View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15655_low_6 (Length: 614)

Name: NF15655_low_6
Description: NF15655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15655_low_6
NF15655_low_6
[»] chr5 (13 HSPs)
chr5 (17-197)||(35328810-35328991)
chr5 (17-149)||(35329255-35329388)
chr5 (55-198)||(42882990-42883132)
chr5 (55-197)||(38925437-38925580)
chr5 (55-187)||(22545732-22545862)
chr5 (112-197)||(21112711-21112796)
chr5 (62-155)||(32727016-32727109)
chr5 (98-156)||(19835223-19835281)
chr5 (119-197)||(22362557-22362635)
chr5 (112-188)||(27032654-27032730)
chr5 (113-197)||(20667560-20667644)
chr5 (153-197)||(28727663-28727707)
chr5 (143-197)||(42920364-42920418)
[»] scaffold0283 (2 HSPs)
scaffold0283 (17-174)||(13602-13760)
scaffold0283 (107-171)||(13518-13582)
[»] chr8 (19 HSPs)
chr8 (17-174)||(44967468-44967626)
chr8 (55-203)||(8223724-8223871)
chr8 (58-197)||(43974731-43974870)
chr8 (55-188)||(13586233-13586366)
chr8 (55-158)||(22932072-22932175)
chr8 (55-173)||(43974612-43974730)
chr8 (55-197)||(7964870-7965009)
chr8 (98-180)||(44508141-44508223)
chr8 (107-171)||(44967384-44967448)
chr8 (133-197)||(29634728-29634792)
chr8 (141-197)||(16047108-16047164)
chr8 (141-197)||(23120522-23120578)
chr8 (141-180)||(21349415-21349454)
chr8 (139-197)||(508262-508320)
chr8 (139-197)||(37257760-37257818)
chr8 (112-173)||(22643689-22643750)
chr8 (140-197)||(45537326-45537383)
chr8 (141-177)||(8213512-8213548)
chr8 (112-197)||(43649515-43649596)
[»] chr3 (18 HSPs)
chr3 (274-388)||(4822423-4822536)
chr3 (197-262)||(4822313-4822378)
chr3 (112-197)||(46124028-46124113)
chr3 (112-203)||(9767905-9767996)
chr3 (55-197)||(7566964-7567106)
chr3 (133-198)||(41935236-41935301)
chr3 (136-202)||(6079876-6079942)
chr3 (136-197)||(15212737-15212798)
chr3 (136-197)||(15251956-15252017)
chr3 (140-201)||(21972641-21972702)
chr3 (140-201)||(21995072-21995133)
chr3 (133-197)||(11028072-11028135)
chr3 (141-197)||(53157279-53157335)
chr3 (139-197)||(14163411-14163469)
chr3 (136-201)||(22155372-22155437)
chr3 (141-197)||(18740869-18740925)
chr3 (134-187)||(35370716-35370769)
chr3 (141-197)||(51425364-51425420)
[»] chr6 (31 HSPs)
chr6 (29-197)||(21393315-21393484)
chr6 (55-203)||(15907010-15907157)
chr6 (55-199)||(21683169-21683312)
chr6 (55-198)||(20881915-20882057)
chr6 (55-197)||(18715273-18715414)
chr6 (29-197)||(18801363-18801532)
chr6 (55-197)||(14463491-14463632)
chr6 (86-187)||(7456852-7456953)
chr6 (17-187)||(31569319-31569497)
chr6 (17-197)||(23160649-23160837)
chr6 (112-197)||(19382970-19383055)
chr6 (86-197)||(31877160-31877271)
chr6 (55-179)||(20025689-20025814)
chr6 (113-197)||(14603949-14604033)
chr6 (133-200)||(19214778-19214845)
chr6 (112-194)||(18175914-18175996)
chr6 (133-197)||(17102628-17102692)
chr6 (112-194)||(18223805-18223887)
chr6 (140-197)||(17724581-17724638)
chr6 (136-197)||(32616898-32616959)
chr6 (133-197)||(23094602-23094666)
chr6 (139-198)||(2666144-2666203)
chr6 (139-197)||(8848081-8848138)
chr6 (136-197)||(8909963-8910024)
chr6 (134-187)||(10929423-10929476)
chr6 (134-187)||(16308045-16308098)
chr6 (141-197)||(19002769-19002825)
chr6 (136-195)||(13548340-13548399)
chr6 (133-196)||(14603728-14603791)
chr6 (141-197)||(18691735-18691791)
chr6 (133-173)||(22291695-22291735)
[»] chr1 (15 HSPs)
chr1 (45-203)||(44201577-44201736)
chr1 (55-203)||(15723207-15723355)
chr1 (55-197)||(42958614-42958757)
chr1 (45-197)||(19193715-19193865)
chr1 (74-197)||(46351890-46352014)
chr1 (62-164)||(46757973-46758076)
chr1 (109-199)||(45652505-45652595)
chr1 (17-158)||(7487261-7487407)
chr1 (133-195)||(2248044-2248106)
chr1 (55-120)||(18504812-18504877)
chr1 (133-180)||(25613993-25614040)
chr1 (138-187)||(29696345-29696394)
chr1 (139-198)||(41476073-41476132)
chr1 (139-197)||(46123008-46123066)
chr1 (112-164)||(22045690-22045742)
[»] chr4 (12 HSPs)
chr4 (55-197)||(18811244-18811385)
chr4 (59-197)||(43593764-43593904)
chr4 (55-197)||(50377326-50377468)
chr4 (55-197)||(19112031-19112177)
chr4 (55-174)||(52374279-52374397)
chr4 (108-199)||(1701210-1701301)
chr4 (87-199)||(16612220-16612332)
chr4 (123-197)||(13757135-13757209)
chr4 (59-148)||(43593548-43593642)
chr4 (112-171)||(14464133-14464192)
chr4 (134-183)||(9296842-9296891)
chr4 (139-197)||(35577352-35577410)
[»] chr2 (10 HSPs)
chr2 (55-203)||(24079426-24079573)
chr2 (55-197)||(25417080-25417222)
chr2 (55-155)||(5783434-5783534)
chr2 (55-175)||(44481332-44481451)
chr2 (133-201)||(31898579-31898647)
chr2 (133-200)||(2707129-2707196)
chr2 (133-197)||(24863912-24863976)
chr2 (112-199)||(29406664-29406750)
chr2 (137-197)||(24049087-24049147)
chr2 (139-187)||(18817528-18817576)
[»] scaffold0214 (2 HSPs)
scaffold0214 (55-199)||(21705-21849)
scaffold0214 (55-197)||(29145-29291)
[»] scaffold0557 (1 HSPs)
scaffold0557 (55-198)||(6434-6576)
[»] chr7 (8 HSPs)
chr7 (55-197)||(18535662-18535804)
chr7 (55-181)||(3568526-3568653)
chr7 (17-197)||(39702998-39703183)
chr7 (55-158)||(12314855-12314957)
chr7 (55-197)||(13796505-13796647)
chr7 (55-177)||(1966329-1966451)
chr7 (123-197)||(1723429-1723503)
chr7 (139-197)||(10206659-10206717)
[»] scaffold0590 (1 HSPs)
scaffold0590 (55-177)||(8958-9080)
[»] scaffold0159 (1 HSPs)
scaffold0159 (55-155)||(36897-36997)
[»] scaffold0041 (1 HSPs)
scaffold0041 (55-203)||(32196-32342)
[»] scaffold0760 (1 HSPs)
scaffold0760 (29-177)||(132-280)
[»] scaffold0054 (2 HSPs)
scaffold0054 (55-197)||(49671-49814)
scaffold0054 (55-197)||(28715-28858)
[»] scaffold0077 (2 HSPs)
scaffold0077 (133-199)||(52532-52598)
scaffold0077 (133-163)||(40361-40391)
[»] scaffold0039 (2 HSPs)
scaffold0039 (133-199)||(102230-102296)
scaffold0039 (137-197)||(84236-84296)
[»] scaffold0337 (2 HSPs)
scaffold0337 (62-155)||(152-245)
scaffold0337 (136-202)||(786-852)
[»] scaffold0072 (1 HSPs)
scaffold0072 (139-198)||(46283-46342)
[»] scaffold0281 (1 HSPs)
scaffold0281 (133-194)||(4581-4642)
[»] scaffold0553 (1 HSPs)
scaffold0553 (133-197)||(6549-6613)
[»] scaffold0003 (1 HSPs)
scaffold0003 (133-190)||(163142-163199)
[»] scaffold0320 (1 HSPs)
scaffold0320 (141-197)||(14208-14264)
[»] scaffold0017 (1 HSPs)
scaffold0017 (133-197)||(38602-38666)
[»] scaffold0220 (1 HSPs)
scaffold0220 (133-199)||(28495-28561)
[»] scaffold0422 (1 HSPs)
scaffold0422 (142-187)||(10386-10431)
[»] scaffold0179 (1 HSPs)
scaffold0179 (141-198)||(28444-28501)


Alignment Details
Target: chr5 (Bit Score: 138; Significance: 8e-72; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 35328991 - 35328810
Alignment:
Q  17 acatatcttacattttttattaagctctatcattctt-caattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaa 115  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35328991 acatatcttacattttttattaagcttgatcattctttcaattctaataattttctccaagatatatcagaaaaaactaacccaaccttgatgttgaaaa 35328892  T
Q  116 acatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| || |||||||||| ||||||||    
T  35328891 acatattgtttatgagttacatgtgttagcgcagtagaaagagcggacagacgggcacgtgaatgcccgtctggacgctagt 35328810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 35329388 - 35329255
Alignment:
Q  17 acatatcttacattttttattaagctctatcattctt-caattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaa 115  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35329388 acatatcttacattttttattaagcttgatcattctttcaattctaataattttctccaagatatatcagaaaaaactaacccaaccttgatgttgaaaa 35329289  T
Q  116 acatattgtttatgagttacatgcgttagcgcag 149  Q
    ||||||||||||||||||||||||||||||||||    
T  35329288 acatattgtttatgagttacatgcgttagcgcag 35329255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 55 - 198
Target Start/End: Original strand, 42882990 - 42883132
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    ||||||||||||||||| |||||||||| |  ||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  42882990 aattctaataattttcttcaagatatatcaagaaaaactaaac-aacattgatgttaaaaaacatattgtttatgagttacatgcgttagcgcagtaaaa 42883088  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagtt 198  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||    
T  42883089 agagcggacagacgggcacgggagtgcccgtctggacgctagtt 42883132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 38925580 - 38925437
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaacctt-gatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtaga 153  Q
    |||||||||||||||||||||||||||| |  ||||| ||| ||||| || |||||||||||||||| ||||||| | ||||||| ||||||| ||||||    
T  38925580 aattctaataattttctccaagatatatcaagaaaaaataaaccaacttttgatgttgaaaaacatactgtttataaattacatgtgttagcgtagtaga 38925481  T
Q  154 aagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||    
T  38925480 aagagcggacagacgggcacgggagtgcccgtctggacgctagt 38925437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 55 - 187
Target Start/End: Original strand, 22545732 - 22545862
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||| ||||| ||||||||| |  ||||||||| | ||| ||||||||||||| |||  ||||||||||||||||||||||||||| || |     
T  22545732 aattctaataatattctctaagatatatcaagaaaaactaaac-aacattgatgttgaaaa-cattctgtttatgagttacatgcgttagcgcaataaat 22545829  T
Q  155 agagaggacacacgggcacgggagtgcccgtct 187  Q
    |||| ||||| ||||||||||||||||||||||    
T  22545830 agagcggacagacgggcacgggagtgcccgtct 22545862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 21112796 - 21112711
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  21112796 aaaaacatattgtttataagttatatacgttatcgcagtagaaagagcggacagacgggcacgggagtgcccgtctggacgctagt 21112711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 32727016 - 32727109
Alignment:
Q  62 ataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaa 155  Q
    |||||||| | |||||||||| |  ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  32727016 ataattttattcaagatatatcaataaaaactaaaccaacattgatgttgaaaaacatactgtttatgagttacatgcgttggcgtagtagaaa 32727109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 19835223 - 19835281
Alignment:
Q  98 caaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaag 156  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19835223 caacattgatgttgaaaaacatactgtttatgagttacatgcgttagcgcagtagaaag 19835281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 22362635 - 22362557
Alignment:
Q  119 tattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||| ||| |||  ||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||    
T  22362635 tattgtttataagtaacacacgttagcgcagtagaaaaagcggacagacgggcacgggagtgcccgtctggacgctagt 22362557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 27032654 - 27032730
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctg 188  Q
    ||||||||| |||| ||| ||| ||  |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  27032654 aaaaacataatgttcatgcgttgcacacgttagcgcagtagaaagagcggacagacgggcacgggagtgcccgtctg 27032730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 20667644 - 20667560
Alignment:
Q  113 aaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| || || ||||| |||||||||||||||||| | |  ||||| |||||||||||||||||| |||||||||||||    
T  20667644 aaaaaatattattaatcagttatatgcgttagcgcagtagataaaacggacaaacgggcacgggagtgcccatctgaacgctagt 20667560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 28727707 - 28727663
Alignment:
Q  153 aaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||| ||||| | ||||||||||||||||||||||||||||||    
T  28727707 aaagagcggacagatgggcacgggagtgcccgtctgaacgctagt 28727663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 42920418 - 42920364
Alignment:
Q  143 agcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||||||| ||||| ||||||| | || |||||||||| ||||||||    
T  42920418 agcgcagtagaaagagcggacagacgggcatgagaatgcccgtctggacgctagt 42920364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 127; Significance: 3e-65; HSPs: 2)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 13760 - 13602
Alignment:
Q  17 acatatcttacattttttattaagctctatcattctt-caattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaa 115  Q
    |||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13760 acatatcttatattttttattaagcttgatcattctttcaattctaataattttctccaagatatatcagaaaaaactaacccaaccttgatgttgaaaa 13661  T
Q  116 acatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacg 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  13660 acatattgtttatgagttacatgcgttagcgcagtagaaagagcggacagacgggcacg 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 13582 - 13518
Alignment:
Q  107 tgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggc 171  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  13582 tgttgaaaaacatattgtttatgagttacatgcgttagcgcagtggaaagagcggacagacgggc 13518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 3e-65; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 44967626 - 44967468
Alignment:
Q  17 acatatcttacattttttattaagctctatcattctt-caattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaa 115  Q
    |||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44967626 acatatcttatattttttattaagcttgatcattctttcaattctaataattttctccaagatatatcagaaaaaactaacccaaccttgatgttgaaaa 44967527  T
Q  116 acatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacg 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  44967526 acatattgtttatgagttacatgcgttagcgcagtagaaagagcggacagacgggcacg 44967468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 55 - 203
Target Start/End: Complemental strand, 8223871 - 8223724
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    ||||||||||||||||| |||||||||| |  ||||||||| | ||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  8223871 aattctaataattttcttcaagatatatcaagaaaaactaaac-aacattgatgttaaaaaacatactgtttatgagttacatgcgttagtgcagtagaa 8223773  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagtttatat 203  Q
    |||| ||||| | ||||||||||||||||||||| |||||||| |||||    
T  8223772 agagcggacagaagggcacgggagtgcccgtctggacgctagtatatat 8223724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 43974731 - 43974870
Alignment:
Q  58 tctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaaga 157  Q
    |||||||||| |||||||||||||| |  |||||||||   ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43974731 tctaataattctctccaagatatatcaagaaaaactaaatgaaaattgatgttgaaaaacatattgtttatgagttacatgcgttagcgcaatagaaaga 43974830  T
Q  158 gaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    | ||||| |||| |||||||||||||||||| ||||||||    
T  43974831 gcggacaaacggacacgggagtgcccgtctggacgctagt 43974870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 13586233 - 13586366
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  |||||||||   ||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  13586233 aattctaataattttctccaagatatatcaagaaaaactaaataaacattgatgttgaaaaacataatgtttatgagttacatgcgttcgtgcagtagaa 13586332  T
Q  155 agagaggacacacgggcacgggagtgcccgtctg 188  Q
    ||||  |||| |||||||||||||||||||||||    
T  13586333 agagcagacagacgggcacgggagtgcccgtctg 13586366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 22932175 - 22932072
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  22932175 aattctaataattttctccaagatatatcaagaaaaactaaacaaacattgatgttgaaaaatataatgtttatgagttacatgcgttagcgcagtagaa 22932076  T
Q  155 agag 158  Q
    ||||    
T  22932075 agag 22932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 43974612 - 43974730
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    ||||||||||||| |||||||||||||| |  ||||||||| | ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43974612 aattctaataattctctccaagatatatcaagaaaaactaaacaaaaattgatgttgaaaaacatattgtttatgagttacatgcgctagcgcagtagaa 43974711  T
Q  155 agagaggacacacgggcac 173  Q
    |||| |||||  |||||||    
T  43974712 agagcggacaggcgggcac 43974730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 7964870 - 7965009
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| |||||||||||||||||| ||||||| |||| ||||||| || ||||| |||    
T  7964870 aattctaataattttctccaagatatatcaagaaaaactaaac-aacattgatgttgaaaaacatactgtttataagttgcatgcgtaagtgcagtggaa 7964968  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| |||| |||    ||||||||||| ||||||||    
T  7964969 agagcggacagacggacac--tcgtgcccgtctggacgctagt 7965009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 44508223 - 44508141
Alignment:
Q  98 caaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtg 180  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||    
T  44508223 caacattgatgttcaaaaacatattgtttgtgagttacatgcgttagcgcagtagaaagagcggacagacgggtacggaagtg 44508141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 44967448 - 44967384
Alignment:
Q  107 tgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggc 171  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  44967448 tgttgaaaaacatattgtttatgagttacatgcgttagcgcagtggaaagagcggacagacgggc 44967384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 29634728 - 29634792
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||| ||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  29634728 tacatgtgttagcgcagtagtaagagcagacaaacgggcacgggagtgcccgtctgaacgctagt 29634792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 16047108 - 16047164
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||||||||| ||||| || ||||||| |||||||||||| ||||||||    
T  16047108 ttagcgcagtagaaagagcggacagacaggcacggaagtgcccgtctggacgctagt 16047164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 23120578 - 23120522
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||| || ||||| | ||||||||||||| ||||||| ||||||||    
T  23120578 ttagcgcagtagaaaaagcggacagatgggcacgggagtgtccgtctggacgctagt 23120522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 21349454 - 21349415
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtg 180  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  21349454 ttagcgcagtagaaagagcggacagacgggcacgggagtg 21349415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 508320 - 508262
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||| |||  | ||||| ||||||||| ||||||||||||| ||||||||    
T  508320 cgttagcgcagtaaaaaatgcggacagacgggcacgagagtgcccgtctggacgctagt 508262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 37257760 - 37257818
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||||| ||  |||| |||| ||||| | |||||||||||||||||||    
T  37257760 cgttagcgcagtagaaaaagcagacagacggacacggaaatgcccgtctgaacgctagt 37257818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 22643750 - 22643689
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcac 173  Q
    ||||||||| |||| ||| ||| ||  |||||||||||||||||||| ||||| ||||||||    
T  22643750 aaaaacataatgttcatgcgttgcacacgttagcgcagtagaaagagcggacagacgggcac 22643689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 45537326 - 45537383
Alignment:
Q  140 gttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||| ||||||| || | ||| |||||||| |||||||||||||| ||||||||    
T  45537326 gttagcgcggtagaaaaagcgaacagacgggcacaggagtgcccgtctggacgctagt 45537383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 8213512 - 8213548
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacggga 177  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  8213512 ttagcgcagtagaaagagcggacagacgggcacggga 8213548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 43649596 - 43649515
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| ||||||||||| ||||| || ||||| |||||||||||||| | | | ||||||||    ||||||||||| ||||||||    
T  43649596 aaaaatatattgtttataagttatatacgttatcgcagtagaaagagcgaatagacgggcac----gtgcccgtctggacgctagt 43649515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 6e-51; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 4822423 - 4822536
Alignment:
Q  274 ttgatatattgatataaattgatattttcaatttaaaaatgagtatccctacccataaaccaaaataaatgagtatccaccattattagcaaaataaaga 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4822423 ttgatatattgatataaattgatattttcaatttaaaaatgagtatccctacccataaaccaaaataaataagtatccaccattattagcaaaataaaga 4822522  T
Q  374 ttacggttagtttgt 388  Q
     ||||||||||||||    
T  4822523 -tacggttagtttgt 4822536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 4822313 - 4822378
Alignment:
Q  197 tttatattaatattaatatatcatttgaacaaaacatgatatgaaaatggtgaagatattcctctc 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4822313 tttatattaatattaatatatcatttgaacaaaacatgatatgaaaatggtgaagatattcctctc 4822378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 46124113 - 46124028
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||    
T  46124113 aaaaacatattgtttatgagttatatacgttagcgcagtagaaaaagcggacagacgggcacgggagtgcccgtctgaacgctagt 46124028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 9767905 - 9767996
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtttatat 203  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||    
T  9767905 aaaaacgtattgtttatgagttatatacgttagcgcagtagaaagagcggacagacgggcacgggagtgcccgtctggacgctagttaatat 9767996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 7567106 - 7566964
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    ||||||||||||||| || ||||||||| |  ||||||||| | ||| |||||||||||||||||| |||| |||| || ||||||||||||||| ||||    
T  7567106 aattctaataattttttctaagatatatcaagaaaaactaaacaaacattgatgttgaaaaacataatgttcatgatttgcatgcgttagcgcagcagaa 7567007  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    || | ||| | ||||| |||||||||| |||||| ||||||||    
T  7567006 agggcggatagacgggtacgggagtgctcgtctggacgctagt 7566964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 41935236 - 41935301
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtt 198  Q
    |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  41935236 tacatgtgttaacgcagtagaaagagcggacagacgggcacgggagtgcccgtctggacgctagtt 41935301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 6079876 - 6079942
Alignment:
Q  136 atgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtttata 202  Q
    |||||||||||||||||||| || ||||| |||||||||| |||||| |||||||||||||| ||||    
T  6079876 atgcgttagcgcagtagaaaaagcggacagacgggcacggaagtgccggtctgaacgctagtatata 6079942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 15212798 - 15212737
Alignment:
Q  136 atgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||| |||| ||||||||    
T  15212798 atgcgttagcgcagtagaaaaagcggacagacgggcacgggagtgcccatctggacgctagt 15212737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 15252017 - 15251956
Alignment:
Q  136 atgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||| |||| ||||||||    
T  15252017 atgcgttagcgcagtagaaaaagcggacagacgggcacgggagtgcccatctggacgctagt 15251956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 21972702 - 21972641
Alignment:
Q  140 gttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtttat 201  Q
    ||||||| |||||||| || ||||| ||||||||||||||||||||||| ||||||||||||    
T  21972702 gttagcgtagtagaaaaagcggacaaacgggcacgggagtgcccgtctggacgctagtttat 21972641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 21995133 - 21995072
Alignment:
Q  140 gttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtttat 201  Q
    ||||||| |||||||| || ||||| ||||||||||||||||||||||| ||||||||||||    
T  21995133 gttagcgtagtagaaaaagcggacaaacgggcacgggagtgcccgtctggacgctagtttat 21995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 11028135 - 11028072
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||| ||||||| ||||||||    
T  11028135 tacatgcgttagcgcagtagaaaaagcggacagacgggcacgggagtg-ccgtctggacgctagt 11028072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 53157335 - 53157279
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||||    
T  53157335 ttagcgcagtagaaagagcggacagacgggcacgagagtgcccgtctggacgctagt 53157279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 14163469 - 14163411
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| ||||||| |||||| ||||| ||||||||| ||||||||||||||||||||||    
T  14163469 cgttaacgcagtaaaaagagcggacagacgggcacgagagtgcccgtctgaacgctagt 14163411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 22155437 - 22155372
Alignment:
Q  136 atgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtttat 201  Q
    ||||||||||| |||||||| |  ||||| ||||||||||||||| ||||||| ||||||||||||    
T  22155437 atgcgttagcgtagtagaaaaaacggacagacgggcacgggagtgtccgtctggacgctagtttat 22155372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 18740869 - 18740925
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||| ||||||||| ||||| ||| |||||| |||||||||||| ||||||||    
T  18740869 ttagcgcattagaaagagcggacagacgcgcacggaagtgcccgtctggacgctagt 18740925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 35370716 - 35370769
Alignment:
Q  134 acatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtct 187  Q
    |||||||||||||||||| |||||| ||||| | ||||| | ||||||||||||    
T  35370716 acatgcgttagcgcagtaaaaagagcggacatatgggcatgtgagtgcccgtct 35370769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 51425364 - 51425420
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| |||||||||||| ||||| ||||||||| || ||||| |||| ||||||||    
T  51425364 ttagcacagtagaaagagcggacagacgggcacgagaatgcccatctggacgctagt 51425420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 21393315 - 21393484
Alignment:
Q  29 ttttttattaagctctatcattcttc-aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgttta 127  Q
    |||||||| |||||  |||||||||  ||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||| |||||||     
T  21393315 ttttttatcaagcttgatcattcttttaattctaataattttctccaagatatattaagaaaaactaaaccaacattgatgttgaaaaacacattgtttt 21393414  T
Q  128 tgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    | | ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  21393415 ttatttacatgcgttagcgcagtagaaagagcggacagacgggcacgggagtgcccgtctggacgctagt 21393484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 55 - 203
Target Start/End: Original strand, 15907010 - 15907157
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15907010 aattctaataattttctccaagatatatcaagaaaaactaaac-aacattgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 15907108  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagtttatat 203  Q
    |||| ||||| ||||||||||||||||||||||  |||||||| |||||    
T  15907109 agagcggacagacgggcacgggagtgcccgtctagacgctagtatatat 15907157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 55 - 199
Target Start/End: Complemental strand, 21683312 - 21683169
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||| ||||| ||||||||| |  ||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  21683312 aattctaataatgttctctaagatatatcaagaaaaactaaaccaacattgatgttgaaaa-catactgtttatgagttacatgcgttagcgcaatagaa 21683214  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagttt 199  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||    
T  21683213 agagcggacagacgggcacgggagtgcccgtctgaacgctagttt 21683169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 55 - 198
Target Start/End: Original strand, 20881915 - 20882057
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||| ||||| ||||||||| |  ||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  20881915 aattctaataatgttctctaagatatatcaagaaaaactaaaccaacattgatgttgaaaa-catactgtttatgagttacatgcgttagcgcaatagaa 20882013  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagtt 198  Q
    |||| ||||| || ||||||||||||||||||||||||||||||    
T  20882014 agagcggacagacaggcacgggagtgcccgtctgaacgctagtt 20882057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 18715414 - 18715273
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| |||||||||||||||||| ||||||||||||||||||  ||||| |||||||    
T  18715414 aattctaataattttctccaagatatatcaagaaaaactaaac-aacattgatgttgaaaaacatactgtttatgagttacatgctatagcgtagtagaa 18715316  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| || |||||||||||||||||||||||||||||    
T  18715315 agagcggacaaacaggcacgggagtgcccgtctgaacgctagt 18715273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 18801363 - 18801532
Alignment:
Q  29 ttttttattaagctctatcattcttcaa-ttctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgttta 127  Q
    |||||||| |||||  |||||||||  | |||||||||||||||||||||||||| |  ||||||||| ||||| |||||||||||||||||| ||||||    
T  18801363 ttttttatcaagcttgatcattcttttagttctaataattttctccaagatatatgaagaaaaactaaaccaacattgatgttgaaaaacatactgttta 18801462  T
Q  128 tgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| |||||| |||||| ||||||||||| | ||| |||||||||||||||||||| || ||||||||    
T  18801463 tgagtaacatgcattagcgtagtagaaagagcgaacagacgggcacgggagtgcccgtttggacgctagt 18801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 14463632 - 14463491
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| ||||||||||||||||||  |||||| |||||||||||||||||||||||||    
T  14463632 aattctaataattttctccaagatatatcaagaaaaactaaac-aacattgatgttgaaaaacataccgtttataagttacatgcgttagcgcagtagaa 14463534  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| | ||| |||||| |||||||||||||||| ||||||||    
T  14463533 agagcgaacaaacgggcgcgggagtgcccgtctggacgctagt 14463491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 7456953 - 7456852
Alignment:
Q  86 aaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgt 185  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| ||| ||||||||||||    
T  7456953 aaaaaactaaaccaacattgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagcgaacagacgagcaggggagtgcccgt 7456854  T
Q  186 ct 187  Q
    ||    
T  7456853 ct 7456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 31569497 - 31569319
Alignment:
Q  17 acatatcttacattttttattaagct----ctatcattcttc-aattctaataattttctccaagatatat-tagaaaa---aactaacccaaccttgat 107  Q
    |||||||||||||||||||| |||||    | ||| |||||  |||||||||||||||||| ||||||||| || ||||   ||||||  |||| |||||    
T  31569497 acatatcttacattttttatcaagcttgatcgatcgttcttttaattctaataattttctcgaagatatatataaaaaagaaaactaaagcaacgttgat 31569398  T
Q  108 gttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtct 187  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  31569397 gttgaaaaacatattgtttatgagttacatatgttagcgcagtagaaagagcggacagacgggcac-ggagtgcccgtct 31569319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 23160649 - 23160837
Alignment:
Q  17 acatatcttacattttttattaagctctatcattcttc-aattctaataattttctccaagatatatt-------agaaaaaactaacccaaccttgatg 108  Q
    ||||||||||||||||||||||||||  | |||||||  |||||||||||||||||| ||||| |||        | |||||||||| | ||| | ||||    
T  23160649 acatatcttacattttttattaagcttgaccattcttttaattctaataattttctcaaagatgtatatatataaaaaaaaaactaaacaaacgtcgatg 23160748  T
Q  109 ttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||| |||| |  ||||||||||| || ||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  23160749 ttgaaaagcatactacttatgagttacctgtgttagcgcagtagaaagagcggacagacgggcacgggagtgcccgtctggacgctagt 23160837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 19382970 - 19383055
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||||||||||| || ||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||    
T  19382970 aaaaacatattgtttatgagttatatacgttagcgcagtagaaaaagcggacagacgggcacgggagtgcccgtctggacgctagt 19383055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 31877160 - 31877271
Alignment:
Q  86 aaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgt 185  Q
    ||||||||||  |||| ||||| ||| |||| |||||||||||| |||||||||||||||||||||||||||| ||||| ||||  ||||||||||| ||    
T  31877160 aaaaaactaaatcaacattgatattggaaaaaatattgtttatgtgttacatgcgttagcgcagtagaaagagcggacagacggatacgggagtgccggt 31877259  T
Q  186 ctgaacgctagt 197  Q
    ||| ||||||||    
T  31877260 ctggacgctagt 31877271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 20025689 - 20025814
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaa-acatattgtttatgagttacatgcgttagcgcagtaga 153  Q
    |||||||||||||||||||||||||||| |  ||||| ||| | ||| ||||||||||||| |||||||||| ||||||||||||||||| || || |||    
T  20025689 aattctaataattttctccaagatatatcaagaaaaagtaaactaacattgatgttgaaaaaacatattgttaatgagttacatgcgttatcgtagcaga 20025788  T
Q  154 aagagaggacacacgggcacgggagt 179  Q
    ||||| ||||| ||| ||||| ||||    
T  20025789 aagagcggacaaacgagcacgagagt 20025814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 14603949 - 14604033
Alignment:
Q  113 aaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| ||||| ||||| |||||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||    
T  14603949 aaaaaatattatttatcagttatatgcgttagcgcagtagaaaaagtggacagacgggtacgggagtgcccgtctggacgctagt 14604033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 19214845 - 19214778
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagttta 200  Q
    ||||||||||||||| ||||||| || ||||| ||||||||||||||||||||||| |||||||||||    
T  19214845 tacatgcgttagcgcggtagaaaaagcggacagacgggcacgggagtgcccgtctggacgctagttta 19214778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 18175996 - 18175914
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgct 194  Q
    ||||||||| ||||||| |||||||  |||||||| ||||||||||| ||||| ||||||||| ||||| ||||| |||||||    
T  18175996 aaaaacataatgtttataagttacacacgttagcgtagtagaaagagcggacagacgggcacgagagtgtccgtccgaacgct 18175914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 17102628 - 17102692
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||| ||||||||||||||||||| ||||| | ||||| ||||||||||||||| ||||||||    
T  17102628 tacatgtgttagcgcagtagaaagagcggacagatgggcatgggagtgcccgtctggacgctagt 17102692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 18223805 - 18223887
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgct 194  Q
    ||||||||| ||||||| ||||||   |||||||| ||||||||||| ||||| ||||||||| ||||| ||||| |||||||    
T  18223805 aaaaacataatgtttataagttacgcacgttagcgtagtagaaagagcggacagacgggcacgagagtgtccgtccgaacgct 18223887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 17724581 - 17724638
Alignment:
Q  140 gttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||||||| || ||||| ||||||| ||||||||||||||| ||||||||    
T  17724581 gttagcgcagtagaaaaagcggacagacgggcatgggagtgcccgtctggacgctagt 17724638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 32616959 - 32616898
Alignment:
Q  136 atgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||| |||||||| || ||||| ||||||||||||||||||||||| ||| ||||    
T  32616959 atgcgttagcgtagtagaaaaagcggacagacgggcacgggagtgcccgtctggacgttagt 32616898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 23094602 - 23094666
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||  |||| || ||||||||    
T  23094602 tacatgcgttagcgcagtagaaagagcggacagacgggaacgggagtatccgtttggacgctagt 23094666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 2666144 - 2666203
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtt 198  Q
    ||||||||||||||||| |  ||||| ||||||||||||||||||||||| | |||||||    
T  2666144 cgttagcgcagtagaaaaaacggacagacgggcacgggagtgcccgtctggatgctagtt 2666203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 8848138 - 8848081
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||||| || ||||| |||||||||||||||||| |||| ||||||||    
T  8848138 cgttagcgcagtagaaaaagcggacagacgggcacgggagtgccc-tctggacgctagt 8848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 8909963 - 8910024
Alignment:
Q  136 atgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||| |||||||||||| || || || ||||||||| ||||||||||||| ||||||||    
T  8909963 atgcgtttgcgcagtagaaaaagcgggcagacgggcacgagagtgcccgtctggacgctagt 8910024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 10929423 - 10929476
Alignment:
Q  134 acatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtct 187  Q
    |||||||||| |||||||||||||| ||||| |||||||||  |||||||||||    
T  10929423 acatgcgttaacgcagtagaaagagcggacagacgggcacgatagtgcccgtct 10929476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 16308045 - 16308098
Alignment:
Q  134 acatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtct 187  Q
    ||||||||||||||||||||||||| ||||  |||||||||  |||||||||||    
T  16308045 acatgcgttagcgcagtagaaagagcggactgacgggcacgatagtgcccgtct 16308098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 19002769 - 19002825
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||| ||||||| || ||||| ||||| ||||||||||||||||| ||||||||    
T  19002769 ttagcgcggtagaaaaagcggacagacgggtacgggagtgcccgtctggacgctagt 19002825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 13548399 - 13548340
Alignment:
Q  136 atgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgcta 195  Q
    |||||||||||||||||||| || ||||| ||||||| | || |||||||||| ||||||    
T  13548399 atgcgttagcgcagtagaaaaagcggacagacgggcatgagaatgcccgtctggacgcta 13548340  T

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Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 14603791 - 14603728
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctag 196  Q
    |||||||||||| |||||||||| || ||||| |||||||| |||||| ||||||  |||||||    
T  14603791 tacatgcgttagtgcagtagaaaaagcggacagacgggcaccggagtggccgtcttgacgctag 14603728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 18691791 - 18691735
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||| || ||||| | |||||||||| |||||||||  ||||||||    
T  18691791 ttagcgcagtagaaaaagcggacagatgggcacgggaatgcccgtctagacgctagt 18691735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 22291695 - 22291735
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcac 173  Q
    ||||| |||||||||||||||||||| ||||| ||||||||    
T  22291695 tacattcgttagcgcagtagaaagagcggacagacgggcac 22291735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 4e-49; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 44201577 - 44201736
Alignment:
Q  45 atcattcttc-aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgtta 143  Q
    |||||||||| ||||||||||||||||| ||||||| || |  ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  44201577 atcattcttctaattctaataattttctgcaagatacatcaagaaaaactaaaccaacattgatgttgaaaaacatattgtttatgagttatatgcgtta 44201676  T
Q  144 gcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtttatat 203  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||  |||||||| |||||    
T  44201677 gcgcagtagaaagagcggacagacgggcacgggagtgcccgtctagacgctagtgtatat 44201736  T

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Target: chr1; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 55 - 203
Target Start/End: Original strand, 15723207 - 15723355
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||| ||||||  |  ||| | ||| ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  15723207 aattctaataattttctccaggatataccaagaaacaataaaccaacattgatgttcaaaaacatactgtttatgagttacatgcgttagcgcagtagaa 15723306  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagtttatat 203  Q
    |||| ||||| ||||||||||||||||||||||| |||||||| |||||    
T  15723307 agagcggacagacgggcacgggagtgcccgtctggacgctagtatatat 15723355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 42958614 - 42958757
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttag-cgcagtaga 153  Q
    ||||||||||||||||||||| |||||| |  ||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  42958614 aattctaataattttctccaatatatatcaagaaaaactaaaccaacattgatgttgaaaaacatattgtttacgagttacatgcgttagtggcagtaga 42958713  T
Q  154 aagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| ||||| ||||||||||||||||| |||||||| |||||    
T  42958714 aagagcggacagacgggcacgggagtgccggtctgaacactagt 42958757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 45 - 197
Target Start/End: Original strand, 19193715 - 19193865
Alignment:
Q  45 atcattcttc-aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgtta 143  Q
    |||||||||| ||||||||||||||||| ||||||| |  || ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  19193715 atcattcttctaattctaataattttctgcaagataca--ag-aaaaactaaaccaacattaatgttgaaaaacatattgtttatgagttacatgcgtta 19193811  T
Q  144 gcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||    
T  19193812 gcgcagtagaaagagcggacagacaggcacaggagtgcccgtctggacgctagt 19193865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 74 - 197
Target Start/End: Complemental strand, 46352014 - 46351890
Alignment:
Q  74 aagatatattagaaaaaactaacccaacctt-gatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggca 172  Q
    ||||||||| |  ||||||||| ||||| || |||||||||||||||||| ||||| ||||||||| ||||||||| ||||||||| ||||| | |||||    
T  46352014 aagatatatcaagaaaaactaaaccaacttttgatgttgaaaaacatattatttataagttacatgtgttagcgcaatagaaagagcggacagatgggca 46351915  T
Q  173 cgggagtgcccgtctgaacgctagt 197  Q
    ||||||||| |||||| ||||||||    
T  46351914 cgggagtgctcgtctggacgctagt 46351890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 62 - 164
Target Start/End: Original strand, 46757973 - 46758076
Alignment:
Q  62 ataattttctccaagatatattagaaaaaa-ctaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagag 160  Q
    ||||||||||||||||||||| | |||||| |||| ||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||| || |    
T  46757973 ataattttctccaagatatataaaaaaaaaactaaaccaacattgatattaaaaaacatattgtttatgagttacatgcgttagcccagtagaaatagcg 46758072  T
Q  161 gaca 164  Q
    ||||    
T  46758073 gaca 46758076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 45652505 - 45652595
Alignment:
Q  109 ttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagttt 199  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||| |||| ||||||| |||  ||||||||||    
T  45652505 ttgaaaaacatattgtttgtgagttacatgcgttagcgcagtagaaagagcagacaaacgggtacggaagtgcccatctagacgctagttt 45652595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 7487261 - 7487407
Alignment:
Q  17 acatatcttacattttttattaagctctatcattcttc-aattctaataattttctccaagatatat-tagaaaa---aactaacccaaccttgatgttg 111  Q
    ||||| |||||||||||||| ||| |  ||| |||||  |||||||||||||||||| ||||||||| || ||||   ||||||  |||| |||||||||    
T  7487261 acataacttacattttttatcaagtttgatcgttcttttaattctaataattttctcgaagatatatataaaaaagaaaactaaagcaacgttgatgttg 7487360  T
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagag 158  Q
    ||||||||| |  ||||| ||||||||||||||| | ||||||||||    
T  7487361 aaaaacatactacttatgcgttacatgcgttagcccggtagaaagag 7487407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 2248106 - 2248044
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgcta 195  Q
    |||||| ||||||||||||||||||| ||||| |||| |||||||||| ||||||| ||||||    
T  2248106 tacatgtgttagcgcagtagaaagagcggacagacggacacgggagtgtccgtctggacgcta 2248044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 18504877 - 18504812
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacata 120  Q
    |||||||||||||||||||||||||||| |  |||||||||  |||  ||||||||||||||||||    
T  18504877 aattctaataattttctccaagatatatcaagaaaaactaaaacaatattgatgttgaaaaacata 18504812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 25613993 - 25614040
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtg 180  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||    
T  25613993 tacatgcgttagcgcagtagaaagagcagacagacgggcacgggagtg 25614040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 29696394 - 29696345
Alignment:
Q  138 gcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtct 187  Q
    ||||||||||||||||||||| ||||| |||||||||  |||||||||||    
T  29696394 gcgttagcgcagtagaaagaggggacagacgggcacgatagtgcccgtct 29696345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 41476073 - 41476132
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtt 198  Q
    |||||| |||||||||| || ||||| | || |||||||||| |||||||||||||||||    
T  41476073 cgttagtgcagtagaaaaagcggacagatggacacgggagtgtccgtctgaacgctagtt 41476132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 46123008 - 46123066
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||| |||  | | ||| ||||||||||||||||||||||| ||||||||    
T  46123008 cgttagcgcagtaaaaaatgcgaacagacgggcacgggagtgcccgtctggacgctagt 46123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 22045742 - 22045690
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggaca 164  Q
    ||||||||| ||||||| |||||||  |||||| ||||||||||||| |||||    
T  22045742 aaaaacataatgtttataagttacacacgttagtgcagtagaaagagcggaca 22045690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 9e-44; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 18811244 - 18811385
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  18811244 aattctaataattttctccaagatatatcaagaaaaactaaac-aacattgatgttgaaaaacatactatttatgagttacatgcgttagcgcagtagaa 18811342  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| |||||||||||| |||||||||| ||||||||    
T  18811343 agagtggacagacgggcacgggaatgcccgtctggacgctagt 18811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 59 - 197
Target Start/End: Original strand, 43593764 - 43593904
Alignment:
Q  59 ctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaa---acatattgtttatgagttacatgcgttagcgcagtagaaa 155  Q
    |||||||||||||||||||||||| | |||||||||| ||| | |||||||||||||   ||||||||||||||||||||||| ||||||||||||||||    
T  43593764 ctaataattttctccaagatatatca-aaaaaactaaaccatcattgatgttgaaaaaaaacatattgtttatgagttacatgtgttagcgcagtagaaa 43593862  T
Q  156 gagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||| ||||| ||||||||||||||||||||||| ||||||||    
T  43593863 gagcggacagacgggcacgggagtgcccgtctggacgctagt 43593904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 50377468 - 50377326
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    ||||||||||||||||||||| |||||  |  ||| | ||| ||||| |||||||| | ||||||| |||||||||||||||||||||| ||||||||||    
T  50377468 aattctaataattttctccaaaatataccaagaaacaataaaccaacattgatgttcacaaacatactgtttatgagttacatgcgttaacgcagtagaa 50377369  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  50377368 agagcggacagacgggcacgggagtgcccgtctgaacgctagt 50377326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 19112031 - 19112177
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19112031 aattctaataattttctccaagatatatcaagaaaaactaaac-aacattgatgttgaaaaacatattgtttatgagttacatgtgttagcgcagtagaa 19112129  T
Q  155 agagaggacacacggg-----cacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| |||||     |||||||||||||||||| | ||||||    
T  19112130 agagcggacagacgggtactccacgggagtgcccgtctggaagctagt 19112177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 52374397 - 52374279
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||| ||| | ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52374397 aattctaataattttctccaagatatatcaagaaaaagtaaac-aacattgatgttgaaaaacatactgtttatgagttacatgcgttagcgcagtagaa 52374299  T
Q  155 agagaggacacacgggcacg 174  Q
    |||| ||||| |||||||||    
T  52374298 agagcggacagacgggcacg 52374279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 1701301 - 1701210
Alignment:
Q  108 gttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagttt 199  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| ||||||||||    
T  1701301 gttgaaaaacatattgtttgtgagttacatgcgttagcgcaatagaaagagtggatagacgggcacgggagtgcccgtctggacgctagttt 1701210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 16612332 - 16612220
Alignment:
Q  87 aaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtc 186  Q
    ||||| ||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| | || |||| |||||    
T  16612332 aaaaattaaaccaacattaatgttgaaaaacatattgtttgtgagttacatgcgttagcgcagtagaaagagcggacagacgggtatggaagtgtccgtc 16612233  T
Q  187 tgaacgctagttt 199  Q
     | ||||||||||    
T  16612232 cggacgctagttt 16612220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 13757209 - 13757135
Alignment:
Q  123 gtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||| |||| |||| ||||||||||||| | ||| ||||||||||||||||||||||| ||||||||    
T  13757209 gtttatgagttatatgcattagtgcagtagaaagagcgaacagacgggcacgggagtgcccgtctggacgctagt 13757135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 43593548 - 43593642
Alignment:
Q  59 ctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaa-----acatattgtttatgagttacatgcgttagcgca 148  Q
    |||||||||||||||||||||||| |  ||||||||| ||| | |||||||||||||     ||||||||||||||||||||||| |||||||||    
T  43593548 ctaataattttctccaagatatatcaagaaaaactaaaccatcattgatgttgaaaaaaaacacatattgtttatgagttacatgtgttagcgca 43593642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 14464133 - 14464192
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggc 171  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||||| | ||| ||||||    
T  14464133 aaaaaaatactgtttatgggttacatgcgttagcgcagtagaaagagcgaacagacgggc 14464192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 9296842 - 9296891
Alignment:
Q  134 acatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgccc 183  Q
    ||||||||||||||||||||||||| ||||| |||||||||  |||||||    
T  9296842 acatgcgttagcgcagtagaaagagcggacagacgggcacgatagtgccc 9296891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 35577410 - 35577352
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||| || |||  | ||||| ||||||||||||||||||||||| ||||||||    
T  35577410 cgttagcgcaataaaaaatgcggacagacgggcacgggagtgcccgtctggacgctagt 35577352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 55 - 203
Target Start/End: Original strand, 24079426 - 24079573
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  24079426 aattctaataattttctccaagatatatcaagaaaaactaaac-aacattgatgttaaaaaacatactgtttatgagttacatgcgttagcgcagtagaa 24079524  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagtttatat 203  Q
    |||| ||||| |||| |||||||||||| ||||| |||||||| |||||    
T  24079525 agagcggacagacggacacgggagtgcctgtctggacgctagtatatat 24079573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 25417222 - 25417080
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||| ||||| | ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  25417222 aattctaataattttctccaagatatatcaagaaagactaaacaaacattgatgttgaaaaacataatgtttatgaattacatgcgttagcgcagtagaa 25417123  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| |||||||| |||||| || |||| ||||||||    
T  25417122 agagcggacagacgggcacaggagtgtccatctggacgctagt 25417080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 5783434 - 5783534
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5783434 aattctaataattttctccaagatatattaagaaaaactaaaccaacattgatgttgaaaaacatactgtttatgagttacatgcgttagcgcagtagaa 5783533  T
Q  155 a 155  Q
    |    
T  5783534 a 5783534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 44481451 - 44481332
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||||  |||||||||| | ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  44481451 aattctaataattttctccaagatatatttaaaaaaactaaac-aacattgatgttgaaaaacatattgtttatgagttacatgtattagcgcagtagaa 44481353  T
Q  155 agagaggacacacgggcacgg 175  Q
    |||| ||||| |||| |||||    
T  44481352 agagcggacagacggacacgg 44481332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 31898579 - 31898647
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtttat 201  Q
    ||||| |||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||    
T  31898579 tacatacgttagcgcagtagaaagagcggatagacgggcacgggagtgcccgtctggacgctagtttat 31898647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 2707129 - 2707196
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagttta 200  Q
    ||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||||    
T  2707129 tacatacgttagcgcagtagaaaaagcggacagacgggcacgggagtgcccgtctggacgctagttta 2707196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 24863976 - 24863912
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||||||||||||||||| || ||||| || |||||| ||||||||||||| ||||||||    
T  24863976 tacatgcgttagcgcagtagaaaaagcggacagacaggcacgagagtgcccgtctggacgctagt 24863912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 29406664 - 29406750
Alignment:
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagttt 199  Q
    ||||||||| ||||||| |||||||  ||| ||||||||||||| || ||||| ||||||||  |||||||||| || ||||||||||    
T  29406664 aaaaacataatgtttataagttacacacgt-agcgcagtagaaaaagcggacagacgggcacatgagtgcccgtttggacgctagttt 29406750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 24049147 - 24049087
Alignment:
Q  137 tgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||| ||| |||||||| || ||||| ||||| ||| ||||||||||||||||||||||    
T  24049147 tgcgtttgcgtagtagaaaaagcggacaaacgggtacgcgagtgcccgtctgaacgctagt 24049087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 18817576 - 18817528
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtct 187  Q
    |||||||| ||||||||||| ||| | || |||||||||||||||||||    
T  18817576 cgttagcgtagtagaaagagcggatagacaggcacgggagtgcccgtct 18817528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 55 - 199
Target Start/End: Complemental strand, 21849 - 21705
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  21849 aattctaataattttctccaagatatatcaagaaaaactaaacaaacattgatgttgaaaaacataatgtttatgagttacatgcgttagcgtagtagaa 21750  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagttt 199  Q
    | || |||||   ||||||||||||||||||||| | ||||||||    
T  21749 aaagcggacaactgggcacgggagtgcccgtctggatgctagttt 21705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 29145 - 29291
Alignment:
Q  55 aattctaataattttctccaagatatat-tagaaaa---aactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagt 150  Q
    |||||||||||||||||| ||||||||| || ||||   ||||||  |||| |||||||||||||||||| || ||||||||||||||||||||||| ||    
T  29145 aattctaataattttctcgaagatatatataaaaaagaaaactaaagcaacgttgatgttgaaaaacatactgcttatgagttacatgcgttagcgcggt 29244  T
Q  151 agaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||| ||||| |||| |||||||||||||||||| ||| ||||    
T  29245 agaaagagcggacagacggacacgggagtgcccgtctggacgatagt 29291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 55 - 198
Target Start/End: Complemental strand, 6576 - 6434
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| || ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  6576 aattctaataattttctccaagatatatcatgaaaaactaaac-aacattaatgttgaaaaacatattatttatgagttacatgcgttagcgcaatagaa 6478  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagtt 198  Q
    |||| ||||| || |||||||||||||||||||| | |||||||    
T  6477 agagcggacagacaggcacgggagtgcccgtctggatgctagtt 6434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 18535804 - 18535662
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  |||| |||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  18535804 aattctaataattttctccaagatatatcaagaaaatctaaac-aacattgttgttgaaaaacatactgtttatgagttacatgcgttagcgcagtagaa 18535706  T
Q  155 agagaggacaca-cgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||| ||||| | |||||||||||||||||||||| ||||||||    
T  18535705 agagcggacagaccgggcacgggagtgcccgtctggacgctagt 18535662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 55 - 181
Target Start/End: Complemental strand, 3568653 - 3568526
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaacctt-gatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtaga 153  Q
    |||||||||||||||||||||||||||| |  ||||| ||| ||||| || |||||||||||||||| ||||||| | ||||||| ||||||||||||||    
T  3568653 aattctaataattttctccaagatatatcaagaaaaaataaaccaacttttgatgttgaaaaacatactgtttataaattacatgtgttagcgcagtaga 3568554  T
Q  154 aagagaggacacacgggcacgggagtgc 181  Q
    ||||| ||||| ||||||||||||||||    
T  3568553 aagagcggacagacgggcacgggagtgc 3568526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 39702998 - 39703183
Alignment:
Q  17 acatatcttacattttttattaagctctatcattcttc-aattctaataattttctccaagatatat-tagaaaa---aactaacccaaccttgatgttg 111  Q
    ||||| |||||||||||||| ||| |  ||| |||||  |||||||||||||||||| ||||||||| || ||||   ||||||  |||| |||||||||    
T  39702998 acataacttacattttttatcaagtttgatcgttcttttaattctaataattttctcgaagatatatataaaaaagaaaactaaagcaacgttgatgttg 39703097  T
Q  112 aaaaacatattgtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||||||| || ||||| |||||||| |||||| | |||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  39703098 aaaaacatactgcttatgcgttacatgggttagcccggtagaaagagcggacagacgggcacgggagtgcccgtctggacgctagt 39703183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 12314957 - 12314855
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  ||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  12314957 aattctaataattttctccaagatatataaagaaaaactaaac-aacattgatgttgaaaaacatactgtttatgagttacatgcgttaacgcagtagaa 12314859  T
Q  155 agag 158  Q
    ||||    
T  12314858 agag 12314855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 13796505 - 13796647
Alignment:
Q  55 aattctaataattttctccaagatatatta-gaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtaga 153  Q
    ||||||||||||||| |  ||||||||| | |||||||||||  |||| |||||||| |||||||  ||||||||||||||||| |||||||||| ||||    
T  13796505 aattctaataattttgtt-aagatatatcaagaaaaaactaaagcaacattgatgttaaaaaacacgttgtttatgagttacatacgttagcgcaataga 13796603  T
Q  154 aagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| ||||| ||| ||||| ||||||| ||||| ||||||||    
T  13796604 aagagcggacagacgtgcacgagagtgcctgtctggacgctagt 13796647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 1966451 - 1966329
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||| ||||||  |  ||| | ||| ||||| | |||||| ||||| ||| |||||||||||||||||||||| ||||||||||    
T  1966451 aattctaataattttctccaggatataccaagaaacaataaaccaacatcgatgttcaaaaatatactgtttatgagttacatgcgttaacgcagtagaa 1966352  T
Q  155 agagaggacacacgggcacggga 177  Q
    |||| ||||| ||||||||||||    
T  1966351 agagcggacagacgggcacggga 1966329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 1723503 - 1723429
Alignment:
Q  123 gtttatgagttacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||| |||||||||  |||||||||||| | ||| ||||||||||||||||||||||| ||||||||    
T  1723503 gtttatgagttatatgcgttagtacagtagaaagagcgaacagacgggcacgggagtgcccgtctggacgctagt 1723429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 10206717 - 10206659
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||||||||| |||| || ||||| |||||||||| |||||| ||||| ||||||||    
T  10206717 cgttagcgcagtggaaaaagcggacagacgggcacggaagtgccggtctggacgctagt 10206659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 9080 - 8958
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||| ||||||| | | |||||||||||||||||||||||    
T  9080 aattctaataattttctccaagatatattaagaaaaactaaaccaacattgatgttgaaaaacacattgttttttatttacatgcgttagcgcagtagaa 8981  T
Q  155 agagaggacacacgggcacggga 177  Q
    |||| ||||| ||||||||||||    
T  8980 agagcggacagacgggcacggga 8958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 36897 - 36997
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36897 aattctaataattttctccaagatatattaagaaaaactaaaccaacattgatgttgaaaaacatactgtttatgagttacatgcgttagcgcagtagaa 36996  T
Q  155 a 155  Q
    |    
T  36997 a 36997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 55 - 203
Target Start/End: Original strand, 32196 - 32342
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaa 154  Q
    |||||||||||||||||||||||||||| |  |||| |||| | ||| |||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  32196 aattctaataattttctccaagatatatcaagaaaacctaaacaaacattgatgttgaaaaatataatatttatgagttacatgcgttagcgcagtagaa 32295  T
Q  155 agagaggacacacgggcacgggagtgcccgtctgaacgctagtttatat 203  Q
    | || ||||| ||||||||   |||||||||||| |||||||| |||||    
T  32296 aaagcggacagacgggcac--tagtgcccgtctgtacgctagtatatat 32342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0760 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0760
Description:

Target: scaffold0760; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 132 - 280
Alignment:
Q  29 ttttttattaagctctatcattcttc-aattctaataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgttta 127  Q
    ||||||||||||||  |||||||||| |||||||||||||||||| || |||||| |  ||||||||| ||||| |||||||||||||||||| ||||||    
T  132 ttttttattaagcttgatcattcttctaattctaataattttctcaaatatatatcaataaaaactaaaccaacattgatgttgaaaaacatactgttta 231  T
Q  128 tgagttacatgcgttagcgcagtagaaagagaggacacacgggcacggga 177  Q
     ||||||||||||||| ||||||| ||| |  ||||| ||||||||||||    
T  232 cgagttacatgcgttatcgcagta-aaaaaacggacaaacgggcacggga 280  T

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Target: scaffold0054 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 49814 - 49671
Alignment:
Q  55 aattctaataattttctccaagatatattagaaaaaactaacccaacctt-gatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtaga 153  Q
    |||||||||||||||||||||||||||| |  ||||||||| ||||| || |||||||||||||||| ||||||| | ||||||| |||| | || ||||    
T  49814 aattctaataattttctccaagatatatcaagaaaaactaaaccaacttttgatgttgaaaaacatactgtttataaattacatgtgttatcacaataga 49715  T
Q  154 aagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    | ||| ||||| || ||||| |||||||||||||| ||||||||    
T  49714 aggagcggacatacaggcacaggagtgcccgtctggacgctagt 49671  T

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Target: scaffold0054; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 28715 - 28858
Alignment:
Q  55 aattctaataattttctccaagatatatta-gaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtaga 153  Q
    ||||||||||||||| | |||||||||  | |||||||||||  |||| ||||| || |||||||  ||||||||||||||||| ||||| |||||||||    
T  28715 aattctaataattttgttcaagatataccaagaaaaaactaaatcaacattgatattaaaaaacacgttgtttatgagttacatacgttaacgcagtaga 28814  T
Q  154 aagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    | ||| ||||| |||| ||||| |||||||||||| ||||||||    
T  28815 atgagcggacagacggacacggaagtgcccgtctgtacgctagt 28858  T

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Target: scaffold0077 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 52532 - 52598
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagttt 199  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  52532 tacatgcgttagcgcagtagaaagagcggacagacgggcacgggagtgcccgtctggacgctagttt 52598  T

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Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 163
Target Start/End: Complemental strand, 40391 - 40361
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggac 163  Q
    |||||||||||||||||||||||||||||||    
T  40391 tacatgcgttagcgcagtagaaagagaggac 40361  T

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Target: scaffold0039 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 102296 - 102230
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagttt 199  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  102296 tacatgcgttggcgcagtagaaagagcggacaaacgggcacgggagtgcccgtctggacgctagttt 102230  T

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Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 84236 - 84296
Alignment:
Q  137 tgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||| ||||| |||||| || ||||| | ||||||||||||||||||||  ||||||||    
T  84236 tgcgtttgcgcaatagaaaaagcggacagatgggcacgggagtgcccgtctcgacgctagt 84296  T

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Target: scaffold0337 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 152 - 245
Alignment:
Q  62 ataattttctccaagatatattagaaaaaactaacccaaccttgatgttgaaaaacatattgtttatgagttacatgcgttagcgcagtagaaa 155  Q
    |||||||| | |||||||||| |  |||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  152 ataattttgttcaagatatatcaagaaaaactaaatcaacattgatgttgaaaaacatattgtttatgagttacatgccttaacgtagtagaaa 245  T

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Target: scaffold0337; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 786 - 852
Alignment:
Q  136 atgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtttata 202  Q
    |||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||||    
T  786 atgcgttagcgcagtagaaaaagcggacagacgggcacgggagtgcccgtctggacgctagtatata 852  T

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Target: scaffold0072 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 46342 - 46283
Alignment:
Q  139 cgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtt 198  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||    
T  46342 cgttagcgcagtagaaaaagcggacagacgggcacgggagtgcccgtctggacgctagtt 46283  T

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Target: scaffold0281 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 4581 - 4642
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgct 194  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||    
T  4581 tacatacgttagcgcagtagaaagagtggacagacgggcacgggagtacccgtctggacgct 4642  T

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Target: scaffold0553 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 6613 - 6549
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||    
T  6613 tacatacgttagcgcagtagaaaaagcggacagacgggtacgggagtgcccgtctggacgctagt 6549  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 163199 - 163142
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaa 190  Q
    ||||||| |||||||||||||||||| ||||| | ||| |||||||||||||||||||    
T  163199 tacatgcattagcgcagtagaaagagcggacagatgggtacgggagtgcccgtctgaa 163142  T

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Target: scaffold0320 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 14208 - 14264
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    |||||| ||||||||||| ||||| ||||||||| |||||||| |||||||||||||    
T  14208 ttagcgtagtagaaagagcggacagacgggcacgagagtgcccatctgaacgctagt 14264  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 38666 - 38602
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagt 197  Q
    ||||| ||||||||||||||||| ||  |||| |||| |||||||||||||||||| | ||||||    
T  38666 tacattcgttagcgcagtagaaaaagttgacagacggacacgggagtgcccgtctggatgctagt 38602  T

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Target: scaffold0220 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 28561 - 28495
Alignment:
Q  133 tacatgcgttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagttt 199  Q
    ||||| |||||||||| |||||| | |||||| | ||||||| ||||||||||||| ||||| ||||    
T  28561 tacatacgttagcgcactagaaaaataggacagaggggcacgagagtgcccgtctggacgctcgttt 28495  T

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Target: scaffold0422 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 10386 - 10431
Alignment:
Q  142 tagcgcagtagaaagagaggacacacgggcacgggagtgcccgtct 187  Q
    |||| ||||||||| || ||||| ||||||||||||||||||||||    
T  10386 tagcacagtagaaaaagcggacagacgggcacgggagtgcccgtct 10431  T

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Target: scaffold0179 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 28444 - 28501
Alignment:
Q  141 ttagcgcagtagaaagagaggacacacgggcacgggagtgcccgtctgaacgctagtt 198  Q
    ||||||||||||||| || ||| | ||||||| ||||||||| ||||| |||||||||    
T  28444 ttagcgcagtagaaaaagcggatagacgggcatgggagtgcctgtctggacgctagtt 28501  T

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