View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15656_low_9 (Length: 378)
Name: NF15656_low_9
Description: NF15656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15656_low_9 |
 | |
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| [»] chr4 (1 HSPs) |
| |
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| [»] chr7 (15 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 18925385 - 18925763
Alignment:
| Q |
1 |
cttttctctattacacaaacctcaatgactcaaatcatcatttaaagttacttggccttgaaaacatgaaatacaaaatcagcagtgacaaagtgttaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
18925385 |
cttttctctattacacaaacctcaatgactcaaatcatcatttaaagttacttggccttgaaaacatgaaatacaaaatcagcagtgacaaagtgttaga |
18925484 |
T |
|
| Q |
101 |
gacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttggag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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|
| T |
18925485 |
gacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttcctcgttacttggag |
18925584 |
T |
|
| Q |
201 |
aaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatacttaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
18925585 |
aaacaatatccactaagtgtatcaaatgattttacacataatctcaactatataaacaataccattccaaactacacggcaccagaagttgtatacttaa |
18925684 |
T |
|
| Q |
301 |
ctgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattctgcctttactta |
378 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
18925685 |
ctgcaagaagttatggaatggatgcgacaaaggattataatgtaacttggaattttgaagttgattctgcctttactta |
18925763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 147; Significance: 2e-77; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 105 - 378
Target Start/End: Complemental strand, 4631275 - 4631001
Alignment:
| Q |
105 |
gtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttggagaaac |
204 |
Q |
| |
|
||||||||||||| || |||||| ||||||||||||| || | |||| |||||||||||||| |||||||||| ||||||||| |||||||||||||| |
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|
| T |
4631275 |
gtttatagagtcaacgctggtgaaaatcaagttccaccaaattatgatacaggtatgtttcgcaattgggacaatgattttcctcgttacttggagaaag |
4631176 |
T |
|
| Q |
205 |
aatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatacttaactgc |
304 |
Q |
| |
|
|||||||||| |||||||||| | ||||| |||| |||| |||||| |||||||||||||| |||| ||||| |||||||||| ||| ||||||||||| |
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|
| T |
4631175 |
aatatccacttagtgtatcaagttattttggacatcatctaaactatttaaacaataccatttcaaattacactgcaccagaagctgtttacttaactgc |
4631076 |
T |
|
| Q |
305 |
aagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattctgcctttactta |
378 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| | |||||||| |
|
|
| T |
4631075 |
gagaagttatggaatggatgcaacaaaggattacaatgtaacttggaattttgaagttgattcttcttttactta |
4631001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 4864374 - 4864007
Alignment:
| Q |
1 |
cttttctctattacacaaacctcaatgactcaaatcatcatttaaagttacttggccttgaaaacatgaaatacaaaatcagcagtgacaaagtgttaga |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||| || |||| || | ||||| | |||| |||| ||| ||| || | | ||||||| |||||| |
|
|
| T |
4864374 |
cttttctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacgaactaccaagttcttaacgacaaagcgttaga |
4864275 |
T |
|
| Q |
101 |
gacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttggag |
200 |
Q |
| |
|
||||||||||||||||| || ||||| | ||||||||||| || |||| || |||||||||||| |||||||||| ||||||||| ||||||||||| |
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|
| T |
4864274 |
gacggtttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggag |
4864175 |
T |
|
| Q |
201 |
aaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatacttaa |
300 |
Q |
| |
|
||||||||||||| ||| |||||| |||||||| |||| |||| ||||||| |||||| ||||||| ||| ||||| |||||||||||||| ||||||| |
|
|
| T |
4864174 |
aaacaatatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaa |
4864075 |
T |
|
| Q |
301 |
ctgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattct |
367 |
Q |
| |
|
||||||||||||| ||| | |||| ||| |||| || |||||||||||| ||||||||||||||||| |
|
|
| T |
4864074 |
ctgcaagaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattct |
4864007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 367
Target Start/End: Original strand, 4845655 - 4846025
Alignment:
| Q |
1 |
cttttctctattacacaaacctcaatgactcaaatcatcatttaaagttacttggccttgaaaacatgaaatacaaaatcagcagtgacaaagtgttaga |
100 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| || |||| || ||| ||||| |||| |||| ||||| |||| | | ||| |||| || || |
|
|
| T |
4845655 |
cttttctctattacacaaacccagatgacttaaattattatttcaaattaattggctttgacaacagagaatacgaaattcgtaatgataaagctttgga |
4845754 |
T |
|
| Q |
101 |
gacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttggag |
200 |
Q |
| |
|
|| |||||||||||||| |||||||| |||||||||| || |||| |||| |||||||||||||| |||||||||| ||||||||| ||||||||||| |
|
|
| T |
4845755 |
gatggtttatagagtcaatgttggtgaaaatcaagttcaaccaagtgatgatacaggtatgtttcgcaattgggacaatgattttcctcgttacttggag |
4845854 |
T |
|
| Q |
201 |
aaacaatatccactaagtgtatcaaatgattttacac---ataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatact |
297 |
Q |
| |
|
||| |||||||||| |||||||||| | || | | || |||| |||||| |||||||||| |||||||| ||||| |||||||||| |||||||| |
|
|
| T |
4845855 |
aaagaatatccacttagtgtatcaagtttttatggaagtgatcatctaaactatttaaacaatactattccaaattacactgcaccagaagctgtatact |
4845954 |
T |
|
| Q |
298 |
taactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattct |
367 |
Q |
| |
|
||||||||||||||||||||| | ||| |||| |||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
4845955 |
taactgcaagaagttatggaaagtatgtgacagaggattataatgtaacttggaatttcgaagttgattct |
4846025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 99 - 378
Target Start/End: Complemental strand, 4637211 - 4636931
Alignment:
| Q |
99 |
gagacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttgg |
198 |
Q |
| |
|
|||| |||||||||||||| ||||||| | ||||||||||||| |||| |||| |||||||||||||| |||||| ||| ||||||||| |||||||| |
|
|
| T |
4637211 |
gagatggtttatagagtcaacgttggtcaaaatcaagttccaccaagtgatgatacaggtatgtttcgcaattggggcaatgattttcctctttacttgg |
4637112 |
T |
|
| Q |
199 |
agaaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatactt |
298 |
Q |
| |
|
||||| | || ||| |||||||||| ||| ||||||||||| || | ||| ||||||| ||||||||| |||| |||||||||||||| ||||| |
|
|
| T |
4637111 |
agaaagagtacccatctagtgtatcaagtgactttacacataacctaacatataaaaacaatgtcattccaaattacattgcaccagaagttgtgtactt |
4637012 |
T |
|
| Q |
299 |
aactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattctgcctttactta |
378 |
Q |
| |
|
||||||||||||||| |||||| ||| ||||||||||||||||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
4637011 |
aactgcaagaagttacggaatgtatgagacaaaggattataatgtaacttggaactttgaagttgattctgcttttactta |
4636931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 138 - 367
Target Start/End: Complemental strand, 4663306 - 4663076
Alignment:
| Q |
138 |
ccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttggagaaacaatatccactaagtgtatcaaatgattttacac |
237 |
Q |
| |
|
|||| |||| |||| ||||||||||||||||||||||| || |||| |||| |||||||||||| | ||||||||| ||||||||||| ||||||| | |
|
|
| T |
4663306 |
ccacaaagtgatgatacaggtatgtttcgttattgggaaaatgattctcctcgttacttggagatagaatatccacaaagtgtatcaagtgattttggag |
4663207 |
T |
|
| Q |
238 |
ataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatacttaactgcaagaagttatggaatggatgcgacaaaggatta |
337 |
Q |
| |
|
|| |||| |||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| |||||||| | ||| |||| ||||||| |
|
|
| T |
4663206 |
atcatctaaactatttaaacaataccattccaaattacactgcaccagaaactgtatacttaactgcaagaaattatggaaagtatgtgacagaggatta |
4663107 |
T |
|
| Q |
338 |
taatgtaacttgg-attttgaagttgattct |
367 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |
|
|
| T |
4663106 |
taatgtaacttggaattttgaggttgattct |
4663076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 364
Target Start/End: Original strand, 4696919 - 4697197
Alignment:
| Q |
87 |
gacaaagtgttagagacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttc |
186 |
Q |
| |
|
||||||| ||||||||||||||||||||||| || |||| ||||||||||||| || | || || |||||||||||| | |||||||| ||||||| |
|
|
| T |
4696919 |
gacaaagcgttagagacggtttatagagtcaatgtgggtggcaatcaagttccaccaaaccaagatactggtatgtttcgtaactgggacaatgattttc |
4697018 |
T |
|
| Q |
187 |
cttgttacttggagaaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccaga |
286 |
Q |
| |
|
|| |||||||||||||||||||||||| ||| |||||| |||||||| |||| |||| ||||||| |||||| ||||||| ||| ||||| |||||||| |
|
|
| T |
4697019 |
ctcgttacttggagaaacaatatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccaga |
4697118 |
T |
|
| Q |
287 |
agttgtatacttaactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgat |
364 |
Q |
| |
|
|| ||| |||||||||||||||||| |||| |||||| |||| |||||| |||||||||||| |||| ||||||||| |
|
|
| T |
4697119 |
agctgtgtacttaactgcaagaagtcgtggattggatgagacagaggatttcaatgtaacttggaatttcgaagttgat |
4697197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 96 - 378
Target Start/End: Original strand, 4783573 - 4783856
Alignment:
| Q |
96 |
ttagagacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttact |
195 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | |||||||||||| || | || ||||| ||||||||| |||||||||| |||| |||| |||||| |
|
|
| T |
4783573 |
ttagagacggtttatagagtcaacgttggtcaaaatcaagttccagcaaaccaagatacaggcatgtttcgtaattgggacaatgattctcctcgttact |
4783672 |
T |
|
| Q |
196 |
tggagaaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtata |
295 |
Q |
| |
|
|||||||| | || ||| |||||||||| ||| ||||||||||| || | ||| ||||||| ||||||||| |||| |||||||||| ||| || |
|
|
| T |
4783673 |
tggagaaagagtacccatctagtgtatcaagtgactttacacataacctaacatataaaaacaatgtcattccaaattacattgcaccagaaggtgttta |
4783772 |
T |
|
| Q |
296 |
cttaactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattctgcctttactta |
378 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
4783773 |
cttaactgcaagaagttatggaatgtatgagacagaggattacaatgtaacttggaactttgaagttgattctgcttttactta |
4783856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 96 - 378
Target Start/End: Original strand, 4816002 - 4816285
Alignment:
| Q |
96 |
ttagagacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttact |
195 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | |||||||||||| || | || ||||| ||||||||| |||||||||| |||| |||| |||||| |
|
|
| T |
4816002 |
ttagagacggtttatagagtcaacgttggtcaaaatcaagttccagcaaaccaagatacaggcatgtttcgtaattgggacaatgattctcctcgttact |
4816101 |
T |
|
| Q |
196 |
tggagaaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtata |
295 |
Q |
| |
|
|||||||| | || ||| |||||||||| ||| ||||||||||| || | ||| ||||||| ||||||||| |||| |||||||||| ||| || |
|
|
| T |
4816102 |
tggagaaagagtacccatctagtgtatcaagtgactttacacataacctaacatataaaaacaatgtcattccaaattacattgcaccagaaggtgttta |
4816201 |
T |
|
| Q |
296 |
cttaactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattctgcctttactta |
378 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
4816202 |
cttaactgcaagaagttatggaatgtatgagacagaggattacaatgtaacttggaactttgaagttgattctgcttttactta |
4816285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 99 - 367
Target Start/End: Complemental strand, 4667295 - 4667023
Alignment:
| Q |
99 |
gagacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttgg |
198 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||| || | || || |||||||||||| |||||||||| ||||||||| ||||||||| |
|
|
| T |
4667295 |
gagacggtttatagagtcagcgttggtgaaagtcaagttccacctggtgacgatactggtatgtttcgtaattgggacaatgattttcctcgttacttgg |
4667196 |
T |
|
| Q |
199 |
agaaacaatatccactaagtgtatcaaatgattttacac---ataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtata |
295 |
Q |
| |
|
||||||||||||||| ||| |||||| | ||||| || || ||| |||||| || | ||||| |||||||| ||||| |||||||||||||| || |
|
|
| T |
4667195 |
agaaacaatatccacaaagcatatcaagttattttggacctgatcatccaaactatttacaaaatactattccaaattacactgcaccagaagttgtgta |
4667096 |
T |
|
| Q |
296 |
cttaactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattct |
367 |
Q |
| |
|
|||||||||||||||||||||||||||||| | | || |||||||||| || ||| ||||| ||||||||||| |
|
|
| T |
4667095 |
cttaactgcaagaagttatggaatggatgccaaagagaattataatgtgacatggaattttaaagttgattct |
4667023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 4673155 - 4672837
Alignment:
| Q |
1 |
cttttctctattacacaaacctcaatgactcaaatcatcatttaaagttacttggccttgaaaacatgaaatacaaaatcagcagtgacaaagtgttaga |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| ||||||| || | ||||| | | || |||| | ||||| |||| | || |||| || || |
|
|
| T |
4673155 |
cttttctctattacacaaacctcagtgacccaaattatcatttgaaatcacttgacttagacaacacggaataccaaattcataacgaaaaagctttgga |
4673056 |
T |
|
| Q |
101 |
gacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttggag |
200 |
Q |
| |
|
| |||||||||||||| ||||||||| | ||||||||||| || | || || |||||||||||| |||||||||| ||||||| | ||||||||||| |
|
|
| T |
4673055 |
aatggtttatagagtcaacgttggtgaaagtcaagttccaccgggtgacgatactggtatgtttcgtaattgggacaatgattttcatggttacttggag |
4672956 |
T |
|
| Q |
201 |
aaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatacttaa |
300 |
Q |
| |
|
|||||||||||||| |||||||||| ||| | || ||| ||||||||| | ||||||||||||||||||| ||||| |||||||||| ||| ||| ||| |
|
|
| T |
4672955 |
aaacaatatccacttagtgtatcaagtgagtatatgcatcatctcaactttttaaacaataccattccaaattacactgcaccagaagctgtttacgtaa |
4672856 |
T |
|
| Q |
301 |
ctgcaagaagttatggaat |
319 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
4672855 |
ctgcaagaagttatggaat |
4672837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 4653874 - 4653609
Alignment:
| Q |
99 |
gagacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttgg |
198 |
Q |
| |
|
||||| |||||||| |||| ||||||||| ||||||||||||| || || || ||| |||||||| ||||||| ||||||| |||| ||||||| | |
|
|
| T |
4653874 |
gagacagtttatagtgtcaacgttggtgaaaatcaagttccaccaaacctagatactggtttgtttcgtaattgggataacgattatcctcgttacttag |
4653775 |
T |
|
| Q |
199 |
agaaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatactt |
298 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| | || ||||||||||| ||||||||| |||||||| |||| |||||||||| ||||||| | |
|
|
| T |
4653774 |
agaaacaatatccactaagtgtatcaagtgattttgtaaatcatctcaactataaaaacaatacaattccaaattacatcgcaccagaagctgtatacct |
4653675 |
T |
|
| Q |
299 |
aactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttga |
363 |
Q |
| |
|
|||||| ||||||||||||||| ||| ||| ||||||| |||||||||||| |||| |||||||| |
|
|
| T |
4653674 |
aactgcgagaagttatggaatgaatgtcacagaggattacaatgtaacttggaatttcgaagttga |
4653609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 108 - 367
Target Start/End: Original strand, 4711822 - 4712085
Alignment:
| Q |
108 |
tatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgattttccttgttacttggagaaacaat |
207 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||| || | || ||||||||||||||| ||||||||| ||||||||| |||| |||| ||| ||| |
|
|
| T |
4711822 |
tatagagtcaacgttggtcaaaatcaagttccaccaaaccaagatacaggtatgtttcgtaattgggacagtgattttcctctttacctggaaaaagaat |
4711921 |
T |
|
| Q |
208 |
atccactaagtgtatcaaatgattttacac---ataatctcaactatgtaaacaataccattccaaactacacggcaccagaagttgtatacttaactgc |
304 |
Q |
| |
|
|||||| ||||||||||| || || | | || ||| |||||| |||||||||||||||| || ||||| |||||||||| ||||||||| ||||| |
|
|
| T |
4711922 |
atccacaaagtgtatcaactgtttatggaagtgatcatccaaactatttaaacaataccattcccaattacactgcaccagaagctgtatactttactgc |
4712021 |
T |
|
| Q |
305 |
aagaagttatggaatggatgcgacaaaggattataatgtaacttgg-attttgaagttgattct |
367 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
4712022 |
aagaagttatggaatggatgtgacagaggattataatgtaacttggaatttcaaagttgattct |
4712085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 86 - 312
Target Start/End: Complemental strand, 4644074 - 4643848
Alignment:
| Q |
86 |
tgacaaagtgttagagacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggtatgtttcgttattgggacaacgatttt |
185 |
Q |
| |
|
|||||||| || |||| |||||||||||||| ||||||| | ||||||||||| || | || ||||||||||||||| |||||||||| |||| | |
|
|
| T |
4644074 |
tgacaaagctttggagatggtttatagagtcaacgttggtcgaattcaagttccaccaaaccaagatacaggtatgtttcgtaattgggacaatgattat |
4643975 |
T |
|
| Q |
186 |
ccttgttacttggagaaacaatatccactaagtgtatcaaatgattttacacataatctcaactatgtaaacaataccattccaaactacacggcaccag |
285 |
Q |
| |
|
||| |||||||||||||||||||||| ||||| ||||||||||||| | |||| |||| |||||| |||| ||| |||||||||| ||||| ||||||| |
|
|
| T |
4643974 |
cctcgttacttggagaaacaatatccgctaagcgtatcaaatgattatgaacatcatctaaactatttaaaaaatgccattccaaattacactgcaccag |
4643875 |
T |
|
| Q |
286 |
aagttgtatacttaactgcaagaagtt |
312 |
Q |
| |
|
||| ||| || |||||||||||||||| |
|
|
| T |
4643874 |
aagctgtttatttaactgcaagaagtt |
4643848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 4637309 - 4637275
Alignment:
| Q |
1 |
cttttctctattacacaaacctcaatgactcaaat |
35 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4637309 |
cttttctctattacacaaacctcaatgacccaaat |
4637275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4667393 - 4667351
Alignment:
| Q |
1 |
cttttctctattacacaaacctcaatgactcaaatcatcattt |
43 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| ||||||| |
|
|
| T |
4667393 |
cttttctctattacacaaacctcagtgacccaaattatcattt |
4667351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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