View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15658_low_11 (Length: 432)
Name: NF15658_low_11
Description: NF15658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15658_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 69 - 425
Target Start/End: Original strand, 9462131 - 9462486
Alignment:
| Q |
69 |
atttcggtattcgacgatttatctatttaaacgtgcatctctcttctttaacaaactgccaaaatgatatttaactattgtacaaagtaattcagtttaa |
168 |
Q |
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| T |
9462131 |
atttcggtatttggcaatttagctatttaaacgtgcacatctcttctttaacaaacttccaatatgatatttaactattgaacaaatta-ttaagtttaa |
9462229 |
T |
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| Q |
169 |
at-tcctattttcgtctaattatatgtcggaaaaatatagatgtcacataagtttacaacaattagtggaaaactacac--tgaattagacatttcttct |
265 |
Q |
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| T |
9462230 |
aagtcctgttgttgtctaattatatgtcggaaaaatagagatgatacatgagcttaaaa---ttagtagcaaactacacactgaagttcacatttcttct |
9462326 |
T |
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| Q |
266 |
gaaatacaagaatcaccaactatcaaatacctgttttttatttcttctgtaactacaaagaaaatcaatacattgatcatatcaaaccaaatatgatgta |
365 |
Q |
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| T |
9462327 |
gaaatacaagaatcaccaactatcaaatacctgttttttatttcttctgtaattacaaagaaaatcaatacattgatcatatcaaaccaaatatgatgta |
9462426 |
T |
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| Q |
366 |
attaccaaaataattaatgactaaatatttaacctagaaaaggcttttgttttcatctca |
425 |
Q |
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| T |
9462427 |
attaccaaaataattaatgactaaatatttaacctagaaaaggcttttgttttcatctca |
9462486 |
T |
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