View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15655_low_36 (Length: 301)
Name: NF15655_low_36
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15655_low_36 |
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Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 17 - 291
Target Start/End: Complemental strand, 10097181 - 10096907
Alignment:
| Q |
17 |
acttgctcccttcaatcctgctcatttatccactccaatgaaattattaattaaactaaatgttgacattaaaaagctagctcaactctatatataagag |
116 |
Q |
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| T |
10097181 |
acttgctcccttcaatcctgctcatttatccactccaatgaaattattaattaaactaaatgttgacattaaaaagctagctcaactctatatataagag |
10097082 |
T |
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| Q |
117 |
acgagtgaatatgtaagttagttctcgaagttgtaaacattggtcaacatagtccttcaatttttaatattggttaattatcctcgaaattgtaaaatgt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
10097081 |
acgagtgaatatgtaagttagttctcgaagttgtaaacattggtcaacatagtccttcaatttttaatattggttaattattctcgaaattgtaaaatgt |
10096982 |
T |
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| Q |
217 |
cattcaaaatagtctcttggtcaacttttgttgttagaggtgatgatgtagcgcgttagctgaacatgtcatatt |
291 |
Q |
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||||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |
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| T |
10096981 |
cattcaaaatagtatgttggtcaacttttgttattagaggtgatgatgtagcacgttagttgaacatgtcatatt |
10096907 |
T |
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