View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15655_low_38 (Length: 283)

Name: NF15655_low_38
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15655_low_38
NF15655_low_38
[»] chr7 (38 HSPs)
chr7 (1-275)||(33833744-33834017)
chr7 (1-76)||(10903521-10903596)
chr7 (1-76)||(31357712-31357787)
chr7 (1-76)||(10903314-10903389)
chr7 (1-76)||(30768410-30768485)
chr7 (1-76)||(9378992-9379067)
chr7 (1-76)||(33834147-33834222)
chr7 (3-77)||(9378784-9378858)
chr7 (12-76)||(23390582-23390646)
chr7 (1-52)||(22841068-22841119)
chr7 (1-76)||(29646056-29646131)
chr7 (13-76)||(35866688-35866751)
chr7 (1-76)||(38948450-38948525)
chr7 (2-76)||(33855473-33855547)
chr7 (1-76)||(2179646-2179722)
chr7 (1-77)||(6782817-6782893)
chr7 (1-69)||(29645814-29645882)
chr7 (1-77)||(39808634-39808710)
chr7 (1-69)||(49040565-49040633)
chr7 (1-52)||(2232112-2232163)
chr7 (21-76)||(4258261-4258316)
chr7 (1-76)||(5266351-5266426)
chr7 (1-76)||(6783030-6783105)
chr7 (1-76)||(16565090-16565165)
chr7 (1-76)||(16600497-16600572)
chr7 (1-76)||(24377881-24377956)
chr7 (1-76)||(29252568-29252643)
chr7 (1-76)||(33855683-33855758)
chr7 (1-47)||(7833000-7833046)
chr7 (1-78)||(5775872-5775949)
chr7 (1-77)||(40703896-40703972)
chr7 (12-76)||(48113989-48114053)
chr7 (1-76)||(16564886-16564961)
chr7 (1-76)||(16600701-16600776)
chr7 (1-74)||(32018142-32018215)
chr7 (11-52)||(47856038-47856079)
chr7 (20-76)||(4258056-4258112)
chr7 (1-52)||(13310254-13310308)
[»] chr6 (21 HSPs)
chr6 (1-76)||(26394543-26394618)
chr6 (1-52)||(19291955-19292006)
chr6 (1-76)||(28149785-28149860)
chr6 (13-76)||(11316835-11316898)
chr6 (1-76)||(16590176-16590251)
chr6 (1-76)||(16605129-16605204)
chr6 (1-76)||(16877047-16877122)
chr6 (1-76)||(25998809-25998884)
chr6 (1-76)||(26098334-26098409)
chr6 (16-76)||(2923008-2923068)
chr6 (1-76)||(11313419-11313494)
chr6 (1-76)||(15101148-15101223)
chr6 (1-76)||(15102662-15102737)
chr6 (1-52)||(24558804-24558855)
chr6 (1-52)||(25184019-25184070)
chr6 (1-76)||(25999015-25999090)
chr6 (5-47)||(4654558-4654600)
chr6 (1-45)||(3713221-3713265)
chr6 (1-77)||(6623462-6623538)
chr6 (4-76)||(19712444-19712516)
chr6 (4-76)||(21110012-21110084)
[»] chr3 (49 HSPs)
chr3 (1-77)||(32034082-32034158)
chr3 (2-76)||(40926446-40926520)
chr3 (3-76)||(26915108-26915181)
chr3 (1-78)||(37040020-37040097)
chr3 (1-77)||(39018827-39018903)
chr3 (1-52)||(39269516-39269567)
chr3 (1-52)||(40927046-40927097)
chr3 (5-76)||(50338423-50338494)
chr3 (1-47)||(26926928-26926974)
chr3 (2-52)||(40926719-40926769)
chr3 (2-56)||(40926793-40926847)
chr3 (5-76)||(25578722-25578792)
chr3 (1-76)||(39078808-39078883)
chr3 (8-79)||(42637791-42637862)
chr3 (1-76)||(44367571-44367646)
chr3 (1-76)||(50692518-50692593)
chr3 (1-76)||(54495523-54495598)
chr3 (3-76)||(4191161-4191234)
chr3 (1-78)||(40230676-40230753)
chr3 (1-74)||(49477528-49477601)
chr3 (1-77)||(9264537-9264613)
chr3 (5-69)||(53780096-53780160)
chr3 (1-76)||(9264123-9264198)
chr3 (5-68)||(32515948-32516011)
chr3 (1-76)||(35011856-35011931)
chr3 (1-76)||(40230472-40230546)
chr3 (1-76)||(44461280-44461355)
chr3 (1-76)||(50692315-50692390)
chr3 (1-76)||(53640002-53640077)
chr3 (1-43)||(39269070-39269112)
chr3 (1-47)||(44367799-44367845)
chr3 (12-76)||(5440569-5440633)
chr3 (8-52)||(29763740-29763784)
chr3 (1-77)||(35011648-35011724)
chr3 (1-80)||(51642672-51642752)
chr3 (1-76)||(21832728-21832803)
chr3 (1-76)||(22339733-22339808)
chr3 (1-76)||(35015477-35015552)
chr3 (1-76)||(44145158-44145232)
chr3 (1-76)||(51338478-51338553)
chr3 (1-76)||(53640209-53640284)
chr3 (1-43)||(11414388-11414430)
chr3 (1-47)||(34992598-34992644)
chr3 (1-47)||(34992890-34992936)
chr3 (5-78)||(4029685-4029758)
chr3 (1-69)||(19820565-19820632)
chr3 (5-77)||(37223566-37223638)
chr3 (1-69)||(39956711-39956779)
chr3 (1-73)||(53761435-53761507)
[»] chr8 (28 HSPs)
chr8 (1-76)||(43901054-43901129)
chr8 (1-76)||(33435875-33435950)
chr8 (1-78)||(33435669-33435746)
chr8 (1-68)||(3895131-3895198)
chr8 (1-76)||(43599303-43599378)
chr8 (1-52)||(3895395-3895446)
chr8 (1-80)||(8559569-8559648)
chr8 (1-76)||(40902430-40902505)
chr8 (1-47)||(8056524-8056570)
chr8 (1-70)||(8056274-8056343)
chr8 (1-77)||(18313775-18313851)
chr8 (1-76)||(5720904-5720979)
chr8 (1-44)||(15968101-15968144)
chr8 (1-76)||(15968465-15968540)
chr8 (5-52)||(25186788-25186835)
chr8 (4-75)||(37537135-37537206)
chr8 (1-43)||(16051291-16051333)
chr8 (1-74)||(35561660-35561733)
chr8 (1-77)||(10989278-10989354)
chr8 (1-76)||(15010858-15010934)
chr8 (1-77)||(15011066-15011142)
chr8 (1-77)||(20760697-20760773)
chr8 (1-32)||(15967865-15967896)
chr8 (11-78)||(30176511-30176578)
chr8 (22-76)||(15857171-15857225)
chr8 (27-76)||(30065983-30066032)
chr8 (1-33)||(41456359-41456391)
chr8 (8-76)||(42447254-42447322)
[»] chr4 (38 HSPs)
chr4 (1-76)||(3640198-3640273)
chr4 (1-76)||(8304992-8305067)
chr4 (3-55)||(14115530-14115582)
chr4 (1-76)||(3640448-3640523)
chr4 (2-76)||(39110899-39110973)
chr4 (1-79)||(43943662-43943740)
chr4 (1-52)||(7892689-7892740)
chr4 (1-76)||(25753642-25753717)
chr4 (1-76)||(45684211-45684286)
chr4 (1-76)||(47491883-47491958)
chr4 (1-47)||(41743557-41743603)
chr4 (7-76)||(9758296-9758365)
chr4 (11-76)||(28497261-28497326)
chr4 (1-76)||(5488359-5488434)
chr4 (1-76)||(8560008-8560083)
chr4 (1-76)||(12016720-12016795)
chr4 (1-76)||(12016928-12017003)
chr4 (1-76)||(14944886-14944961)
chr4 (1-76)||(23350791-23350866)
chr4 (1-76)||(29113441-29113516)
chr4 (1-76)||(56511289-56511364)
chr4 (1-76)||(56511496-56511571)
chr4 (11-77)||(42312821-42312887)
chr4 (1-77)||(14115782-14115857)
chr4 (1-76)||(14945135-14945210)
chr4 (1-76)||(28245985-28246060)
chr4 (5-76)||(42561907-42561978)
chr4 (1-52)||(49380917-49380968)
chr4 (1-47)||(4905542-4905588)
chr4 (7-49)||(40197227-40197269)
chr4 (1-47)||(49380681-49380727)
chr4 (13-78)||(22865760-22865824)
chr4 (19-76)||(26806503-26806560)
chr4 (3-76)||(40716675-40716748)
chr4 (3-76)||(53720709-53720782)
chr4 (8-49)||(53738252-53738293)
chr4 (12-76)||(1923039-1923103)
chr4 (1-77)||(28395169-28395244)
[»] chr2 (34 HSPs)
chr2 (1-77)||(39386661-39386737)
chr2 (1-77)||(12431889-12431965)
chr2 (1-76)||(883638-883713)
chr2 (1-76)||(29676286-29676361)
chr2 (1-76)||(34775349-34775424)
chr2 (1-79)||(3435523-3435601)
chr2 (3-76)||(32667175-32667248)
chr2 (1-77)||(20999026-20999102)
chr2 (1-49)||(32975270-32975318)
chr2 (1-76)||(6986453-6986528)
chr2 (10-77)||(12419829-12419896)
chr2 (1-76)||(17727396-17727471)
chr2 (1-76)||(29695376-29695451)
chr2 (1-48)||(36264191-36264238)
chr2 (5-71)||(4721845-4721911)
chr2 (1-43)||(10485219-10485261)
chr2 (4-77)||(19859916-19859989)
chr2 (1-46)||(31761353-31761398)
chr2 (4-76)||(19860029-19860101)
chr2 (1-76)||(29676144-29676217)
chr2 (1-76)||(884049-884124)
chr2 (1-52)||(17265012-17265063)
chr2 (1-48)||(17265217-17265264)
chr2 (1-52)||(27545153-27545204)
chr2 (1-76)||(31761124-31761199)
chr2 (1-76)||(33986012-33986087)
chr2 (1-52)||(36264087-36264138)
chr2 (1-47)||(6986378-6986424)
chr2 (6-76)||(32666969-32667039)
chr2 (11-76)||(15518659-15518724)
chr2 (11-76)||(21734408-21734473)
chr2 (11-76)||(39108080-39108145)
chr2 (1-77)||(7257645-7257721)
chr2 (1-81)||(16006964-16007044)
[»] chr5 (32 HSPs)
chr5 (1-77)||(4563728-4563804)
chr5 (1-76)||(29008064-29008139)
chr5 (1-76)||(38376723-38376798)
chr5 (1-77)||(13413575-13413651)
chr5 (1-76)||(18107825-18107900)
chr5 (1-76)||(28358072-28358147)
chr5 (5-76)||(43490297-43490368)
chr5 (1-75)||(18873231-18873305)
chr5 (5-77)||(3762897-3762969)
chr5 (1-77)||(39268009-39268085)
chr5 (1-76)||(48141-48216)
chr5 (1-76)||(10668352-10668427)
chr5 (1-68)||(17135519-17135586)
chr5 (17-76)||(21019923-21019982)
chr5 (1-76)||(36307960-36308034)
chr5 (1-76)||(37781881-37781956)
chr5 (11-79)||(8812701-8812770)
chr5 (8-69)||(40961748-40961809)
chr5 (12-76)||(1893780-1893844)
chr5 (1-76)||(2908599-2908674)
chr5 (1-80)||(20720587-20720666)
chr5 (1-52)||(35527025-35527076)
chr5 (1-76)||(36878318-36878393)
chr5 (1-76)||(37656769-37656844)
chr5 (1-76)||(43490500-43490575)
chr5 (26-76)||(35913422-35913472)
chr5 (19-76)||(18107533-18107590)
chr5 (1-74)||(30330643-30330716)
chr5 (19-76)||(39268218-39268275)
chr5 (1-77)||(18914405-18914481)
chr5 (1-69)||(34457095-34457163)
chr5 (12-76)||(34457295-34457359)
[»] chr1 (30 HSPs)
chr1 (1-69)||(22826782-22826850)
chr1 (1-76)||(47377827-47377905)
chr1 (1-47)||(40196878-40196924)
chr1 (1-77)||(5222685-5222761)
chr1 (1-76)||(21538971-21539046)
chr1 (1-76)||(39649121-39649196)
chr1 (1-78)||(45395542-45395619)
chr1 (1-76)||(15392017-15392092)
chr1 (1-76)||(39648915-39648989)
chr1 (1-76)||(48558358-48558433)
chr1 (1-76)||(52846886-52846961)
chr1 (1-47)||(6238374-6238420)
chr1 (3-76)||(21428097-21428170)
chr1 (3-80)||(21428306-21428383)
chr1 (14-70)||(9632388-9632444)
chr1 (12-76)||(42845069-42845133)
chr1 (1-76)||(1233918-1233993)
chr1 (1-36)||(6238005-6238040)
chr1 (5-80)||(11018842-11018917)
chr1 (1-76)||(29273262-29273337)
chr1 (1-76)||(38871192-38871267)
chr1 (1-59)||(15391828-15391886)
chr1 (1-43)||(19863167-19863209)
chr1 (2-76)||(22892726-22892800)
chr1 (5-43)||(40073083-40073121)
chr1 (1-47)||(47086314-47086360)
chr1 (1-46)||(29413370-29413415)
chr1 (5-77)||(11581746-11581818)
chr1 (6-78)||(13959392-13959464)
chr1 (4-76)||(40073499-40073571)
[»] scaffold0434 (2 HSPs)
scaffold0434 (1-76)||(13298-13373)
scaffold0434 (1-76)||(13505-13580)
[»] scaffold1138 (1 HSPs)
scaffold1138 (1-47)||(2116-2162)
[»] scaffold0989 (1 HSPs)
scaffold0989 (1-75)||(2984-3058)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-69)||(76851-76919)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-76)||(21300-21376)


Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 33834017 - 33833744
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataacgtacaaattaatactattt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| || || |||||| ||||||||||||||||||||||||||||||    
T  33834017 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttttccaataataacgtacaaattaatactattt 33833918  T
Q  101 tttacaaaacaaattaatacttttaaaccgtaaaaaagatcaagcattgtagtagtgttgtagtggtgattggaagtgatcggattgataatcgaagtta 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33833917 tttacaaaacaaattaatacttttaaac-gtaaaaaagatcaagcattgtagtagtgttgtagtggtgattggaagtgatcggattgataatcgaagtta 33833819  T
Q  201 ggtgaagcggcgtagtagtttgaattgtttgattaatagttatagtgatggacatatgtgatcaaattgatgatg 275  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  33833818 ggtgaagcggcgtagtagtttgaattgtttgattagtagttatagtgatggacatatgtgatcaaattaatgatg 33833744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10903521 - 10903596
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||| ||| || ||||||||||||||||    
T  10903521 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 10903596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31357712 - 31357787
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  31357712 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 31357787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10903314 - 10903389
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  10903314 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 10903389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 30768485 - 30768410
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| |||| ||| || ||||||||||| ||||    
T  30768485 tgaggatcgtctcctctatataaattattatcaagagtcttatctatccgatgtgggacatgagtttttcctaata 30768410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9379067 - 9378992
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| |||||| || |||||||||||||    
T  9379067 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtggaacttgggtttttcccaata 9378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33834222 - 33834147
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||| || ||  ||||||||||||    
T  33834222 tgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggatttttcccaata 33834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 9378858 - 9378784
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||| ||||||| |||||| |||| |||||||||||||||||||||| ||| || || ||||||||||||||    
T  9378858 aggattgcctcctctttataaactcttctcaagagtcttatctattcgatgtgggacttgggtttttcccaataa 9378784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 23390646 - 23390582
Alignment:
Q  12 tcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  23390646 tcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 23390582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22841119 - 22841068
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| ||||    
T  22841119 tgaggattgtctcctctatataaactcttaccaagagtcttatctatccgat 22841068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29646131 - 29646056
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| | || ||| || ||| ||||||||||||    
T  29646131 tgaggattgcctcctctatataaactcctatcaagagtcttatctatccaatgtgggacatgaatttttcccaata 29646056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 35866688 - 35866751
Alignment:
Q  13 cctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  35866688 cctctatataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 35866751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38948450 - 38948525
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| | |||| ||| || ||| ||||||||||||    
T  38948450 tgagaattgtctcctctatataaactcttataaagagtcttatctttccgatgtgggacatgattttttcccaata 38948525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 33855547 - 33855473
Alignment:
Q  2 gaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||| |||||||||| |||||| | |||||| ||||||||||||| |||||||| || || |||||||||||||    
T  33855547 gaggagtgtctcctctttataaactattatcacgagtcttatctatccgatatgggacttgggtttttcccaata 33855473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2179722 - 2179646
Alignment:
Q  1 tgaggattgtctcctctatataaattctta-tcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||||| |||| ||| || ||| ||||||||||||    
T  2179722 tgaggattgtctcctctttataaactctttctcaagagtcttatctatccgatgtgggacttgaatttttcccaata 2179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6782893 - 6782817
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||  || || ||||||||||||||    
T  6782893 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaataa 6782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29645882 - 29645814
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    ||||||||| ||||| |||||||| || ||||||||||||||||||| |||| || ||| |||||||||    
T  29645882 tgaggattgcctcctttatataaactcatatcaagagtcttatctatccgatgtgaaacatgagttttt 29645814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39808634 - 39808710
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || ||||||||||||||    
T  39808634 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 39808710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 49040633 - 49040565
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||| |||| ||  || |||||||||    
T  49040633 tgaggatattctcctctatataaactcttatcaagagtcttatctatccgatgtgagacatgagttttt 49040565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2232163 - 2232112
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||| ||||    
T  2232163 tgaggattgcctcctctatataaactcttatcaagagttttatctatccgat 2232112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 4258261 - 4258316
Alignment:
Q  21 taaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||| |||||||||||||||||||||| |||| ||| || ||||||||||||||||    
T  4258261 taaactcttatcaagagtcttatctatccgatgtgggacttgagtttttcccaata 4258316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5266426 - 5266351
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||  ||||||||||||  ||||||||||||||||||||||  ||| ||| || || |||||||||||||    
T  5266426 tgaggattggatcctctatataatctcttatcaagagtcttatctatctgatgtgggacatgggtttttcccaata 5266351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6783105 - 6783030
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||  || || |||||||||||||    
T  6783105 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 6783030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16565165 - 16565090
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||| | |||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  16565165 tgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16600497 - 16600572
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||| | |||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  16600497 tgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24377881 - 24377956
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||| |||||||||| || |||||| ||| |||||||| ||||  || || ||||||||||||||||    
T  24377881 tgaggattgtctcatctatataaactcctatcaaaagttttatctatccgatgcgggacatgagtttttcccaata 24377956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29252643 - 29252568
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||  ||| || || |||||||||||||    
T  29252643 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgacgtgggacttgggtttttcccaata 29252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33855758 - 33855683
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||| |||||| | |||||| ||||||||||||| |||| ||| || || |||||||||||||    
T  33855758 tgaggagtgtctcctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaata 33855683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7833000 - 7833046
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||    
T  7833000 tgaggattgcctcctctatataaactcctatcaagagtcttatctat 7833046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5775949 - 5775872
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    |||||| || ||||||| |||||| ||| || |||||||| |||||| |||| ||| || ||||||||||||||||||    
T  5775949 tgaggagtgcctcctctttataaactctcattaagagtctcatctatgcgatgtgggacttgagtttttcccaataat 5775872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40703896 - 40703972
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||| |||||||||| |||||| ||| ||||||||||| |||||| |||| ||| || |||| |||||| |||||    
T  40703896 tgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgagcttttccaaataa 40703972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 48114053 - 48113989
Alignment:
Q  12 tcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||| |||||||||||||||||||||| |||| ||| || || ||| |||||||||    
T  48114053 tcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggttattcccaata 48113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16564961 - 16564886
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||| | |||||| |||||| ||||||||||||||| |||| ||| || || |||||||||||||    
T  16564961 tgaggagtgcctcctatttataaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16564886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16600701 - 16600776
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||| | |||||| |||||| ||||||||||||||| |||| ||| || || |||||||||||||    
T  16600701 tgaggagtgcctcctatttataaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32018142 - 32018215
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaa 74  Q
    |||||| |||||| | | |||||| |||||||||||||| |||||||| ||| |||| | ||| ||||||||||    
T  32018142 tgaggagtgtctcatgtttataaactcttatcaagagtcatatctatttgatgtggagcttgattttttcccaa 32018215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 47856038 - 47856079
Alignment:
Q  11 ctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||| |||||| |||||||||||||||||||||| ||||    
T  47856038 ctcctctttataaactcttatcaagagtcttatctatccgat 47856079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 4258056 - 4258112
Alignment:
Q  20 ataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||| |||||||||||||||||||||| |||| ||  || || |||||||||||||    
T  4258056 ataaactcttatcaagagtcttatctatccgatgtgagacttgggtttttcccaata 4258112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13310254 - 13310308
Alignment:
Q  1 tgaggattgtctcctctatataa---attcttatcaagagtcttatctattcgat 52  Q
    ||||||||| |||||||||||||   | |||||||||||||||||||||| ||||    
T  13310254 tgaggattgcctcctctatataataaactcttatcaagagtcttatctatccgat 13310308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26394618 - 26394543
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  26394618 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtggaacatgagtttttcccaata 26394543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19291955 - 19292006
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  19291955 tgaggattgtctcctctatacaaactcttatcaagagtcttatctatccgat 19292006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28149860 - 28149785
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| ||||||||||||| |||||||| |||| ||| || || |||||||||||||    
T  28149860 tgaggattgcctcctctttataaactcttatcaagagttttatctatccgatgtgggacatgggtttttcccaata 28149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 11316898 - 11316835
Alignment:
Q  13 cctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||| |||||| ||| ||||||||||| |||||| |||| |||||| ||||||||||||||||    
T  11316898 cctctttataaactctcatcaagagtctcatctatccgatgtggaacttgagtttttcccaata 11316835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16590251 - 16590176
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||||||||  |||||||||| ||||| |||| ||| || || |||||||||||||    
T  16590251 tgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16590176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16605129 - 16605204
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||||||||  |||||||||| ||||| |||| ||| || || |||||||||||||    
T  16605129 tgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16877047 - 16877122
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  16877047 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16877122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25998884 - 25998809
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||| |||||| | |||||| ||||||||||||| |||| ||| || || |||||||||||||    
T  25998884 tgaggagtgtctcctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaata 25998809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26098409 - 26098334
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||| |||||| | |||||| ||||||||||||| |||| ||| || || |||||||||||||    
T  26098409 tgaggagtgtctcctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaata 26098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 2923008 - 2923068
Alignment:
Q  16 ctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| |||||||||||||| ||||||| |||  ||| || ||||||||||||||||    
T  2923008 ctatataaactcttatcaagagtcatatctatccgacgtgggacatgagtttttcccaata 2923068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11313419 - 11313494
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||| |  || |||||||||||||    
T  11313419 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggatttgggtttttcccaata 11313494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15101148 - 15101223
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || ||  ||||||||||||    
T  15101148 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 15101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15102662 - 15102737
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||||| |||||| ||| ||||||||||| ||||||| ||| ||| || || |||||||||||||    
T  15102662 tgaggagtgcctcctctttataaactctcatcaagagtctcatctatttgatgtgggacttgggtttttcccaata 15102737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24558855 - 24558804
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||||||||||| |||||| |||| | ||||||||||||||| ||||    
T  24558855 tgaggattgtctcctctttataaactcttctaaagagtcttatctatccgat 24558804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25184070 - 25184019
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    |||||||||||| |||| |||||| ||||||||||| |||||||||| ||||    
T  25184070 tgaggattgtcttctctttataaactcttatcaagaatcttatctatccgat 25184019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25999090 - 25999015
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||| |||||| | |||||| |||||||||| || |||| ||| || || |||||||||||||    
T  25999090 tgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgatgtgggacttgggtttttcccaata 25999015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 4654600 - 4654558
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||    
T  4654600 gattgtctcctctgtataaactcttatcaagaatcttatctat 4654558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3713265 - 3713221
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatct 45  Q
    ||||||||| |||||||||||||| || |||||| ||||||||||    
T  3713265 tgaggattgcctcctctatataaactcctatcaaaagtcttatct 3713221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6623462 - 6623538
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| | || || |||| | |||| ||||||||||||||||| |||| ||| || || ||||||||||||||    
T  6623462 tgaggattgcccccactttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 6623538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 19712444 - 19712516
Alignment:
Q  4 ggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| ||||||  |||||| | || ||||||||||||||||| |||| |||||| ||  ||||||||||||    
T  19712444 ggattgcctcctccttataaactattctcaagagtcttatctatccgatgtggaacatggatttttcccaata 19712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 21110012 - 21110084
Alignment:
Q  4 ggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||||||| ||||| ||||| |||||||||| |||  ||| || || | |||||||||||    
T  21110012 ggattgcctcctctatataaactcttaccaagaatcttatctatccgacgtgggacatgggattttcccaata 21110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32034158 - 32034082
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  32034158 tgaggattgtctcctttgtataaactcttatcaagagtcttatctattcgatgtgggacatgagtttttcccaataa 32034082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 40926520 - 40926446
Alignment:
Q  2 gaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  40926520 gaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 40926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 26915181 - 26915108
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||| ||||||||||||||||||||||  ||| ||| || ||||||||| ||||||    
T  26915181 aggattgtctcctctatataaactcttatcaagagtcttatctatctgatctgggacttgagttttttccaata 26915108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37040020 - 37040097
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    |||| |||||||||||||||| || |||||||||||||||||||| |||||| |||||| |||||||||  |||||||    
T  37040020 tgagaattgtctcctctatattaactcttatcaagagtcttatcttttcgatgtggaacatgagtttttttcaataat 37040097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39018827 - 39018903
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| |||| ||| ||   |||||||||||||||    
T  39018827 tgaggattgtctcctctatataaactcctatcaagagtcttatctatccgatgtgggacaaaagtttttcccaataa 39018903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39269567 - 39269516
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  39269567 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgat 39269516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40927097 - 40927046
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  40927097 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgat 40927046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 50338423 - 50338494
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||| ||||||||||||||||||||||  ||||||  || |||||||||| |||||    
T  50338423 gattgtctcctctatataaactcttatcaagagtcttatctatctgatatgagacttgagtttttctcaata 50338494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26926974 - 26926928
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  26926974 tgaggattgtctcctctatataaactcttatcaagagtcttatctat 26926928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 40926769 - 40926719
Alignment:
Q  2 gaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  40926769 gaggattgtctcctctatataaactcttatcaagagtcttatctatccgat 40926719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 40926847 - 40926793
Alignment:
Q  2 gaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatgg 56  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  40926847 gaggattgtctcctctatataaactcttatcaagagtcttatctatctgatatgg 40926793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 25578722 - 25578792
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||| ||| || || |||||||||||||    
T  25578722 gattgtctcctctatataaactcttatcaa-agtcttatctatccgatgtgggacatgggtttttcccaata 25578792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39078808 - 39078883
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||||||| || || |||||||||||||    
T  39078808 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcccaata 39078883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 42637791 - 42637862
Alignment:
Q  8 tgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataata 79  Q
    |||||||| |||||||| |||||||||||||||||||||| | || ||| |  |||||||||||||||||||    
T  42637791 tgtctcctttatataaactcttatcaagagtcttatctatccaatgtgggatatgagtttttcccaataata 42637862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44367646 - 44367571
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||  ||||||  || |  |||||||||||||    
T  44367646 tgaggattgtctcctctatataaactcttctcaagagtcttatctatctgatatgagacatcggtttttcccaata 44367571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50692593 - 50692518
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||||||||||||||| ||||| |||| ||| || || |||||||||||||    
T  50692593 tgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 54495598 - 54495523
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||| |||| ||| || ||  ||||||||||||    
T  54495598 tgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 54495523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 4191161 - 4191234
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  4191161 aggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 4191234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40230676 - 40230753
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    ||||||||| ||||||| |||||| ||| ||||||||||| |||||| |||| |||||| || ||||||| |||||||    
T  40230676 tgaggattgcctcctctttataaactctcatcaagagtctcatctatccgatgtggaacttgggtttttctcaataat 40230753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49477601 - 49477528
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaa 74  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || || |||||||||||    
T  49477601 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaa 49477528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9264537 - 9264613
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||| || || ||||||||||||||    
T  9264537 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 9264613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 53780160 - 53780096
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    |||||||||||||||||||| |||||| || |||||| |||||||||| |||||  |||||||||    
T  53780160 gattgtctcctctatataaactcttattaaaagtcttgtctattcgatgtggaatttgagttttt 53780096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9264123 - 9264198
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||| || || |||||||||||||    
T  9264123 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 9264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 32515948 - 32516011
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttt 68  Q
    |||| ||||||||||||||| || ||||||||||||||||||| |||| ||| || ||||||||    
T  32515948 gattatctcctctatataaactcctatcaagagtcttatctatccgatgtgggacatgagtttt 32516011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35011931 - 35011856
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||||| |||||| ||||||||||||||||||||| || || ||| || || |||||||||||||    
T  35011931 tgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 35011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40230472 - 40230546
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| ||| ||||||||||| |||||| |||| |||||| || |||||||||||||    
T  40230472 tgaggattg-ctcctctttataaactctcatcaagagtctcatctatccgatgtggaacttgggtttttcccaata 40230546  T

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Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44461355 - 44461280
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||| |||||||||||||||| ||| |||||||| |||||||  |  ||||||||| ||||||    
T  44461355 tgaggagtgtctcctctttataaattcttatcaatagttttatctatccgatatgagatttgagttttttccaata 44461280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50692390 - 50692315
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  50692390 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 53640002 - 53640077
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||||||| || ||  ||||||||||||    
T  53640002 tgaggattgcctcctctttatatactcttgtcaagagtcttatctatccgatatgggacttggatttttcccaata 53640077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39269112 - 39269070
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttat 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  39269112 tgaggattgcctcctctatataaactcttatcaagagtcttat 39269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44367845 - 44367799
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  44367845 tgaggattgcctcctctatataaactcttatcaagagttttatctat 44367799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 5440633 - 5440569
Alignment:
Q  12 tcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||| |||| ||||||||||| ||||| |||| |||||| || |||||||||||||    
T  5440633 tcctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaata 5440569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 29763740 - 29763784
Alignment:
Q  8 tgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||    
T  29763740 tgtctcctctttataaactcttatcaagagtcttatctatccgat 29763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35011724 - 35011648
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||| |||||||||| |||||  ||||||||||||||||||||| || || ||| || || |||||| |||||||    
T  35011724 tgaggagtgtctcctctttataatctcttatcaagagtcttatctactcaatgtgggacttgggttttttccaataa 35011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 51642672 - 51642752
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaac-gtgagtttttcccaataataa 80  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||| ||  || |||||||||||||||||    
T  51642672 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggactttgggtttttcccaataataa 51642752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21832728 - 21832803
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||  |||||| |||| ||||||||||| ||||| |||| ||| || |||| |||| ||||||    
T  21832728 tgaggattgtctcctccttataaactcttctcaagagtcttgtctatccgatgtgggacttgagatttttccaata 21832803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22339808 - 22339733
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || ||  ||||||||||||    
T  22339808 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 22339733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35015552 - 35015477
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| | ||||||||||| |||||||| |||| ||| || ||  ||||||||||||    
T  35015552 tgaggattgcctcctctttataaacttttatcaagagttttatctatccgatgtgggacttggctttttcccaata 35015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44145158 - 44145232
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||| |||||||||||| |||||| | ||||||||||||||||||||  ||| ||| || |||||||| |||||||    
T  44145158 tgagtattgtctcctctttataaactattatcaagagtcttatctatctgatgtgggac-tgagttttccccaata 44145232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 51338478 - 51338553
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| |||||||||||||||||  ||| ||| || || |||||||||||||    
T  51338478 tgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 51338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 53640209 - 53640284
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| |||||||||||||||||  ||| ||| || || |||||||||||||    
T  53640209 tgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 53640284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11414430 - 11414388
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttat 43  Q
    ||||||||||||||||| |||||| |||| |||||||||||||    
T  11414430 tgaggattgtctcctctttataaactcttctcaagagtcttat 11414388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34992644 - 34992598
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||| ||||||| |||||| |||| |||||||||||||||||    
T  34992644 tgaggattgcctcctctttataaactcttctcaagagtcttatctat 34992598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34992936 - 34992890
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||| ||||||| |||||| |||| |||||||||||||||||    
T  34992936 tgaggattgcctcctctttataaactcttctcaagagtcttatctat 34992890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 4029685 - 4029758
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    |||||| |||||| |||||| |||| ||||||||||||||||| |||| ||| || ||  || |||||||||||    
T  4029685 gattgtatcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgcattattcccaataat 4029758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19820565 - 19820632
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    ||||||||||||||||| |||||| |||| |||||||| |||| ||| |||| |||||| || ||||||    
T  19820565 tgaggattgtctcctctttataaactcttctcaagagttttat-tatccgatgtggaacatgggttttt 19820632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 37223638 - 37223566
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||| ||||||| |||||| |||| ||| ||||||||||||| |||| ||| || |  ||||||||||||||    
T  37223638 gattgcctcctctttataaactcttctcaggagtcttatctatccgatgtgggacttaggtttttcccaataa 37223566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39956711 - 39956779
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| |||||  ||| ||| || |||||||||    
T  39956711 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatctgatgtgggacttgagttttt 39956779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 53761435 - 53761507
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttccca 73  Q
    |||||| || ||||||| |||||| |||||||||| ||||||||||| |||  ||| || || ||||||||||    
T  53761435 tgaggagtgcctcctctttataaactcttatcaagggtcttatctatccgaagtgggacttgggtttttccca 53761507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43901054 - 43901129
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  43901054 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 43901129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33435950 - 33435875
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  33435950 tgaggattgtctcctttatataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 33435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33435746 - 33435669
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||| |||| ||  || ||||||||||||||||||    
T  33435746 tgaggattgtctcctttatataaactcttatcaagagttttatctatccgatgtgagacttgagtttttcccaataat 33435669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3895198 - 3895131
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttt 68  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||||| | || ||||||||    
T  3895198 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatataggacatgagtttt 3895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43599378 - 43599303
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || ||||||||||||||||    
T  43599378 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 43599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3895446 - 3895395
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  3895446 tgaggattgccttctctatataaattcttatcaagagtcttatctatccgat 3895395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8559648 - 8559569
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataa 80  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||| || || |||||||||||||||||    
T  8559648 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataataa 8559569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40902430 - 40902505
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| |||||| || |||||||||||||    
T  40902430 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaata 40902505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8056524 - 8056570
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  8056524 tgaggattgtctcctctatataaacacttatcaagagtcttatctat 8056570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8056274 - 8056343
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttc 70  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| | |||| ||| || || |||||||    
T  8056274 tgaggattgcctcctctatataaactcttatcaagagtcttatctttccgatgtgggacatgggtttttc 8056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18313851 - 18313775
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| |||||||||||||| | ||| |||||||||||||||| |||| ||| || ||  |||||||||||||    
T  18313851 tgaggattgcctcctctatataaacttttaacaagagtcttatctatccgatgtgggacttggatttttcccaataa 18313775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 5720904 - 5720979
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || ||  ||||||||||||    
T  5720904 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 5720979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15968101 - 15968144
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatc 44  Q
    ||||||||||||||| |||||||| |||||||||||||||||||    
T  15968101 tgaggattgtctcctttatataaactcttatcaagagtcttatc 15968144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15968465 - 15968540
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||| |||||||||||| ||||| ||||||||||||||| |||||| |||| ||| || ||  ||||||||||||    
T  15968465 tgagggttgtctcctctaaataaactcttatcaagagtctaatctatacgatgtgggacatggatttttcccaata 15968540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 25186835 - 25186788
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||    
T  25186835 gattgtctcctctatataaacttttatcaagagtcttatctatccgat 25186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 37537135 - 37537206
Alignment:
Q  4 ggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaat 75  Q
    |||||||||||||| || | | |||| |||| ||||||||||||||||| ||| || |||||||||||||||    
T  37537135 ggattgtctcctctttacatactcttctcaaaagtcttatctattcgatgtgggacttgagtttttcccaat 37537206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16051291 - 16051333
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttat 43  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  16051291 tgaggagtgtctcctctatataaactcttatcaagagtcttat 16051333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35561733 - 35561660
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaa 74  Q
    ||||||||| ||||||| |||||| |||| |||||| |||||||||| |||| ||| || || |||||||||||    
T  35561733 tgaggattgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggacttgggtttttcccaa 35561660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10989278 - 10989354
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||| |||||||    
T  10989278 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaataa 10989354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15010858 - 15010934
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgt-gagtttttcccaata 76  Q
    ||||||||| ||||||| ||||||||||| ||||||||||| ||||| |||| ||| || | | |||||||||||||    
T  15010858 tgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgatgtgggacttggggtttttcccaata 15010934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15011066 - 15011142
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||| |||||||    
T  15011066 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaataa 15011142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 20760697 - 20760773
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||| ||| |||||| |||| ||||||||||| ||||| |||| ||| || || ||||||||||||||    
T  20760697 tgaggattgcctcatctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 20760773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 15967865 - 15967896
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatc 32  Q
    ||||||||||||||||||||||||||||||||    
T  15967865 tgaggattgtctcctctatataaattcttatc 15967896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 30176511 - 30176578
Alignment:
Q  11 ctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    ||||||| |||||| ||| |||||||||||  ||||| |||| ||| || ||||||||||||||||||    
T  30176511 ctcctctttataaactctcatcaagagtctcgtctatccgatgtgggacttgagtttttcccaataat 30176578  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 15857225 - 15857171
Alignment:
Q  22 aaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||| || ||||||||||||||||| |||| ||| || ||||||||||||||||    
T  15857225 aaatttttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 15857171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 30066032 - 30065983
Alignment:
Q  27 cttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||  ||| ||| || ||||||||||||||||    
T  30066032 cttatcaagagtcttatctatctgatgtgggacttgagtttttcccaata 30065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41456359 - 41456391
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatca 33  Q
    |||||||||||||||||||||||| ||||||||    
T  41456359 tgaggattgtctcctctatataaactcttatca 41456391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 42447322 - 42447254
Alignment:
Q  8 tgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||| || ||| | |||||||||||| |||||||| ||| ||| || ||||||||| ||||||    
T  42447322 tgtctcctctttagaaactattatcaagagtcgtatctatttgatgtgggacttgagttttttccaata 42447254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 7e-21; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3640273 - 3640198
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||  ||| || ||||||||||||||||    
T  3640273 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgacgtgggacatgagtttttcccaata 3640198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8304992 - 8305067
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| |||| | | || ||||||||||||||||    
T  8304992 tgaggattgtctcctctatataaactcttatcaaaagtcttatctatccgatgtaggacatgagtttttcccaata 8305067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 14115530 - 14115582
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatg 55  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  14115530 aggattgtctcctctatataaactcttatcaagagtcttatctatccgatatg 14115582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3640523 - 3640448
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||||| |||| |||||||||||||||||||||| |||| ||| |  ||||||||||||||||    
T  3640523 tgaggattgcctcctctatttaaactcttatcaagagtcttatctatccgatgtgggagatgagtttttcccaata 3640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 39110973 - 39110899
Alignment:
Q  2 gaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||| |||| | |||| ||||||||||||||||| |||| ||| || ||||||||||||||||    
T  39110973 gaggattgtctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 39110899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43943740 - 43943662
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataata 79  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || || ||||||||||||||||    
T  43943740 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataata 43943662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7892689 - 7892740
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  7892689 tgaggattgtctcctctatataaactcatatcaagagtcttatctatccgat 7892740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25753642 - 25753717
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||||||||||||||| ||||| |||| ||| || || |||||||||||||    
T  25753642 tgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 25753717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 45684211 - 45684286
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||| ||||||||||| | |||||||||||| ||||||| |||| ||| || || |||||||||||||    
T  45684211 tgaggattgtcttctctatataaacttttatcaagagtcgtatctatccgatgtgggacatgggtttttcccaata 45684286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47491883 - 47491958
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||| |||||||| || ||||||||||||||||||| |||| ||| || || |||||||||||||    
T  47491883 tgaggattgcctcctttatataaactcctatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 47491958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41743603 - 41743557
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  41743603 tgaggattgcctcctctatataaactcttatcaagagtcttatctat 41743557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 9758365 - 9758296
Alignment:
Q  7 ttgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| ||| |  |||  |||||||||||    
T  9758365 ttgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggatatgaacttttcccaata 9758296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 28497261 - 28497326
Alignment:
Q  11 ctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||| |||||| |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  28497261 ctcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 28497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 5488434 - 5488359
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||| ||| |||| ||| || || |||||||||||||    
T  5488434 tgaggattgcctcctctttataaactcttctcaagagtcttatttatccgatgtgggacttgggtttttcccaata 5488359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8560008 - 8560083
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||| |||| ||| || ||   |||||||||||    
T  8560008 tgaggattgcctcctcgatataaactcttatcaagagtcttatctatccgatgtgggacttggacttttcccaata 8560083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12016720 - 12016795
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  12016720 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12016795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12016928 - 12017003
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  12016928 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12017003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14944961 - 14944886
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||| | ||||||||| |||| ||||| ||||||||||||||||  ||| |||||| |||||||||| |||||    
T  14944961 tgaggatcgcctcctctatgtaaactcttaccaagagtcttatctatctgatgtggaacatgagtttttctcaata 14944886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23350866 - 23350791
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||| |||| | |||||||||||||||||| ||| |||| ||| |  || |||||||||||||    
T  23350866 tgaggattgtctcctctttatatactcttatcaagagtcttatttatccgatgtgggatttgggtttttcccaata 23350791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29113516 - 29113441
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| |||||||||||||||||  ||| ||| || || |||||||||||||    
T  29113516 tgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaata 29113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 56511364 - 56511289
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||||| |||||| ||||||||||||||||||||| || || ||| || || |||||||||||||    
T  56511364 tgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 56511289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 56511571 - 56511496
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||||| |||||| ||||||||||||||||||||| || || ||| || || |||||||||||||    
T  56511571 tgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 56511496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 42312887 - 42312821
Alignment:
Q  11 ctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||| |||||| | | ||||||||||| |||||| ||||||||||| ||||||||| |||||||    
T  42312887 ctcctctttataaactttcatcaagagtctcatctatccgatatggaacttgagttttttccaataa 42312821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14115782 - 14115857
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||||||  ||||||||||||| |||||||||| ||||||||||| | ||  || || |||||||||||||||||    
T  14115782 tgaggattgcatcctctatataaactcttatcaagtgtcttatctatcctatgcgg-acatgagtttttcccaataa 14115857  T

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Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14945210 - 14945135
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||  ||||||||||||| ||||   ||||||||||||||| |||| ||| || || |||||||||||||    
T  14945210 tgaggattgcatcctctatataaactctttcgaagagtcttatctatccgatgtgggacatgtgtttttcccaata 14945135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28246060 - 28245985
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| || |||| |||||| ||| ||||||||||| |||||| |||| ||| || || |||||||||||||    
T  28246060 tgaggattgccttctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaata 28245985  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 42561907 - 42561978
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||| |||||||||||||| | |||||||||||||||| ||| |||| | | |  ||||||||||||||||    
T  42561907 gattgcctcctctatataaaattttatcaagagtcttatatatccgatgtaggatatgagtttttcccaata 42561978  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 49380917 - 49380968
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| ||||    
T  49380917 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 49380968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4905542 - 4905588
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||||||||||| |||| | |||| |||||||||||||||||    
T  4905542 tgaggattgtctcctctttatacactcttctcaagagtcttatctat 4905588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 40197269 - 40197227
Alignment:
Q  7 ttgtctcctctatataaattcttatcaagagtcttatctattc 49  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||    
T  40197269 ttgtctcctctttataaactcttatcaagagtctcatctattc 40197227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49380727 - 49380681
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||| ||||||| |||||| |||| |||||||||||||||||    
T  49380727 tgaggattgcctcctctttataaactcttctcaagagtcttatctat 49380681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 22865824 - 22865760
Alignment:
Q  13 cctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    ||||| |||||| | |||||||| ||||||||||| |||| ||| || ||||||||||||||||||    
T  22865824 cctctttataaactattatcaagggtcttatctatccgatgtgg-acttgagtttttcccaataat 22865760  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 26806560 - 26806503
Alignment:
Q  19 tataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||||||| ||||||| |||| ||| || || |||||||||||||    
T  26806560 tataaactcttatcaagagtcctatctatccgatttgggacttgggtttttcccaata 26806503  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 40716675 - 40716748
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||| ||||||| |||| | | || ||||||||||||||||| |||| ||| || ||||||||| ||||||    
T  40716675 aggattgcctcctctttatatactattctcaagagtcttatctatacgatgtgggacttgagttttttccaata 40716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 53720709 - 53720782
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||| |||||||  ||||| | ||||||| |||||||||||| |||| ||| || | ||||||||||||||    
T  53720709 aggattgcctcctcttaataaacttttatcaaaagtcttatctatccgatgtgggacttcagtttttcccaata 53720782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 53738252 - 53738293
Alignment:
Q  8 tgtctcctctatataaattcttatcaagagtcttatctattc 49  Q
    |||||||||| |||||| |||| |||||||||||||||||||    
T  53738252 tgtctcctctttataaactcttctcaagagtcttatctattc 53738293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 1923039 - 1923103
Alignment:
Q  12 tcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||| |||| |||||||||||||||||  ||| ||| || || |||||||||||||    
T  1923039 tcctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaata 1923103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28395244 - 28395169
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| | || ||| || || ||||||||||||||    
T  28395244 tgaggattgcctcctctttatatactctt-tcaagagtcttatctatccaatgtgggacttgggtttttcccaataa 28395169  T

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Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39386737 - 39386661
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||| ||| || || ||||||||||||||    
T  39386737 tgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaataa 39386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12431965 - 12431889
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||| |||| ||| || || ||||||||||||||    
T  12431965 tgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 12431889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 883638 - 883713
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || || |||||||||||||    
T  883638 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29676361 - 29676286
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||| |||| ||  || || |||||||||||||    
T  29676361 tgaggattgactcctatatataaactcttatcaagagtcttatctatccgatgtgagacatgtgtttttcccaata 29676286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 34775424 - 34775349
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| ||||||||||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  34775424 tgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 34775349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3435523 - 3435601
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataata 79  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || ||| ||||| |||||||||    
T  3435523 tgaggattgcctcctctgtataaactcttctcaagagtcttatctatccgatgtgggacttgaattttttccaataata 3435601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 32667248 - 32667175
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||  ||| ||| || |  |||||||||||||    
T  32667248 aggattgcctcctctatataaactcttatcaagagtcttatctatctgatgtgggacttcggtttttcccaata 32667175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 20999026 - 20999102
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || ||||||||||||||    
T  20999026 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 20999102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32975318 - 32975270
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattc 49  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  32975318 tgaggattgtttcctctttataaattcttctcaagagtcttatctattc 32975270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6986453 - 6986528
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || ||  ||||||||||||    
T  6986453 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 6986528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 12419896 - 12419829
Alignment:
Q  10 tctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||||| |||||| |||| ||||||||||||||||| |||| ||| || || ||||||||||||||    
T  12419896 tctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 12419829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17727471 - 17727396
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| || |||| |||||| |||| ||||||||||||||||| |||| ||| || || |||||||||||||    
T  17727471 tgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 17727396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29695376 - 29695451
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||| |||| |||||| |||| ||||||||||||||||| |||| ||  || || |||||||||||||    
T  29695376 tgaggattgtctactctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 29695451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36264191 - 36264238
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctatt 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  36264191 tgaggattgtcacctctatataaacacttatcaagagtcttatctatt 36264238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 4721845 - 4721911
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcc 71  Q
    ||||| |||||||||||||| ||||||||||||||| |||||| |||| ||| || || ||||||||    
T  4721845 gattgcctcctctatataaactcttatcaagagtctaatctatccgatgtgggacatgggtttttcc 4721911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10485261 - 10485219
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttat 43  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  10485261 tgaggattgtctcctctatataaactctcatcaagagtcttat 10485219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 19859989 - 19859916
Alignment:
Q  4 ggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || ||||||||||||||    
T  19859989 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 19859916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31761398 - 31761353
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatcta 46  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  31761398 tgaggattgcctcctctatataaactcttattaagagtcttatcta 31761353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 19860101 - 19860029
Alignment:
Q  4 ggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  19860101 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 19860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29676217 - 29676144
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||||||||||||| | |||||  || ||||||||||||||| ||| |  || |||||||||||||    
T  29676217 tgaggattgtctcctctatataaacttttatc--gaatcttatctattcgatgtgggatatgggtttttcccaata 29676144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 884124 - 884049
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| |||||||||| |||||| |||| ||| || || |||||||||||||    
T  884124 tgaggattgcctcctctttatatactcttctcaagagtctcatctatccgatgtgggacttgggtttttcccaata 884049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17265012 - 17265063
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||| |||||||||||||| | ||| |||||||||||||||| ||||    
T  17265012 tgaggattgcctcctctatataaacttttaccaagagtcttatctatccgat 17265063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17265264 - 17265217
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctatt 48  Q
    |||||||||  ||||||||||||| ||||| |||||||||||||||||    
T  17265264 tgaggattgcatcctctatataaactcttaccaagagtcttatctatt 17265217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27545153 - 27545204
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| ||||    
T  27545153 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 27545204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31761199 - 31761124
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||| |||||||||| |||| |||| |||||||||||| |||| ||| || |  |||||||||||||    
T  31761199 tgaggattgcctcttctatataaactcttctcaaaagtcttatctatccgatgtgggacttaggtttttcccaata 31761124  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33986012 - 33986087
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||| |  || |||||||||||||    
T  33986012 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggagttgggtttttcccaata 33986087  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36264138 - 36264087
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||| ||||||||||||||  |||||||||||| |||||||| ||||    
T  36264138 tgaggattgcctcctctatataaacacttatcaagagttttatctatccgat 36264087  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6986424 - 6986378
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||||||||||| |||||| || | |||||||||||||||||    
T  6986424 tgaggattgtctcctctttataaactcctctcaagagtcttatctat 6986378  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 32667039 - 32666969
Alignment:
Q  6 attgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||| |||||||||||||| |||||||||||||||||| ||| | ||  || || || |||||||||||||    
T  32667039 attgcctcctctatataaactcttatcaagagtcttatttatccaatgagggacttgggtttttcccaata 32666969  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 15518724 - 15518659
Alignment:
Q  11 ctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||| |||| | |||| ||||||||||||||||| |||| |||||| ||  ||||||||||||    
T  15518724 ctcctctttatatactcttttcaagagtcttatctatccgatttggaacatggatttttcccaata 15518659  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 21734473 - 21734408
Alignment:
Q  11 ctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||| |||| | |||| ||||||||||||||||| |||| ||| | ||| |||||||||||||    
T  21734473 ctcctctttatatactcttctcaagagtcttatctatccgatgtgggatgtgggtttttcccaata 21734408  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 39108145 - 39108080
Alignment:
Q  11 ctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||| || ||| ||||||||||||    
T  39108145 ctcctctatataaactcttatcaagattcttatatatctgatgtgggacttgaatttttcccaata 39108080  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7257645 - 7257721
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||||||  |||||| |||||| | || ||||||||||||||||| |||||||| || |   |||||||||||||    
T  7257645 tgaggattgcatcctctttataaactattctcaagagtcttatctatccgatatgggacttagatttttcccaataa 7257721  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16007044 - 16006964
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataac 81  Q
    ||||||||  ||||||| |||| | |||| ||||||||||| ||||| |||| ||| || || ||||||||||||| ||||    
T  16007044 tgaggattacctcctctttatatactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaatactaac 16006964  T

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Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4563728 - 4563804
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||||| |||| ||  || |||||||||||||||||    
T  4563728 tgaggattgtctcctctatgtaaactcttatcaaaagtcttatctatccgatgtgagacatgagtttttcccaataa 4563804  T

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Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29008139 - 29008064
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| || ||||||||||| || ||||||||||||||||||| |||| |||||| || |||||||||||||    
T  29008139 tgaggattgccttctctatataaactcctatcaagagtcttatctatccgatgtggaacatgggtttttcccaata 29008064  T

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Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38376798 - 38376723
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||| |||| ||| || || |||||||||||||    
T  38376798 tgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 38376723  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13413651 - 13413575
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||| ||||||| |||||| |||| |||||||||||||||||| ||| ||| || || ||||||||||||||    
T  13413651 tgaggattgcctcctctttataaactcttctcaagagtcttatctatttgatgtgggacttgggtttttcccaataa 13413575  T

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Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18107900 - 18107825
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||||| |||||||||||||||||||||||||| ||||||| ||| |  || |||||||||||||    
T  18107900 tgaggagtgcctcctctttataaattcttatcaagagtcttatcgattcgatgtgggaattgggtttttcccaata 18107825  T

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Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28358072 - 28358147
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  28358072 tgaggattgtctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 28358147  T

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Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 43490297 - 43490368
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||| |||||| |||| ||||||||||||||||| |||| ||| || || |||||||||||||    
T  43490297 gattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 43490368  T

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Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18873231 - 18873305
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaat 75  Q
    ||||||||| |||||||||||||| ||||||||| |||||||||||| |||| ||| || || | ||||||||||    
T  18873231 tgaggattgcctcctctatataaactcttatcaatagtcttatctatccgatgtgggacatgggcttttcccaat 18873305  T

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Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 3762969 - 3762897
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || || ||||||||||||||    
T  3762969 gattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacatgggtttttcccaataa 3762897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39268085 - 39268009
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||| || ||||| | |||||| |||||||||||||||||||||| |||| ||| || || ||||||||||||||    
T  39268085 tgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 39268009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48141 - 48216
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  48141 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 48216  T

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Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10668427 - 10668352
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||| | |||| ||||||||||||| ||||||||| ||| ||| || || |||||||||||||    
T  10668427 tgaggagtgtctcctctttgtaaactcttatcaagagttttatctatttgatgtgggacttgggtttttcccaata 10668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17135586 - 17135519
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttt 68  Q
    |||||| |||||||||| |||||| |||||||||||||||||| ||| |||| ||| || ||||||||    
T  17135586 tgaggagtgtctcctctttataaactcttatcaagagtcttatttatccgatgtgggacttgagtttt 17135519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 21019923 - 21019982
Alignment:
Q  17 tatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| | |||||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  21019923 tatatagactcttatcaagagtcttatatatccgatgtggaacatgagtttttcccaata 21019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36307960 - 36308034
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| |||||| ||| ||||| ||||||    
T  36307960 tgaggattgactcctctttataaactctt-tcaagagtcttatctatccgatgtggaacttgaattttttccaata 36308034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37781881 - 37781956
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||  || ||||||||||||||||    
T  37781881 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttgagtttttcccaata 37781956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 8812701 - 8812770
Alignment:
Q  11 ctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttc-ccaataata 79  Q
    |||||||||||||| |||||| ||||||||||| ||| |||| |||||  |||||||||| |||||||||    
T  8812701 ctcctctatataaactcttattaagagtcttatttatccgatgtggaatttgagtttttctccaataata 8812770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 40961809 - 40961748
Alignment:
Q  8 tgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    |||||||||  |||||| ||||||||| ||||||||||||  |||||||||| |||||||||    
T  40961809 tgtctcctcgttataaactcttatcaaaagtcttatctatctgatatggaacttgagttttt 40961748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 1893844 - 1893780
Alignment:
Q  12 tcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||| |||||||||||||| ||||||| | |||||  || ||||||||||||||||    
T  1893844 tcctctttataaactcttatcaagagtcgtatctatccaatatgagacttgagtttttcccaata 1893780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2908599 - 2908674
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| | || ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  2908599 tgaggattgcctcctctttataaactattctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 2908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20720587 - 20720666
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataa 80  Q
    |||||| || ||||| | || ||| ||||||||||| ||||||||||  ||| ||| || ||||||||||||||||||||    
T  20720587 tgaggagtgcctcctttttacaaactcttatcaagaatcttatctatctgatgtgggacttgagtttttcccaataataa 20720666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35527025 - 35527076
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgat 52  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| ||||    
T  35527025 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 35527076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 36878393 - 36878318
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||| | |||||| ||||||||| ||||||||||||  ||| ||| || |  |||||||||||||    
T  36878393 tgaggattgtctcctgtttataaactcttatcaaaagtcttatctatctgatgtgggactttggtttttcccaata 36878318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37656769 - 37656844
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||  || ||||||||| ||||||    
T  37656769 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttgagttttttccaata 37656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43490500 - 43490575
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||| ||||||| |||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  43490500 tgagtattgtcttctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 43490575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 35913472 - 35913422
Alignment:
Q  26 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| ||||||||||| |||||||||||  || ||||||||||||||||    
T  35913472 tcttataaagagtcttatatattcgatatgagacttgagtttttcccaata 35913422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 18107533 - 18107590
Alignment:
Q  19 tataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| ||| |||||||||||||||||| |||| ||| || || |||||||||||||    
T  18107533 tataaactctcatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 18107590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30330716 - 30330643
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaa 74  Q
    ||||||||| |||||||||||||| ||| ||  |||||||||||||| |||| ||| || ||  ||||||||||    
T  30330716 tgaggattgcctcctctatataaactctaattcagagtcttatctatccgatgtgggacttggatttttcccaa 30330643  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 39268275 - 39268218
Alignment:
Q  19 tataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| ||||||||||||| |||||||| |||| ||| || || |||||||||||||    
T  39268275 tataaactcttatcaagagttttatctatccgatgtgggacttgggtttttcccaata 39268218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18914405 - 18914481
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||||||||||||| | |||||| | || |||||||||||  |||| |||| ||| || || ||||||||||||||    
T  18914405 tgaggattgtctcctttttataaacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaataa 18914481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34457163 - 34457095
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    |||||||||  |||||| |||||| |||| ||||||||||| ||||| |||||||| || || ||||||    
T  34457163 tgaggattgcatcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggttttt 34457095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 34457359 - 34457295
Alignment:
Q  12 tcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  34457359 tcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 34457295  T

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Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22826782 - 22826850
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| || || ||||||    
T  22826782 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttt 22826850  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 47377905 - 47377827
Alignment:
Q  1 tgaggattgtctcctctatataaa---ttcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||||||||||   || |||||||||||||||||||| |||| ||| || ||||||||||||||||    
T  47377905 tgaggattgtctcctctatataaactattattatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 47377827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40196878 - 40196924
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  40196878 tgaggattgtctcctctatataaactcttatcaagagtcttatctat 40196924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5222761 - 5222685
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||  ||| ||| || |  ||||||||||||||    
T  5222761 tgaggattgtctcctctacataaactcttatcaagagtcttatctatcagatgtgggacttaggtttttcccaataa 5222685  T

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Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21538971 - 21539046
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||| ||| |||||||| || ||  ||||||||||||    
T  21538971 tgaggattgcctcctctttataaattcttctcaagagtcttatttatccgatatgggacatggatttttcccaata 21539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39649121 - 39649196
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || || |||||||||||||    
T  39649121 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 39649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45395619 - 45395542
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    |||||| || ||||||  |||||| ||||||||||||||||||||||  ||||||| || || |||||||||||||||    
T  45395619 tgaggagtgcctcctcattataaactcttatcaagagtcttatctatctgatatgggacttgggtttttcccaataat 45395542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15392092 - 15392017
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||| || || |||||||||||||    
T  15392092 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 15392017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39648915 - 39648989
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| |||||||||||||||| ||||| ||| || || |||||||||||||    
T  39648915 tgaggattgcctcctctttataaactcttctcaagagtcttatcta-tcgatgtgggacttgggtttttcccaata 39648989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48558358 - 48558433
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||||||  |||||| |||| | |||| ||||||||||||||||| |||||||| || || |||||||||||||    
T  48558358 tgaggattgcttcctctttatatactcttctcaagagtcttatctatccgatatgggacttgggtttttcccaata 48558433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 52846886 - 52846961
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||| || || |||||||||||||    
T  52846886 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 52846961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6238374 - 6238420
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||    
T  6238374 tgaggattgcctcctctatataaactcttatcaggagtcttatctat 6238420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 21428097 - 21428170
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||| |||||||| |||||||||||||||||||||| | || | | || ||| ||||||||||||    
T  21428097 aggattgtcacctttatataaactcttatcaagagtcttatctatccaatgtaggacttgaatttttcccaata 21428170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 21428306 - 21428383
Alignment:
Q  3 aggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataa 80  Q
    ||||||||||||||| |||||| ||||||||||| |||||||| |  ||| | |||| ||  ||||||||||||||||    
T  21428306 aggattgtctcctctgtataaactcttatcaagaatcttatctttctgatgtagaacttggctttttcccaataataa 21428383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 9632444 - 9632388
Alignment:
Q  14 ctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttc 70  Q
    |||| |||||| ||||| ||||||| |||||||| ||||||||||| ||||||||||    
T  9632444 ctctttataaactcttaccaagagttttatctatccgatatggaacttgagtttttc 9632388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 42845069 - 42845133
Alignment:
Q  12 tcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||| ||||||||||||||||||||||  ||| ||| || ||||||||||| ||||    
T  42845069 tcctctttataaactcttatcaagagtcttatctatctgatgtggtacttgagtttttcctaata 42845133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1233993 - 1233918
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| |||||||||| |||||| ||| ||||||||||| |||||| |||| ||| || || |||||| ||||||    
T  1233993 tgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggtttttaccaata 1233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6238005 - 6238040
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaaga 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  6238005 tgaggattgtctcctctatataaactcttatcaaga 6238040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 11018917 - 11018842
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataa 80  Q
    ||||||||||||| |||||| |||| ||||||||||||  |||  ||| ||| || ||| ||||||||||||||||    
T  11018917 gattgtctcctctttataaactcttctcaagagtcttagttatctgatgtgggacttgaatttttcccaataataa 11018842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29273262 - 29273337
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| |||| || |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  29273262 tgaggattgcctcccctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 29273337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38871192 - 38871267
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    |||||| || ||||||| |||||| | ||||||||||||||||||||  ||| ||| || || |||||||||||||    
T  38871192 tgaggagtgcctcctctttataaacttttatcaagagtcttatctatctgatgtgggacttgggtttttcccaata 38871267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15391886 - 15391828
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaac 59  Q
    ||||||||| ||||||| |||| | |||| ||||||||||||||||| |||| ||||||    
T  15391886 tgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtggaac 15391828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19863209 - 19863167
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttat 43  Q
    |||||||||  ||||||||||||| ||||||||||||||||||    
T  19863209 tgaggattgcttcctctatataaactcttatcaagagtcttat 19863167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 22892726 - 22892800
Alignment:
Q  2 gaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||| |||||||||| |||||| ||| ||||||||||| || |||| ||| ||| || || |||||||||||||    
T  22892726 gaggagtgtctcctctttataaagtctcatcaagagtctcatttatttgatgtgggacttgggtttttcccaata 22892800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 40073121 - 40073083
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttat 43  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  40073121 gattgtctcctctatataaactcttaccaagagtcttat 40073083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47086314 - 47086360
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    |||||| |||||| | |||||||| ||||||||||||||||||||||    
T  47086314 tgaggagtgtctcatgtatataaactcttatcaagagtcttatctat 47086360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29413415 - 29413370
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatcta 46  Q
    |||||| || ||||||| |||||| |||||||||||||||||||||    
T  29413415 tgaggagtgcctcctctttataaactcttatcaagagtcttatcta 29413370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 11581818 - 11581746
Alignment:
Q  5 gattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 77  Q
    ||||| ||||||| |||| ||| | |||||||||||||||||| |||| ||| |  ||||||||| |||||||    
T  11581818 gattgcctcctctttatatattttcatcaagagtcttatctatccgatgtgggatttgagttttttccaataa 11581746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 13959464 - 13959392
Alignment:
Q  6 attgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 78  Q
    ||||| |||||| |||||| |||| ||||||||||||||||| |||| ||  || || ||| |||||||||||    
T  13959464 attgtatcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgcgttattcccaataat 13959392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 40073571 - 40073499
Alignment:
Q  4 ggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||  ||||||   | || |||||||||||||    
T  40073571 ggattgtctcctctatataaactcttactaagagtctaatctatctgatatgaggcatgggtttttcccaata 40073499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13373 - 13298
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || ||||||||||||||||    
T  13373 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacctgagtttttcccaata 13298  T

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Target: scaffold0434; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13580 - 13505
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || |||||||||||||    
T  13580 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatttgggacttgggtttttcccaata 13505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2116 - 2162
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctat 47  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  2116 tgaggattgcctcctctatataaactcttatcaagagttttatctat 2162  T

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Target: scaffold0989 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2984 - 3058
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaat 75  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || ||||||||||||    
T  2984 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 3058  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 76919 - 76851
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagttttt 69  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||| ||| || || ||||||    
T  76919 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggttttt 76851  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21300 - 21376
Alignment:
Q  1 tgaggattgtctcctctatataaattcttatcaagagtcttatctattcgatatggaacgtgagt-ttttcccaata 76  Q
    ||||||||| ||||||| |||||| |||| ||||||||||| ||||| |||| ||| || || || |||||||||||    
T  21300 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtattttcccaata 21376  T

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