View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15655_low_22 (Length: 393)
Name: NF15655_low_22
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15655_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 3161723 - 3162063
Alignment:
| Q |
1 |
tccttctatatcatccaatattgatggagatctctcgctgtggaattcatttgatctttctaatattggctttgttacctactaattaaaaatttcatta |
100 |
Q |
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| T |
3161723 |
tccttctatatcatccaatattgatggagatctctcactgtggaattcatttgatctttctaatattggctttgttacctactaattaaaaatttcatta |
3161822 |
T |
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| Q |
101 |
aattaggattttaactttataatgtatgctaaaacatactgtgagttgtgacgatatatttttatccaattttgttattctagtaattaaggtgtagttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3161823 |
aattaggattttaactttataatgtatgctaaaacatactgtgagttgtgacaatatatttttatccaattttgttattctagtaattaaggtgtagttc |
3161922 |
T |
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| Q |
201 |
atgatatttccttagttcattaatgccagttcttgaacaggcatgaaacaaaacccgtacttgcggatatccgctcgaacccatcctgatttgatggact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| ||||||| ||||| |
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| T |
3161923 |
atgatatttccttagttcattaatgccagttcttgaacaggcatgaaacaaaactcgtacttgcggatatccgctcaaatccatcccgatttgacggact |
3162022 |
T |
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| Q |
301 |
ttctccgttttggtagagtttgagttttcccaatttcaaac |
341 |
Q |
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||| ||||||||||||||||||| ||||||| ||||||||| |
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| T |
3162023 |
ttccccgttttggtagagtttgaattttcccgatttcaaac |
3162063 |
T |
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