View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15655_low_43 (Length: 265)

Name: NF15655_low_43
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15655_low_43
NF15655_low_43
[»] chr2 (37 HSPs)
chr2 (11-165)||(239375-239528)
chr2 (13-171)||(11090537-11090695)
chr2 (11-166)||(43058354-43058509)
chr2 (11-171)||(26538113-26538273)
chr2 (11-171)||(40815714-40815874)
chr2 (11-165)||(40027162-40027316)
chr2 (11-171)||(22374336-22374496)
chr2 (11-163)||(1978132-1978284)
chr2 (11-171)||(18451200-18451360)
chr2 (11-171)||(3025482-3025641)
chr2 (14-171)||(14432158-14432315)
chr2 (13-171)||(28616629-28616788)
chr2 (13-171)||(8425732-8425889)
chr2 (13-171)||(26538450-26538608)
chr2 (27-166)||(7446730-7446870)
chr2 (46-171)||(20444765-20444890)
chr2 (31-166)||(7446363-7446497)
chr2 (27-171)||(18450846-18450991)
chr2 (27-171)||(40815361-40815506)
chr2 (27-171)||(22374709-22374854)
chr2 (27-171)||(28616998-28617143)
chr2 (27-171)||(40027524-40027669)
chr2 (46-166)||(35781067-35781187)
chr2 (27-171)||(239736-239881)
chr2 (46-171)||(35779724-35779849)
chr2 (28-171)||(3025848-3025991)
chr2 (27-166)||(43058717-43058856)
chr2 (27-171)||(11090904-11091049)
chr2 (46-171)||(20440436-20440560)
chr2 (70-171)||(28847123-28847224)
chr2 (28-163)||(8425379-8425514)
chr2 (61-163)||(1978528-1978630)
chr2 (45-171)||(15551515-15551641)
chr2 (27-171)||(14432525-14432670)
chr2 (46-171)||(8972253-8972378)
chr2 (47-162)||(15552459-15552573)
chr2 (11-150)||(28143400-28143538)
[»] chr7 (29 HSPs)
chr7 (11-171)||(19830436-19830596)
chr7 (11-171)||(19590541-19590701)
chr7 (11-171)||(37786783-37786943)
chr7 (11-171)||(29100220-29100380)
chr7 (13-171)||(32004985-32005143)
chr7 (13-171)||(34534162-34534320)
chr7 (11-171)||(38858659-38858819)
chr7 (13-166)||(35289272-35289425)
chr7 (13-171)||(2659211-2659369)
chr7 (11-171)||(4641456-4641616)
chr7 (11-171)||(23953099-23953258)
chr7 (11-166)||(4478070-4478224)
chr7 (27-171)||(19590909-19591054)
chr7 (27-171)||(38859025-38859170)
chr7 (27-166)||(2658860-2659000)
chr7 (29-171)||(37787153-37787296)
chr7 (27-171)||(29099866-29100011)
chr7 (28-171)||(32004630-32004774)
chr7 (27-171)||(19830804-19830948)
chr7 (49-171)||(28583455-28583577)
chr7 (28-165)||(35288925-35289063)
chr7 (27-171)||(34533807-34533952)
chr7 (27-171)||(4641828-4641970)
chr7 (45-171)||(38160967-38161093)
chr7 (46-166)||(28584326-28584446)
chr7 (27-171)||(23952746-23952892)
chr7 (11-57)||(35579028-35579074)
chr7 (13-53)||(32427393-32427432)
chr7 (11-99)||(35579256-35579344)
[»] chr1 (40 HSPs)
chr1 (11-171)||(50970647-50970807)
chr1 (11-171)||(18984135-18984295)
chr1 (11-171)||(5540188-5540347)
chr1 (11-166)||(29306974-29307128)
chr1 (11-171)||(15173112-15173272)
chr1 (11-171)||(21856412-21856572)
chr1 (11-171)||(29869636-29869796)
chr1 (11-171)||(33144288-33144448)
chr1 (22-171)||(15646575-15646724)
chr1 (11-171)||(5962947-5963107)
chr1 (11-171)||(9018989-9019149)
chr1 (11-171)||(17433232-17433392)
chr1 (11-171)||(8678911-8679070)
chr1 (11-162)||(39154044-39154195)
chr1 (11-171)||(29307311-29307471)
chr1 (13-166)||(26859431-26859583)
chr1 (23-171)||(9019343-9019492)
chr1 (27-171)||(15173478-15173622)
chr1 (25-171)||(17433597-17433744)
chr1 (27-171)||(29870003-29870148)
chr1 (27-171)||(33143933-33144078)
chr1 (29-171)||(50970294-50970437)
chr1 (13-127)||(4636033-4636146)
chr1 (27-171)||(5539832-5539977)
chr1 (27-171)||(8678557-8678702)
chr1 (27-171)||(21856058-21856203)
chr1 (28-171)||(4636356-4636500)
chr1 (27-171)||(15646208-15646353)
chr1 (27-163)||(18984503-18984640)
chr1 (27-171)||(39154404-39154549)
chr1 (70-163)||(26859083-26859176)
chr1 (47-171)||(52268306-52268430)
chr1 (27-171)||(5962594-5962739)
chr1 (174-246)||(39153917-39153989)
chr1 (87-162)||(47827033-47827108)
chr1 (71-171)||(52269177-52269277)
chr1 (27-129)||(17112339-17112442)
chr1 (104-163)||(2733419-2733478)
chr1 (17-51)||(17088516-17088550)
chr1 (60-144)||(39843196-39843280)
[»] scaffold0273 (2 HSPs)
scaffold0273 (11-165)||(4576-4730)
scaffold0273 (27-144)||(4246-4364)
[»] scaffold0295 (2 HSPs)
scaffold0295 (11-171)||(4809-4969)
scaffold0295 (27-171)||(5179-5320)
[»] chr6 (34 HSPs)
chr6 (11-171)||(10900299-10900459)
chr6 (11-171)||(20741116-20741276)
chr6 (11-171)||(11276951-11277111)
chr6 (11-171)||(18257153-18257313)
chr6 (11-171)||(15828010-15828170)
chr6 (11-163)||(31470685-31470837)
chr6 (13-171)||(12935528-12935686)
chr6 (27-171)||(2319688-2319832)
chr6 (11-171)||(28472653-28472812)
chr6 (11-171)||(29859842-29860001)
chr6 (11-171)||(11445003-11445163)
chr6 (13-171)||(1149802-1149961)
chr6 (11-165)||(2322588-2322741)
chr6 (11-171)||(18505288-18505448)
chr6 (11-165)||(10899961-10900115)
chr6 (27-171)||(11445371-11445516)
chr6 (27-171)||(12935173-12935318)
chr6 (27-171)||(22219737-22219882)
chr6 (27-171)||(23075512-23075657)
chr6 (24-160)||(4811399-4811535)
chr6 (22-171)||(23074015-23074153)
chr6 (27-171)||(18504935-18505080)
chr6 (51-163)||(3835135-3835247)
chr6 (11-164)||(11276613-11276766)
chr6 (27-171)||(20741485-20741633)
chr6 (45-166)||(29035040-29035161)
chr6 (27-166)||(31470336-31470476)
chr6 (70-171)||(18257565-18257666)
chr6 (46-166)||(18296166-18296285)
chr6 (34-171)||(15827654-15827794)
chr6 (45-171)||(29033450-29033577)
chr6 (61-166)||(4811675-4811780)
chr6 (99-166)||(1149486-1149553)
chr6 (12-94)||(35163557-35163639)
[»] chr5 (48 HSPs)
chr5 (11-171)||(2865124-2865284)
chr5 (11-171)||(8647454-8647614)
chr5 (11-171)||(18183338-18183498)
chr5 (11-171)||(5819298-5819458)
chr5 (11-171)||(19359152-19359312)
chr5 (11-171)||(24362205-24362365)
chr5 (11-163)||(15708995-15709146)
chr5 (11-165)||(8460952-8461106)
chr5 (25-171)||(29455125-29455271)
chr5 (11-162)||(164560-164711)
chr5 (15-171)||(14215616-14215772)
chr5 (22-171)||(15372253-15372402)
chr5 (11-162)||(24331929-24332083)
chr5 (22-166)||(14463901-14464044)
chr5 (27-165)||(18182992-18183131)
chr5 (26-165)||(25000112-25000251)
chr5 (27-171)||(5818945-5819090)
chr5 (27-162)||(24361862-24361997)
chr5 (27-171)||(8647822-8647967)
chr5 (27-171)||(19359520-19359665)
chr5 (27-162)||(24325237-24325372)
chr5 (27-171)||(14215257-14215402)
chr5 (27-163)||(2864778-2864915)
chr5 (27-171)||(8461315-8461460)
chr5 (27-163)||(29454764-29454901)
chr5 (11-165)||(16018611-16018763)
chr5 (25-162)||(25000471-25000609)
chr5 (28-171)||(164207-164350)
chr5 (27-171)||(24331575-24331722)
chr5 (49-166)||(4219684-4219800)
chr5 (27-163)||(15709353-15709489)
chr5 (25-171)||(16018969-16019116)
chr5 (45-171)||(7349420-7349546)
chr5 (174-246)||(24332139-24332211)
chr5 (49-162)||(6019177-6019290)
chr5 (47-165)||(4623170-4623286)
chr5 (28-166)||(15371892-15372030)
chr5 (48-166)||(4624631-4624749)
chr5 (61-171)||(7348575-7348685)
chr5 (67-171)||(4222147-4222251)
chr5 (48-171)||(6018330-6018452)
chr5 (45-135)||(13814131-13814225)
chr5 (11-70)||(24325580-24325639)
chr5 (61-102)||(14462689-14462730)
chr5 (11-57)||(16752711-16752757)
chr5 (27-140)||(28494891-28495003)
chr5 (27-99)||(10721873-10721945)
chr5 (61-149)||(17260364-17260452)
[»] chr3 (57 HSPs)
chr3 (11-171)||(39555946-39556106)
chr3 (13-171)||(20840576-20840734)
chr3 (11-171)||(5136996-5137156)
chr3 (11-171)||(31779021-31779181)
chr3 (11-171)||(37726945-37727105)
chr3 (11-171)||(41046716-41046876)
chr3 (11-171)||(24300925-24301085)
chr3 (32-165)||(48453011-48453144)
chr3 (11-171)||(23644478-23644638)
chr3 (11-166)||(25853596-25853751)
chr3 (13-171)||(43973457-43973614)
chr3 (11-171)||(27393946-27394106)
chr3 (13-171)||(32535330-32535492)
chr3 (11-163)||(26274936-26275087)
chr3 (11-171)||(26837725-26837884)
chr3 (11-171)||(22425182-22425342)
chr3 (11-171)||(30104498-30104657)
chr3 (11-171)||(17464860-17465021)
chr3 (27-171)||(20840945-20841090)
chr3 (27-171)||(27393677-27393822)
chr3 (27-171)||(43973824-43973969)
chr3 (27-171)||(4275748-4275893)
chr3 (27-171)||(37727314-37727459)
chr3 (27-171)||(39555594-39555739)
chr3 (27-171)||(22424830-22424975)
chr3 (46-171)||(25612381-25612506)
chr3 (25-166)||(29801798-29801940)
chr3 (27-171)||(5137365-5137510)
chr3 (27-171)||(31778669-31778814)
chr3 (27-171)||(32534975-32535120)
chr3 (27-171)||(17464507-17464652)
chr3 (27-171)||(25853250-25853395)
chr3 (27-162)||(41047083-41047218)
chr3 (66-165)||(29801378-29801477)
chr3 (27-160)||(26274594-26274728)
chr3 (27-160)||(26837387-26837521)
chr3 (27-171)||(23644849-23644994)
chr3 (27-171)||(30098147-30098292)
chr3 (27-167)||(24300576-24300717)
chr3 (46-171)||(51474737-51474863)
chr3 (45-166)||(50116812-50116933)
chr3 (48-164)||(23228414-23228529)
chr3 (47-171)||(32697106-32697229)
chr3 (46-171)||(37220573-37220698)
chr3 (59-162)||(18010162-18010265)
chr3 (46-165)||(25419166-25419285)
chr3 (43-129)||(25420542-25420628)
chr3 (45-124)||(23227319-23227398)
chr3 (49-171)||(45965954-45966076)
chr3 (73-171)||(51473444-51473542)
chr3 (111-171)||(37222040-37222100)
chr3 (10-57)||(49407925-49407972)
chr3 (11-82)||(55192222-55192293)
chr3 (25-71)||(29801532-29801578)
chr3 (11-150)||(27200062-27200200)
chr3 (11-94)||(37075781-37075864)
chr3 (60-160)||(32695730-32695830)
[»] chr8 (30 HSPs)
chr8 (11-171)||(12571879-12572040)
chr8 (11-171)||(19176659-19176819)
chr8 (11-165)||(13224663-13224816)
chr8 (14-171)||(41681150-41681306)
chr8 (11-171)||(9930026-9930186)
chr8 (11-171)||(33328174-33328334)
chr8 (11-171)||(44831614-44831774)
chr8 (13-171)||(11656471-11656630)
chr8 (22-171)||(31133236-31133385)
chr8 (13-140)||(33743290-33743417)
chr8 (11-171)||(9178005-9178164)
chr8 (27-171)||(13225023-13225168)
chr8 (11-165)||(4630161-4630309)
chr8 (27-171)||(19176306-19176451)
chr8 (27-171)||(9928925-9929070)
chr8 (27-171)||(44831263-44831408)
chr8 (27-171)||(11656841-11656986)
chr8 (27-171)||(41681518-41681663)
chr8 (28-171)||(31133605-31133749)
chr8 (27-171)||(12572235-12572380)
chr8 (27-171)||(33328524-33328669)
chr8 (27-171)||(33742938-33743082)
chr8 (29-171)||(34540934-34541077)
chr8 (33-168)||(4629816-4629952)
chr8 (49-166)||(10918147-10918264)
chr8 (79-165)||(11336959-11337045)
chr8 (46-108)||(43958264-43958326)
chr8 (46-171)||(8073956-8074080)
chr8 (27-95)||(9177724-9177793)
chr8 (12-57)||(18805292-18805337)
[»] chr4 (61 HSPs)
chr4 (11-171)||(4219573-4219733)
chr4 (11-171)||(33109700-33109860)
chr4 (11-171)||(11153516-11153676)
chr4 (11-171)||(46193774-46193934)
chr4 (11-171)||(22434547-22434705)
chr4 (17-165)||(25447611-25447759)
chr4 (11-171)||(25937686-25937846)
chr4 (11-171)||(38962189-38962348)
chr4 (11-171)||(48526212-48526371)
chr4 (11-165)||(15523603-15523757)
chr4 (22-171)||(23494459-23494608)
chr4 (11-171)||(12234345-12234505)
chr4 (11-171)||(22170306-22170465)
chr4 (11-162)||(51020822-51020973)
chr4 (11-165)||(45082454-45082606)
chr4 (11-165)||(2118665-2118818)
chr4 (11-119)||(12503805-12503913)
chr4 (11-171)||(54995437-54995596)
chr4 (25-171)||(46193421-46193568)
chr4 (27-171)||(22434195-22434340)
chr4 (27-171)||(25447263-25447408)
chr4 (27-171)||(45082808-45082953)
chr4 (28-171)||(15523251-15523395)
chr4 (27-171)||(11153162-11153307)
chr4 (27-171)||(12234713-12234858)
chr4 (27-171)||(48526565-48526710)
chr4 (71-171)||(23494872-23494972)
chr4 (27-171)||(4219943-4220088)
chr4 (27-171)||(18751615-18751760)
chr4 (27-171)||(20470895-20471040)
chr4 (46-171)||(44892552-44892677)
chr4 (27-171)||(54995085-54995230)
chr4 (27-166)||(51021180-51021319)
chr4 (27-166)||(12503457-12503597)
chr4 (28-163)||(25938056-25938192)
chr4 (46-166)||(43243685-43243804)
chr4 (45-168)||(48713749-48713872)
chr4 (61-171)||(33109883-33109993)
chr4 (27-163)||(2118317-2118454)
chr4 (45-166)||(20958264-20958383)
chr4 (49-166)||(43281198-43281314)
chr4 (70-166)||(35363028-35363125)
chr4 (46-171)||(48293610-48293735)
chr4 (51-163)||(16690960-16691072)
chr4 (73-171)||(18763951-18764049)
chr4 (46-132)||(43242325-43242411)
chr4 (51-163)||(16691481-16691592)
chr4 (46-165)||(48294946-48295066)
chr4 (46-163)||(44890541-44890658)
chr4 (11-78)||(18751971-18752038)
chr4 (49-171)||(20957205-20957327)
chr4 (51-163)||(48708319-48708431)
chr4 (46-126)||(44220781-44220861)
chr4 (11-99)||(17504061-17504149)
chr4 (61-171)||(10258306-10258416)
chr4 (117-171)||(16318251-16318305)
chr4 (11-51)||(17504329-17504369)
chr4 (11-51)||(35193443-35193483)
chr4 (79-166)||(55189549-55189636)
chr4 (46-171)||(30597925-30598049)
chr4 (11-44)||(40160236-40160269)
[»] scaffold0951 (2 HSPs)
scaffold0951 (13-171)||(1683-1841)
scaffold0951 (27-171)||(2051-2196)
[»] scaffold0019 (1 HSPs)
scaffold0019 (11-171)||(134042-134202)
[»] scaffold0007 (3 HSPs)
scaffold0007 (11-171)||(64318-64478)
scaffold0007 (72-171)||(64735-64834)
scaffold0007 (11-160)||(205738-205886)
[»] scaffold0417 (2 HSPs)
scaffold0417 (11-166)||(10642-10797)
scaffold0417 (27-171)||(11007-11152)
[»] scaffold0027 (2 HSPs)
scaffold0027 (11-166)||(42528-42682)
scaffold0027 (11-169)||(42187-42345)
[»] scaffold1223 (2 HSPs)
scaffold1223 (11-165)||(775-928)
scaffold1223 (11-166)||(1110-1265)
[»] scaffold0432 (1 HSPs)
scaffold0432 (11-171)||(10242-10401)
[»] scaffold0176 (2 HSPs)
scaffold0176 (25-162)||(18860-18996)
scaffold0176 (90-171)||(19069-19150)
[»] scaffold0157 (2 HSPs)
scaffold0157 (11-119)||(16564-16672)
scaffold0157 (27-166)||(16880-17020)
[»] scaffold0113 (1 HSPs)
scaffold0113 (61-165)||(28662-28766)
[»] scaffold1585 (1 HSPs)
scaffold1585 (45-166)||(588-709)
[»] scaffold0168 (1 HSPs)
scaffold0168 (45-129)||(7691-7775)
[»] scaffold0057 (2 HSPs)
scaffold0057 (46-166)||(61862-61982)
scaffold0057 (113-166)||(61049-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (46-165)||(471-589)
[»] scaffold0076 (1 HSPs)
scaffold0076 (84-162)||(8451-8529)


Alignment Details
Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 239528 - 239375
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  239428 gttttgttctgtttt-aaaaggcaggaccagtttcgtgagtaggccaaaacacga 239375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 11090695 - 11090537
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggacca 11090537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 43058509 - 43058354
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgag 43058354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 26538273 - 26538113
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    | ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggacca 26538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 40815714 - 40815874
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggacca 40815874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 40027316 - 40027162
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacga 40027162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 22374496 - 22374336
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 22374336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 1978284 - 1978132
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacac 1978132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 18451200 - 18451360
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 18451360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 3025641 - 3025482
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||||  |||| |||||||| ||||||||||||||||||||| ||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 3025482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 14432315 - 14432158
Alignment:
Q  14 ataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  114 ttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||| | |||||||| ||||  ||||||||  |||||||||||||||||||| ||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggacca 14432158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 28616788 - 28616629
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccg 111  Q
    |||||||| ||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  112 ttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 28616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 8425732 - 8425889
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||    
T  8425732 catagggg-taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagt 8425830  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||| ||||| |||| ||| |||||||| ||||||||| |||||||    
T  8425831 tttgttctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaacca 8425889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 26538450 - 26538608
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccg 111  Q
    |||||||| |||||||||||||||||||||||||||||| ||| |  | |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26538450 catagggg-taggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 26538548  T
Q  112 ttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||| | ||||| |||||||| ||||||||||||||||||||| ||||    
T  26538549 ttttgttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 26538608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 7446730 - 7446870
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||||||||||||||||||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||| ||||| |||||||| ||||||| | |||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgag 7446870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 20444890 - 20444765
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||     
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    |||||| |||||||||||||| ||||    
T  20444790 gtgagttggccaaaacacgaggacca 20444765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 7446497 - 7446363
Alignment:
Q  31 aactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaa 130  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||| || |||||||||||||||||||||||     
T  7446497 aactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaag 7446399  T
Q  131 ggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||| |||| |||  ||||||| ||||||||||||    
T  7446398 ggcaggaccaatttcatgagtagaccaaaacacgag 7446363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 18450991 - 18450846
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||| | |||||||| ||||||||||||||||||||| ||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggacca 18450846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 40815506 - 40815361
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  ||||| | || ||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 40815361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 22374709 - 22374854
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||| ||| | |||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||| ||| ||||||||||||||||||||| ||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggacca 22374854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 28616998 - 28617143
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||  |||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 28617097  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| | |||||||||||| ||||||||||||||||||||| ||||    
T  28617098 aaaaggacagaaccagtttcgtgagtaggccaaaacacgaggacca 28617143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 40027524 - 40027669
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| |||||| |||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 40027623  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  40027624 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 40027669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 35781067 - 35781187
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||  |||| |||     
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  146 gtgagtaggccaaaacacgag 166  Q
    |||||||||||||||||||||    
T  35781167 gtgagtaggccaaaacacgag 35781187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 239736 - 239881
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 239881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 35779849 - 35779724
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||| ||||| |||| |||     
T  35779849 gcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    ||||||| | ||||||||||| ||||    
T  35779749 gtgagtatgtcaaaacacgaggacca 35779724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 3025848 - 3025991
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||||||||||||||| ||| |||||  | ||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||| |||||||||| ||| ||||||| ||||||||||||| ||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggacca 3025991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 43058717 - 43058856
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||  |||| |||||||| |||||||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgag 43058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 11090904 - 11091049
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||| |||||||| ||||||||| |||||  | ||||| || | ||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgtttt 11091003  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  11091004 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 11091049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 20440436 - 20440560
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| ||||| |||||| ||||||||||| ||||||||||||||||| | || ||||||||||||||||||||||| ||||| ||||||||     
T  20440436 gcgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 20440534  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    |||||| |||||||||||||| ||||    
T  20440535 gtgagttggccaaaacacgaggacca 20440560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 28847123 - 28847224
Alignment:
Q  70 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||| |||||||| |||||||| |||||||||||| ||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  170 ca 171  Q
    ||    
T  28847223 ca 28847224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 8425514 - 8425379
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaag-accgttttgttctgtttta 8425416  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    |||||| |  |||| ||| ||||||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacac 8425379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 1978528 - 1978630
Alignment:
Q  61 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    ||||| || |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||| ||| |||||||||||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  161 cac 163  Q
    |||    
T  1978628 cac 1978630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 15551641 - 15551515
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| | ||||||  ||||||| |||||||||||||||  |||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  145 tgtgagtaggccaaaacacgagaacca 171  Q
     |||||||  |||||||||||| ||||    
T  15551541 cgtgagtaaaccaaaacacgaggacca 15551515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 14432525 - 14432670
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| |||||||||||||||||| |||||| ||| ||| |||| |||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  ||||||||  |||||||||||||||||||| ||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggacca 14432670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 8972378 - 8972253
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| || |||  |||||||||||||| ||| ||||  |||| |||     
T  8972378 gcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    ||||| | ||||||||||||| ||||    
T  8972278 gtgagcatgccaaaacacgaggacca 8972253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 15552459 - 15552573
Alignment:
Q  47 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttg 146  Q
    |||||||||||   ||||||| |||||||||||||||| ||||||||||||||||| || |||  |||||||||||||||||| ||| | | || ||| |    
T  15552459 cgtttttggagggcaaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcg 15552557  T
Q  147 tgagtaggccaaaaca 162  Q
    ||||||||||||||||    
T  15552558 tgagtaggccaaaaca 15552573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 28143400 - 28143538
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||   ||||| ||  ||||||| |||| ||||| ||| |||||| || | ||||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgag 150  Q
     ||||||||  ||| ||| |||||| |||| ||| |||||    
T  28143499 attttgttcgatttgaaagaggcaggaccattttcgtgag 28143538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 19830596 - 19830436
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 19830436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 19590701 - 19590541
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 19590541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 37786943 - 37786783
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 37786783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 29100220 - 29100380
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||| ||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggacca 29100380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 32004985 - 32005143
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||| ||||  |||||||| ||||||| ||||||||| ||| ||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggacca 32005143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 34534162 - 34534320
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||| | |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||  ||||| | |||||| ||||||||||||||||||||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaacca 34534320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 38858819 - 38858659
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||||  |||| |||||||| ||||||| ||||||||||||| ||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacca 38858659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 35289272 - 35289425
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| ||||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 35289425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 2659211 - 2659369
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||| ||||  ||||||||  ||| ||||||||||| |||| ||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggacca 2659369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 4641616 - 4641456
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||||||  |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| ||||| ||||  |||| |||||||| ||||||| ||||||||||||| ||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggacca 4641456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 23953099 - 23953258
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  23953099 agcatagggg-tatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 23953197  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||| ||| ||| | |||||||| ||||||||  ||||||||||| ||||    
T  23953198 gttttgttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggacca 23953258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 4478070 - 4478224
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||| ||||||     
T  4478070 agcatagggg-taggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggaca 4478168  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
     | || ||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  4478169 atgttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 4478224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 19590909 - 19591054
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtacca 19591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 38859025 - 38859170
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 38859170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 2659000 - 2658860
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| |||||||||||||||||||||  | ||||| || |||| |||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgag 2658860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 37787153 - 37787296
Alignment:
Q  29 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaa 127  Q
    ||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  128 aaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||  |||| |||||||| ||||||||||||||||||||| ||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 37787296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 29100011 - 29099866
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||| ||| ||||| ||| |  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 29099866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 32004774 - 32004630
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||||||||||||||||||| |||||  | ||||| || |||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||| ||||| | || ||| ||||||||||||||||||||| ||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggacca 32004630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 19830804 - 19830948
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| | ||| |||||||||||||||||||||||||||||| ||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggacca 19830948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 28583577 - 28583455
Alignment:
Q  49 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtg 148  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| || |||||||||| |||||||||| | |  ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  149 agtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||| ||||    
T  28583477 agtaggccaaaacacgaggacca 28583455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 165
Target Start/End: Complemental strand, 35289063 - 35288925
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    ||||||||||||||||||| |||| |||||  | |||||  |  |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  35289063 taaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 35288964  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||| ||||| |||||||| ||||||||||||||| ||||    
T  35288963 aaagggcaggaccagtttcgtgagtaggccaaaatacga 35288925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 34533952 - 34533807
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||| ||||||||||||||||||||||||  | ||||| || ||||||||| ||||||||||||||||||||||| || |||| |||| |||||||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgtttt 34533853  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||  |||  |||||||| ||||||||||||||||||||| ||||    
T  34533852 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggacca 34533807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 4641828 - 4641970
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| | |||  | ||||| ||  ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| | ||| |||||   |||||||||||||||||||||| ||||    
T  4641928 aaaaggacaggaccag---tgtgagtaggccaaaacacgaggacca 4641970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 38161093 - 38160967
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||| ||||| |  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  145 tgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||| |||| ||||    
T  38160993 cgtgagtaggccaaaacccgaggacca 38160967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 28584326 - 28584446
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||  |||||||||||||||||| | ||  |||| |||     
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  146 gtgagtaggccaaaacacgag 166  Q
    |||| ||||||||| ||||||    
T  28584426 gtgaataggccaaagcacgag 28584446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 23952892 - 23952746
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||| |||||||||||||||| ||| |  | ||||| |  |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  23952892 ctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtttt 23952793  T
Q  126 aaaaaggcagaaccagttttgtgagta-ggccaaaacacgagaacca 171  Q
    |||| ||||  |||| ||| ||||||| || ||||||||||| ||||    
T  23952792 aaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggacca 23952746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 35579074 - 35579028
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggag 57  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggag 35579028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 32427393 - 32427432
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgttttt 53  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  32427393 catagggg-taggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 35579256 - 35579344
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgata 99  Q
    |||||||||| ||||||||||||||| ||||| |||||||||| |||   ||||| || |||| ||| |||| ||||| ||| ||||||    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgata 35579344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 50970647 - 50970807
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 50970807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 18984295 - 18984135
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||| ||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggacca 18984135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 5540188 - 5540347
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5540188 agcatagggg-taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5540286  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||| ||||||||||||| | ||| |||||||| ||||||||||||||||||||| ||||    
T  5540287 gttttcttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggacca 5540347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 29307128 - 29306974
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29307128 agcatagggg-taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29307030  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||||||||||||||||| | ||  |||||||| |||||||||||||||||||||    
T  29307029 gttttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgag 29306974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 15173272 - 15173112
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||  |||||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggacca 15173112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 21856412 - 21856572
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||||||||| | ||||||  |||||||||||||||||||| ||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggacca 21856572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 29869796 - 29869636
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  |||||||| ||||||| ||||||||||||| ||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggacca 29869636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 33144288 - 33144448
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 33144448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 15646575 - 15646724
Alignment:
Q  22 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15646575 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctg 15646674  T
Q  122 ttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| || || | |||||| ||||||||||||||||||||| ||||    
T  15646675 ttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggacca 15646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 5962947 - 5963107
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||| |||||||| ||||  | |||||| ||||||||||||||||||||| ||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 5963107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 9019149 - 9018989
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||| ||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||||||| ||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggacca 9018989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 17433392 - 17433232
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||    ||||||  |||||||||||||||| ||| ||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggacca 17433232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 8678911 - 8679070
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||| || ||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||||| ||||| |||||||  ||||||||||||||||||||| ||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggacca 8679070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 39154195 - 39154044
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    ||||||||||||||||||| ||||  | |||||| ||||||| |||||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaaca 39154044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 29307311 - 29307471
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggac 109  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||    
T  29307311 agcatagggg-taggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggac 29307409  T
Q  110 cgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||| ||||    
T  29307410 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggacca 29307471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 26859431 - 26859583
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||| | ||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
     |||||||||||||||| ||||| |  ||||| |||||||| ||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgag 26859583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 9019343 - 9019492
Alignment:
Q  23 aggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctg 121  Q
    |||||||||||||| |||||||||||||| ||| |  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  9019343 aggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctg 9019442  T
Q  122 ttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  9019443 ttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggacca 9019492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 15173478 - 15173622
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     ||||||||| |||||||||||||||||||||||||||||| ||||    
T  15173578 -aaaaggcaggaccagttttgtgagtaggccaaaacacgaggacca 15173622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 17433597 - 17433744
Alignment:
Q  25 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtt 123  Q
    ||||||||||||||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  124 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||| ||||  |||||||| |||||||||||| |||||||| ||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggacca 17433744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 29870003 - 29870148
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |  ||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| ||||||||  |||||||||||||||||||| ||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggacca 29870148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 33144078 - 33143933
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| | |||  | ||||| || |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 33143933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 50970437 - 50970294
Alignment:
Q  29 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaa 127  Q
    ||||||||||||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  128 aaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||  |||| |||||||| ||||||||||||||||||||| ||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 50970294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| || ||||||||     
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg- 4636048  T
Q  113 tttgttctgttttaa 127  Q
    |||||||||||||||    
T  4636047 tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 5539977 - 5539832
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||| ||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5539977 ctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 5539878  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  5539877 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 5539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 8678702 - 8678557
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||| ||||||| || ||  | ||||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  8678702 ctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 8678603  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  8678602 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 8678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 21856203 - 21856058
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||  ||||||||||| ||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacca 21856058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 4636356 - 4636500
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 4636500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 15646353 - 15646208
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||| ||| |||||  | |||||  | ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgtttt 15646254  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  15646253 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 15646208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 18984503 - 18984640
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| |||||||||| |||| | |||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18984503 ctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18984602  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    |||| ||||| |||| ||| ||||||||||||||||||    
T  18984603 aaaagggcaggaccaatttcgtgagtaggccaaaacac 18984640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 39154404 - 39154549
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||| |||||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgtttt 39154503  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||  |||| |||||||| ||||||||||||||||||||| ||||    
T  39154504 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 39154549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 26859176 - 26859083
Alignment:
Q  70 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacac 26859083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 52268430 - 52268306
Alignment:
Q  47 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttg 146  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||||||||||||| ||||| |||| ||| |    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  147 tgagtaggccaaaacacgagaacca 171  Q
    |||| ||||||||| ||||| ||||    
T  52268330 tgagcaggccaaaatacgaggacca 52268306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 5962739 - 5962594
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||| ||||| |||| |||||  | ||||| || ||||| |||||||||||||||||||||||| || || |||||||||||||||||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgtttt 5962640  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||| | |||||||| |||| ||| ||| |||||||| ||||    
T  5962639 aaaagggccggaccagtttcgtgaatagaccataacacgaggacca 5962594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 39153989 - 39153917
Alignment:
Q  174 ctccctgtcttaatcatctttcggaatgaatggtccaaagatctcattatttacaatgaccaaataatcaaca 246  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39153989 ctccctatcttaatcatctttcataatgaatggtccaaagatctcattatttacaatgaccaaataatcaaca 39153917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 47827033 - 47827108
Alignment:
Q  87 aacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||  |||| ||| |||||||||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaaca 47827108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 52269177 - 52269277
Alignment:
Q  71 gtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacc 170  Q
    |||||||||||| ||||||||||||||||| | || |||  |||||||||||||||||| |||||||||  |||  |||||| | ||||||||||| |||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  171 a 171  Q
    |    
T  52269277 a 52269277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 17112442 - 17112339
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||| |||||| ||||||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||| ||||||  |||| |||| ||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctatttt 17112343  T
Q  126 aaaa 129  Q
    ||||    
T  17112342 aaaa 17112339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 2733419 - 2733478
Alignment:
Q  104 aaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    |||||||||||||||||||||||||| ||||| |||| ||| | || |||||||||||||    
T  2733419 aaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacac 2733478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  17 ggggataggtctaaaactgtcatttctctgcgttt 51  Q
    |||| ||||||||||||||||||||||||||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 39843280 - 39843196
Alignment:
Q  60 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    |||||||||||  ||||| |||| ||||| ||| |||||| |  | ||||||||||||||  ||| |||||||||| ||||||||    
T  39843280 taaaatgggggtaaggaccaaaagtgcaaaaaacatgatagtatagggaccgttttgttcgatttgaaaaaggcaggaccagttt 39843196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 4576 - 4730
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacga 4730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 4364 - 4246
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||| ||||| |||  | ||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  126 aaaaaggcagaaccagttt 144  Q
    |||| ||||| ||||||||    
T  4264 aaaagggcaggaccagttt 4246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 129; Significance: 8e-67; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 4969 - 4809
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 4809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 5179 - 5320
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||| ||||||||| |||||  | ||||| ||    |||||||||||||||||||||||||||||| ||  |||||||| |||||||||    
T  5179 ctaaaactgtcatttttctgcgtttctggagtttgaaaatagg----aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgtttt 5274  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| | ||  |||||||| |||| |||||||||||||||| ||||    
T  5275 aaaaggacaagaccagtttcgtgactaggccaaaacacgaggacca 5320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 8e-67; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 10900299 - 10900459
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  |||||||| ||||||||||||||| ||||| ||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggacca 10900459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 20741276 - 20741116
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 20741116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 11276951 - 11277111
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||| ||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggacca 11277111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 18257313 - 18257153
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||| ||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggacca 18257153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 15828010 - 15828170
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||||| || |  |||||||| ||||||||||||||||||||| ||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggacca 15828170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 31470685 - 31470837
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacac 31470837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 12935528 - 12935686
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||| |||||||| |||||||| ||||||| ||||||||||||| ||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggacca 12935686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 2319832 - 2319688
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 2319688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 28472812 - 28472653
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||||| ||||| |||| ||| |||||| |||||||||||||| ||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggacca 28472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 29860001 - 29859842
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||||| ||||| |||| ||| |||||| |||||||||||||| ||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggacca 29859842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 11445163 - 11445003
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||| ||||||||||||  ||||| ||||| || ||||||||||||||||||||| ||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggacca 11445003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 1149802 - 1149961
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttt-tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccg 111  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  112 ttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||| |||||||| ||||  ||||||||  ||||||||| |||||||||| ||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggacca 1149961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 2322588 - 2322741
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||||||  |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgtttt-ggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||||||||||||||||||||||||  || ||||| |||||||| |||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacga 2322741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 18505288 - 18505448
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||| | |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||||| ||||| | |||||| |||||||| |||||||||||| ||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggacca 18505448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 10900115 - 10899961
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggac 109  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||    
T  10900115 agcatagggg-taggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggac 10900017  T
Q  110 cgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  10900016 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacga 10899961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 11445371 - 11445516
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacca 11445516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 12935318 - 12935173
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 12935173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 22219737 - 22219882
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 22219882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 23075512 - 23075657
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||| |||||||||  ||||| | || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 23075657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 4811535 - 4811399
Alignment:
Q  24 ggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtt 123  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||| ||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  124 ttaaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    |||||| ||||  |||||||| |||||||| ||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaa 4811399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 23074153 - 23074015
Alignment:
Q  22 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctg 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||           |||||||||| |||||||||||||||||     
T  23074153 taggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaa-----------aatgataattgaaggaccgttttgttcta 23074065  T
Q  122 ttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  23074064 ttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 23074015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 18505080 - 18504935
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||| | ||| | |||  | ||||| || |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  18505080 ctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgtttt 18504981  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||    
T  18504980 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacca 18504935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 3835135 - 3835247
Alignment:
Q  51 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgag 150  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| |||||| |||| ||| |||||    
T  3835135 tttggaggataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgag 3835234  T
Q  151 taggccaaaacac 163  Q
    |||| ||||||||    
T  3835235 taggtcaaaacac 3835247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 11276766 - 11276613
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggac 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||  | ||||| || |||||||||||||||| ||||||||||| |||| ||||||    
T  11276766 agcatagggg-taggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggac 11276668  T
Q  110 cgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacg 164  Q
    | |||||||||||||||||| || || | ||||||  ||||||| ||||||||||    
T  11276667 cattttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacg 11276613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 20741485 - 20741633
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa---atgataattaaaggaccgttttgttctgt 122  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||| ||||   ||||||||| |||||||||||||||||||    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  123 tttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 20741633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 29035040 - 29035161
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    ||||||||||||| | ||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||| |||| ||||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  145 tgtgagtaggccaaaacacgag 166  Q
     |||||||||| ||||||||||    
T  29035140 cgtgagtaggctaaaacacgag 29035161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 31470476 - 31470336
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||| |||||| || ||| |||||||||||||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||  |||  |||||||| |||||||||||||||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgag 31470336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 18257565 - 18257666
Alignment:
Q  70 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 169  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||| ||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  170 ca 171  Q
    ||    
T  18257665 ca 18257666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 18296285 - 18296166
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||  | || ||||    
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  146 gtgagtaggccaaaacacgag 166  Q
    ||||||| | |||||||||||    
T  18296186 gtgagtaagtcaaaacacgag 18296166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 15827794 - 15827654
Alignment:
Q  34 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt--tttgttctgttttaaaaa 130  Q
    |||||||| ||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| || |||||||||  |||||| ||||||||||     
T  15827794 tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaag 15827695  T
Q  131 ggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    | |||||||||||| ||||||| ||||||||||||| ||||    
T  15827694 gacagaaccagtttcgtgagtaagccaaaacacgaggacca 15827654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 29033577 - 29033450
Alignment:
Q  45 tgcgtttttggag-aataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtt 143  Q
    ||||||||||||| || |||||||||||||||| ||||  ||||||||||||||||| | |||||| ||||||||||||||||||| ||||| |||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  144 ttgtgagtaggccaaaacacgagaacca 171  Q
    | ||||| ||||||||| ||||| ||||    
T  29033477 tcgtgagcaggccaaaatacgaggacca 29033450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 4811675 - 4811780
Alignment:
Q  61 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    ||||| || |||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  | ||||||  ||||||||||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  161 cacgag 166  Q
    ||||||    
T  4811775 cacgag 4811780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 1149553 - 1149486
Alignment:
Q  99 aattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||| ||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 1149486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 35163557 - 35163639
Alignment:
Q  12 gcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 94  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||   ||||| || |||||||| |||| ||||| |||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 8e-67; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 2865124 - 2865284
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 2865284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 8647614 - 8647454
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggacca 8647454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 18183338 - 18183498
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 18183498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 5819298 - 5819458
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 5819458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 19359312 - 19359152
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||| ||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggacca 19359152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 24362205 - 24362365
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||| ||||||||||||| ||||| |||||||| ||||||||||||||| ||||| ||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggacca 24362365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 15709146 - 15708995
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacac 15708995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 8461106 - 8460952
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacga 8460952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 29455125 - 29455271
Alignment:
Q  25 gtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttt 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  29455125 gtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttt 29455224  T
Q  125 taaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||| ||||| |||||||| |||||||| |||||||||||| ||||    
T  29455225 taaaagggcaggaccagtttcgtgagtagaccaaaacacgaggacca 29455271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 164560 - 164711
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    ||||||||||||||||||| ||||  |||||||| |||||| ||||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaaca 164711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 14215616 - 14215772
Alignment:
Q  15 taggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttt 114  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| || |||||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  115 tgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||| ||||| | |||||| ||||||||| ||||||||||| ||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggacca 14215772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 15372253 - 15372402
Alignment:
Q  22 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctg 121  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  |||| || ||||||||||||||||||||| || ||||||||||||||||||    
T  15372253 taggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctg 15372352  T
Q  122 ttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  15372353 ttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 15372402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 24331929 - 24332083
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacg-aaaaatgcaac-aaaaatgataattaaagga 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||  ||||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  109 ccgttttgttctgtttt-aaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    ||||||||||||||||| |||||||||| | |||||| ||||||| |||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaaca 24332083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 14463901 - 14464044
Alignment:
Q  22 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||     
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggg-taggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  122 ttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||||||| | || ||  ||||| |||||||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgag 14464044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 18183131 - 18182992
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| ||| | |||||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    |||| ||||  |||||||| ||||||||||||||||||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacga 18182992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 25000251 - 25000112
Alignment:
Q  26 tctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| |||||||||    
T  25000251 tctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggaccattttattctgtttt 25000152  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    || | ||||  ||||  || ||||||||||||||||||||    
T  25000151 aacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 5819090 - 5818945
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 5818945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 24361997 - 24361862
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
     || ||||  | |||||| ||| |||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaaca 24361862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 8647822 - 8647967
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| |  |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 8647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 19359520 - 19359665
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgtttt 19359619  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  19359620 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 19359665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 24325372 - 24325237
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| || ||||||| |||||||||||||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
     || ||||  | |||||| ||| |||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaaca 24325237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 14215402 - 14215257
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| || | ||||||||| ||||||| ||||||||||||| ||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggacca 14215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 2864915 - 2864778
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    |||| ||||  | || ||| ||||||||||||||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacac 2864778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 8461315 - 8461460
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||| |||||||||||||||||| |||||  | ||||| || |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgtttt 8461414  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||  |||| | |||||| ||||||||||||||||||||| ||||    
T  8461415 aaaagagcaggaacagtttcgtgagtaggccaaaacacgaggacca 8461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 29454901 - 29454764
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||| |||||||||||||||| |||||  | ||||| || |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    |||| ||||  |||| ||| ||||||||||||||||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacac 29454764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 16018763 - 16018611
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||| |||   |||||||||||||||||| ||||||||||| ||||||||| |||||| |||||| |||||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatg-ggggtaggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    |||||||||| |||||||| ||||  | || ||| |||| |||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacga 16018611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 25000471 - 25000609
Alignment:
Q  25 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtt 123  Q
    |||||||||||||||||||||||||||||||||  | ||||| || ||| ||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  124 ttaaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    ||||||   ||  |||| ||| |||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaaca 25000609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 164350 - 164207
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    ||||| |||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||| || |||||||||||| |||| ||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttata 164252  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||| ||||| |||||||| ||||||||| ||||||||||| ||||    
T  164251 aaagggcaggaccagtttcgtgagtaggtcaaaacacgaggacca 164207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 24331722 - 24331575
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaat--gataattaaaggaccgttttgttctgtt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||| |||||||||||||||||   ||||||| ||||||||||||||||||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  124 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||| ||||| |||||||| ||||||||  ||||||||||| ||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacca 24331575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 4219800 - 4219684
Alignment:
Q  49 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtg 148  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||  |||| ||||||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  149 agtaggccaaaacacgag 166  Q
    | ||| ||||||||||||    
T  4219701 aatagcccaaaacacgag 4219684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 15709353 - 15709489
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||||||||||| || |||||  | ||||| || ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
     ||| ||||  || |||||  |||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacac 15709489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 16018969 - 16019116
Alignment:
Q  25 gtctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtt 123  Q
    ||||||||||||||||||||||||||| |||||  ||||| | || ||||||||||||||| ||||||||||||||||| ||| ||| |||| |||| ||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  124 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||  |||| |||| ||| ||||||| ||||||||| ||| ||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggacca 16019116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 7349420 - 7349546
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||| | |||||  |||||||| ||||||||||  |||| |||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  145 tgtgagtaggccaaaacacgagaacca 171  Q
     |||||||| |||||||||||| ||||    
T  7349520 cgtgagtagaccaaaacacgaggacca 7349546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 24332139 - 24332211
Alignment:
Q  174 ctccctgtcttaatcatctttcggaatgaatggtccaaagatctcattatttacaatgaccaaataatcaaca 246  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24332139 ctccctatcttaatcatctttcataatgaatggtccaaagatctcattatttacaatgaccaaataatcaaca 24332211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 6019177 - 6019290
Alignment:
Q  49 tttttggagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgt 147  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||  |||  | |||||| ||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  148 gagtaggccaaaaca 162  Q
    ||||| |||||||||    
T  6019277 gagta-gccaaaaca 6019290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 4623286 - 4623170
Alignment:
Q  47 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttg 146  Q
    ||||||||||| |||||||||||  ||||||| ||||||| | ||||||||||||| ||||||  ||||||||||||||||| |||||| |||| ||| |    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  147 tgagtaggccaaaacacga 165  Q
    |||||| | ||||||||||    
T  4623188 tgagtaagtcaaaacacga 4623170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 15372030 - 15371892
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaata-aaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    ||||||| |||||||||||||||| | |||  |  |||| || ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  15372030 taaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 15371931  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||| ||||| ||||  || |||||||| |||||| |||||    
T  15371930 aaagggcaggacca-attcgtgagtagaccaaaatacgag 15371892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 166
Target Start/End: Original strand, 4624631 - 4624749
Alignment:
Q  48 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgt 147  Q
    ||||||| || |||||||||||||||||||||||||||||||| ||||||||||| || ||  |||||||| ||||||||| || ||  |||| ||| ||    
T  4624631 gtttttgaaggataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgt 4624730  T
Q  148 gagtaggccaaaacacgag 166  Q
    |||||||  ||||||||||    
T  4624731 gagtaggttaaaacacgag 4624749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 7348685 - 7348575
Alignment:
Q  61 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    |||||||||||||||||||||| |||||||||||||||||   |||||  ||||||||||||||||||| ||||  |||| ||| |||||||| | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  161 cacgagaacca 171  Q
    || ||| ||||    
T  7348585 catgaggacca 7348575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 4222147 - 4222251
Alignment:
Q  67 gggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||||||||||||||||||||| ||||||||||| | || |||  |||||||||||||||||| ||||  |||| ||| ||||| || ||||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  167 aacca 171  Q
     ||||    
T  4222247 gacca 4222251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 6018452 - 6018330
Alignment:
Q  48 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgt 147  Q
    ||||||||||   ||||| | ||||||||| |||| ||||||||||||||||||| ||| |   |||||||||||||||||| | ||  |||||||| ||    
T  6018452 gtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgt 6018354  T
Q  148 gagtaggccaaaacacgagaacca 171  Q
    ||||||  ||||||||||||||||    
T  6018353 gagtagaacaaaacacgagaacca 6018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 13814131 - 13814225
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt-aaag----gaccgttttgttctgttttaaaaaggcag 135  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||    ||| ||||||||||| ||||||| |||||    
T  13814131 tgcgtttttggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaaagacatgacagttttgttctgatttaaaagggcag 13814225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 24325580 - 24325639
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg 70  Q
    ||||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggagaataaaatggggg 24325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 14462730 - 14462689
Alignment:
Q  61 aaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 102  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 14462689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 16752757 - 16752711
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggag 57  Q
    |||||||||| ||||||||||||| |||||||| ||||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggag 16752711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 28495003 - 28494891
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||| ||||| |||||||||||| |||||   ||||| || |||||||| |||| ||||| ||| |||||| ||  ||||| |||||||||  ||| |    
T  28495003 ctaaaattgtcacttctctgcgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacagttttgttcgatttga 28494905  T
Q  127 aaaaggcagaacca 140  Q
    || |||||||||||    
T  28494904 aagaggcagaacca 28494891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 10721945 - 10721873
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgata 99  Q
    ||||||||||||||||||| ||||| |||||   ||||| || |||||||| |||| ||||| ||| ||||||    
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgata 10721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 17260452 - 17260364
Alignment:
Q  61 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtga 149  Q
    ||||| ||||||||||| |||| ||||| ||| ||||||||| | ||||  ||||||||  ||| ||| | ||||||||| ||||||||    
T  17260452 aaaatagggggtaggactaaaactgcaaaaaacatgataatttatggacaattttgttcgatttgaaagatgcagaaccatttttgtga 17260364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 8e-67; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 39555946 - 39556106
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 39556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 20840734 - 20840576
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacca 20840576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 5137156 - 5136996
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  |||| ||| |||||| |||||||||||||| ||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggacca 5136996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 31779021 - 31779181
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 31779181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 37727105 - 37726945
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||||| |||||||||||||| || || || |||||||||||| ||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggacca 37726945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 41046876 - 41046716
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  |||||||| || | |||||||||||||||| ||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggacca 41046716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 24300925 - 24301085
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggacca 24301085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 48453144 - 48453011
Alignment:
Q  32 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaag 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatg 48453045  T
Q  132 gcagaaccagttttgtgagtaggccaaaacacga 165  Q
    |||| |||||||| ||||||||||||||||||||    
T  48453044 gcaggaccagtttcgtgagtaggccaaaacacga 48453011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 23644638 - 23644478
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||| ||| ||||||||||||||| ||||| ||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggacca 23644478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 25853596 - 25853751
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
     |||||||||||||||||| | ||  |||||||| ||||||||  |||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgag 25853751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 43973614 - 43973457
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43973614 catagggg-taggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 43973516  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||| |||| || || ||| ||||||||| ||||||||||| ||||    
T  43973515 tttgttctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggacca 43973457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 27393946 - 27394106
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| ||||| |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||||||||| |||  ||| ||||||||||||||||||||| ||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggacca 27394106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 32535330 - 32535492
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaat-----gataattaaagg 107  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     ||||||| ||||    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  108 accgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 32535492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 26274936 - 26275087
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    ||||| ||||||||||||| || || |||||||| ||||||||| ||||||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacac 26275087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 26837725 - 26837884
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| || || ||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||| |||| ||| |||||||||||||| || |||||||||||||||||| ||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggacca 26837884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 22425182 - 22425342
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||| || ||||  ||||| || ||||||||||| ||||||||| ||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggacca 22425342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 30104657 - 30104498
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||| | || |||||||||| ||||| |||| ||| ||||||||| ||||||||||| ||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggacca 30104498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 17464860 - 17465021
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggac-gaaaaatgcaacaaaaatgataattaaaggac 109  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  110 cgttttgttctgttttaaaaagg-cagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||| |||||||| || ||| ||||||||  || ||||||||||||||||| ||||    
T  17464960 cgttttgttctattttaaaagggtcag-accagtttcatgcgtaggccaaaacacgaggacca 17465021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 20840945 - 20841090
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcacca 20841090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 27393822 - 27393677
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| ||| |  | ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||||||||||||| ||||||||||| ||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggacca 27393677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 43973824 - 43973969
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggacca 43973969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 4275748 - 4275893
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||  |||  |||||||| ||||||||||||||||||||| ||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggacca 4275893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 37727314 - 37727459
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||  |||| |||||||| ||||||||||||||||| ||| ||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggacca 37727459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 39555739 - 39555594
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacca 39555594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 22424975 - 22424830
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| | |||||||||||| || |||||||  ||||||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaacca 22424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 25612381 - 25612506
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||| |||| |||     
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    ||||||||| ||||||||||| ||||    
T  25612481 gtgagtaggtcaaaacacgaggacca 25612506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 29801798 - 29801940
Alignment:
Q  25 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtt 123  Q
    |||||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  124 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgag 29801940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 5137365 - 5137510
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||||||||||||  |||||||||||||||||||| ||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggacca 5137510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 31778814 - 31778669
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| ||||||||  ||||||| |||||||||||| ||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggacca 31778669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 32535120 - 32534975
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||||||||| | || | |||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32535120 ctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 32535021  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||| |||| ||| ||||||| ||||||||||||| ||||    
T  32535020 aaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggacca 32534975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 17464652 - 17464507
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||| | ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 17464553  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| | || |||||||||||||||| ||||    
T  17464552 aaaagggcatgaccagtttcgcgaataggccaaaacacgaggacca 17464507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 25853395 - 25853250
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||| ||| ||||||||||||||||||||| ||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggacca 25853250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 41047083 - 41047218
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgtttt 41047181  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    |||| | |||||||||||| |||||||||||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaaca 41047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 29801477 - 29801378
Alignment:
Q  66 ggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    |||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 26274728 - 26274594
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||||  |||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26274629  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    |||| ||||| |||||||| |||||||| ||||||    
T  26274628 aaaagggcaggaccagtttcgtgagtagtccaaaa 26274594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 26837521 - 26837387
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    |||| ||||| |||| ||| |||||||||||||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaa 26837387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 23644849 - 23644994
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||  | |||  | ||||| || ||||||| ||||||||||||||||||||||||| || |||||||||||||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| || || |||| ||| ||||||||||||||||||||| ||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggacca 23644994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 30098147 - 30098292
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||| ||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 30098246  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| ||||||| | ||||||||||| ||||    
T  30098247 aaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggacca 30098292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 24300717 - 24300576
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||| ||||||||| ||||||||||||||||||| ||| |||||||| |||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgaga 167  Q
    |||| | ||| |||||||| |||| || ||||||||||||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacgaga 24300576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 51474737 - 51474863
Alignment:
Q  46 gcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| ||||  |||| |||    
T  51474737 gcgtttttggaggataaaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaattt 51474836  T
Q  145 tgtgagtaggccaaaacacgagaacca 171  Q
     ||||||| ||||||||||| ||||||    
T  51474837 cgtgagtatgccaaaacacgggaacca 51474863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 50116812 - 50116933
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| | || |||||||||||||| ||| |||| ||||  |||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  145 tgtgagtaggccaaaacacgag 166  Q
     ||||||| | |||||||||||    
T  50116912 cgtgagtaagtcaaaacacgag 50116933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 23228414 - 23228529
Alignment:
Q  48 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgt 147  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| ||||||  |||||||| ||||||||| ||||  | || ||| ||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgt 23228512  T
Q  148 gagtaggccaaaacacg 164  Q
    |||||||||||||||||    
T  23228513 gagtaggccaaaacacg 23228529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 32697106 - 32697229
Alignment:
Q  47 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttg 146  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||||| |||   || | ||| |    
T  32697106 cgtttttggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  147 tgagtaggccaaaacacgagaacca 171  Q
    ||||||||| |||||||||| ||||    
T  32697205 tgagtaggctaaaacacgaggacca 32697229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 37220698 - 37220573
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| | ||||||  |||| |||||||||||||  |||  | |  | ||    
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||| ||||| ||||    
T  37220598 gtgagtaggccaaaatacgaggacca 37220573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 18010162 - 18010265
Alignment:
Q  59 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaa 158  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| ||  ||  |||||||||||||||||| ||| |||||| ||| |||||||| | ||    
T  18010162 ataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaa 18010261  T
Q  159 aaca 162  Q
    ||||    
T  18010262 aaca 18010265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 25419285 - 25419166
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataatt-aaaggaccgttttgttctgttttaaaaaggcagaaccagtt 143  Q
    ||||||||||||  |||||||||||  ||||| |||| ||||| ||||| |||||||| ||||||| ||||||||||||||||||| |||||||| | ||    
T  25419285 gcgtttttggag--taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatt 25419188  T
Q  144 ttgtgagtaggccaaaacacga 165  Q
    | ||||||| || |||||||||    
T  25419187 tcgtgagtaagctaaaacacga 25419166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 25420542 - 25420628
Alignment:
Q  43 tctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaa 129  Q
    ||||| |||||| || ||||||||||||||| ||||||||||||||||||||| |||||| ||||||  |||| |||| ||||||||    
T  25420542 tctgcatttttgaaggataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaa 25420628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 23227398 - 23227319
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttt 124  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||  |||||   ||||||||||||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgttt 23227319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 45966076 - 45965954
Alignment:
Q  49 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtg 148  Q
    ||||||||| | |||||||||| ||| ||||||||||||||| ||||||||||  ||||||  ||||||| ||||||||||  |||| |  |  || |||    
T  45966076 tttttggaggagaaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtg 45965977  T
Q  149 agtaggccaaaacacgagaacca 171  Q
    |||| ||||||||||||| ||||    
T  45965976 agtatgccaaaacacgaggacca 45965954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 51473542 - 51473444
Alignment:
Q  73 aggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||| |||| |||||||||||||||||   ||||||  |||||||||||||||||| ||||| |||| ||| |||| ||| |||||||||||| ||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggacca 51473444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 37222040 - 37222100
Alignment:
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  37222040 gttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggacca 37222100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 49407972 - 49407925
Alignment:
Q  10 tagcataggggataggtctaaaactgtcatttctctgcgtttttggag 57  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggag 49407925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 55192293 - 55192222
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaa 82  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||   ||||| || |||||||| ||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaa 55192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 29801578 - 29801532
Alignment:
Q  25 gtctaaaactgtcatttctctgcgtttttggagaataaaatgggggg 71  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29801578 gtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 27200062 - 27200200
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||| ||| |||||||||| ||||||||||||||||||| |||||   ||||| || |||| ||| |||| ||||| ||| |||||| ||  |||||     
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 27200160  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgag 150  Q
    || ||||||  ||| ||| ||||||||||| ||| |||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgag 27200200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 37075864 - 37075781
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 94  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||   |||||  | |||||||| |||| ||||| |||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggagttgaaaataagaggtaggactaaaactgcaaaaaaaa 37075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 32695830 - 32695730
Alignment:
Q  60 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaa 159  Q
    ||||||| |||  ||||| |||| |||||||||||| |||||   |||||  |||||||||||||||||||| || || || ||| || |||||||||||    
T  32695830 taaaatgagggtaaggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaa 32695731  T
Q  160 a 160  Q
    |    
T  32695730 a 32695730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 5e-65; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 12572040 - 12571879
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggt-aggacgaaaaatgcaacaaaaatgataattaaaggac 109  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  110 cgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggacca 12571879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 19176659 - 19176819
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||| ||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggacca 19176819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 13224816 - 13224663
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  13224716 gttttgttctgttttaaaagggcag-accagtttcgtgagtaggccaaaacacga 13224663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 41681306 - 41681150
Alignment:
Q  14 ataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtt 113  Q
    ||||||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  114 ttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 41681150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 9930026 - 9930186
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
     ||||||||| |||||||| ||||| |||||||| ||||||||||||||| ||||| ||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggacca 9930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 33328334 - 33328174
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || |||||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||  | |||||| ||||||||||||||||||||| ||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 33328174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 44831614 - 44831774
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||  |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||||  |||| |||||||| ||||||| ||||||||||||| ||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacca 44831774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 11656630 - 11656471
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccg 111  Q
    |||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  112 ttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| ||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 11656471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 31133385 - 31133236
Alignment:
Q  22 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctg 121  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||| ||    
T  31133385 taggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttttg 31133286  T
Q  122 ttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| ||| | |||||||| ||||||||| ||||||||||| ||||    
T  31133285 ttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggacca 31133236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 33743290 - 33743417
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  113 tttgttctgttttaaaaaggcagaacca 140  Q
    ||||||||||||||||||||||||||||    
T  33743390 tttgttctgttttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 9178005 - 9178164
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||||| || || |||||||||||||||||||||| || |||||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||| | ||||  | |||||| ||||||||||||||||||||| ||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 9178164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 13225023 - 13225168
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 13225168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 4630161 - 4630309
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||      |||||| |||||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||| | |||||||||||||| |||| |||| ||| |||||||| |||||||||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacga 4630309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 19176451 - 19176306
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176352  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  19176351 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggacca 19176306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 9929070 - 9928925
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | ||||  || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 9928971  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||||  ||||||||||| ||||    
T  9928970 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacca 9928925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 44831408 - 44831263
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||| ||| ||||||||||||||||| ||| ||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggacca 44831263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 11656841 - 11656986
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| | | | |||||||| ||||||||||||||||||||| ||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggacca 11656986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 41681518 - 41681663
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||  ||||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41681518 ctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 41681617  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| || || |||||||| |||| |||||||||||||||| ||||    
T  41681618 aaaagggtaggaccagtttcgtgattaggccaaaacacgaggacca 41681663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 31133605 - 31133749
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||| ||||||||||||| ||| |||||  | ||||| || |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 31133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 12572235 - 12572380
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12572334  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||  |||  || ||||| |||||||| |||||||||||| ||||    
T  12572335 aaaagagcatgactagtttcgtgagtagaccaaaacacgaggacca 12572380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 33328524 - 33328669
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||||||||||||| |||||  | |||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||  |||  || ||||| |||||||||| |||||||||| ||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggacca 33328669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 33743082 - 33742938
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| ||| | || ||||| || |||||||||||||||||| |||||||||||||| || |||||||| ||||||||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| ||||||||| ||||||||||| ||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggacca 33742938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 34540934 - 34541077
Alignment:
Q  29 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaa 127  Q
    |||||| |||||||||||||||| |  ||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  128 aaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||  |||| |||||||| ||||||||||||||||||||| ||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 34541077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 4629952 - 4629816
Alignment:
Q  33 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaag 131  Q
    ||||||||||| ||||||| |||||  | ||||| || |||| |||||||||||||| ||||||||||||| || |||||||||||||| |||||||| |    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  132 gcagaaccagttttgtgagtaggccaaaacacgagaa 168  Q
    |||| |||||||| |||| || |||||||||||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaa 4629816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 10918264 - 10918147
Alignment:
Q  49 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtg 148  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||| || ||||||  ||||| ||||||||||  |||||  |||| ||| |||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  149 agtaggccaaaacacgag 166  Q
    |||||  |||||||||||    
T  10918164 agtagatcaaaacacgag 10918147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 11336959 - 11337045
Alignment:
Q  79 aaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||| ||| | |||| ||| ||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacga 11337045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 43958326 - 43958264
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaagga 108  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 8073956 - 8074080
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    ||||||||||||  ||||||||||| |  |||| |||||||||| |||||||||||| |||||   |||||||||||||||||| | ||  | || |||     
T  8073956 gcgtttttggagggtaaaatgggggttttgacgtaaaatgcaac-aaaatgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    |||| |||||||||||||||| ||||    
T  8074055 gtgaataggccaaaacacgaggacca 8074080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 9177793 - 9177724
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaat 95  Q
    ||||||||||||||||||| ||||| |||||  | |||||||| ||| ||| ||||||||||||||||||    
T  9177793 ctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 18805337 - 18805292
Alignment:
Q  12 gcataggggataggtctaaaactgtcatttctctgcgtttttggag 57  Q
    ||||||||| || |||||||||||||||||||||| |||| |||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctctgtgtttctggag 18805292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 4219733 - 4219573
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| | |||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacca 4219573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 33109860 - 33109700
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||||  |||| |||||||| ||||||| ||||||||||||| ||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacca 33109700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 11153516 - 11153676
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacca 11153676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 46193774 - 46193934
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 46193934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 22434547 - 22434705
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  22434646 gttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacca 22434705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 25447611 - 25447759
Alignment:
Q  17 ggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttg 116  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  117 ttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacga 25447759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 25937846 - 25937686
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||| ||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggacca 25937686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 38962189 - 38962348
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38962189 agcatagggg-taggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 38962287  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||| | |||||||| |||| ||| |||||||||||| ||||    
T  38962288 gttttgttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggacca 38962348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 48526371 - 48526212
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| |||||| |||||||  |||||||| ||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaacca 48526212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 15523603 - 15523757
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
     ||||||| |||||||||| ||||| |||||||| |||||||| |||||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacga 15523757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 23494608 - 23494459
Alignment:
Q  22 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctg 121  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  23494608 taggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgttctg 23494509  T
Q  122 ttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  23494508 ttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggacca 23494459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 12234505 - 12234345
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| ||||| |||||||| |||| || ||||||||| ||| ||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggacca 12234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 22170306 - 22170465
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||| |||||||||||||||| | || ||| || |||||| ||||||||||| ||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggacca 22170465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 51020973 - 51020822
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    ||||||||||||||||||| ||||| |||||||| |||| |  |||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaaca 51020822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 45082606 - 45082454
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    |||||||||| |||||||| |||| |||||| || |||||||| |||||||||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacga 45082454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 2118665 - 2118818
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    |||||||| |||||||||| |  || ||||||||  |||| ||||||||||||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacga 2118818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 12503805 - 12503913
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  111 gttttgttc 119  Q
    |||||||||    
T  12503905 gttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 54995437 - 54995596
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||| | ||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| || |||||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaac-aaaatgatacttgaaggacc 54995535  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||| |||||||| ||||  | |||||| ||||||||||||||||||||| ||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 54995596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 46193568 - 46193421
Alignment:
Q  25 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtt 123  Q
    ||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  124 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 46193421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 22434340 - 22434195
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| ||||||| ||||||||||||| ||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggacca 22434195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 25447408 - 25447263
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| ||||||||  |||||||||||||||||||| ||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggacca 25447263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 45082808 - 45082953
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| ||||||| ||||||||||||| ||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggacca 45082953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 15523395 - 15523251
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 15523251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 11153307 - 11153162
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||||||| ||| |  | ||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||| ||||||||||||||||||||||||| ||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggacca 11153162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 12234713 - 12234858
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||||| ||| ||| |  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12234812  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  | |||||| ||||||||||||||||||||| ||||    
T  12234813 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 12234858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 48526565 - 48526710
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  |||||||| |||||||| |||||||||||| ||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggacca 48526710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 23494872 - 23494972
Alignment:
Q  71 gtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacc 170  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  171 a 171  Q
    |    
T  23494972 a 23494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 4219943 - 4220088
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||| ||||||||||||||||| ||  | ||||| || ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||  |||| | |||||| ||||||||||||||||||||| ||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggacca 4220088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 18751760 - 18751615
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||| ||||| ||||||||| |||||  | ||||| || ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgtttt 18751661  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||  ||||||||| |||||||||||||||||||| ||||    
T  18751660 aaaagggcatgaccagttttatgagtaggccaaaacacgaggacca 18751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 20470895 - 20471040
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| || |  |||||||| || |||||||||||||||||| ||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggacca 20471040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 44892552 - 44892677
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||| || ||| ||||||||||||||||||| |||||||||| |||     
T  44892552 gcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    ||||||||| ||||||||||| ||||    
T  44892652 gtgagtaggtcaaaacacgaggacca 44892677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 54995230 - 54995085
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 54995131  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| || || || ||||| ||||||||||||| ||||||| ||||    
T  54995130 aaaagggtaggactagtttcgtgagtaggccaatacacgaggacca 54995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 51021180 - 51021319
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||| || ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgtttt 51021278  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||| ||||| |||| ||| |||||||||||||||||||||    
T  51021279 aaaagggcaggaccaatttcgtgagtaggccaaaacacgag 51021319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 12503597 - 12503457
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||| ||| | | |||||| ||||||| | |||||||||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgag 12503457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 25938056 - 25938192
Alignment:
Q  28 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||| ||||||| || |||| |||||  | ||||| || |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  25938056 taaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtttta 25938155  T
Q  127 aaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    ||| ||||| |||| ||| ||||||||||||||||||    
T  25938156 aaagggcaggaccaatttcgtgagtaggccaaaacac 25938192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 43243685 - 43243804
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||| ||| ||  |||||||||||||||||| ||||  |||| |||     
T  43243685 gcgtttttggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  146 gtgagtaggccaaaacacgag 166  Q
    |||||||||||||||||||||    
T  43243784 gtgagtaggccaaaacacgag 43243804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 48713749 - 48713872
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||  |||  |||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  145 tgtgagtaggccaaaacacgagaa 168  Q
      ||||||||| ||||||||||||    
T  48713849 catgagtaggctaaaacacgagaa 48713872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 33109883 - 33109993
Alignment:
Q  61 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||| ||| ||||| |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  161 cacgagaacca 171  Q
    || ||| ||||    
T  33109983 catgaggacca 33109993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 2118454 - 2118317
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||  |||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||    
T  2118454 ctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgtttt 2118355  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacac 163  Q
    |||| ||||| |||| ||| ||||||||||||||||||    
T  2118354 aaaagggcaggaccaatttcgtgagtaggccaaaacac 2118317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 20958264 - 20958383
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||| ||||||   ||||||||||||||||| ||||| |||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  145 tgtgagtaggccaaaacacgag 166  Q
     ||||||||||||||| |||||    
T  20958362 cgtgagtaggccaaaatacgag 20958383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 43281198 - 43281314
Alignment:
Q  49 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtg 148  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||| ||  |||||||||||||||||| ||||  |||| ||| |||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  149 agtaggccaaaacacgag 166  Q
    ||||||||||||||||||    
T  43281297 agtaggccaaaacacgag 43281314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 35363028 - 35363125
Alignment:
Q  70 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaag-gcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||| | |||| ||||| ||||||||||||| |||||||||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgag 35363125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 48293735 - 48293610
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||| || ||| | || |||     
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    ||||||| ||||||||||||| ||||    
T  48293635 gtgagtaagccaaaacacgaggacca 48293610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 16691072 - 16690960
Alignment:
Q  51 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgag 150  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||   ||||||| ||||||||| |||||| |||| ||| |||||    
T  16691072 tttggaggataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgag 16690973  T
Q  151 taggccaaaacac 163  Q
    |||  ||||||||    
T  16690972 tagatcaaaacac 16690960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 18763951 - 18764049
Alignment:
Q  73 aggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||||||||||| || || |||| |||||||||||||||||| | ||  |||||||| ||||||||||||||||||||| ||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggacca 18764049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 43242411 - 43242325
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaagg 132  Q
    |||||||||||  ||||||| || ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  43242411 gcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaaagg 43242325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 16691481 - 16691592
Alignment:
Q  51 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgag 150  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||||  ||||||| || |||||| |||||| |||| ||| |||||    
T  16691481 tttggaggataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatg-tttaaagaggcaggaccattttcgtgag 16691579  T
Q  151 taggccaaaacac 163  Q
    |||| ||||||||    
T  16691580 taggtcaaaacac 16691592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 48294946 - 48295066
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacg-aaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| || |||  ||||||| ||||||||| |||||  |||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  145 tgtgagtaggccaaaacacga 165  Q
     ||||||||  ||||||||||    
T  48295046 cgtgagtagatcaaaacacga 48295066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 44890658 - 44890541
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||| ||| ||||||||||||||| || |||||||||||||||||  ||||||||||||   |||||||||||||||||| ||||  |||| |||     
T  44890658 gcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  146 gtgagtaggccaaaacac 163  Q
    |||| |||| ||||||||    
T  44890558 gtgaataggtcaaaacac 44890541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 18751971 - 18752038
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacg 78  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggacg 18752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 20957327 - 20957205
Alignment:
Q  49 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtg 148  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||  ||||||| ||||||||||  | |  |||| ||| |||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  149 agtaggccaaaacacgagaacca 171  Q
    |||| |||||||| |||| ||||    
T  20957227 agtaagccaaaactcgaggacca 20957205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 48708431 - 48708319
Alignment:
Q  51 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgag 150  Q
    ||||||| |||||||| | |||||||  | |||||||||||||||||||||| |||||| |||||||| |||||||||| ||||| | || ||| |||      
T  48708431 tttggaggataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggt 48708332  T
Q  151 taggccaaaacac 163  Q
    |||||||||||||    
T  48708331 taggccaaaacac 48708319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 44220781 - 44220861
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttta 126  Q
    |||||||||||| |||||||  ||||||| |||||||||| |||||||||||||| | ||||||  |||||||||||||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 17504149 - 17504061
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgata 99  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||   ||||| || |||||||| |||| ||||| ||| ||||||    
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgata 17504061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 10258306 - 10258416
Alignment:
Q  61 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||| ||  ||  ||||  |||||||||||| ||||| |||| |||  ||||||||||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  161 cacgagaacca 171  Q
    |||||| ||||    
T  10258406 cacgaggacca 10258416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 16318251 - 16318305
Alignment:
Q  117 ttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||| ||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggacca 16318305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgttt 51  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgttt 51  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 55189636 - 55189549
Alignment:
Q  79 aaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||||| | |||||||||||||| || |||  ||||||||| |||||||| |||| ||||| |||| ||| |||| |||||||||||    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgag 55189549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 30597925 - 30598049
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||   |||||| |||| |||||| |||| |||||||||||| |||||| | ||||  ||||||||  ||| ||| || |||||||| ||      
T  30597925 gcgtttttggatgttaaaataggggttaggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttcgatttaaaagagacagaaccaattcc 30598023  T
Q  146 gtgagtaggccaaaacacgagaacca 171  Q
    |||||| || ||||||||||| ||||    
T  30598024 gtgagttggtcaaaacacgaggacca 30598049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctc 44  Q
    |||||||||| |||||||||||||||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 1841 - 1683
Alignment:
Q  13 cataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||| ||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggacca 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 2051 - 2196
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| || |||||||||||||||||| ||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 134042 - 134202
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||| |||||| ||||  || ||||| ||||||||||||||||||||| ||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggacca 134202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 117; Significance: 1e-59; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 64478 - 64318
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| | ||| | |||||| ||||||| | ||||||||||| ||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggacca 64318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 64735 - 64834
Alignment:
Q  72 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||||| ||||||||||||| ||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 205738 - 205886
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||   ||||| ||  ||||||| |||| ||||| ||| |||||| || | ||||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    |||||||||  ||| ||| |||||| |||| ||| |||||| || |||||    
T  205837 gttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaa 205886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 10797 - 10642
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||||||||||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgag 10642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 11007 - 11152
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||  |||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  11007 ctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 11106  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    |||| ||||| |||||||| || |||||||||||||||||| ||||    
T  11107 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 11152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 42528 - 42682
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    ||||||||||||||||||| ||||||| ||||||  ||||||| ||||||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgag 42682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 42345 - 42187
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggac 109  Q
    |||||||||| |||||||||||||||||||||||||||||| || ||  | ||||| || |||| ||| |||||||||||||||||||||||| || |||    
T  42345 agcatagggg-taggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgac 42247  T
Q  110 cgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 169  Q
    |||||||||||||||||||| ||||| | |||||| |||| ||| |||||||||||||||    
T  42246 cgttttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaac 42187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 928 - 775
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||| ||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaac-aaaatgataattgaaggacc 830  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 165  Q
    ||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacga 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 1110 - 1265
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggac 109  Q
    |||||||||| | |||||||||||| ||||| ||||||||| ||| |  | ||||| || |||||||||||| |||||||||||||||||||| ||||||    
T  1110 agcatagggg-tgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggac 1208  T
Q  110 cgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||    
T  1209 cgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgag 1265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 10242 - 10401
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  111 gttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||||||||| || |  |||||||| |||||||| |||||||||||| ||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggacca 10401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 162
Target Start/End: Complemental strand, 18996 - 18860
Alignment:
Q  25 gtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttt 124  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  18996 gtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgttatgttt 18898  T
Q  125 taaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    ||||| ||||  |||||||| |||||||||||||||||    
T  18897 taaaagggcaagaccagtttcgtgagtaggccaaaaca 18860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 19069 - 19150
Alignment:
Q  90 aaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 171  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggacca 19150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 16672 - 16564
Alignment:
Q  11 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  111 gttttgttc 119  Q
    |||||||||    
T  16572 gttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 16880 - 17020
Alignment:
Q  27 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 125  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  126 aaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||| ||| | | |||||| ||||||| | |||||||||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgag 17020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 28662 - 28766
Alignment:
Q  61 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 160  Q
    ||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||  |||||||| || ||||||||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  161 cacga 165  Q
    |||||    
T  28762 cacga 28766  T

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Target: scaffold1585 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 709 - 588
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttt 144  Q
    ||||||||||||| || ||||||| |||  |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||  | || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  145 tgtgagtaggccaaaacacgag 166  Q
     |||||||||||||||||||||    
T  609 cgtgagtaggccaaaacacgag 588  T

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Target: scaffold0168 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 7691 - 7775
Alignment:
Q  45 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaa 129  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaa 7775  T

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Target: scaffold0057 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 61862 - 61982
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||||||| | ||||||||||||||||||||||||  ||||||||||||| || || ||   ||||||||| |||||||| || || |||| |||     
T  61862 gcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  146 gtgagtaggccaaaacacgag 166  Q
    |||||||| ||||||||||||    
T  61962 gtgagtagaccaaaacacgag 61982  T

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Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 61102 - 61049
Alignment:
Q  113 tttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 166  Q
    |||||||| |||||||| ||||| | || ||| |||||||||||||||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgag 61049  T

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Target: scaffold1696 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 589 - 471
Alignment:
Q  46 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagtttt 145  Q
    |||||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||  || |||| ||||||||||   ||  |||| |||     
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  146 gtgagtaggccaaaacacga 165  Q
    ||||||||||||||||||||    
T  490 gtgagtaggccaaaacacga 471  T

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Target: scaffold0076 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 8451 - 8529
Alignment:
Q  84 tgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 162  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||| || || |||||||| || ||||| ||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaaca 8529  T

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