View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15655_low_35 (Length: 304)
Name: NF15655_low_35
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15655_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 19 - 297
Target Start/End: Complemental strand, 1412705 - 1412427
Alignment:
| Q |
19 |
gattgtttgaaggacgagtactggagctgaacttaaaagagaaacaaattgaagaatgcgtgaaggagtttgagtcaaaagtgaagttggttgaaggaca |
118 |
Q |
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| T |
1412705 |
gattgtttgaaggacgggtactggagctgaacttaaaagagaaacaaattgaagaacgcgtggaggagtttgagtcaaaagtgaagttggttgaaagaca |
1412606 |
T |
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| Q |
119 |
aatgaaatatctttattcgaagaaagaatccttcgaacttccttttcaatttgtttaacaatgcggctttttcttttcttccttaatttgtctcgagagg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
1412605 |
aatgaaatatctttattcgaagaaagaatccttcgaacttccttttcaatttgtttaacaatttggctttttcttttcttccttaatttgtctcgagagg |
1412506 |
T |
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| Q |
219 |
aacatgaaggatacataagaaaccttgaagataaacattgaacctagttgaaaagggtccaaatattacatatcctatg |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1412505 |
aacatgaaggatacataagaaaccttgaagataaacattgaacctagttgaaaagggtccaaatattacatatcctatg |
1412427 |
T |
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