View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15656_high_4 (Length: 448)
Name: NF15656_high_4
Description: NF15656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15656_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 393; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 16 - 432
Target Start/End: Original strand, 34330255 - 34330671
Alignment:
| Q |
16 |
ataggcaaataccgacatgaaaccaaggggactattaccatttgttatcaatcgaaacttcacatgggtgcttgagatactgcgggtgcatttaattcaa |
115 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
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| T |
34330255 |
ataggcaaataccgacatgaaaccagggggactattaccatttgttatcaatcgaaacttcacatgggtgcttgagatactgagagtgcatttaattcaa |
34330354 |
T |
|
| Q |
116 |
tagtgttcatattacatactacataatctgaaaaatagaattattaggaagagtccaagaaagtcaaagtcacactcgtgcgaatttcctgcataaaatg |
215 |
Q |
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| T |
34330355 |
tagtgttcatattacatactacataatctgaaaaatagaattattaggaagagtccaagaaagtcaaagtcacactcgtgcgaatttcctgcataaaatg |
34330454 |
T |
|
| Q |
216 |
tactgccatgtatttgaaaattgtacaatatttctaaacaatggggtccatgaatggtaccaaacatatactgtaacctgaaaaccaaaactactaagga |
315 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
34330455 |
tactgccatgtatttgaaaattgtacaatatttcaaaacaatggggtccatgaatggtaccaaacatatactgtaacctgaaaaccaaaactactaagca |
34330554 |
T |
|
| Q |
316 |
gaaaaagtttgggaataccatttctgttttcagttatccgaatataaagatacataaaaactgaaataattcaaattctgttgtttggcaagtgtggagt |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
34330555 |
gaaaaagtttgggaataccatttctgttttcagttatccgaatataaagatacataaaaaatgaaataattcaaattctgttgtttggcaagtgtggagt |
34330654 |
T |
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| Q |
416 |
agaagtcgcttagataa |
432 |
Q |
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| T |
34330655 |
agaagtcgcttagataa |
34330671 |
T |
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