||(4694434-4694523)
chr8 (213-302)||(20682924-20683013)
chr8 (214-296)||(6297863-6297945)
chr8 (224-302)||(11089133-11089211)
chr8 (213-301)||(26720323-26720411)
chr8 (224-303)||(20682708-20682787)
chr8 (214-304)||(40304683-40304773)
chr8 (213-302)||(44148578-44148667)
chr8 (213-301)||(16682533-16682621)
chr8 (214-257)||(6298036-6298079)
chr8 (214-257)||(36156359-36156402)
chr8 (270-300)||(12734706-12734736)
chr8 (214-268)||(22601534-22601587)
chr8 (386-443)||(40777982-40778039)
chr8 (225-254)||(45369134-45369163)
[»] scaffold0085 (2 HSPs)
scaffold0085 (10-304)||(39649-39942)
scaffold0085 (212-304)||(39420-39511)
[»] scaffold0148 (2 HSPs)
scaffold0148 (213-304)||(32994-33085)
scaffold0148 (212-304)||(29273-29365)
[»] scaffold0009 (2 HSPs)
scaffold0009 (224-303)||(107895-107974)
scaffold0009 (214-301)||(108123-108210)
[»] scaffold0063 (1 HSPs)
scaffold0063 (220-303)||(34965-35048)
[»] scaffold0177 (1 HSPs)
scaffold0177 (214-304)||(25843-25933)


Alignment Details
Target: chr4 (Bit Score: 307; Significance: 1e-172; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 351 - 705
Target Start/End: Complemental strand, 32115370 - 32115016
Alignment:
Q  351 aagaggccaaaacaaaatctgttaacatacctttctttaaagcaaactgtgtgactaaaagagattaaaaagcgtcaataatacaagaaacaagcacaaa 450  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  32115370 aagaggccaaaacaaaatatgttaacatacctctctttaaagcaaactgtgtgactaaaagagattaaaaagtgtcaataatacaagaaacgagcacaaa 32115271  T
Q  451 actaaaaacaaattacacagtgattaaatccatacaaagcaagttaagggattagaccataaaaaatgaaaatcgacaaaagagtgtgatttttgagtct 550  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  32115270 actaaaaacaaattacacagtgattaaattcatacaaagcaagctaagggattagaccatcaaaaatgaaaatctacaaaagagtgtgatttctgagtct 32115171  T
Q  551 tcaatcaccatcaatgaagcttaatttgcacaagaagctgttccaatgctagctctttgttacaaaaaatcatagcactgtgctctttcgaaagaatcca 650  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32115170 tcaatcaccatcaatgaagcttagtttgctcaagaagctgttccaatgctagctctttgttacaaaaaattatagcactgtgctctttcgaaagaatcca 32115071  T
Q  651 aatacaagtcaagattacttgaaatgaggagcgaatatcattcatgaacacatga 705  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32115070 aatacaagtcaagattacttgaaatgaggagcgaatatcattcatgaacacatga 32115016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 43979850 - 43979556
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43979850 acatcatcgttttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 43979751  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  43979750 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 43979651  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43979650 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacatagggaccaaaaacatatttaaccc 43979556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 12922870 - 12923164
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12922870 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 12922969  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  12922970 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 12923069  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  12923070 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtacaaaatgtagggaccaaaaacatattgaaccc 12923164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 46262863 - 46263157
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  46262863 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 46262962  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  46262963 aagttcgtggtgaagttctccgccattttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 46263062  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46263063 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 46263157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 1317353 - 1317059
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  1317353 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgaggaacaccggcgatccgcatctacgaagctgcggaga 1317254  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  1317253 aagttcgtggtgaagttcttcgccgttttccggcgagattgaaccgtcaacattggcatcacgttagaaatttgacaatatggactatttacactaactc 1317154  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1317153 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 1317059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 30546007 - 30545712
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  30546007 acatcatcgctttcgacctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcagaga 30545908  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  30545907 aagatcgtggtgaagttctccaccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 30545808  T
Q  210 -aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30545807 aaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 30545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 790123 - 790417
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  790123 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 790222  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  790223 aagttcgtggtgaagttctccgccattttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 790322  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  790323 aggaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacttagggaccaaaaacatatttaaccc 790417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 2669235 - 2669528
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||| ||||| ||||||||||    
T  2669235 acatcatcgcttttggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcaatccgcatatacgacgctgcggaga 2669334  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||      
T  2669335 aagatcgtggtgaagttccccgccgttttttggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacatggactatttacgctaacgg 2669434  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  2669435 agaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 2669528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 28957539 - 28957832
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  28957539 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 28957638  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  28957639 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 28957738  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  28957739 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 28957832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 40841754 - 40841461
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  40841754 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacaacggcgatccgcatctacgacgctgcggaga 40841655  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||| ||||||| | |||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |||||      
T  40841654 aagatcgtggcgaagttccctgccgttttccgaggagattgaaccgccaacattggcatcacgttagaaacttgacaacagggactatttacgctaacgg 40841555  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| ||||||||||||||||||||||||||    
T  40841554 agaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 40841461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 10 - 303
Target Start/End: Original strand, 31228107 - 31228399
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  31228107 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 31228206  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  31228207 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 31228306  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| | |||| ||||||| |||||||||||||||||    
T  31228307 aggaaaaatgtagggattttaaaaacatttattgaaatgtaggaact-attctcaaaatcgcgtaaaatgtagggatcaaaaacatatttaacc 31228399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 38025904 - 38026197
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| ||| || ||||||||||||| ||||||||||  |||||||||    
T  38025904 acatcatcgctttcggcctccaaatcttccccactaaaccaacatatttcactggaaatgtaacaaacaccggcgatctgcatctacgacactgcggaga 38026003  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  38026004 aagatcgtggtgaagttccccgtcgttttcctgcgagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 38026103  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | | |||| ||||| ||||||||||||||||||||    
T  38026104 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcgtaaaatgtaggaaccaaaaacatatttaaccc 38026197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 10 - 301
Target Start/End: Complemental strand, 55347853 - 55347563
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||    
T  55347853 acatcatcgctttcggcctccaaatcttcccctctaaaccaagatatttcactagaaatgtgacgaacaccggcgatccgcatctacgaccctgcggaga 55347754  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||       
T  55347753 aagatcgtggtgaagttccccgccgtttttcggggagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacgctaatgg 55347654  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| | | |||| |||||||||||||| ||||||||    
T  55347653 aggaaaaatgtagggattttaaaaacatttattaaaatgtagggact-attctcaaaattgcgtaaaatgtagggaccaaaaatatatttaa 55347563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 28505502 - 28505208
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||  ||||||| ||||||||||    
T  28505502 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaacaccagcgatccgtgtctacgatgctgcggaga 28505403  T
Q  110 aagatcgtggtgaagttctcc-gccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaact 208  Q
    ||||||||||||||||| |   |  ||| |||| |||||||||||||||||||| ||||||| ||||  ||||||||| || ||||||||||| |||||     
T  28505402 aagatcgtggtgaagttatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaacg 28505303  T
Q  209 caggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  28505302 gaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 28505208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 21235322 - 21235027
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |  |||||||  |||||||||    
T  21235322 acatcatcactttcggccctcaaatcttcccctctaaaccaacatatttcactggaagcgtgacgaacaccgacgatctgtgtctacgatactgcggaga 21235223  T
Q  110 aagatcgtggtgaagttctccgcc--gttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaac 207  Q
    ||||||||||||||| ||   |    ||| |||| |||||||||||||||||||| | ||||| ||||| ||||||||| ||  ||||| |||| |||||    
T  21235222 aagatcgtggtgaagctcatagagaagttctccgccgagattgaaccgccaacatcgacatcaagttagtaatttgacagcagagactacttacgctaac 21235123  T
Q  208 tcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
      ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  21235122 ggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggact-attatcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 21235027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 12108248 - 12108377
Alignment:
Q  172 gttagaaatttgacaacatggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgt 271  Q
    ||||||||||||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  12108248 gttagaaatttgacagcaaggactatttacactaacagagaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgt 12108346  T
Q  272 gcaaaacgtagggaccaaaaacatatttaac 302  Q
      ||||  |||||||||| ||||||||||||    
T  12108347 ataaaatttagggaccaataacatatttaac 12108377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 12922731 - 12922641
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | |||||| ||||||||||||||||||||||||||    
T  12922731 aaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcgcaaaatgtagggaccaaaaacatatttaaccc 12922641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 43979989 - 43980079
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  43979989 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 43980079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 28957401 - 28957310
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  28957401 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 28957310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 31227969 - 31227878
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  31227969 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 31227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 40841892 - 40841983
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| |||||||||||||||||| |||||||    
T  40841892 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacataattaaccc 40841983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 789984 - 789894
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||| | |||||| ||||||||||||||||||||||||||    
T  789984 aaaaatgtagggattttaaaaacattcattgaaatgtatggact-attttcaaaattgcgcaaaatgtagggaccaaaaacatatttaaccc 789894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 21235449 - 21235550
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| |||||||  |||||||||||||    
T  21235449 cactaacggaggaaaaatgtagagattttaaaaacatttattgaaatgtagggact-attatcaaaatcgtgcaaaatgtaggga-gaaaaacatattta 21235546  T
Q  301 accc 304  Q
    ||||    
T  21235547 accc 21235550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 30546146 - 30546236
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||| ||| |||||||||||  ||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  30546146 aaaaatgtagggattttaaaaatattcattgaaatgtagagacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 30546236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 47053852 - 47053760
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||| ||||||||||| ||||||||||||||    
T  47053852 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaaccc 47053760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 2669108 - 2669006
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |   ||||  || ||||||||||||||||||    
T  2669108 cactaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcataaaatataaggaccaaaaacatattta 2669010  T
Q  301 accc 304  Q
    ||||    
T  2669009 accc 2669006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 47058507 - 47058598
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  | |||||   |||||| ||||||||||||||||||||||||||    
T  47058507 aaaaatgtagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaaccc 47058598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 10580122 - 10580040
Alignment:
Q  221 agggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| ||  |||||| ||| |||||||||||||||||||||    
T  10580122 agggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaacc 10580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 38025777 - 38025676
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||| | | |||| |||||||||||| |||||||||    
T  38025777 cactaacgaaggaaaaatgtagggattttaaaattttttattgaaatgtaaggact-attctcaaaattgcgtaaaatgtagggaccaaagacatattta 38025679  T
Q  301 acc 303  Q
    |||    
T  38025678 acc 38025676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 1317494 - 1317582
Alignment:
Q  215 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||| ||||||||| |||||| ||||| ||||||||||||||||||||    
T  1317494 aaatgtaggaattttaaaaacattcattgaaatgtagggact-attttcaaaatcgcgcaaaatgtaggaaccaaaaacatatttaaccc 1317582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 1791389 - 1791465
Alignment:
Q  227 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||||| ||||||||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaacgtaggggccaaaaacatatttaacc 1791465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 46262724 - 46262634
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||  |||||||||||||| ||||||||||| |||||| || ||||||| | |||||| ||||||||||||||||||||||||||    
T  46262724 aaaaatgtagaaattttaaaaacattcattgaaatgtagggactattt-tcaaaattgcgcaaaatgtagggaccaaaaacatatttaaccc 46262634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 54167584 - 54167493
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |  | ||||||  |||||| ||||||||  ||||||||||||||||    
T  54167584 aaaaatgtagggattttaaaaacatttattgaaatataaggactattcttgaaaatcacgcaaaatgtagggacttaaaacatatttaaccc 54167493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 17288374 - 17288464
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |  ||||| | | |||||| |||||||| || ||||||||||||||    
T  17288374 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaaccc 17288464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 214 - 296
Target Start/End: Original strand, 55347970 - 55348051
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacata 296  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| || |||||||||||||||    
T  55347970 aaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgttgggaccaaaaacata 55348051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 54142414 - 54142325
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |  ||||| ||| |||||| |||||||| || |||||||||||||    
T  54142414 aaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgtagggactaataacatatttaacc 54142325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 29691746 - 29691830
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||| ||||| || | ||| ||  |||||| ||| ||||||||||||||||||||||    
T  29691746 tagggattttaaaaacatttattgaaatgtaaagactattttttaaagtcacgcaaaatgtaaggaccaaaaacatatttaaccc 29691830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 12107794 - 12107708
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||||||||||||| ||||||||||| ||||||| | | || |||||||||||| | |||| |||||||||||||||||||||||    
T  12107794 aaaatgtagggattttagaaacatttattaaaatgtaggtatta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaa 12107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 49426353 - 49426443
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |  | ||| | | |||||| |||||||| |||||||||||||||||    
T  49426353 aaaatgtaaggattttaaaaatatttattgaaatgtaaggactattatttaaagtagagcaaaatgtagggacaaaaaacatatttaaccc 49426443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 54143502 - 54143592
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||| |||||||||||||||||||| ||||||| |||||| |  ||||| ||||||||||  ||||||| || ||||||||||||||    
T  54143502 aaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatagggactaataacatatttaaccc 54143592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 7118002 - 7118082
Alignment:
Q  222 gggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||| ||||||||| ||||||||| || ||||| ||| |||||| ||| |||||||||||||||||||||    
T  7118002 gggattttaaaaacatgtattgaaatttaaggactatttttcaaagtcgcgcaaaatgta-ggaccaaaaacatatttaacc 7118082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 5545018 - 5545100
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    |||| |||||||||||||||||||||||||||| |||| || ||||| ||  |||||| ||||| | ||||||||||||||||    
T  5545018 taggcattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacgcaaaatgtaggaagcaaaaacatatttaac 5545100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 17287576 - 17287486
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||| |||||||||| |||||||||||||||||||||| |  | ||| | | |||||| |||||||| || ||||||||||||||    
T  17287576 aaaatgtaggaattttaaaaatatttattgaaatgtaaggactattatttaaagtagcgcaaaatgtagggactaataacatatttaaccc 17287486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 7164989 - 7165080
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattga-aatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||| || ||||||||||||||||| || |||||||||| || ||||||||   | |||||| |||| ||||||||||||||||||||    
T  7164989 aaaaatgtgggaattttaaaaacatttatcgacaatgtaaggattatttctcaaagaagggcaaaatgtagagaccaaaaacatatttaacc 7165080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 48554145 - 48554071
Alignment:
Q  227 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||| |||||||| |||||||||||||| |  ||||| ||  |||||| |||||||||||||||||||||||    
T  48554145 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaa 48554071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 26168245 - 26168165
Alignment:
Q  223 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||| |||||||| ||   ||| |   |||||| ||||||| |||||||||||||||||    
T  26168245 ggattttaaaaacatttattgaaatgcaaggactattttctaaagtaacgcaaaatgtagggatcaaaaacatatttaacc 26168165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 28505638 - 28505686
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaa 258  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  28505638 aggaaaaatatagggattttaaaaacatttattaaaatgtagggactaa 28505686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 49424543 - 49424455
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| |  ||||| | | ||||||  ||||||  ||||| |||||||||    
T  49424543 aaaatgtagggattttaaaaacatttattgatatgtaaagactattattcaaagtagcgcaaaatatagggataaaaaatatatttaac 49424455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 54168823 - 54168914
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| || |  ||||| ||  ||||||  ||||||  |||||||||||||||||    
T  54168823 aaaaatgtagggattttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatatttaaccc 54168914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 3296793 - 3296719
Alignment:
Q  227 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    |||||||||||||||| |||||||||||||| |  ||||| ||  |||||| ||||||| |||||| ||||||||    
T  3296793 tttaaaaacatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaaatatatttaa 3296719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 35166708 - 35166782
Alignment:
Q  227 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    |||||||||||||||| |||||||||||||| |  ||||| ||||  |||| |||||||| ||| ||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactattcttcaaagtcgtataaaatgtagggacgaaagacatatttaa 35166782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 51906677 - 51906737
Alignment:
Q  244 aaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||| |  ||||| || ||||||| ||||||||||||| ||||||||||||    
T  51906677 aaatgtaaggactattcttcaaagtcatgcaaaatgtagggaccaaaatcatatttaaccc 51906737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 5545011 - 5544956
Alignment:
Q  249 taaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||| |  ||||| || ||||||| ||||||||||||||||||||||||||    
T  5545011 taaggactattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccc 5544956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 7118176 - 7118255
Alignment:
Q  225 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||||    
T  7118176 attttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaaccc 7118255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 29691614 - 29691524
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcg-tgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| ||||||||| ||||| |||||  |||| | |||||||  || |||| |||||||||||||||||    
T  29691614 aaaatgtgaggattttaaaaacatttaatgaaatgtagggact-attcttcaaatggatgcaaaatataaggactaaaaacatatttaaccc 29691524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 51906668 - 51906595
Alignment:
Q  227 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||| |||||||| |||||||||||||| |  ||||| ||  |||||  |||||||||||||||||||||||    
T  51906668 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaat-gtagggaccaaaaacatatttaa 51906595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 51906820 - 51906910
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| ||| ||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||||    
T  51906820 aaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaaggactaaaaacatatttaaccc 51906910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 275; Significance: 1e-153; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 884975 - 884681
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  884975 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 884876  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  884875 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 884776  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  884775 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 884681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 28898257 - 28898551
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28898257 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 28898356  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  28898357 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 28898456  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28898457 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 28898551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 1244304 - 1244010
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1244304 acatcatcgctttcggcctccaaatcttcccctctaaatcaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 1244205  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  1244204 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 1244105  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1244104 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 1244010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 41298537 - 41298243
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41298537 acatcatcgctttcggcttccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 41298438  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  41298437 aagatcgtggtgaagttcttcgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttaacaacaaggactatttacactaactc 41298338  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41298337 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 41298243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 33848158 - 33847865
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| || ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||    
T  33848158 acatcatcgctttcggccttcaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacaccggcgatccgcatctacaacgctgcggaga 33848059  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||  ||||||||||||||| |||||||||||||||||| ||||||||||| |||||      
T  33848058 aagatcgtggtgaagttccccgccgtttttcggggagattgaacaaccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacgg 33847959  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||| | ||||  |||||||||||||||||||||||||    
T  33847958 agaaaaaatgtagggattttaaaaacatttattgaaatgtagagact-attctcaaaatcgcgtaaaatatagggaccaaaaacatatttaaccc 33847865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 29784163 - 29784469
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||||||||| ||||||||||    
T  29784163 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagcatgacgaacaacggcgatccgcatctacgacgctgcggaga 29784262  T
Q  110 aagatcgtggtgaagttc------------tccgccgttttcc-ggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggacta 196  Q
    ||||||||||||||||||            ||||||||||| | || ||||||||||||||||||||||||||| |||||||| |||||||||  |||||    
T  29784263 aagatcgtggtgaagttcataaggaagttctccgccgtttttctggtgagattgaaccgccaacattggcatcacgttagaaacttgacaacagagacta 29784362  T
Q  197 tttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacata 296  Q
    ||||| |||||  ||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  29784363 tttacgctaacagaggaaaaatgtagggattttaaaaatatttattgaaatgtaaagact-attctcaaaatcgtgcaaaacgtagggaccaaaaacata 29784461  T
Q  297 tttaaccc 304  Q
    ||||||||    
T  29784462 tttaaccc 29784469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 10 - 303
Target Start/End: Complemental strand, 18443470 - 18443176
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||||||| |||||| |  ||||||| ||||||||||    
T  18443470 acatcatcgctttcggcctccaaatcttcccctctaaaccaatatttttcaccggaagcgtgacgaacaccagcgatctgtgtctacgacgctgcggaga 18443371  T
Q  110 aagatcgtggtgaagttctccgcc--gttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaac 207  Q
    ||||||||||||||| ||   |    ||| |||| |||||||||||||||||||| ||||||| ||||  ||||||||| || ||||||||||| |||||    
T  18443370 aagatcgtggtgaagctcatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaac 18443271  T
Q  208 tcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
      | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  18443270 ggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaacc 18443176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 22954274 - 22954402
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||||    
T  22954274 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcgatccgcatctacgacgctgcggaga 22954373  T
Q  110 aagatcgtggtgaagttctccgccgtttt 138  Q
    |||||||||||||||||| ||||||||||    
T  22954374 aagatcgtggtgaagttccccgccgtttt 22954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 1244443 - 1244533
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  1244443 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 1244533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 18443597 - 18443699
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||| ||||||||||||||||||    
T  18443597 cactaacggaggaaaaatatagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgcaaaatgtaaggaccaaaaacatattta 18443695  T
Q  301 accc 304  Q
    ||||    
T  18443696 accc 18443699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 28898118 - 28898028
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  28898118 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 28898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 41298676 - 41298766
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  41298676 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 41298766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 29784024 - 29783935
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||  ||||| |||||||| ||||||||||||||||    
T  29784024 aaaaatgtaggaattttaaaaacatttattgaaatatagggact-attctcaaaatcgcacaaaatgtagggactaaaaacatatttaacc 29783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 33848296 - 33848387
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| ||||||| |||||||||| |||||||    
T  33848296 gaaaaatgtaggaattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaacaaaaacataattaaccc 33848387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 28838604 - 28838525
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||| ||||||||||| || || |||||||  ||||||| |||||||||||||||||||||||||    
T  28838604 gattttaaaaacatttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaacc 28838525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 210 - 304
Target Start/End: Complemental strand, 22954138 - 22954045
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |   ||||  ||||||| |||||||||||||||||    
T  22954138 aggaaaaatgtagggattttaaaaacatttattaaaatgtagggact-attctcaaaattgcataaaatatagggactaaaaacatatttaaccc 22954045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 20544145 - 20544228
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||||| |||||||| |  | ||| ||  ||||||| ||||||||||||||||||||||||    
T  20544145 tagggattttaaaaacatttattgaaatgcaaggactattgtttaaagtcacgcaaaacttagggaccaaaaacatatttaacc 20544228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 30939563 - 30939655
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||| |  || |||| | | |||| |||||||| |||||||||||||||||    
T  30939563 gaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaaccc 30939655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 49053719 - 49053797
Alignment:
Q  225 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||| || ||||| || ||||| ||   ||||| ||| |||||||||||||||||||||    
T  49053719 attttaaaaacatttattgaaatgcaatgactatttttcaaagtcacccaaaatgtatggaccaaaaacatatttaacc 49053797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 20544321 - 20544398
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||||||||||||| |||||||||||||||| |  ||||||  ||||||||  || |||| ||||||||||||||    
T  20544321 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaaacatatttaa 20544398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 27310138 - 27310095
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggac 255  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||    
T  27310138 gaaaaatgtagggattttaaaaacatttaatgaaatgtagggac 27310095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 10466695 - 10466635
Alignment:
Q  223 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagg 283  Q
    ||||| ||||||||||||||||||||||||||||| || ||||| ||  |||||| |||||    
T  10466695 ggattataaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtagg 10466635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 27311048 - 27311092
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  27311048 aaaaatgtaggaattttaaaaacatttaatgaaatgtagggacta 27311092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 17075618 - 17075708
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| ||||| |||||||||||    
T  17075618 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccc 17075708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 32092317 - 32092227
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| ||||||| | |||||| |  |||||   | |||||| ||| |||| |||||||||||||||||    
T  32092317 aaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaaccc 32092227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 275; Significance: 1e-153; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 3854359 - 3854065
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3854359 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 3854260  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3854259 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 3854160  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3854159 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 3854065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 12089987 - 12089693
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12089987 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 12089888  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  12089887 aaaatcgtggtgaagttctccgccgttttccggggagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 12089788  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12089787 aggaaaaatgtagggattttaaaaacatttattgaaatgtaagaactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaaccc 12089693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 22701805 - 22701515
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22701805 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 22701706  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  22701705 aagatcgtgctgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacattaactc 22701606  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||    
T  22701605 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgt----accaaaaacatatttaaccc 22701515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 1804460 - 1804753
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  1804460 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 1804559  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  1804560 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 1804659  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  1804660 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 1804753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 6476379 - 6476086
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  6476379 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 6476280  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  6476279 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 6476180  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  6476179 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 6476086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 11450984 - 11451277
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  11450984 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 11451083  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  11451084 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 11451183  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  11451184 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 11451277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 27377941 - 27377648
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  27377941 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 27377842  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| |||| ||||||||||| |||||      
T  27377841 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgataacagggactatttacgctaacgg 27377742  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  27377741 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 27377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 34038037 - 34038342
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  34038037 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgcgacgaacaccggtgatccgcatctacgacgctgcggaga 34038136  T
Q  110 aagatcgtggtgaag------------ttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactat 197  Q
    ||||||| |||||||            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  34038137 aagatcgcggtgaagttcatagggaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactat 34038236  T
Q  198 ttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatat 297  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| || |||    
T  34038237 ttacactaactgaggaaaaatgtaggaattttaaaaatatttattgaaatgtaaaaact-attctcaaaatcgtgcaaaacgtagggaccaaatacgtat 34038335  T
Q  298 ttaaccc 304  Q
    |||||||    
T  34038336 ttaaccc 34038342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 10 - 303
Target Start/End: Complemental strand, 26525756 - 26525462
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  26525756 acatcatcgctttcggcctccaaatattcccctctaaaccaacatatttcatcggaagtgtgacgaacagcggcgatccacatctacgacgctgcggaga 26525657  T
Q  110 aagatcgtggtgaagttctccgcc--gttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaac 207  Q
    ||||||||||||||||||   |    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||     
T  26525656 aagatcgtggtgaagttcatagggaagttttccggcgagattgaactgccaacattggcatcacgttagaaatttgacaacagggactatttacactaat 26525557  T
Q  208 tcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    | ||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  26525556 tgaggaaaaatgtagggattttaaaaatatttattgaaatgtaagaact-actctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 26525462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 39096752 - 39097047
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||| |||||||   ||||||| |||||| |||    
T  39096752 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaacaccagcgatccatgtctacgacgctgcgaaga 39096851  T
Q  110 aagatcgtggtgaagttctccgcc--gttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaac 207  Q
    ||||||||||||||| ||   |    ||| |||| |||||||||||||||||||| ||||||| ||||  ||||||||| || ||||||||||| |||||    
T  39096852 aagatcgtggtgaagctcatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaac 39096951  T
Q  208 tcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
      ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||    
T  39096952 ggaggaaaaatgtagggattttaaaaacatttattgaaatgtaagga-ttattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 39097047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 51 - 301
Target Start/End: Original strand, 38110246 - 38110492
Alignment:
Q  51 acatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagttctccgccgttttccggcgagattg 150  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| | |||||| |||||||||| |||| ||| | |||||||| ||| |||||||    
T  38110246 acatatttcactggaaatgtgacaaacaccggtgatccgcatctacgacgatgcggaaaaagatcgtgatgaaattccctgccgtttttcggtgagattg 38110345  T
Q  151 aaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgta 250  Q
    |  ||||||||||||||||| |||| | ||||||||||||||||||||||  |||||  |||||||||||||||||||| ||||||||||   |||||||    
T  38110346 attcgccaacattggcatcacgttaaatatttgacaacatggactatttaagctaacggaggaaaaatgtagggattttgaaaacattta---aaatgta 38110442  T
Q  251 aggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
     ||||||||| ||||||| | | |||| ||||||| |||| ||||||||||    
T  38110443 gggactaatt-tcaaaattgcgtaaaatgtagggatcaaatacatatttaa 38110492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 10708144 - 10708022
Alignment:
Q  182 tgacaacatggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgta 281  Q
    ||||||||||||||||||   |||||  | |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||  | |||||| |||    
T  10708144 tgacaacatggactatttgtgctaacggatgaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactatttgtcaaaagagggcaaaatgta 10708045  T
Q  282 gggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||    
T  10708044 gggaccaaaaacatatttaaccc 10708022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 1804322 - 1804231
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  1804322 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 1804231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 6476517 - 6476608
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  6476517 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 6476608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 3854498 - 3854588
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  3854498 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 3854588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 12090126 - 12090216
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| |||||| | ||||||||||||||||||||||||    
T  12090126 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatgcagggaccaaaaacatatttaaccc 12090216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 39096613 - 39096523
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||  |||||||||||||||||||||||||    
T  39096613 aaaaatgtatggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgcacaaaatatagggaccaaaaacatatttaaccc 39096523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 11450846 - 11450755
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||| |||||||||||||||||||| ||| || |||||||||||| | |||| ||||||||||||||||||||||||||    
T  11450846 gaaaaatgtagggatttttaaaacatttattgaaatgtagggatta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 11450755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 27378079 - 27378170
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||| |||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  27378079 gaaaaatgtagggatttttaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 27378170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 26525895 - 26525984
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||| |||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||| |||||||||||||||||||||||||    
T  26525895 aaaattgtagggattttaaaaacatttattgaaatatagggacta-ttatcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 26525984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 10709567 - 10709474
Alignment:
Q  211 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||  ||||||  ||  |||||||||||||||||||||    
T  10709567 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaaccc 10709474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 39947084 - 39947177
Alignment:
Q  211 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |  ||||| ||   ||||| ||||||||||||||||||||||||||    
T  39947084 ggaaaaatgtacggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatatttaaccc 39947177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 44934682 - 44934774
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   | |||| ||||||||||||||||||||||||||    
T  44934682 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaaccc 44934774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 34037898 - 34037808
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||  ||| |||||||||| ||||||||||    
T  34037898 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attctcaaaatcgcgcaaaatatagagaccaaaaacgtatttaaccc 34037808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 39945934 - 39945841
Alignment:
Q  211 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |  ||||| ||   ||||| || |||||||||||||||||||||||    
T  39945934 ggaaaaatataaggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgttgggaccaaaaacatatttaaccc 39945841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 23221924 - 23221833
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||| ||||||||||||||||||||||| | |||| |  ||||| |||||| ||| ||||||| ||| ||||||||||||||    
T  23221924 aaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaaccc 23221833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 24093412 - 24093329
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||||| |||||||| || ||||| ||   ||||| ||||||| |||||||||||||||||    
T  24093412 tagggattttaaaaacatttattgaaatgcaaggactatttttcaaagtcactcaaaatgtagggatcaaaaacatatttaacc 24093329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 44930073 - 44929982
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |  | |||||     |||| ||||||||||||||||||||||||||    
T  44930073 aaaaatgtagggattttaaaaatatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggaccaaaaacatatttaaccc 44929982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 32861047 - 32861129
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||| ||   ||||| | ||||||||||||||||||||||    
T  32861047 tagggattttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaac 32861129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 210 - 304
Target Start/End: Original strand, 18107422 - 18107516
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| || |  | ||| ||  |||||| | |||||| |||||||||||||||||    
T  18107422 aggaaaaatttagggattttaaaaacatttattaaaatgtaaggattattctttaaagtcacgcaaaatgcagggactaaaaacatatttaaccc 18107516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 23222864 - 23222954
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  ||||||||||||||| ||||||||||||||||||| |  | ||| | | |||||| |||||||| |||||||||||||||||    
T  23222864 aaaatgtgaggattttaaaaacatatattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaaccc 23222954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 18105831 - 18105723
Alignment:
Q  188 catggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggacc 287  Q
    |||| ||||||||  |||||  |||||||||||||| ||||||||||| |||||||||||||| ||| || |  |||||||||   ||||  ||||||||    
T  18105831 catgaactatttatgctaacagaggaaaaatgtaggaattttaaaaacctttattgaaatgtagggaatattcttcaaaatcgcataaaatttagggacc 18105732  T
Q  288 aaaaacata 296  Q
    |||||||||    
T  18105731 aaaaacata 18105723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 2035697 - 2035607
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||| ||||||| ||| || |  | ||||  | | ||||  |||||||||||||||||||||||||    
T  2035697 aaaatgtagggattttaaaaacatttattaaaatgtagggattattctttaaaagagggtaaaatatagggaccaaaaacatatttaaccc 2035607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 10710828 - 10710914
Alignment:
Q  211 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatat 297  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||| |  ||||| ||  ||||||  || |||||||||||||||    
T  10710828 ggaaaaatgtaggaattttaaaaacatttattgaaatgcaagggctattcttcaaagtcacgcaaaatataaggaccaaaaacatat 10710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 22704429 - 22704475
Alignment:
Q  258 attctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  22704429 attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 22704475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 2191306 - 2191217
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |  |||||   | |||||| ||| |||| ||||||||||||||||    
T  2191306 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaacc 2191217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 21182385 - 21182306
Alignment:
Q  225 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||| |||||||||||||||| |  |||||   | |||||| ||| |||| |||||||||||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaaccc 21182306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 2036604 - 2036694
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||| |  | ||||  ||| |||| |||||||  || ||||||||||||||    
T  2036604 aaaatatagggattttaaaaacattaattgaaatgtagggactattctttaaaaaggtgtaaaatgtagggattaataacatatttaaccc 2036694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 2191466 - 2191392
Alignment:
Q  227 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    |||||||||||||||| ||||||||||| || |  ||||| ||  |||||| ||| |||||||||||||||||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaa 2191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 21217322 - 21217412
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||||    
T  21217322 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaaccc 21217412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 21265080 - 21264990
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||||    
T  21265080 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaaccc 21264990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 10711000 - 10711093
Alignment:
Q  211 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||| |||||||||||| ||||| | |||||||||||||| || | |||     | ||||  |||||||||||||||||||||||||    
T  10711000 ggaaaaatgtaaggattttaaaaatatttactaaaatgtaaggactattttttaaagaaaagtaaaatatagggaccaaaaacatatttaaccc 10711093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 22701945 - 22701982
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgta 250  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22701945 aaaaatgtagggattttaaaaacattcattgaaatgta 22701982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 3624925 - 3625004
Alignment:
Q  225 attttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| |||||| |  ||||| ||   ||||| ||| | ||| ||||||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaagtccgtcaaaatgtaagaaccgaaaacatatttaaccc 3625004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 2517579 - 2517641
Alignment:
Q  236 atttattgaaatgtaaggactaattctcaa-aatcgtgcaaaacgtagggaccaaaaacatat 297  Q
    |||||||||||||||||||||| || |||| | || ||||||| ||| |||||||||||||||    
T  2517579 atttattgaaatgtaaggactatttttcaatagtcatgcaaaatgtatggaccaaaaacatat 2517641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 7083736 - 7083694
Alignment:
Q  262 tcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||| || ||||||| ||||||||||||||||||||||||||    
T  7083736 tcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccc 7083694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 21217012 - 21216922
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| ||||| |||||||||||    
T  21217012 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccc 21216922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 21265390 - 21265480
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| ||||| |||||||||||    
T  21265390 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccc 21265480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 24093236 - 24093155
Alignment:
Q  223 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||| ||||||||| |||||| |  |||||   | |||||  ||| |||| |||||||||||||||||    
T  24093236 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaaacatatttaaccc 24093155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 45230422 - 45230128
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45230422 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 45230323  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  45230322 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 45230223  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45230222 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatagtgcaaaacgtagggaccaaaaacatatttaaccc 45230128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 30427966 - 30427672
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30427966 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 30427867  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  30427866 aagatcgtggtgaagttctccgccgtttcccggcgagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacactaactc 30427767  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30427766 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 30427672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 17968265 - 17968559
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17968265 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 17968364  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||| ||||||| |||||||    
T  17968365 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgtcaacattgacatcacgttagaaatttgacaacagggattatttacgctaactc 17968464  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17968465 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaagactaattctcaaaatcgtgcaaaacgtatggaccaaaaacatatttaaccc 17968559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 47410651 - 47410944
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| | ||||||||    
T  47410651 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcgatccgcatctacgacgttgcggaga 47410750  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||      
T  47410751 aagatcgtggtgaagttccccgccgtttttcggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacgg 47410850  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  47410851 agaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 47410944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 32266775 - 32266482
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| | ||||||||    
T  32266775 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacactggcgatccgcatctacgacgttgcggaga 32266676  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  32266675 aagaccgtggtgaagttccccgccgttttccagcgagattgaaccaccaacattgacatcacgttagaaatttgacaacaaggactatttacgctaacgg 32266576  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  32266575 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 32266482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 9122977 - 9122684
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||| ||||  ||||    
T  9122977 acatcatcgcttttggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcgatccacatctacgacgctgtagaga 9122878  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||      
T  9122877 aagatcgtggtgaagttccccgtcgtttttcggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagtgactatttacgctaacgg 9122778  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||| || |||||||||||||||||||||||    
T  9122777 agaaaaaatgtagggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgcgtaaaatgtggggaccaaaaacatatttaaccc 9122684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 40124368 - 40124075
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| | ||||||||    
T  40124368 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatctgcatctacgacgttgcggaga 40124269  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  40124268 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 40124169  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  | |||| ||| ||||||||||||||||||||||    
T  40124168 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcaagtaaaatgtaaggaccaaaaacatatttaaccc 40124075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 46802614 - 46802321
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||  |||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| | ||||||||    
T  46802614 acatcatcgctttcggcctccaaatcttcatctctaaaccaacatatttcagtggaaatgtgacgaaaaccggcgatccgcatctacgacgatgcggaga 46802515  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||||      
T  46802514 aagaccgtggtgaagttccccgccattttccggcgagattgaaccgccaacattggcatcacgttaaaaatttgacaacagggactatttacgctaacag 46802415  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| | |||| || |||||||||||||||||||||||    
T  46802414 aggaaaaatgtagggattttaaaaacttttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtggggaccaaaaacatatttaaccc 46802321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 17968126 - 17968036
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  17968126 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 17968036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 32266913 - 32267004
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  32266913 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 32267004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 45230561 - 45230651
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  45230561 aaaaatatagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 45230651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 30428105 - 30428194
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||| ||||||||||| | |||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  30428105 aaaaatgtagggattttaaaaacattcattgaaatgtaggaacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaacc 30428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 40124506 - 40124597
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| |||||||||||||| |||||||||||    
T  40124506 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaatatatttaaccc 40124597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 46802741 - 46802843
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||| ||  |||| ||||||||||||||||||||||    
T  46802741 cactaacgaaggaaaaatgtagggattttaaaaacatttattaaaatgtagggact-attttcaaaattgtataaaatgtagggaccaaaaacatattta 46802839  T
Q  301 accc 304  Q
    ||||    
T  46802840 accc 46802843  T

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Target: chr1; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 47410524 - 47410422
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |   ||||  |||||||||||||||||||||    
T  47410524 cactaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcataaaatatagggaccaaaaacatattta 47410426  T
Q  301 accc 304  Q
    ||||    
T  47410425 accc 47410422  T

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Target: chr1; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 210 - 303
Target Start/End: Original strand, 9123113 - 9123205
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |   |||| |||||||||||||||||||||||||    
T  9123113 aggaaaaatgtagggattttaaaaacatttattgaaatgtagagact-attctcaaaattgcataaaatgtagggaccaaaaacatatttaacc 9123205  T

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Target: chr1; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 3591171 - 3591254
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| ||  ||| || |||||||||||||||||||||||||    
T  3591171 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcacaatgtagggaccaaaaacatatttaacc 3591254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 211 - 303
Target Start/End: Complemental strand, 8997432 - 8997340
Alignment:
Q  211 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggac-caaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||  |||||||  ||||||||||||||||    
T  8997432 ggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcacaaaatatagggacaaaaaaacatatttaacc 8997340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 1500980 - 1501072
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |  ||||||  | ||||||  ||||||| |||||||||||||||||    
T  1500980 gaaaaatgtagggattttaaaaacatttaatgaaatgtagggactattcttcaaaagagcgcaaaatatagggactaaaaacatatttaaccc 1501072  T

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Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 19895656 - 19895573
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||||| || ||||| || ||||| ||  ||||||  ||| ||||||||||||||||||||    
T  19895656 tagggattttaaaaacatttattgaaatgcaaagactatttttcaaagtcacgcaaaatatagagaccaaaaacatatttaacc 19895573  T

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Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 36793574 - 36793665
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||| |||||||  ||||| |  ||||| ||  ||||||  ||||||| |||||||||||||||||    
T  36793574 aaaaatgtagggattttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatatttaaccc 36793665  T

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Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 8998194 - 8998264
Alignment:
Q  172 gttagaaatttgacaacatggactatttacactaactcaggaaaaatgtagggattttaaaaacatttatt 242  Q
    ||||||||||||||| ||  |||||||||| |||||  ||||||| |||||||||||||||||||||||||    
T  8998194 gttagaaatttgacagcagagactatttacgctaacgaaggaaaactgtagggattttaaaaacatttatt 8998264  T

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Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 37717797 - 37717885
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||| ||| ||||||||||||| |||||||||||||||||||| ||| ||||| | | | |||| |||||||| ||||||||||||||||    
T  37717797 aaaaagtaaggattttaaaaacctttattgaaatgtaaggact-attttcaaagttgcgtaaaatgtagggactaaaaacatatttaacc 37717885  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 50359290 - 50359357
Alignment:
Q  236 atttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||| || ||||| ||  ||| || |||||||||||||||||||||||||    
T  50359290 atttattgaaatgtaaggactatttttcaaagtcacgcagaatgtagggaccaaaaacatatttaacc 50359357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 18180131 - 18180052
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||| ||||||||||||| |||||||  || ||||| ||  |||||| |||| ||| ||||||||||||||||    
T  18180131 gattttaaaaatatttattgaaatgcaaggactgtttttcaaagtcacgcaaaatgtagtgactaaaaacatatttaacc 18180052  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 45664777 - 45664686
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||| ||||||||||||||||||||| |||||||  ||||| |  |||||   | | |||| |||||||| |||||||||||||||||    
T  45664777 aaaaatgtggggattttaaaaacatttattaaaatgtagagactattcttcaaatgagcgtaaaatgtagggactaaaaacatatttaaccc 45664686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 224 - 302
Target Start/End: Complemental strand, 5683413 - 5683335
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    ||||||||||||||||||||||||| |||||| | || ||||| ||  |||||| |||| |||||| || |||||||||    
T  5683413 gattttaaaaacatttattgaaatgcaaggacaatttttcaaattcacgcaaaatgtagagaccaataatatatttaac 5683335  T

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Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 304
Target Start/End: Original strand, 12869663 - 12869745
Alignment:
Q  222 gggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||| |||||| |  | |||   | | ||||  |||||||||||||||||||||||||    
T  12869663 gggattttaaaaacatttattgaaatgtagggactattctttaaaggagggtaaaatatagggaccaaaaacatatttaaccc 12869745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 18179968 - 18179878
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||| ||| |||||| ||||||||| || |||||   |||||||| ||| |||| |||||||| ||||||||    
T  18179968 aaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttcaaaggggtgcaaaatgtaaggactaaaaacatgtttaaccc 18179878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 31889519 - 31889433
Alignment:
Q  218 tgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||| |||||||||||||| ||||| ||  ||||| || ||||||| | || ||  || ||||||||||||||    
T  31889519 tgtagggattttaaaaacgtttattgaaatgtagggactgatattcaaagtcttgcaaaatgcagagatgaataacatatttaaccc 31889433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 304
Target Start/End: Complemental strand, 12868521 - 12868432
Alignment:
Q  215 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||| ||||||||||||||| | |||| |  | |||   | | |||| ||||||||||| ||||||||||||||    
T  12868521 aaatgtagggattttaaaaatatttattgaaatgtaggaactattctttaaaggagggtaaaatgtagggaccaataacatatttaaccc 12868432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 36792329 - 36792239
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||| ||||||||||||||||| || ||| || |  | ||||||  |||||| ||||| ||  ||||||||||||||||    
T  36792329 aaaaatgtagggatttt-aaaacatttattgaaatatagggattattcttgaaaatcacgcaaaatgtaggaacttaaaacatatttaaccc 36792239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 5172834 - 5172744
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||| |||||||||||||||||| |||||||||  ||||| |  |||||   | |||||| ||| | || |||||||||||||||||    
T  5172834 aaaatgtaaggattttaaaaacatttaatgaaatgtagagactattcttcaaatgagcgcaaaatgtaagaactaaaaacatatttaaccc 5172744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 1500150 - 1500105
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||    
T  1500150 gaaaaatatagggattttaaaaacattcaatgaaatgtagggacta 1500105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 268; Significance: 1e-149; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 10 - 301
Target Start/End: Complemental strand, 33107222 - 33106931
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33107222 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 33107123  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  33107122 aagatcgtggtgaagttctccaccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 33107023  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33107022 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 33106931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 15148010 - 15147717
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  15148010 acatcatcgctttcggcctcaaaatcttcccctctaaaccaacatatttcactggaaatctgacgaacaccggcgatccgcatctacgatgctgcggaga 15147911  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||      
T  15147910 aagatcgtggtaaagttccccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacgg 15147811  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| | |||| ||||||||||||||||||||||||||    
T  15147810 aggaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctctaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 15147717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 14257439 - 14257146
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| ||||||||||    
T  14257439 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacaaacagtggcgatccgcatctacgacgctgcggaga 14257340  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  14257339 aagatcgtggtgaagttccccgccgtttttcggcgagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 14257240  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  14257239 agaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 14257146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 20824456 - 20824163
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  20824456 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 20824357  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  20824356 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 20824257  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20824256 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgtgtaaaatgtagggaccaaaaacatatttaaccc 20824163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 302
Target Start/End: Complemental strand, 6162549 - 6162246
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  6162549 acatcatcactttcggcctccaaatctttccctctaaaccaacatatttcactggaagcgtgacgaacaccgacgatccgcatctacgacgctgcggaga 6162450  T
Q  110 aagatcgtggtgaagttc------------tccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactat 197  Q
    ||||||||||||||||||            || ||||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  6162449 aagatcgtggtgaagttcataaggaagttctctgccgttttccggcaagattaaaccgccaatattggcatcacgttagaaatttgacaacatggactat 6162350  T
Q  198 ttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatat 297  Q
    |||| |||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||    
T  6162349 ttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaatgact-attctcaaaattgtgcaaaacgtagggacaaaaaacatat 6162251  T
Q  298 ttaac 302  Q
    |||||    
T  6162250 ttaac 6162246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 34984408 - 34984283
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34984408 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 34984309  T
Q  110 aagatcgtggtgaagttctccgccgt 135  Q
    |||||| |||||||||||||||||||    
T  34984308 aagatcatggtgaagttctccgccgt 34984283  T

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Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 20228194 - 20228325
Alignment:
Q  172 gttagaaatttgacaacatggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgt 271  Q
    ||||||||||||||| || ||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||    
T  20228194 gttagaaatttgacagcagggactatttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgtaggaact-attctcaaaattgt 20228292  T
Q  272 gcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    | |||  | ||||||||| ||||||||||||||    
T  20228293 gaaaattgcagggaccaataacatatttaaccc 20228325  T

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Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 22122178 - 22122309
Alignment:
Q  172 gttagaaatttgacaacatggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgt 271  Q
    ||||||||||||||| || ||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||    
T  22122178 gttagaaatttgacagcagggactatttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgtaggaact-attctcaaaattgt 22122276  T
Q  272 gcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    | |||  | ||||||||| ||||||||||||||    
T  22122277 gaaaattgcagggaccaataacatatttaaccc 22122309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 33107361 - 33107451
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  33107361 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 33107451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 6162688 - 6162776
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  6162688 aaaaatgtagggattttaaaaacatttattgaaatgtagagact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 6162776  T

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Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 20824594 - 20824685
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  20824594 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 20824685  T

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Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 34984545 - 34984634
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  34984545 aaaaatgtagg-attttaaaaacatttattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 34984634  T

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Target: chr6; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 20227809 - 20227923
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| |||| || ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |  |||| || ||||| ||||    
T  20227809 acatcatcgcttttggactccaaatcctcccctctaaaccaacaaatttcactggaagcgtgacgaacaccggcgatctgtgtctatgacgctgcagaga 20227908  T
Q  110 aagatcgtggtgaag 124  Q
    |||||| ||||||||    
T  20227909 aagatcatggtgaag 20227923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 22121793 - 22121907
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| |||| || ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |  |||| || ||||| ||||    
T  22121793 acatcatcgcttttggactccaaatcctcccctctaaaccaacaaatttcactggaagcgtgacgaacaccggcgatctgtgtctatgacgctgcagaga 22121892  T
Q  110 aagatcgtggtgaag 124  Q
    |||||| ||||||||    
T  22121893 aagatcatggtgaag 22121907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 14257566 - 14257668
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |   ||||  |||||||||||||||||||||    
T  14257566 cactaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcataaaatatagggaccaaaaacatattta 14257664  T
Q  301 accc 304  Q
    ||||    
T  14257665 accc 14257668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 14712913 - 14712830
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |   |||||| |||||||||||||||||||||||||    
T  14712913 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaacc 14712830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 210 - 304
Target Start/End: Original strand, 15148146 - 15148239
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||||| | | ||||  |||||||||||||||||||||||||    
T  15148146 aggaaaaatgtagggattttaaaatcatttattgaaatgtagggact-attatcaaaattgcgtaaaatatagggaccaaaaacatatttaaccc 15148239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 20522157 - 20522246
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |  |||||||||| ||||| ||||| ||||||||||||||||||||    
T  20522157 aaaatgtagtgattttaaaaacatttattgaaatgtagggactattcttcaaaatcgt-caaaatgtaggaaccaaaaacatatttaaccc 20522246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 8710341 - 8710431
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| |  |||||   ||||||||  || |||| |||||||||||||||||    
T  8710341 aaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaaccc 8710431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 8709601 - 8709678
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||       |||||| |||||||||||||||||||||||||    
T  8709601 tagggattttaaaaacagttattaaaatgtaaggactatttctca------cgcaaaatgtagggaccaaaaacatatttaacc 8709678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 5974100 - 5974010
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||| |  |||||   ||||||||  || |||| |||||||||||||||||    
T  5974100 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaaccc 5974010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 19595650 - 19595740
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||| |  | ||||  |||||||| ||| |||| || ||||||||||||||    
T  19595650 aaaatatagggattttaaaaatatttattgaaatgtagggactattctttaaaaaggtgcaaaatgtatggactaataacatatttaaccc 19595740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 21113279 - 21113202
Alignment:
Q  226 ttttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||| ||||||||||||| || ||||| || ||||| ||  |||||||||||||| |||| ||||||||||||    
T  21113279 ttttaaaaatatttattgaaatgcaatgactatttttcaaagtcacgcaaaacgtagggatcaaagacatatttaacc 21113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 20227146 - 20227059
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    |||||| |||| |||||||||| |||||||||||| || | ||| ||||||||||||| ||||||  ||| || |||||| ||||||||    
T  20227146 aaaaatataggaattttaaaaatatttattgaaatataggaact-attctcaaaatcgcgcaaaatatagagagcaaaaatatatttaa 20227059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 22121130 - 22121043
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    |||||| |||| |||||||||| |||||||||||| || | ||| ||||||||||||| ||||||  ||| || |||||| ||||||||    
T  22121130 aaaaatataggaattttaaaaatatttattgaaatataggaact-attctcaaaatcgcgcaaaatatagagagcaaaaatatatttaa 22121043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 20521278 - 20521231
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    ||||||| |||||||||||||||||||||| ||||||| || ||||||    
T  20521278 aggaaaattgtagggattttaaaaacattttttgaaatatagggacta 20521231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 211530 - 211440
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  ||||||||||| |||||| ||||||||| |||||| |  |||||   | |||||| ||| |||| |||||||||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaaccc 211440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 19579203 - 19579237
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatg 248  Q
    ||||| |||||||||||||||||||||||||||||    
T  19579203 aaaatatagggattttaaaaacatttattgaaatg 19579237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 267; Significance: 1e-148; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 34949984 - 34950278
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34949984 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 34950083  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34950084 aagatcgtggtgaagttctccgccgttttccggggagattggaccgccaacattggcatcatgttagaaatttgacaacagggactatttacactaactc 34950183  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34950184 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaattgtgcaaaacgtagggaccaaaaacatatttaaccc 34950278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 22407135 - 22406841
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  22407135 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 22407036  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  22407035 aagttcgtggtgaagttctccgccattttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 22406936  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22406935 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtaaggaccaaaaacatatttaaccc 22406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 27475526 - 27475820
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27475526 acatcatcgctttcggcctccaaatcttcccctctaaatcaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 27475625  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  27475626 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 27475725  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  27475726 aggaaaaatgtagggattttaaaaacatttattgaaatataaggactaattctcaaaatcgtgtaaaacttagggaccaaaaacatatttaaccc 27475820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 42606572 - 42606279
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||||    
T  42606572 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggcgatccgcatctacgacgctgcggaga 42606473  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||      
T  42606472 aagatcgtggtgaagttccccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacgg 42606373  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| |||||||||||||||| |||||||||    
T  42606372 agaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacaaatttaaccc 42606279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 36899546 - 36899253
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  || ||||||||||||||| |||| |||||    
T  36899546 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtggtgatccgcatctacgacgctgaggaga 36899447  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||      
T  36899446 aagatcgtggtgaaattctccgccgtttttcggcgagattgaaccgccaacattgacatcacgttagaaatttgacaacagggactatttacactaacgg 36899347  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  36899346 agaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 36899253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 45539437 - 45539730
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  45539437 acatcattgctttcggcctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacaacggcgatccgcatctacgacgctgcggaga 45539536  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||      
T  45539537 aagatcgtggtgaagttccctgccgttttccggggagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacgg 45539636  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    || |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| ||||||||||||||||||||||||||    
T  45539637 agaaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 45539730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 2388924 - 2388636
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||| ||||||||||    
T  2388924 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacggtggcgatccgcatctacgacgctgcggaga 2388825  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||      
T  2388824 aagatcgtggtgaagttccccgccgtttttcggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttaagctaacgg 2388725  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattt 299  Q
    || ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||| | |||| |||||||||||||||||||||    
T  2388724 agaaaaaatgtagggattttaaaaacatttattgaaatgtagagact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatattt 2388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 46689974 - 46689681
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||  ||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||   ||||||||    
T  46689974 acatcatcgctttcgacctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaacaccggcgatccgcatctacgacattgcggaga 46689875  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  46689874 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 46689775  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||   |||| ||||| ||||||||||||||||||||    
T  46689774 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcataaaatgtaggaaccaaaaacatatttaaccc 46689681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 4199747 - 4199452
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||||||| |||||| |  ||||||| ||||||||||    
T  4199747 acatcatcgctttcggcctccaaatcttcccctctaaaccaatatttttcaccggaagcgtgacgaacaccagcgatctgtgtctacgacgctgcggaga 4199648  T
Q  110 aagatcgtggtgaagttctccgcc--gttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaac 207  Q
    ||||||||||||||| ||   |    ||| |||| |||||||||||||||||||| ||||||| ||||  ||||||||| || ||||||||||| |||||    
T  4199647 aagatcgtggtgaagctcatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaac 4199548  T
Q  208 tcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
      | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  4199547 ggatgaaaaatgtagggattttaaaaacatttattgaaatataaggact-attctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 4199452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 4199874 - 4199976
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  4199874 cactaacggaggaaaaatatagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatattta 4199972  T
Q  301 accc 304  Q
    ||||    
T  4199973 accc 4199976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 34949845 - 34949755
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  34949845 aaaaatgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 34949755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 46690112 - 46690203
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  46690112 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 46690203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 27475475 - 27475389
Alignment:
Q  217 atgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  27475475 atgtagggattttaaaaacattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 27475389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 45539299 - 45539208
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| |||||||||||||||||| |||||||    
T  45539299 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacataattaaccc 45539208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 22407274 - 22407364
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||| | |||||| ||||||||||||||||||||||||||    
T  22407274 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attttcaaaattgcgcaaaatgtagggaccaaaaacatatttaaccc 22407364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 42606699 - 42606801
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| |   |||| ||||||||||||||||||||||    
T  42606699 cactaacgaaggaaaaatgtagggattttaaaaatatttattgaaatgtagggact-attctcaaaattgcataaaatgtagggaccaaaaacatattta 42606797  T
Q  301 accc 304  Q
    ||||    
T  42606798 accc 42606801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 20826819 - 20826727
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   | |||| ||||||||||||||||||||||||||    
T  20826819 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaaccc 20826727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 2389051 - 2389153
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |   ||||  |||||||||||||||||||||    
T  2389051 cactaacgaaggaaaaatgtagggattttaaaaacatttattaaaatgtagggact-attctcaaaattgcataaaatatagggaccaaaaacatattta 2389149  T
Q  301 accc 304  Q
    ||||    
T  2389150 accc 2389153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 36899673 - 36899775
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| |   ||||  |||||||||||||||||||||    
T  36899673 cactaacgaaggaaaaatatagggattttaaaaacatttattgaaatgtagggact-attctcaaaattgcataaaatatagggaccaaaaacatattta 36899771  T
Q  301 accc 304  Q
    ||||    
T  36899772 accc 36899775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 20831101 - 20831192
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  | |||||     |||| ||||||||||||||||||||||||||    
T  20831101 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgagaaaaaatgtagggaccaaaaacatatttaaccc 20831192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 48868588 - 48868678
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |  ||||| | | |||||| |||||||| || ||||||||||||||    
T  48868588 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaaccc 48868678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 25770577 - 25770494
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||||||  |||||| ||| |||  ||||||||||||||||    
T  25770577 tagggattttaaaaacatttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaacc 25770494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 35300835 - 35300743
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||| |       |||| ||||||||||||||||||||||||||    
T  35300835 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggattatttgtcagagaatgataaaatgtagggaccaaaaacatatttaaccc 35300743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 44504344 - 44504265
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||  |||||| ||| | | |||||||||||||||||    
T  44504344 gattttaaaaacatttattgaaatgcaaggactaattttcaaagtcacgcaaaatgtaagaatcaaaaacatatttaacc 44504265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 9218348 - 9218431
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||| ||||||||||||||||||| ||  |||| || ||||| ||  |||||| ||||||| |||||||||||||||||    
T  9218348 tagggatttaaaaaacatttattgaaatgcaaatactatttttcaaagtcacgcaaaatgtagggagcaaaaacatatttaacc 9218431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 37172337 - 37172254
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||| |||||||||||||| ||||||| |||||| || || ||||| ||  |||||| ||| |||||||||||||||||||||    
T  37172337 taggggttttaaaaacatttgttgaaatctaaggattatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaacc 37172254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 27013657 - 27013583
Alignment:
Q  228 ttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    |||||||||| |||| |||||||||||||| |  ||||||||  |||||| ||| ||||||||||||||||||||    
T  27013657 ttaaaaacatatattaaaatgtaaggactattcttcaaaatcacgcaaaatgtaaggaccaaaaacatatttaac 27013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 44504387 - 44504477
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |  |||||   |||||||| ||| |||| ||||||| |||||||||    
T  44504387 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaacacatttaaccc 44504477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 48867739 - 48867649
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||| |||||||||||| ||||||||||||||| |||||| |  | ||| | | |||||| |||||||| || ||||||||||||||    
T  48867739 aaaatgtaaggattttaaaaatatttattgaaatgtagggactattatttaaagtagcgcaaaatgtagggactaataacatatttaaccc 48867649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 54588546 - 54588458
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgc--aaaacgtagggaccaaaaacatatttaa 301  Q
    |||||||||| |||||||||||||||||||||||||| |||||| |  ||||| || |||  |||| ||||||||| |||||||||||||    
T  54588546 aaaatgtaggaattttaaaaacatttattgaaatgtatggactattcttcaaagtc-tgccaaaaatgtagggaccgaaaacatatttaa 54588458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 132069 - 132150
Alignment:
Q  223 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||| |||||||||||||||| |  |||||   |||||||| ||| |||| ||| |||||||||||||    
T  132069 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaaccc 132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 3799811 - 3799722
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||| | |||||||  ||||| || ||||||  | | |||| |||||||| ||||| ||||||||||    
T  3799811 aaaatgtagggattttaaaaacatttacttaaatgtagagactatttatcaaaagagcgtaaaatgtagggactaaaaagatatttaacc 3799722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 131948 - 132027
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||| ||||||||||||||||||||  | ||||| || ||||| | ||||| |||||||| | ||||||||    
T  131948 gattttaaaaacacttattgaaatgtaaggactatatttcaaagtcatgcaacatgtaggaaccaaaaataaatttaacc 132027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 47342835 - 47342745
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||| ||| ||||||||||||||||| | ||||||| |||||| || ||||||| | | ||||  |||| || |||||||||||||||||    
T  47342835 aaaatatagtgattttaaaaacatttacttaaatgtagggactatttatcaaaatagcgtaaaatttaggaactaaaaacatatttaaccc 47342745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 50732437 - 50732367
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaa 290  Q
    |||||||||| |||||||||||||||||| || ||||| || | ||| || ||||||| ||||||||||||    
T  50732437 tagggattttgaaaacatttattgaaatgcaaagactatttttaaaagtcatgcaaaatgtagggaccaaa 50732367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 50780418 - 50780488
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaa 290  Q
    |||||||||| |||||||||||||||||| || ||||| || | ||| || ||||||| ||||||||||||    
T  50780418 tagggattttgaaaacatttattgaaatgcaaagactatttttaaaagtcatgcaaaatgtagggaccaaa 50780488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 7248488 - 7248533
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||||    
T  7248488 gaaaaatgtagggattttaaaaatatttattaaaatgtgaggacta 7248533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 26741138 - 26741210
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaa 292  Q
    ||||| ||||||| ||||||||||||||||||||| || || ||||| ||  |||||| ||||||| ||||||    
T  26741138 tagggtttttaaagacatttattgaaatgtaaggattatttttcaaagtcacgcaaaatgtagggagcaaaaa 26741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 51587619 - 51587575
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||    
T  51587619 aaaaatatagggattttaaaaatatttattgaaatgtaatgacta 51587575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 33225577 - 33225490
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||| ||||||||||||||||||| | ||||||| |||||| || |||||   | | |||| |||| ||| ||||||||||||||    
T  33225577 aaaatgtggggattttaaaaacatttacttaaatgtagggactatttatcaaaggagcgtaaaatgtagagactaaaaacatatttaa 33225490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 47343726 - 47343779
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaa 267  Q
    ||||||||||||||||||||||||||| | |||||||  ||||| || ||||||    
T  47343726 aaaatgtagggattttaaaaacatttacttaaatgtagagactatttatcaaaa 47343779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 3879065 - 3878771
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  3879065 acatcatcactttcagcctccaaatcttcccctctaaatcaacatatttcaccggaagtgtgatgaacaccggcgatccgcatctacgaagctgcggaga 3878966  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3878965 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 3878866  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3878865 aggaaaaatatagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 3878771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 31093288 - 31092994
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31093288 acatcatcgctttcggccttcaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 31093189  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31093188 aagttcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacactaactc 31093089  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31093088 aagaaaaatgtagggattttaaaaacatctattgaaatgtaaggactaattctcaaaatcgtgcaaaacgttgggaccaaaaacatatttaaccc 31092994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 10 - 303
Target Start/End: Complemental strand, 21949692 - 21949400
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||| ||||||||||    
T  21949692 acatcatcgctttcgacctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacagcggcgattcgcatctacgacgctgcggaga 21949593  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||      
T  21949592 aagatcgtggtgaagttccccgccgttttccggggagattgaaccgccaacattggcatcacgttagaaatttgacaacagggactatttacgctaacgg 21949493  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| |||||||||||||||||||||||||    
T  21949492 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacc 21949400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 5746989 - 5747282
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  5746989 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 5747088  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| |||| ||||||||||| |||||      
T  5747089 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgataacagggactatttacgctaacgg 5747188  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  5747189 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 5747282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 6543707 - 6543414
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| | ||||||||    
T  6543707 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacactggcgatccgcatctacgacgttgcggaga 6543608  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  6543607 aagaccgtggtgaagttccccgccgttttccagcgagattgaaccaccaacattgacatcacgttagaaatttgacaacaaggactatttacgctaacgg 6543508  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  6543507 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 6543414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 28641389 - 28641682
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||    
T  28641389 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccggcgatccgcatctacgacgttgcggaga 28641488  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||| ||||||||||| |||||      
T  28641489 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacattagaaatttgacaacagggactatttacgctaacgg 28641588  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| |||||||||||| |||||||||||||    
T  28641589 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaacacatatttaaccc 28641682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 31162713 - 31162420
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||| | ||||||||    
T  31162713 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacaccgacgatctgcatctacgacgttgcggaga 31162614  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  31162613 aagaccgtggtgaagttccccgccgttttccggcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 31162514  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  | |||| ||||||||||||||||||||||||||    
T  31162513 aggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcacgtaaaatgtagggaccaaaaacatatttaaccc 31162420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 10 - 304
Target Start/End: Complemental strand, 3192092 - 3191797
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||   ||||||| |||||| |||    
T  3192092 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacaaacaccggcgatccatgtctacgacgctgcgaaga 3191993  T
Q  110 aagatcgtggtgaagttctccgcc--gttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaac 207  Q
    ||||| ||||| ||| ||   |    ||| |||| |||||||||||||||||||| ||||||| ||||  ||||||||| || ||||||||||| |||||    
T  3191992 aagattgtggtaaagctcatagagaagttctccgccgagattgaaccgccaacatcggcatcaagttaataatttgacagcagggactatttacgctaac 3191893  T
Q  208 tcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
      ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  3191892 ggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgtgcaaaatgtagggactaaaaacatatttaaccc 3191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 39402440 - 39402735
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||  |||||||   ||| ||||    
T  39402440 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccgaaagcgtgacgaacaccgacgatccgtgtctacgacattgcagaga 39402539  T
Q  110 aagatcgtggtgaagttctccgcc--gttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaac 207  Q
    ||||||||||||||| ||   |    ||| |||| |||||||||||||||||||| ||||||| ||||| ||||||||| || ||||||||||| ||| |    
T  39402540 aagatcgtggtgaagctcatagtgaagttctccgccgagattgaaccgccaacatcggcatcaagttagtaatttgacagcagggactatttacgctacc 39402639  T
Q  208 tcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  39402640 ggaggaaaaatgtagggattttaaaaatatttattgaaatgtaaggact-attctcaaaatcgtgtaaaatgtagggaccaaaaacatatttaaccc 39402735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 39402313 - 39402211
Alignment:
Q  201 cactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  39402313 cactaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgcaaaatgtagggaccaaaaacatattta 39402215  T
Q  301 accc 304  Q
    ||||    
T  39402214 accc 39402211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 31162851 - 31162942
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  31162851 gaaaaatgtagggattttaaaaacatttattgaaatgtaagga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 31162942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 3192231 - 3192321
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||  |||||||||||||||||||||||||    
T  3192231 aaaaatgtagggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgcacaaaatatagggaccaaaaacatatttaaccc 3192321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 28641251 - 28641160
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  28641251 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 28641160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 31093427 - 31093517
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  31093427 aaaaatgtagggattttaaaaacattcattgaaatgtagggact-attttcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 31093517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 210 - 304
Target Start/End: Complemental strand, 119103 - 119009
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | |||   | |||||| ||||||||||||||||||||||||||    
T  119103 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatttattaaaggagggcaaaatgtagggaccaaaaacatatttaaccc 119009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 210 - 304
Target Start/End: Original strand, 119955 - 120049
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||   | |||||| ||||||||||||||||||||||||||    
T  119955 aggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatttgtcaaagaagggcaaaatgtagggaccaaaaacatatttaaccc 120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 5746851 - 5746760
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||| |||||||||||||||||||| ||| || |||||||||||| | |||| ||||||||||||||||||||||||||    
T  5746851 gaaaaatgtagggatttttaaaacatttattgaaatgtagggatta-ttctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 5746760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 212 - 302
Target Start/End: Original strand, 21949830 - 21949919
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | |||| |||||||||||||||||| |||||    
T  21949830 gaaaaatgtagggattttaaaaacatttattgaaatgtagggact-attcttaaaatcgcgtaaaatgtagggaccaaaaacataattaac 21949919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 19352423 - 19352298
Alignment:
Q  179 atttgacaacatggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaac 278  Q
    |||||||| || |||||||||   |||||  |||||||||||| | ||||||||||||||||||||||||||||||||| || ||||||  | | ||||     
T  19352423 atttgacagcagggactatttgtgctaacggaggaaaaatgtaagaattttaaaaacatttattgaaatgtaaggactatttgtcaaaaaagggtaaaat 19352324  T
Q  279 gtagggaccaaaaacatatttaaccc 304  Q
    ||||| ||||||||||||||||||||    
T  19352323 gtaggaaccaaaaacatatttaaccc 19352298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 6543845 - 6543935
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| | |||| ||| ||||||||||||||||||||||    
T  6543845 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcgtaaaatgta-ggaccaaaaacatatttaaccc 6543935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 718224 - 718315
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |  |||||||  ||||||| ||||| ||||||||||||||||||||    
T  718224 aaaaatgcagggattttaaaaacatttattgaaatgtaagaactattattcaaaattatgcaaaatgtaggaaccaaaaacatatttaaccc 718315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 3879204 - 3879294
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||| ||||||||||||||||||| ||||||||||| ||| || |||||||||||| |||||| |||||||||||||| |||||||||||    
T  3879204 aaaaatatagggattttaaaaacattcattgaaatgtagggatta-ttctcaaaatcgcgcaaaatgtagggaccaaaaatatatttaaccc 3879294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 14626089 - 14626179
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||||||||| |||||| || | ||| ||| |||||   ||||||||||||||||||||||||    
T  14626089 aaaaatgtagggattttaaaaacatttattgaaatgtagggactattttttaaagtcgcgcaaagtatagggaccaaaaacatatttaacc 14626179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 215 - 304
Target Start/End: Complemental strand, 119272 - 119183
Alignment:
Q  215 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  | ||| ||  ||||||  || ||||||||||||||||||||||    
T  119272 aaatgtagggattttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaaccc 119183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 19353067 - 19353160
Alignment:
Q  211 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||| ||   |||||  || ||||||||||||||||||||||    
T  19353067 ggaaaaatgtagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaaccc 19353160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 4186844 - 4186753
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||| ||||||||||||||||||||||| | |||| |  ||||| |||||| ||| ||||||| ||| ||||||||||||||    
T  4186844 aaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaaccc 4186753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 304
Target Start/End: Complemental strand, 14625214 - 14625121
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||| |||| || ||||||  | | ||||| | | |||| ||||||||||||||||||||||||||    
T  14625214 aggaaaaatgtagggattttaaaaacatttattaaaatttatggactatattt-aaaattgcgtaaaatgtagggaccaaaaacatatttaaccc 14625121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 304
Target Start/End: Original strand, 19353235 - 19353329
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||     ||||||  ||||||||||||| |||||||||||    
T  19353235 aggaaaaatgtatggattttaaaaacgtttattgaaatgtaaggactatttatcaaatgatggcaaaatatagggaccaaaaatatatttaaccc 19353329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 3406692 - 3406775
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||||||||| || | ||| ||  |||||| || || || ||||||||||||||||    
T  3406692 tagggattttaaaaacatttattgaaatgtaaggactatttttaaaagtcacgcaaaatgtcggaacgaaaaacatatttaacc 3406775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 119786 - 119868
Alignment:
Q  215 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatat 297  Q
    |||||||||||||||||||||||||||||||||| |||||||| |  ||||| ||  ||||||  || |||||||||||||||    
T  119786 aaatgtagggattttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaatataaggaccaaaaacatat 119868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 4187837 - 4187927
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||| |||||||||||||||||||||| |  | ||| | | |||||| |||||||| |||||||||||||||||    
T  4187837 aaaatgtgaggattttaaaaatatttattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatatttaaccc 4187927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 19352562 - 19352517
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  19352562 gaaaaatgtagggattttaaaaacatttattgaaatgcaaggacta 19352517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 18999446 - 18999365
Alignment:
Q  223 ggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||| ||||| ||||||||| |||||| |  ||||||  |||||||| ||| |||| |||||||||||||||||    
T  18999446 ggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaacatatttaaccc 18999365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 18999641 - 18999731
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||| ||||| ||||||||| |||||| |  |||||||   |||||| ||| |||| |||||||||||||||||    
T  18999641 aaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatatttaaccc 18999731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 8647358 - 8647394
Alignment:
Q  221 agggattttaaaaacatttattgaaatgtaaggacta 257  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8647358 agggattttaaaaacatttattgaaatgcaaggacta 8647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 30351704 - 30351748
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||    
T  30351704 aaaaatgtaggaattttaaaaatatttattgaaatgtagggacta 30351748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 37813467 - 37813376
Alignment:
Q  211 ggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    |||||||| |||| |||||||||||| ||| ||||||||| |||||| |  ||||||| | | |||  |||||||| ||||| |||||||||    
T  37813467 ggaaaaatttaggaattttaaaaacacttaatgaaatgtatggactattcttcaaaatggcgtaaactgtagggactaaaaatatatttaac 37813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 304
Target Start/End: Original strand, 87137 - 87179
Alignment:
Q  262 tcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||| || ||||||| ||||||||||||||||||||||||||    
T  87137 tcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccc 87179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 18339314 - 18339391
Alignment:
Q  227 tttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||| ||||||||||| || |  |||||||   | |||| ||| |||||||||| |||||||||||    
T  18339314 tttaaaaacatttattaaaatgtaaggattattcttcaaaataacgtaaaatgtaaggaccaaaaatatatttaaccc 18339391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 18340661 - 18340694
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggacta 257  Q
    ||||||||||||||||| ||||||||||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggacta 18340694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 12734401 - 12734691
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12734401 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcagaga 12734500  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  12734501 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcacgttagaaatttgacagcagggactatttacactaactc 12734600  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 300  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12734601 aggaaaaatgtagggattttaaaaacatttattgaaatgtaagaactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatattta 12734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 29917333 - 29917628
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||  ||||||| |||| |||||    
T  29917333 acatcatcgctttcggcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaacaccagcgatccgtgtctacgacgctgaggaga 29917432  T
Q  110 aagatcgtggtgaagttctccgcc--gttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaac 207  Q
    ||||||||||||||| ||   |    ||| |||| ||||||||||||||||||||  |||||| ||||  ||||||||| || ||||||||||| |||||    
T  29917433 aagatcgtggtgaagctcatagagaagttctccgccgagattgaaccgccaacatcagcatcaagttaataatttgacagcaaggactatttacgctaac 29917532  T
Q  208 tcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
      || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  29917533 ggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggact-attctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 29917628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 29917194 - 29917104
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  29917194 aaaaatgtagggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgcaaaacgtagggatcaaaaacatatttaaccc 29917104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 12734262 - 12734172
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  12734262 aaaaatgtagggattttaaaaatattcattgaaatgtagggacta-ttctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccc 12734172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 42253366 - 42253521
Alignment:
Q  11 catcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaa 110  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||| || ||||| || || || ||||||||||||  ||||||| |||| ||||||    
T  42253366 catcatcgctttcggcctccaaatcttcccctctaaaccaacagatttaaccggaagcgtcacaaataccggcgatccgagtctacgacgctgtggagaa 42253465  T
Q  111 agatcgtggtgaag------------ttctccgccgttttccggcgagattgaacc 154  Q
    ||||||||||||||            ||||||||||||||||||||||||||||||    
T  42253466 agatcgtggtgaagctcatagggaacttctccgccgttttccggcgagattgaacc 42253521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 210 - 304
Target Start/End: Complemental strand, 24846055 - 24845962
Alignment:
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| ||||||| |||||||||    
T  24846055 aggaaaaatataggaattttaaaaacatttattgaaatgtaaggact-attctcaaaattgtgcaaaatgtagagactaaaaacagatttaaccc 24845962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 4624623 - 4624532
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |  ||||| || |||||||  || ||||||||||||||||||||||    
T  4624623 aaaaatgtagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaaccc 4624532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 220 - 303
Target Start/End: Original strand, 21005956 - 21006039
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||||||||| || |||||  |  |||||| |||||||||||||||||||||||||    
T  21005956 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaacc 21006039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 4624484 - 4624359
Alignment:
Q  179 atttgacaacatggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaac 278  Q
    |||||||| || |||||||||   |||||  |||||||||||||||||||||||||||||||||||||||||| ||| | || |||||   | | ||||     
T  4624484 atttgacagcagggactatttgtgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaagacgatttgtcaaaggagggaaaaat 4624385  T
Q  279 gtagggaccaaaaacatatttaaccc 304  Q
    ||||| ||||||||||||||||||||    
T  4624384 gtaggcaccaaaaacatatttaaccc 4624359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 44024481 - 44024398
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||| |||||||||||||||||||||| || ||||| ||  |||||| ||| |||||||||||||||||||||    
T  44024481 tagggattttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaacc 44024398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 10047734 - 10047653
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||||||||||||||||| ||||||| |||||||| || ||| |||| ||||||| |||| ||||||||||||||||||    
T  10047734 tagggattttaaaaacatttagtgaaatgcaaggactatttttcagaatcatgcaaaatgtagagaccaaaaacatatttaa 10047653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 6297718 - 6297635
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||| ||  |||||| |||  ||| ||||||||||||||||    
T  6297718 tagggattttaaaaacatttattgaaatgtaaaaactaattttcaaagtcacgcaaaatgtacagacaaaaaacatatttaacc 6297635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 36155361 - 36155270
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||| |  ||||| |||  ||||| ||||||||||| | ||||||||||||    
T  36155361 aaaaatgtaaggattttaaaaacatttattaaaatgtagggactattattcaaagtcgcacaaaatgtagggaccaatagcatatttaaccc 36155270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 4694434 - 4694523
Alignment:
Q  215 aaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||| | ||||||| |||||| || ||||||  | | ||||  ||||||| |||||||||||||||||    
T  4694434 aaatgtagggattttaaaaacatttacttaaatgtagggactatttatcaaaagagcgtaaaatatagggactaaaaacatatttaaccc 4694523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 20682924 - 20683013
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    |||||||| | ||||||||||||||||||| |||||||||||| | |  | ||||||| || ||| ||||||||||| ||||||||||||    
T  20682924 aaaaatgtggagattttaaaaacatttattaaaatgtaaggaccattctttaaaatcgcgctaaatgtagggaccaataacatatttaac 20683013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 296
Target Start/End: Original strand, 6297863 - 6297945
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacata 296  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |  ||||| ||  |||||| |||||||| |||||||||    
T  6297863 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaaacata 6297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 11089133 - 11089211
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    ||||||||||||||||||||||||||||| |||| || ||||| ||    |||| ||| ||||||||||||||||||||    
T  11089133 gattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacataaaatgtatggaccaaaaacatatttaac 11089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 26720411 - 26720323
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||| |  |||||   | |||||| |||||||| ||||| ||||||||    
T  26720411 aaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 20682787 - 20682708
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||||||||||| |||||||||||||| |  ||||| ||| || |||  |||||||||| || ||||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaagtcgcgctaaatatagggaccaataagatatttaacc 20682708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 40304773 - 40304683
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||  |||||||||||| ||||| | ||||||| |||||| || |||||   |||||||| |||||||| ||||| |||||||||||    
T  40304773 aaaatgtgaggattttaaaaatatttacttaaatgtatggactatttatcaaaggagtgcaaaatgtagggactaaaaatatatttaaccc 40304683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 44148667 - 44148578
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaac 302  Q
    ||||||||  ||||||||||||| |||||| ||||||| |||||| |  ||||||  | | |||| |||||||| |||||||||||||||    
T  44148667 aaaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaaagagcgtaaaatgtagggactaaaaacatatttaac 44148578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 16682621 - 16682533
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    ||||||||| | ||||||||||||||| ||||||||||| ||||| |  | ||| ||| ||||||  ||  ||||||||||||||||||    
T  16682621 aaaaatgtaagaattttaaaaacattttttgaaatgtaatgactattctttaaagtcgcgcaaaatataatgaccaaaaacatatttaa 16682533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 6298036 - 6298079
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    |||||||  |||||||||||||||||| ||||||||||||||||    
T  6298036 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggacta 6298079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 36156359 - 36156402
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 257  Q
    |||||||| |||||||||||||||||||||||||| || |||||    
T  36156359 aaaatgtaaggattttaaaaacatttattgaaatgcaaagacta 36156402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 300
Target Start/End: Original strand, 12734706 - 12734736
Alignment:
Q  270 gtgcaaaacgtagggaccaaaaacatattta 300  Q
    |||||||||||||||||||||||||||||||    
T  12734706 gtgcaaaacgtagggaccaaaaacatattta 12734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 22601587 - 22601534
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaat 268  Q
    |||||||| | |||||||||||||||||| ||||||| ||||| |||||||||||    
T  22601587 aaaatgtaagaattttaaaaacatttatttaaatgtagggact-attctcaaaat 22601534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 40777982 - 40778039
Alignment:
Q  386 tttaaagcaaactgtgtgactaaaagagattaaaaagcgtcaataatacaagaaacaa 443  Q
    |||||||||||  ||||| |||||||||||||||| | ||||| |||||||| |||||    
T  40777982 tttaaagcaaaaggtgtgcctaaaagagattaaaatgtgtcaacaatacaagtaacaa 40778039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 254
Target Start/End: Original strand, 45369134 - 45369163
Alignment:
Q  225 attttaaaaacatttattgaaatgtaagga 254  Q
    ||||||||||||||||||||||||||||||    
T  45369134 attttaaaaacatttattgaaatgtaagga 45369163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 10 - 304
Target Start/End: Original strand, 39649 - 39942
Alignment:
Q  10 acatcatcactttcggtctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggaga 109  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||| | ||||||||    
T  39649 acatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacactggcgatctgcatctacgacgttgcggaga 39748  T
Q  110 aagatcgtggtgaagttctccgccgttttccggcgagattgaaccgccaacattggcatcatgttagaaatttgacaacatggactatttacactaactc 209  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||| |||||      
T  39749 aagaccgtggtgaagttccccgccgttttccagcgagattgaaccaccaacattgacatcacgttagaaatttgacaacagggactatttacgctaacgg 39848  T
Q  210 aggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  39849 aggaaaaatgtaaggattttaaaaacatttattgaaatgtagggact-attctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 39942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 39511 - 39420
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||   |||| ||||||||||||||||||||||||||    
T  39511 gaaaaatgtagggattttaaaaacatttattgaaatgtaggga-ttattctcaaaatcgcataaaatgtagggaccaaaaacatatttaaccc 39420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 213 - 304
Target Start/End: Original strand, 32994 - 33085
Alignment:
Q  213 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||| ||||||||||||||||||||||||||    
T  32994 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaaaaacatatttaaccc 33085  T

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Target: scaffold0148; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 29365 - 29273
Alignment:
Q  212 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||| ||||||||||| ||||||||||||||    
T  29365 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaaccc 29273  T

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Target: scaffold0009 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 107974 - 107895
Alignment:
Q  224 gattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    |||||||||||||||||||||||||||||||||| || ||||||||  | |||| |||||||||||||||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaacc 107895  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 108123 - 108210
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattc-tcaaaatcgtgcaaaacgtagggaccaaaaacatatttaa 301  Q
    |||||||  |||||||||||||||||| |||||||| |||| |||||| ||||||  | |||||| ||| |||| ||||||||||||||    
T  108123 aaaatgtgaggattttaaaaacatttaatgaaatgt-aggaataattcttcaaaagggcgcaaaatgtaaggactaaaaacatatttaa 108210  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 35048 - 34965
Alignment:
Q  220 tagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaacc 303  Q
    ||||||||||| ||||||||||| ||| ||||||| || |||||||| ||  |||||| |  | || |||||||||||||||||    
T  35048 tagggattttagaaacatttattaaaacgtaaggaatatttctcaaagtcacgcaaaatgatgagatcaaaaacatatttaacc 34965  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 25843 - 25933
Alignment:
Q  214 aaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 304  Q
    |||||||| | | |||||||| ||||| | ||||||| |||||| || ||||||  | | |||| |||||||| |||||||||||||||||    
T  25843 aaaatgtaagaactttaaaaatatttacttaaatgtagggactatttatcaaaagagcgtaaaatgtagggactaaaaacatatttaaccc 25933  T

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