View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15658_low_3 (Length: 738)

Name: NF15658_low_3
Description: NF15658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15658_low_3
NF15658_low_3
[»] chr4 (71 HSPs)
chr4 (321-728)||(4389466-4389876)
chr4 (152-326)||(4389897-4390070)
chr4 (1-129)||(25483389-25483517)
chr4 (1-129)||(3340860-3340988)
chr4 (1-128)||(36629290-36629418)
chr4 (1-99)||(44621055-44621153)
chr4 (1-117)||(54017582-54017698)
chr4 (2-97)||(50630762-50630857)
chr4 (1-129)||(22028342-22028472)
chr4 (1-115)||(55933113-55933227)
chr4 (1-129)||(41370410-41370538)
chr4 (5-97)||(50002483-50002575)
chr4 (5-129)||(54936253-54936376)
chr4 (1-99)||(1731652-1731750)
chr4 (1-115)||(4390090-4390204)
chr4 (2-116)||(39404072-39404186)
chr4 (4-129)||(36608636-36608761)
chr4 (1-129)||(22027936-22028064)
chr4 (1-105)||(32941122-32941226)
chr4 (2-116)||(23817668-23817783)
chr4 (1-129)||(31691205-31691335)
chr4 (1-96)||(54108966-54109060)
chr4 (1-99)||(39792865-39792963)
chr4 (2-116)||(44620714-44620827)
chr4 (34-115)||(20825922-20826003)
chr4 (1-129)||(18879859-18879987)
chr4 (1-96)||(52884748-52884844)
chr4 (1-96)||(50459774-50459869)
chr4 (6-99)||(49302964-49303057)
chr4 (1-116)||(10245973-10246087)
chr4 (1-132)||(34004557-34004687)
chr4 (1-96)||(36572072-36572167)
chr4 (1-96)||(39404451-39404546)
chr4 (34-129)||(49076807-49076901)
chr4 (2-108)||(22183260-22183366)
chr4 (17-99)||(44620422-44620504)
chr4 (1-130)||(16888790-16888919)
chr4 (1-74)||(45496858-45496931)
chr4 (1-89)||(4955332-4955420)
chr4 (1-129)||(18932724-18932852)
chr4 (1-124)||(43827493-43827616)
chr4 (34-98)||(54343014-54343078)
chr4 (2-129)||(3271841-3271971)
chr4 (1-129)||(54108589-54108718)
chr4 (1-129)||(51768035-51768163)
chr4 (1-103)||(3244452-3244554)
chr4 (1-99)||(34646654-34646752)
chr4 (59-125)||(11702278-11702344)
chr4 (1-130)||(16889510-16889639)
chr4 (34-130)||(19504782-19504878)
chr4 (2-99)||(20826271-20826368)
chr4 (34-103)||(39698945-39699014)
chr4 (40-117)||(43174233-43174310)
chr4 (34-130)||(45489688-45489784)
chr4 (62-129)||(23817431-23817497)
chr4 (1-68)||(49880213-49880280)
chr4 (19-89)||(15841383-15841453)
chr4 (62-97)||(19895410-19895445)
chr4 (1-96)||(52884940-52885038)
chr4 (73-127)||(1731570-1731624)
chr4 (2-116)||(3341182-3341296)
chr4 (1-71)||(6975489-6975559)
chr4 (1-55)||(54741227-54741281)
chr4 (1-116)||(2740753-2740866)
chr4 (1-57)||(2741124-2741180)
chr4 (34-98)||(45489338-45489402)
chr4 (15-66)||(11197293-11197344)
chr4 (3-66)||(41707503-41707565)
chr4 (1-56)||(54017750-54017805)
chr4 (34-107)||(3700443-3700516)
chr4 (1-129)||(49076427-49076551)
[»] chr8 (58 HSPs)
chr8 (1-126)||(6876842-6876967)
chr8 (9-130)||(5915928-5916048)
chr8 (2-103)||(30441139-30441240)
chr8 (1-116)||(3669740-3669855)
chr8 (1-99)||(9483194-9483292)
chr8 (1-98)||(34834929-34835026)
chr8 (1-129)||(34835262-34835390)
chr8 (1-129)||(34835528-34835656)
chr8 (1-129)||(34835794-34835922)
chr8 (1-116)||(3670113-3670227)
chr8 (1-129)||(18371970-18372099)
chr8 (1-98)||(45122677-45122774)
chr8 (1-96)||(45122067-45122162)
chr8 (2-99)||(3038297-3038394)
chr8 (1-117)||(40518124-40518240)
chr8 (40-116)||(40579259-40579335)
chr8 (1-99)||(9482611-9482709)
chr8 (1-99)||(9608798-9608896)
chr8 (1-99)||(40579513-40579611)
chr8 (1-98)||(1014253-1014350)
chr8 (16-129)||(6651562-6651674)
chr8 (2-99)||(37544497-37544594)
chr8 (1-131)||(20870548-20870678)
chr8 (1-98)||(25561823-25561921)
chr8 (1-99)||(33113374-33113472)
chr8 (6-98)||(6731953-6732045)
chr8 (1-129)||(9309408-9309535)
chr8 (1-99)||(40518635-40518733)
chr8 (1-129)||(147504-147632)
chr8 (1-98)||(30359324-30359421)
chr8 (27-116)||(41129067-41129156)
chr8 (16-96)||(147888-147968)
chr8 (3-98)||(1013879-1013974)
chr8 (1-107)||(70273-70379)
chr8 (34-108)||(8919142-8919216)
chr8 (2-127)||(9309033-9309160)
chr8 (5-99)||(18371668-18371761)
chr8 (1-99)||(30359662-30359760)
chr8 (1-107)||(45121655-45121761)
chr8 (2-99)||(8918771-8918868)
chr8 (5-99)||(45123061-45123157)
chr8 (1-85)||(9609138-9609222)
chr8 (8-96)||(32640542-32640630)
chr8 (1-108)||(1513913-1514020)
chr8 (42-129)||(43274612-43274699)
chr8 (2-116)||(45121900-45122014)
chr8 (1-129)||(5420704-5420832)
chr8 (42-129)||(41972255-41972341)
chr8 (1-99)||(9507835-9507933)
chr8 (34-103)||(18380022-18380089)
chr8 (2-60)||(43274825-43274883)
chr8 (1-97)||(12283926-12284021)
chr8 (69-117)||(3037958-3038006)
chr8 (34-86)||(16524451-16524503)
chr8 (48-127)||(18372262-18372342)
chr8 (19-62)||(12156702-12156745)
chr8 (1-99)||(32305530-32305628)
chr8 (15-97)||(43398077-43398159)
[»] chr5 (48 HSPs)
chr5 (1-129)||(34753003-34753130)
chr5 (1-130)||(40296291-40296420)
chr5 (1-116)||(6500503-6500618)
chr5 (3-128)||(32487448-32487573)
chr5 (1-91)||(41170687-41170777)
chr5 (1-118)||(15370152-15370269)
chr5 (33-130)||(26899994-26900090)
chr5 (1-130)||(27502012-27502141)
chr5 (2-129)||(624250-624378)
chr5 (1-116)||(3295005-3295120)
chr5 (1-116)||(6500875-6500990)
chr5 (1-108)||(41632835-41632942)
chr5 (1-103)||(299542-299644)
chr5 (1-99)||(18603127-18603225)
chr5 (1-99)||(36492224-36492322)
chr5 (34-130)||(42405573-42405668)
chr5 (1-129)||(25327988-25328117)
chr5 (1-129)||(15370455-15370583)
chr5 (1-92)||(13415774-13415865)
chr5 (1-99)||(3295352-3295449)
chr5 (2-129)||(1028493-1028621)
chr5 (1-130)||(36568544-36568672)
chr5 (2-99)||(33747825-33747922)
chr5 (1-97)||(26074665-26074761)
chr5 (1-116)||(6224249-6224364)
chr5 (2-97)||(12662661-12662756)
chr5 (1-128)||(35150060-35150185)
chr5 (1-98)||(11416985-11417082)
chr5 (1-116)||(9498645-9498759)
chr5 (1-99)||(26075168-26075267)
chr5 (3-83)||(29549278-29549358)
chr5 (35-95)||(38427306-38427366)
chr5 (34-84)||(795254-795304)
chr5 (16-97)||(24489215-24489296)
chr5 (8-97)||(26074155-26074244)
chr5 (1-98)||(38427601-38427697)
chr5 (34-114)||(623904-623984)
chr5 (2-77)||(36522266-36522341)
chr5 (28-86)||(5723811-5723869)
chr5 (1-98)||(26590918-26591015)
chr5 (34-129)||(301037-301132)
chr5 (15-60)||(13112604-13112649)
chr5 (50-130)||(24489583-24489664)
chr5 (1-129)||(35167814-35167943)
chr5 (5-116)||(2411064-2411175)
chr5 (15-66)||(13042606-13042657)
chr5 (3-69)||(26074818-26074885)
chr5 (34-99)||(13785639-13785704)
[»] chr3 (57 HSPs)
chr3 (1-117)||(22304622-22304738)
chr3 (1-116)||(29644892-29645007)
chr3 (1-116)||(32462890-32463005)
chr3 (1-130)||(37990614-37990744)
chr3 (1-129)||(35946575-35946704)
chr3 (1-97)||(12114571-12114667)
chr3 (1-116)||(43346780-43346896)
chr3 (6-112)||(22303653-22303759)
chr3 (1-99)||(42342097-42342195)
chr3 (1-129)||(52634729-52634856)
chr3 (1-116)||(42342378-42342493)
chr3 (1-99)||(15772907-15773005)
chr3 (1-129)||(22303931-22304060)
chr3 (1-130)||(29644557-29644686)
chr3 (1-129)||(37990953-37991082)
chr3 (1-127)||(41359743-41359870)
chr3 (1-99)||(32589756-32589854)
chr3 (3-110)||(25739421-25739528)
chr3 (2-109)||(45395650-45395757)
chr3 (1-98)||(39934963-39935060)
chr3 (3-115)||(33803243-33803355)
chr3 (1-129)||(54017793-54017921)
chr3 (1-97)||(54018207-54018303)
chr3 (17-99)||(3135461-3135543)
chr3 (1-98)||(25755447-25755544)
chr3 (9-97)||(39389131-39389219)
chr3 (1-103)||(21832348-21832448)
chr3 (34-108)||(41359489-41359563)
chr3 (34-99)||(31190095-31190160)
chr3 (2-116)||(1634305-1634418)
chr3 (1-95)||(32462569-32462663)
chr3 (1-98)||(49336694-49336792)
chr3 (1-99)||(15773245-15773345)
chr3 (1-89)||(4823708-4823796)
chr3 (18-98)||(53577434-53577514)
chr3 (1-109)||(44160544-44160649)
chr3 (57-117)||(22304302-22304362)
chr3 (1-101)||(39914305-39914405)
chr3 (1-80)||(3135099-3135178)
chr3 (40-131)||(11662044-11662134)
chr3 (1-99)||(45901767-45901865)
chr3 (34-99)||(50612454-50612519)
chr3 (18-129)||(54017524-54017636)
chr3 (52-99)||(8328374-8328421)
chr3 (1-100)||(9240202-9240301)
chr3 (1-99)||(42584831-42584927)
chr3 (1-66)||(8327957-8328022)
chr3 (3-80)||(47964544-47964621)
chr3 (1-58)||(52634993-52635050)
chr3 (34-74)||(39336002-39336042)
chr3 (37-116)||(37726585-37726664)
chr3 (16-62)||(17735035-17735081)
chr3 (16-62)||(19036304-19036350)
chr3 (76-129)||(9239941-9239994)
chr3 (16-61)||(17731949-17731994)
chr3 (16-61)||(19033180-19033225)
chr3 (34-116)||(33175649-33175733)
[»] chr1 (51 HSPs)
chr1 (1-130)||(44290434-44290563)
chr1 (1-129)||(44290800-44290930)
chr1 (9-130)||(32168673-32168795)
chr1 (1-110)||(41157044-41157153)
chr1 (1-99)||(3537606-3537704)
chr1 (1-109)||(48588485-48588593)
chr1 (2-116)||(17294631-17294746)
chr1 (1-99)||(41759536-41759634)
chr1 (1-129)||(39066178-39066305)
chr1 (1-97)||(41157428-41157524)
chr1 (34-129)||(37555815-37555909)
chr1 (3-129)||(45493951-45494077)
chr1 (1-99)||(14318920-14319018)
chr1 (1-99)||(26661529-26661627)
chr1 (1-130)||(40082460-40082589)
chr1 (1-118)||(41142425-41142543)
chr1 (1-129)||(66449-66577)
chr1 (2-102)||(24600318-24600418)
chr1 (1-129)||(31767138-31767266)
chr1 (1-97)||(37556165-37556260)
chr1 (1-129)||(50052001-50052128)
chr1 (2-96)||(9955962-9956057)
chr1 (1-116)||(26661888-26662003)
chr1 (34-129)||(45084462-45084557)
chr1 (1-115)||(5319957-5320070)
chr1 (1-75)||(32594747-32594821)
chr1 (1-98)||(34364978-34365075)
chr1 (2-91)||(38804370-38804459)
chr1 (1-99)||(3550773-3550868)
chr1 (34-114)||(11977030-11977110)
chr1 (1-129)||(34364560-34364688)
chr1 (1-116)||(37850591-37850705)
chr1 (1-68)||(44043810-44043877)
chr1 (1-99)||(11977333-11977431)
chr1 (1-129)||(3875308-3875436)
chr1 (1-129)||(22077472-22077600)
chr1 (1-96)||(45839684-45839779)
chr1 (1-115)||(22077101-22077215)
chr1 (1-127)||(29798252-29798378)
chr1 (34-99)||(34649524-34649589)
chr1 (18-130)||(50051665-50051776)
chr1 (1-98)||(5528762-5528859)
chr1 (1-116)||(66079-66192)
chr1 (1-129)||(22077806-22077933)
chr1 (34-97)||(19283464-19283527)
chr1 (1-98)||(5575157-5575252)
chr1 (47-129)||(21378036-21378118)
chr1 (2-96)||(30630648-30630742)
chr1 (21-67)||(9956212-9956258)
chr1 (1-129)||(24131965-24132090)
chr1 (3-60)||(35154049-35154106)
[»] chr2 (50 HSPs)
chr2 (1-127)||(36005860-36005985)
chr2 (1-99)||(37106241-37106339)
chr2 (1-118)||(962651-962768)
chr2 (1-129)||(5542602-5542730)
chr2 (1-129)||(6421438-6421566)
chr2 (1-117)||(14745656-14745772)
chr2 (1-129)||(37105977-37106105)
chr2 (2-129)||(15511473-15511599)
chr2 (1-99)||(15880316-15880414)
chr2 (1-99)||(36178612-36178710)
chr2 (2-130)||(6422164-6422292)
chr2 (1-129)||(42514702-42514830)
chr2 (1-116)||(41283465-41283580)
chr2 (6-130)||(16590941-16591066)
chr2 (17-130)||(23346305-23346418)
chr2 (1-129)||(40163349-40163478)
chr2 (2-130)||(3673122-3673250)
chr2 (1-99)||(5543005-5543103)
chr2 (10-128)||(6421793-6421911)
chr2 (1-95)||(33731701-33731795)
chr2 (1-127)||(35580703-35580828)
chr2 (1-92)||(5367508-5367599)
chr2 (1-131)||(36178146-36178276)
chr2 (1-129)||(1769945-1770073)
chr2 (1-93)||(36784273-36784365)
chr2 (1-99)||(6713029-6713128)
chr2 (1-87)||(28254258-28254342)
chr2 (1-129)||(38796593-38796725)
chr2 (1-99)||(40679636-40679734)
chr2 (2-99)||(37632604-37632701)
chr2 (1-96)||(7598281-7598376)
chr2 (5-117)||(14745282-14745395)
chr2 (20-99)||(3672773-3672852)
chr2 (10-99)||(6421688-6421777)
chr2 (1-98)||(28531322-28531419)
chr2 (38-130)||(31899079-31899170)
chr2 (40-99)||(29676621-29676680)
chr2 (2-56)||(33561501-33561555)
chr2 (1-98)||(40733570-40733667)
chr2 (34-99)||(40733968-40734033)
chr2 (15-66)||(22062834-22062885)
chr2 (15-66)||(28226404-28226455)
chr2 (15-98)||(29676975-29677058)
chr2 (1-55)||(36178320-36178374)
chr2 (34-99)||(7598687-7598752)
chr2 (3-96)||(12529038-12529131)
chr2 (19-64)||(37895103-37895148)
chr2 (1-89)||(30313230-30313318)
chr2 (9-56)||(31468800-31468847)
chr2 (2-60)||(25390314-25390372)
[»] chr6 (43 HSPs)
chr6 (2-130)||(2578419-2578547)
chr6 (1-129)||(35210257-35210384)
chr6 (1-96)||(3409312-3409407)
chr6 (1-99)||(29518556-29518654)
chr6 (1-99)||(29518973-29519071)
chr6 (1-99)||(32741232-32741330)
chr6 (1-129)||(16454628-16454756)
chr6 (1-116)||(16454960-16455075)
chr6 (3-130)||(3415513-3415642)
chr6 (1-129)||(1846801-1846928)
chr6 (1-129)||(2377807-2377935)
chr6 (1-97)||(16107731-16107827)
chr6 (2-129)||(2579850-2579976)
chr6 (1-116)||(10074353-10074468)
chr6 (1-99)||(3409713-3409811)
chr6 (1-118)||(14748330-14748443)
chr6 (1-130)||(2843607-2843737)
chr6 (1-130)||(2378179-2378308)
chr6 (2-129)||(26544103-26544230)
chr6 (1-98)||(2579500-2579597)
chr6 (1-109)||(3058279-3058387)
chr6 (1-116)||(2578825-2578940)
chr6 (1-99)||(10073998-10074096)
chr6 (1-99)||(10073623-10073721)
chr6 (34-126)||(12085014-12085106)
chr6 (34-129)||(2579087-2579181)
chr6 (34-129)||(12071668-12071763)
chr6 (15-128)||(31714736-31714849)
chr6 (34-127)||(5832007-5832099)
chr6 (1-106)||(6999796-6999901)
chr6 (1-97)||(1127413-1127509)
chr6 (52-99)||(3409405-3409452)
chr6 (47-129)||(16108150-16108233)
chr6 (1-116)||(593697-593814)
chr6 (34-91)||(1950200-1950257)
chr6 (1-112)||(10911619-10911730)
chr6 (2-97)||(12092491-12092586)
chr6 (1-56)||(32460630-32460685)
chr6 (2-67)||(8481980-8482045)
chr6 (1-73)||(9062383-9062454)
chr6 (2-73)||(6071186-6071257)
chr6 (16-67)||(11637760-11637811)
chr6 (16-62)||(22605299-22605345)
[»] chr7 (52 HSPs)
chr7 (1-129)||(11845244-11845372)
chr7 (1-129)||(37533341-37533469)
chr7 (2-129)||(1085593-1085720)
chr7 (1-115)||(23368-23482)
chr7 (1-98)||(36939741-36939838)
chr7 (1-129)||(6054613-6054741)
chr7 (1-97)||(40094783-40094879)
chr7 (1-129)||(45754768-45754895)
chr7 (1-116)||(22567029-22567144)
chr7 (34-129)||(47129455-47129549)
chr7 (1-99)||(37533018-37533115)
chr7 (18-99)||(9901713-9901794)
chr7 (1-130)||(34218010-34218139)
chr7 (1-97)||(7517633-7517729)
chr7 (7-99)||(37167840-37167932)
chr7 (1-116)||(30244323-30244438)
chr7 (1-97)||(45433294-45433390)
chr7 (1-96)||(19122784-19122879)
chr7 (1-108)||(29157618-29157725)
chr7 (1-129)||(30245130-30245254)
chr7 (1-117)||(30032620-30032736)
chr7 (1-108)||(24177488-24177595)
chr7 (36-99)||(37532758-37532821)
chr7 (1-96)||(45434689-45434784)
chr7 (1-116)||(30253545-30253656)
chr7 (4-130)||(118276-118403)
chr7 (5-107)||(14681567-14681667)
chr7 (4-74)||(1085280-1085350)
chr7 (34-99)||(28300575-28300641)
chr7 (1-129)||(47129148-47129275)
chr7 (1-103)||(8128444-8128546)
chr7 (1-99)||(40230298-40230396)
chr7 (1-95)||(41854687-41854781)
chr7 (1-74)||(7554078-7554151)
chr7 (49-130)||(30253671-30253752)
chr7 (69-129)||(5825562-5825621)
chr7 (1-57)||(22566711-22566767)
chr7 (1-68)||(16569249-16569316)
chr7 (1-68)||(16596346-16596413)
chr7 (1-83)||(24838724-24838807)
chr7 (1-99)||(28300260-28300359)
chr7 (43-97)||(4719305-4719359)
chr7 (49-130)||(30244453-30244534)
chr7 (49-129)||(30245256-30245336)
chr7 (15-60)||(21619091-21619136)
chr7 (1-97)||(36534795-36534889)
chr7 (2-115)||(20599368-20599483)
chr7 (40-112)||(41910580-41910652)
chr7 (15-66)||(21416181-21416232)
chr7 (16-131)||(40094389-40094503)
chr7 (16-62)||(8802568-8802614)
chr7 (2-128)||(36623014-36623140)
[»] scaffold0702 (2 HSPs)
scaffold0702 (1-129)||(491-619)
scaffold0702 (45-130)||(123-208)
[»] scaffold0391 (2 HSPs)
scaffold0391 (1-129)||(1083-1211)
scaffold0391 (1-129)||(1660-1796)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-99)||(5035-5133)
scaffold0078 (1-68)||(5410-5477)
[»] scaffold0734 (1 HSPs)
scaffold0734 (1-97)||(5449-5546)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-99)||(47413-47511)


Alignment Details
Target: chr4 (Bit Score: 365; Significance: 0; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 321 - 728
Target Start/End: Complemental strand, 4389876 - 4389466
Alignment:
Q  321 cttggtggaatttcagtactccgcattgggctaccctcccacc---ctcttctttcttctgcgcctgcgcaatttcaccgttccttgcaagacatcctca 417  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||    
T  4389876 cttggtggaatttcagtactccgcattgggctaccctcccaccaccctcttctttctactgctcctgcgcaatttcaccgtgccttgcaagacatcctca 4389777  T
Q  418 tcatcatgaagcgaaaacacaccaaagcttttaccaatgtcctcatgtgcatctattttgctttgtaaatccctatgaaccttccttttatctttagccg 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  4389776 tcatcatgaagcgaaaacacaccaaagcttttaccaatgtcctcatgtgcatctattttgttttgtaaatccctatgaaccttacttttatttttagccg 4389677  T
Q  518 gcgccttttttctatttcccgtttgcaaatttattgccaatactactctaaaatgttttacagtggactgcatcaagtagacaagtctaacccaagaata 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4389676 gcgccttttttctatttcccgtttgcaaatttattgccaatactactctaaaatgttttacagtggactgcatcaagtagacaagtctaacccaagaata 4389577  T
Q  618 tattttccttttattgggaattcagatatgttgggccaataaagctaaaaccaggaggcttaacgtgtctttcccttgttttaataactcccaattcatg 717  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4389576 tattttccctttattgggaattcagatatgttgggccaataaagctaaaaccagaaggcttaacgtgtctttcccttgttttaataactcccaattcatg 4389477  T
Q  718 ccctagttcat 728  Q
    |||||||||||    
T  4389476 ccctagttcat 4389466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 152 - 326
Target Start/End: Complemental strand, 4390070 - 4389897
Alignment:
Q  152 tgagcaatcaccaggtgcgtgagcagcaaattcaaactttttaccaatggtgtttaaacaaactagcttttactccaaaatctcatgcaccaatatgcaa 251  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  4390070 tgagcaatcaccaggtgcgtgagcaacaaattcaaactttt-accaatggtgtttaaagaaaatagcttttactccaaaatctcatgtaccaatatgcaa 4389972  T
Q  252 caataaactactccacgatatcaaacatcaagcactcctggaaacaacacaccattccactcacctcttcttggt 326  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4389971 caataaactactctacgatatcaaacatcaagcactcctggaaacaacacaccattccactcacctcttcttggt 4389897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 25483389 - 25483517
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| || |||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||     
T  25483389 cttataagtaagaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 25483488  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    |||||||  ||||||||| ||||||||||    
T  25483489 gtctccctggctcccccagtgacccaaca 25483517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 3340860 - 3340988
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| || ||  ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||     
T  3340860 cttataagtaagaggacccataaacccactgccttaaggttttgggtaagagtgtggtgtctttcttgcttgtggggttgttctagcctcgatgtggacg 3340959  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||||||  |||||||||| ||||||||||    
T  3340960 gtctcctgagctcccccagtgacccaaca 3340988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36629290 - 36629418
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||     
T  36629290 cttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacg 36629389  T
Q  101 gtctcccaagctcccc-caatgacccaac 128  Q
    ||| | || ||||||| ||||||||||||    
T  36629390 gtcccacatgctcccctcaatgacccaac 36629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44621055 - 44621153
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| | | ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44621055 cttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttattctagcctcgatgtggac 44621153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 54017698 - 54017582
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||||||||| |||||||||||| ||| |||||||||| || ||||||||||||||||||||||||     
T  54017698 cttataagtaagaggacccataaacccattgccttaaggttttaggtaagagtgtgatgtctctcttgcttatgtggttgttctagcctcgatgtggacg 54017599  T
Q  101 gtctcccaagctccccc 117  Q
    ||||||| |||||||||    
T  54017598 gtctccctagctccccc 54017582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 50630857 - 50630762
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    |||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  50630857 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttttagcctcgatgtgg 50630762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22028472 - 22028342
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||| ||||||| ||||||||||| |||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||     
T  22028472 cttattagtaagaggacccataaactcattgtcttaatgttttgggtaagagtgtggtgtctctcttgcttgtgaggttgttctagcctcaatgtggacg 22028373  T
Q  101 gtctccc-aagctcccc-caatgacccaaca 129  Q
    ||| ||| ||||||||| || ||||||||||    
T  22028372 gtcccccaaagctcccctcactgacccaaca 22028342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 55933227 - 55933113
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||| |||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||||     
T  55933227 cttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttacttgtacagttgttctagcctcgatgtggacg 55933128  T
Q  101 gtctcccaagctccc 115  Q
    ||| |||||||||||    
T  55933127 gtcccccaagctccc 55933113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 41370410 - 41370538
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||| ||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||     
T  41370410 cttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtagtgtctctcttgcttgagtggttgttctagcctcgatgtggacg 41370509  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| | || ||||| ||||||||||    
T  41370510 gtcccccgaacttccccagtgacccaaca 41370538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 50002483 - 50002575
Alignment:
Q  5 taagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  50002483 taagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgcggttgttctagcctcgatgtgg 50002575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 54936253 - 54936376
Alignment:
Q  5 taagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtct 104  Q
    ||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||||  | | || ||||||||||||||||||||||||||||     
T  54936253 taagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcac-tatgtggttgttctagcctcgatgtggacagtcc 54936351  T
Q  105 cccaagctcccccaatgacccaaca 129  Q
    ||| |||||||||| ||||||||||    
T  54936352 cccgagctcccccagtgacccaaca 54936376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1731750 - 1731652
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||| ||||| |||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  1731750 cttataaataagaggacccataaaccaattgccttaaggttttgggtaagagtgtggtgtttctcttgcttgtgtggttgttctagcctcaatgtggac 1731652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 4390204 - 4390090
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| || || | | ||||||| ||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||||| ||||     
T  4390204 cttataagtaagaggatcctttagcacattgcgttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcagttgttctagcctcgatgcggacg 4390105  T
Q  101 gtctcccaagctccc 115  Q
    |||||||||||||||    
T  4390104 gtctcccaagctccc 4390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 39404072 - 39404186
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||| ||||||| ||| |  |||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||| |    
T  39404072 ttataagtaagaggactcataaactcatagcattaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacgg 39404171  T
Q  102 tctcccaagctcccc 116  Q
    || ||| ||||||||    
T  39404172 tcccccgagctcccc 39404186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 36608761 - 36608636
Alignment:
Q  4 ataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtc 103  Q
    |||||||||| || |||||||  |||||| ||||||||||||||||||||||||||| |||||  || ||| |||||||||||||||||||||||| |||    
T  36608761 ataagtaagaggatccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggacggtc 36608662  T
Q  104 tcccaagctcccccaatgacccaaca 129  Q
     ||||||||||||   ||||||||||    
T  36608661 ccccaagctcccctcgtgacccaaca 36608636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22028064 - 22027936
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||| ||||  |||||||||||||||||| |||||||| ||||| |||| || ||||||| ||| |||||||||||||    
T  22028064 cttataagtaagaggacccataaacatattgccttaaggttttgggtaagaatgtggtgtctctctcgcttatgtggttgttttagtctcgatgtggaca 22027965  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| | || |||||||  |||||||||||    
T  22027964 gtccctcaggctcccctcatgacccaaca 22027936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32941226 - 32941122
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| | | ||||||| |||||  |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  32941226 cttataaataagagggctcataaactcattgccttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcggttgttctagcctcgatgtggaca 32941127  T
Q  101 gtctc 105  Q
    |||||    
T  32941126 gtctc 32941122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 23817783 - 23817668
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||  ||||||| |||||  ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| |    
T  23817783 ttataagtaagaggattcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgctagtgtggttgttctagcctcgatgtggacgg 23817684  T
Q  102 tctccca-agctcccc 116  Q
    || |||| ||||||||    
T  23817683 tcccccatagctcccc 23817668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 31691205 - 31691335
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtg--gtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||||||||||  || | |||||||||||| || |||||||||||||||||||||    
T  31691205 cttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggcgtctatctcttgcttgtacgattgttctagcctcgatgtgga 31691304  T
Q  99 cagtctcccaagctcccccaatgacccaaca 129  Q
    |  ||   | |||||||||||||||||||||    
T  31691305 cgatccttcgagctcccccaatgacccaaca 31691335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 54108966 - 54109060
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| ||||||||||| |||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  54108966 cttataagtaagaggacccataaacccattgccttaag-ttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcttcgatgtg 54109060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39792963 - 39792865
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||| |||| || || ||||| |||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  39792963 cttataagaaagaggaaccgtaaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 39792865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 44620714 - 44620827
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||||||||||| |||    ||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| |    
T  44620714 ttataagtaagaggacccataaac-cataaccttaaggttttgggtaagagtgtggtttctctcttgcttgtgcggttgttatatcctcgatgtggacgg 44620812  T
Q  102 tctcccaagctcccc 116  Q
    || ||||||||||||    
T  44620813 tcccccaagctcccc 44620827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 20825922 - 20826003
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctccc 115  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| |||| ||||||    
T  20825922 ttaaggttttgggtaagagtgtggtgtttctcttccttatgcggttgttctagccttgatgtggacagtcccccatgctccc 20826003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18879859 - 18879987
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||||||||| ||||||  |||   |||||||||||||||||||||||  || ||| ||| ||||| |||||||||||| |||||||||||     
T  18879859 cttataagtaagatgacctataaacctatttccttaaggttttgggtaagagtgtgacgtctcttttggttgtgtggttgttctagcttcgatgtggacg 18879958  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    |||  || |||||||||||||||||||||    
T  18879959 gtcctccgagctcccccaatgacccaaca 18879987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 52884748 - 52884844
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttggg-taagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    |||||||||||||||| | |||||| |||||  ||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  52884748 cttataagtaagatgatcgataaacccattgccttaaggttttggggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcgatgtg 52884844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 50459774 - 50459869
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| ||| ||||||| |||| | |||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  50459774 cttataagtaagaggactcataaacccattatcttaaggttttaggtaagagcgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtg 50459869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 49302964 - 49303057
Alignment:
Q  6 aagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||||| ||| |||| |||||||| |||||||||||||    
T  49302964 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtatctcttacttatgcgattgttctatcctcgatgtggac 49303057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10245973 - 10246087
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||| |||||| ||  |  ||||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||     
T  10245973 cttataagtaagaggacc-ataaacccaaagccttaaggttttgggtaagagtgtggtgtctcccttgcttgtctggttgttctagcctcgatgtggacg 10246071  T
Q  101 gtctcccaagctcccc 116  Q
     || ||||||||||||    
T  10246072 ctcccccaagctcccc 10246087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 34004687 - 34004557
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| ||||   |||||||||| | ||||||||||  || |||||  |||||||||||||||||||||||||||| ||     
T  34004687 cttataagtaagaggacccataaactcattcc-ttaaggttttcgataagagtgtgccgtctctctcccttgtgcggttgttctagcctcgatgtgaacg 34004589  T
Q  101 gtctcccaagctcccccaatgacccaacaagc 132  Q
    ||||||| |||||| |  ||||||||||||||    
T  34004588 gtctcccgagctcctctcatgacccaacaagc 34004557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 36572072 - 36572167
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| ||||||||||  |||||  |||||||||||||| ||||| |||||| ||||| |||||||||||||||| ||||||||||||    
T  36572072 cttataagtaagaagacccataaatccattgccttaaggttttgggttagagtatggtgtctctctcgcttgtgcggttgttcaagcctcgatgtg 36572167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39404451 - 39404546
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| |||||||||||  || |  ||||||||||||| |||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  39404451 cttataagtaagaggacccataaacctatagccttaaggttttgggcaagaatgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtg 39404546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 49076901 - 49076807
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    |||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||  ||||||| | |||||||||||    
T  49076901 ttaaggttttgggttagagtgtggtgtctttcttgcttgtgcggttgttctagcctcgatgtggactgtcccctgagctccctc-atgacccaaca 49076807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 22183366 - 22183260
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||| | ||||||||||| |||||  |||||||||||| ||||||||||| || |||||  ||||| ||||||||||||||||||||||||| |    
T  22183366 ttataagtaaaaggacccataaacccattgccttaaggttttggataagagtgtggcgtctctctcacttgtacggttgttctagcctcgatgtggacgg 22183267  T
Q  102 tctccca 108  Q
    || ||||    
T  22183266 tccccca 22183260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 44620422 - 44620504
Alignment:
Q  17 cccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||||    
T  44620422 cccataaacccattgccttaaggttttgggtaagagtgtgatgtttctcttgcttgtgtggttgttctaaccttgatgtggac 44620504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 16888919 - 16888790
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||||  ||| |||||| |||||| ||| ||||||||||||||||||| ||| ||||||| ||||||| |||||||||  ||||||| |||     
T  16888919 cttataagtaagagaacctataaactcattgtcttacggttttgggtaagagtgtgatgtctctcttgtttgtgcgattgttctagtttcgatgtagacg 16888820  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    ||| || ||||||||||  ||| |||||||    
T  16888819 gtcccctaagctcccccgctgatccaacaa 16888790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45496858 - 45496931
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtg 74  Q
    ||||||||||||| |||| |||||| |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  45496858 cttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttgcttgtg 45496931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4955420 - 4955332
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcct 89  Q
    ||||||||||||| ||| ||||||| |||||  |||||||||||||||||||||||| || |||||| |||||||||||| ||||||||    
T  4955420 cttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttacttgtgcggttgctctagcct 4955332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 18932852 - 18932724
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| ||||||||||| |||||  |||||||||| |||||||||||||||| |||||| |||| | ||||||| ||||||||||||| ||     
T  18932852 cttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctcttacttgagtggttgttatagcctcgatgtgtacg 18932753  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| |||| | ||  ||||||||||    
T  18932752 gtcccccgagcttctccggtgacccaaca 18932724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 43827493 - 43827616
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| ||||||||||  |||||  ||||||||| || |||||||||||||| |||||| ||||||||||||||||| |||||||||||||     
T  43827493 cttataaataagaggacccataaattcattgccttaaggttt-ggataagagtgtggtgtctctcttacttgtgcggttgttctaacctcgatgtggacg 43827591  T
Q  101 gtctcccaagc-tcccccaatgacc 124  Q
    ||| ||| ||| |||| ||||||||    
T  43827592 gtcccccgagcttccctcaatgacc 43827616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 54343078 - 54343014
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  54343078 ttaaggttttgggtaagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtgga 54343014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 3271841 - 3271971
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtg-gtgtttctc-ttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||  ||||||||||  ||||  ||||||||||||||||||||||| || | |||| ||  || || ||||||||||||||||||||||||    
T  3271841 ttataagtaagagaacccataaacctattgccttaaggttttgggtaagagtgtgtgtctctctcgtttattatgtggttgttctagcctcgatgtggac 3271940  T
Q  100 agt-ctcccaagctcccccaatgacccaaca 129  Q
    ||| | ||| |||||||||||||||||||||    
T  3271941 agtccccccgagctcccccaatgacccaaca 3271971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 54108589 - 54108718
Alignment:
Q  1 cttataagtaagatgacccataaaca-cattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||| | ||||||||||   |||||  |||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||| |||||| |    
T  54108589 cttataagtaaaaggacccataaaattcattgccttaaggttttggctaagagtgtggtgtctatcttgcttgtgtggttgttctagcctcaatgtgg-c 54108687  T
Q  100 agtctccca-agctcccccaatgacccaaca 129  Q
     ||| |||| |||||||||| ||||||||||    
T  54108688 ggtcccccatagctcccccagtgacccaaca 54108718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 51768163 - 51768035
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| ||| ||||||| |||||| |||||||||||||||| |||  | ||| |||||| ||| || | |||||||| |||||||||||||     
T  51768163 cttataaataagaggactcataaactcattgtcttaaggttttgggtaaaagtacgatgtctctcttacttatgggattgttctaacctcgatgtggacg 51768064  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||||||||| || |||  |||||||||||    
T  51768063 gtctcccaaacttccctcatgacccaaca 51768035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3244554 - 3244452
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||| |||| ||||||||||||| ||||  || |||||  |||||  |||||||| ||||||||||||| ||    
T  3244554 cttataagtaagaggacccataaactcattgtcttaaagttttgggtaagaatgtgtcgtctctctcacttgtatggttgttccagcctcgatgtgggca 3244455  T
Q  101 gtc 103  Q
    |||    
T  3244454 gtc 3244452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34646752 - 34646654
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||| ||||| ||| ||||||| |||||  ||||||||||||||||||||||||||| ||||| |  |||| |||||||||||||| | |||||||    
T  34646752 cttataactaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctctggtctgtgtggttgttctagccttgttgtggac 34646654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 11702344 - 11702278
Alignment:
Q  59 gtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgaccc 125  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||  |||||||  |||||||    
T  11702344 gtttctcttgcttgtgcggttgttctagcctcgatgtgaacagtccccctcgctcccctcatgaccc 11702278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 16889639 - 16889510
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||  |||||||  | ||  |||| ||||||||||||||| |||||| |||||| |||||| | |||||||| |||||||||||||     
T  16889639 cttataagtaagaggattcataaacctactgccttaaagttttgggtaagagtatggtgtctctcttccttgtgtgattgttctaacctcgatgtggacg 16889540  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    ||| | | ||||||||   |||||||||||    
T  16889539 gtccctcgagctccccacgtgacccaacaa 16889510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 19504782 - 19504878
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctccca-agctcccccaatgacccaacaa 130  Q
    |||| ||||||||||||||||||| || | ||||||||||| |||||||||||||||||||  | | ||| |||| ||||||||| ||||||||||||    
T  19504782 ttaaagttttgggtaagagtgtggcgtctatcttgcttgtgtggttgttctagcctcgatgcag-cggtcccccatagctcccccgatgacccaacaa 19504878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 20826271 - 20826368
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||  |||||||||| ||| |  ||||  |||| |||||||||||| ||| |||||| ||| |||| ||||||||||||||||||||||    
T  20826271 ttataagtaagagaacccataaacccatagccttaacattttaggtaagagtgtgatgtctctcttccttatgcgattgttctagcctcgatgtggac 20826368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 39699014 - 39698945
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtc 103  Q
    ||||||||||| |||||||||| |  | |||||||||||||||||| |||||| ||||||||||||||||    
T  39699014 ttaaggttttgagtaagagtgtagcatctctcttgcttgtgcggttattctagtctcgatgtggacagtc 39698945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 43174233 - 43174310
Alignment:
Q  40 ttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctccccc 117  Q
    ||||||||||||||||||||| |||||  |||||| |||||||| ||||| ||||||||| ||| ||| |||||||||    
T  43174233 ttttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagccttgatgtggacggtcccccgagctccccc 43174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 45489784 - 45489688
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaacaa 130  Q
    |||||||||||||||| |||||||||| ||||| |||||   ||||||||||| |||||||||| |  || ||||| |||| ||| |||||||||||    
T  45489784 ttaaggttttgggtaatagtgtggtgtctctctcgcttgcatggttgttctagtctcgatgtggccgatcccccaaactcctccagtgacccaacaa 45489688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 23817497 - 23817431
Alignment:
Q  62 tctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||||||| ||| |||||||||||||||||||||||| || ||||| ||||||||| ||||||||||    
T  23817497 tctcttgctagtgtggttgttctagcctcgatgtggacggt-tcccaggctcccccagtgacccaaca 23817431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 49880213 - 49880280
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttg 68  Q
    ||||||||||||| ||||||||||| || ||  ||||||||||||||||||| ||||||| |||||||    
T  49880213 cttataagtaagaggacccataaacccactgccttaaggttttgggtaagagcgtggtgtctctcttg 49880280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 15841453 - 15841383
Alignment:
Q  19 cataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcct 89  Q
    |||||||||||||  ||||||||||||||||||||||| ||| |||||  |||||| ||||| ||||||||    
T  15841453 cataaacacattgccttaaggttttgggtaagagtgtgatgtctctctcacttgtgtggttgctctagcct 15841383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 62 - 97
Target Start/End: Original strand, 19895410 - 19895445
Alignment:
Q  62 tctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||||||||||||||||||||||||||    
T  19895410 tctcttgcttgtgcggttgttctagcctcgatgtgg 19895445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 52884940 - 52885038
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggtttt-gggtaagagtgtggtg--tttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| || |||||||| |||||  |||||||||| |||||||| |||||||  | ||||||  ||||| ||||| |||||||||||||||    
T  52884940 cttataagtaagaggatccataaacccattgccttaaggttttggggtaagaatgtggtgtctctctcttatttgtgtggttgatctagcctcgatgtg 52885038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 1731624 - 1731570
Alignment:
Q  73 tgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaa 127  Q
    ||||||| ||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  1731624 tgcggttattctagcctcgatgtggatggtcccccaggctcccccaatgacccaa 1731570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 3341182 - 3341296
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| |||||||||   |||||| ||||| ||||||||||||||||| ||| | ||||  || || |||| || || ||||||||| ||| |    
T  3341182 ttataagtaagaggacccataacatcattgttttaagattttgggtaagagtgtgatgtctttcttaattatgtggttattttaacctcgatgtagacgg 3341281  T
Q  102 tctcccaagctcccc 116  Q
    || ||||| ||||||    
T  3341282 tcccccaaactcccc 3341296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6975559 - 6975489
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgctt 71  Q
    ||||||||||||| ||| ||||||  |||| | ||||| |||||||||||||||||| || ||||||||||    
T  6975559 cttataagtaagaggactcataaatccattatcttaagattttgggtaagagtgtggcgtctctcttgctt 6975489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 54741281 - 54741227
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgt 55  Q
    ||||||||||||| |||||||| ||| ||||| |||||||||||| |||||||||    
T  54741281 cttataagtaagaggacccatacacagattgtcttaaggttttggataagagtgt 54741227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2740753 - 2740866
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||| |||||| ||  |  ||||||||||  |||||||||||| || |||||  ||||||  ||||||||||||||||| ||||      
T  2740753 cttataagtaagaggacctataaacccagagccttaaggttttacgtaagagtgtggcgtctctctcacttgtg--gttgttctagcctcgatatggatg 2740850  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  2740851 gtcccccgagctcccc 2740866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2741124 - 2741180
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtgg 57  Q
    ||||||||||||| |||||||||   |||||  ||||||||||||||||||||||||    
T  2741124 cttataagtaagaggacccataactccattgccttaaggttttgggtaagagtgtgg 2741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 45489402 - 45489338
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||| |||| |||||||||||| ||| ||| ||||| ||| | |||||||||||||||||||||    
T  45489402 ttaagatttttggtaagagtgtgatgtctcttttgctagtgtgattgttctagcctcgatgtgga 45489338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 11197293 - 11197344
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctct 66  Q
    ||||||||||| |||||  ||| ||||||||||||||||||||||| |||||    
T  11197293 gacccataaacccattgccttagggttttgggtaagagtgtggtgtctctct 11197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 41707565 - 41707503
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctct 66  Q
    ||||||||| |  |||||||||| |||||| |||||||||| |||||||||||||||| |||||    
T  41707565 tataagtaaaagaacccataaactcattgtcttaaggtttt-ggtaagagtgtggtgtctctct 41707503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 54017805 - 54017750
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtg 56  Q
    ||||||||||||| ||||||||  | |||||| |||||||||| ||||||||||||    
T  54017805 cttataagtaagaggacccatattcccattgtcttaaggttttaggtaagagtgtg 54017750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 3700443 - 3700516
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctccc 107  Q
    |||||||||||| ||||||| || ||| |||||   ||||| |||| ||| ||||||||||||||| |||||||    
T  3700443 ttaaggttttggataagagtatgatgtctctctcatttgtgtggttattcaagcctcgatgtggacggtctccc 3700516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 49076551 - 49076427
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||| |||||| |||||| |||| | ||||||||  || | ||||| | ||| |||| |||| ||||| ||||||||||||||||     
T  49076551 cttataagtaagaggacctataaacccattgtcttaaag-tttgggta--agggcggtgtctgtctcgcttatgcgattgttatagcctcgatgtggacg 49076455  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||  ||| |||||||||| |||||    
T  49076454 gtcccccgcgct-ccccaatgactcaaca 49076427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6876967 - 6876842
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| |||||||||||||| || |||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||     
T  6876967 cttataaataagatgacccatacactcattgtcttagggttttgggtaagagtgtggtgtttctcttgtttgtgtggttgttctagcctcgatgtggacg 6876868  T
Q  101 gtctcccaagctcccccaatgaccca 126  Q
    ||| ||| ||||||||||||||||||    
T  6876867 gtcccccgagctcccccaatgaccca 6876842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 5915928 - 5916048
Alignment:
Q  9 taagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctccca 108  Q
    ||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||     
T  5915928 taagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc-cccg 5916026  T
Q  109 agctcccccaatgacccaacaa 130  Q
    | |||||||||||| |||||||    
T  5916027 aactcccccaatgatccaacaa 5916048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 30441139 - 30441240
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| | ||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30441139 ttataagtaagagggcccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacag 30441238  T
Q  102 tc 103  Q
    ||    
T  30441239 tc 30441240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3669740 - 3669855
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||      
T  3669740 cttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggatg 3669839  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  3669840 gtccccctagctcccc 3669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9483292 - 9483194
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  9483292 cttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctcttttgctcgtgcggttgttctagcctcgatgtggac 9483194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34834929 - 34835026
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  34834929 cttataagtaagatgactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgga 34835026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 34835262 - 34835390
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||| ||||||||||||||||||||||  |||||||||||| |||| ||||||||||||||| |||     
T  34835262 cttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacg 34835361  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||  ||||||||||||||| ||||    
T  34835362 gtccccctggctcccccaatgacctaaca 34835390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 34835528 - 34835656
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||| ||||||||||||||||||||||  |||||||||||| |||| ||||||||||||||| |||     
T  34835528 cttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacg 34835627  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||  ||||||||||||||| ||||    
T  34835628 gtccccctggctcccccaatgacctaaca 34835656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 34835794 - 34835922
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||| ||||||||||||||||||||||  |||||||||||| |||| ||||||||||||||| |||     
T  34835794 cttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacg 34835893  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||  ||||||||||||||| ||||    
T  34835894 gtccccctggctcccccaatgacctaaca 34835922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3670113 - 3670227
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||| || |||||||||||  |||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  3670113 cttataagtatgaggacccataaacctatttccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacg 3670212  T
Q  101 gtctcccaagctcccc 116  Q
    || |||| ||||||||    
T  3670213 gt-tccctagctcccc 3670227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 18372099 - 18371970
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| || |||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||     
T  18372099 cttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtgtggtgtttctctcgcttgtgcggttgctctagcctcaatgtgaacg 18372000  T
Q  101 g-tctcccaagctcccccaatgacccaaca 129  Q
    | || ||| ||||||||  |||||||||||    
T  18371999 gttcccccgagctcccctcatgacccaaca 18371970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 45122677 - 45122774
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||| |||||||| || ||||||||||||| |||||||| ||||||||||||||    
T  45122677 cttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctcttgcttgtgtggttgttcaagcctcgatgtgga 45122774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 45122162 - 45122067
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    |||||||||||||  |||||||||| |||| | ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  45122162 cttataagtaagagaacccataaactcattttcttaaggttttgggtaagagtgtggtgtctctcttacttgtggggttgttctagcctcgatgtg 45122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 3038394 - 3038297
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||| | ||||||||||| |||||  ||||||||||||||||||||||||  | ||||||||||||| ||||||||||||||||||||||||    
T  3038394 ttataagtaaaaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctctcttgcttgtgtggttgttctagcctcgatgtggac 3038297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40518124 - 40518240
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||   ||||||||||| || ||  |||||||||||||||||||||||| || ||||||||||||| |||||||||||||| |||||||||     
T  40518124 cttataagtaaatggacccataaacccaatgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagccttgatgtggacg 40518223  T
Q  101 gtctcccaagctccccc 117  Q
    ||| ||| |||||||||    
T  40518224 gtcccccgagctccccc 40518240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 40579335 - 40579259
Alignment:
Q  40 ttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccc 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  40579335 ttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggactgtcccccgagctcccc 40579259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9482709 - 9482611
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  | ||| |||||  |||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  9482709 cttataagtaagaggacccataaacccattgcctaaagattttgtataagagtgtggtatctctcttgcttgtgcggttgttctagcctcgatgtggac 9482611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9608798 - 9608896
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||||||||||||||| |||    ||||||||||||||| |||||||| || ||||||||| ||| ||||||||||||||||||||||||    
T  9608798 cttataagtaagatgacccataaacccatcaccttaaggttttgggtatgagtgtggcgtctctcttgctagtgaggttgttctagcctcgatgtggac 9608896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40579611 - 40579513
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| |||||||||||  ||||  |||||||||| |||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||    
T  40579611 cttataagtaagaggacccataaacttattgctttaaggttttaggtaagagtgtggtgtctctattgcttgtacggttgttctatcctcgatgtggac 40579513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1014350 - 1014253
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||||| ||||| | ||   |||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  1014350 cttataagtaagaggacccgtaaactcgttaccttaaagttttgggtaagagtgtggtgtctctcctgcttgtgcggttgttctagcctcgatgtgga 1014253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 6651562 - 6651674
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctccc 115  Q
    |||||||||  |||||  ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||  ||| ||| | || ||    
T  6651562 acccataaattcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcgattgttctaacctcgatgtggatggtccccctaact-cc 6651660  T
Q  116 ccaatgacccaaca 129  Q
    ||||||||||||||    
T  6651661 ccaatgacccaaca 6651674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 37544594 - 37544497
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||| |||| ||||||||||  ||||   ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  37544594 ttataagaaagaggacccataaatccattactttaaggttttgggtaagagtgtggtgtctttcttacttgtgcggttgttctagcctcgatgtggac 37544497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20870678 - 20870548
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| || ||  ||||| |||||| |||||||||||||| ||||||||||||| |||||||||| ||| ||| |||||     
T  20870678 cttataagtaagaggacccataaacccactgccttaagattttggataagagtgtggtgtctctcttgcttgtgtggttgttctaaccttgatatggacg 20870579  T
Q  101 gtctcccaagctcccccaatgacccaacaag 131  Q
    |||  ||  |||||||  |||||||||||||    
T  20870578 gtcctcctggctcccctcatgacccaacaag 20870548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25561921 - 25561823
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggtttt-gggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||   | ||||||||||||| ||||| |||||||||||||||||    
T  25561921 cttataagtaagaggacccataaactcattgtcttaaggttttggggtaagagtgtgacatctctcttgcttgtgtggttgctctagcctcgatgtgga 25561823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33113472 - 33113374
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  ||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||| ||| ||| ||||    
T  33113472 cttataagtaagaggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgctagtgtggttgttctaggctcaatgcggac 33113374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 6731953 - 6732045
Alignment:
Q  6 aagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||  |||||||||  |||||  ||||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  6731953 aagtaagagaacccataaattcattgccttaaggttttgagtaagagtgtggtgtctctcttgcttatgcggttgttctaacctcgatgtgga 6732045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 9309408 - 9309535
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||| ||||| |||||  ||||||| | ||||||||||||||||| |||||   |  || ||||||||||||||||||||||||     
T  9309408 cttataagtaagaggacccttaaactcattgccttaaggtgtcgggtaagagtgtggtgtctctctcagta-tgtggttgttctagcctcgatgtggacg 9309506  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| |||||||||| ||||||||||    
T  9309507 gtcccccgagctcccccagtgacccaaca 9309535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40518635 - 40518733
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||| ||||| ||||||||||| || ||  |||||||||||||||||||||||  ||  |||||||||||| ||||||||||||||| ||||||||    
T  40518635 cttataaataagaggacccataaacccaatgacttaaggttttgggtaagagtgtgacgtcactcttgcttgtgtggttgttctagcctcaatgtggac 40518733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 147504 - 147632
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| |||||||||||  ||||  |||| ||||||||||||||||||| || ||||||||||||||||| |||||||| | |||||||       
T  147504 cttataaataagaggacccataaacctattgccttaaagttttgggtaagagtgtggcgtctctcttgcttgtgcggtagttctagcattgatgtgggtg 147603  T
Q  101 gtctccca-agctcccccaatgacccaaca 129  Q
    ||| |||| ||||||||| |||||||||||    
T  147604 gtcccccatagctccccc-atgacccaaca 147632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 30359324 - 30359421
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    |||||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||||||| |||||| ||||||  |||||| ||||||| |||||||    
T  30359324 cttataagcaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctttcttgtgatgttgttttagcctcaatgtgga 30359421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 41129067 - 41129156
Alignment:
Q  27 cattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccc 116  Q
    |||||| ||||||||||||||| ||||||||||| |||||| |||||| |||||||| | ||||||||||||| ||| |||| |||||||    
T  41129067 cattgtcttaaggttttgggtatgagtgtggtgtctctcttacttgtgtggttgttcaaacctcgatgtggacggtcccccaggctcccc 41129156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 147888 - 147968
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||  ||||  ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||    
T  147888 acccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttacttgtgcagttgttctagcctcaatgtg 147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 1013974 - 1013879
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||| |||| |||||| |||||  |||  |||||| ||||||||||| ||| ||| || ||||||||||||||||||||||||||||||    
T  1013974 tataagtaagaggaccaataaacccattgccttagagttttgagtaagagtgtgttgtctcttttacttgtgcggttgttctagcctcgatgtgga 1013879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 70379 - 70273
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| || ||  |||||||||| ||||||||||||  || | ||||||||||| |||||||||| |||| ||| ||||     
T  70379 cttataagtaagaggacccataaacccactgccttaaggttttaggtaagagtgtgacgtctatcttgcttgtgtggttgttctaacctcaatgcggacg 70280  T
Q  101 gtctccc 107  Q
    |||||||    
T  70279 gtctccc 70273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 8919216 - 8919142
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctccca 108  Q
    |||||||||||| |||||||||||||| ||| ||||||||| |||||||||||| ||||||||||| ||| ||||    
T  8919216 ttaaggttttggataagagtgtggtgtctcttttgcttgtgtggttgttctagcttcgatgtggacggtccccca 8919142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 9309033 - 9309160
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagt---gtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    |||||||||||| ||||||||||| |||||  | ||||||||||| ||||||   ||||||| |||||  ||  || |||||||||||||||||||||||    
T  9309033 ttataagtaagaggacccataaacccattgcctaaaggttttgggcaagagtagtgtggtgtctctctcacta-tgtggttgttctagcctcgatgtgga 9309131  T
Q  99 cagtctcccaagctcccccaatgacccaa 127  Q
    | ||| ||| |||||||||| ||||||||    
T  9309132 cggtcccccgagctcccccagtgacccaa 9309160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 18371761 - 18371668
Alignment:
Q  5 taagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||| ||||||||||| ||| |  ||||||||||||||||||||||||||| |||||   ||||||||||| |||||| |||||||||||    
T  18371761 taagtaagaagacccataaacccat-gccttaaggttttgggtaagagtgtggtgtgtctctcatttgtgcggttgctctagcttcgatgtggac 18371668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30359662 - 30359760
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||| ||||||| |||    ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||| | |||||||||||    
T  30359662 cttataagtaagaggactcataaacccataaccttaagattttgggtaagagtgtggtgtctctcttacttatgcggttgttctaacttcgatgtggac 30359760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45121761 - 45121655
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| || ||||||||  |  |  ||||||||||| ||||||||||| | | |||||| ||| || |||||||||||||||||||||||||    
T  45121761 cttataagtaagaggatccataaacctacagccttaaggttttgagtaagagtgtgatatctctcttacttatggggttgttctagcctcgatgtggaca 45121662  T
Q  101 gtctccc 107  Q
    |||||||    
T  45121661 gtctccc 45121655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 8918868 - 8918771
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||| |||||||||||  ||||  |||||||||||||||||||||||  || | |||||| |||| ||||||| || |||||||||||||    
T  8918868 ttataagtaagaggacccataaacctattgacttaaggttttgggtaagagtgtgacgtctttcttgcgtgtgtggttgttttaacctcgatgtggac 8918771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 45123061 - 45123157
Alignment:
Q  5 taagtaagatgacccataaacacattgtgttaaggttttgggta--agagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||||||||||||  ||| | |||||||||||||||  |||||||||||| ||||||  ||||| ||||||||||  ||||||||||||    
T  45123061 taagtaagatgacccataaacctattttcttaaggttttgggtaagagagtgtggtgtctctcttatttgtggggttgttctaatctcgatgtggac 45123157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 9609138 - 9609222
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttcta 85  Q
    ||||||||||||||||||||||||| ||| |  |||| ||||| ||||||||||||| || ||||||||| ||| ||||||||||    
T  9609138 cttataagtaagatgacccataaacccatcgccttaatgttttcggtaagagtgtggcgtctctcttgctagtgtggttgttcta 9609222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 32640630 - 32640542
Alignment:
Q  8 gtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    |||||| |||| |||||| |||||  |||||||||||||||||||||| | || |||||||||| || | |||||||||||||||||||    
T  32640630 gtaagaggaccgataaacccattgccttaaggttttgggtaagagtgttgcgtctctcttgcttttgtgattgttctagcctcgatgtg 32640542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1514020 - 1513913
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||| ||||| |||    |||||||||||||||| |||||||| | |||||| | |||| |||| |||||||||||||||||||     
T  1514020 cttataagtaagaggacccttaaacccataaccttaaggttttgggtaaaagtgtggtatctctcttacatgtggggttattctagcctcgatgtggacg 1513921  T
Q  101 gtctccca 108  Q
    ||| ||||    
T  1513920 gtccccca 1513913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 43274699 - 43274612
Alignment:
Q  42 ttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||||| ||||||||||| |||||| ||| || |||||||| ||||||||||||||| ||| ||| ||||||| || ||||||||||    
T  43274699 ttgggtatgagtgtggtgtctctcttacttatggggttgttccagcctcgatgtggacggtcccccgagctcccacagtgacccaaca 43274612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 45122014 - 45121900
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||| ||||||| |||||  ||||| |||||||||| ||||||| || ||| ||||| ||| |||| ||| ||||||||||||||  |    
T  45122014 ttataagtaagaggactcataaactcattgccttaagattttgggtaacagtgtggcgtctcttttgctcgtgtggttattcaagcctcgatgtggaagg 45121915  T
Q  102 tctcccaagctcccc 116  Q
    || |||| |||||||    
T  45121914 tcccccaggctcccc 45121900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 5420704 - 5420832
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  ||||||||||  |||||||||||  || || ||  |||||| |||||||| |||||||||||||||     
T  5420704 cttataagtaagaggactcataaacccattgccttaaggttttttgtaagagtgtgacgtctccctcacttgtgtggttgttcaagcctcgatgtggacc 5420803  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    |||  |  | |||||||| ||||||||||    
T  5420804 gtccgcggaactcccccactgacccaaca 5420832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 41972255 - 41972341
Alignment:
Q  42 ttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    |||||||||||||||| ||  |||||||||||| |||||||| |||||| || ||||| ||||||| | ||||||| |||||||||||    
T  41972255 ttgggtaagagtgtggcgtcactcttgcttgtgtggttgttccagcctcaatatggacggtctcccgaactccccc-atgacccaaca 41972341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9507835 - 9507933
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||| ||||||| ||||   |||||||||||||||||||||||| || ||| |  ||| |  |||||||| |||||||||||||||    
T  9507835 cttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctctatctcttatatggttgttcaagcctcgatgtggac 9507933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 18380089 - 18380022
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtc 103  Q
    ||||||||||| ||||||||||||||   |||||||||||||| || ||||||| |||||||||||||||    
T  18380089 ttaaggttttgagtaagagtgtggtgc--ctcttgcttgtgcgattcttctagcttcgatgtggacagtc 18380022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 43274883 - 43274825
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgt 60  Q
    |||||||||||| |||||||||||  ||||| ||||||||||| |||||||||||||||    
T  43274883 ttataagtaagaggacccataaacctattgtcttaaggttttgagtaagagtgtggtgt 43274825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12283926 - 12284021
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    |||| |||||| ||||| ||||||| ||  || |||||||||||| ||||||||| |||| |||||  |||||| ||||||||||||||| ||||||    
T  12283926 cttaaaagtaaaatgacacataaactcaa-gtcttaaggttttggataagagtgtagtgtctctctcacttgtgtggttgttctagcctctatgtgg 12284021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 3038006 - 3037958
Alignment:
Q  69 cttgtgcggttgttctagcctcgatgtggacagtctcccaagctccccc 117  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  3038006 cttgtgtggttgttctagcctcgatgtggacggtcccccgagctccccc 3037958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 16524451 - 16524503
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctag 86  Q
    ||||||||||| ||||||||||||||| |||||| |||||| ||||| |||||    
T  16524451 ttaaggttttgagtaagagtgtggtgtctctcttacttgtgtggttgctctag 16524503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 18372342 - 18372262
Alignment:
Q  48 aagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag-tctcccaagctcccccaatgacccaa 127  Q
    ||||||||||||| ||||| ||||||||||||| | ||| |||||||||||| | || ||| ||||||||  |||||||||    
T  18372342 aagagtgtggtgtctctctcgcttgtgcggttgctttagtctcgatgtggacggttcccccgagctcccctcatgacccaa 18372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 12156745 - 12156702
Alignment:
Q  19 cataaacacattgtgttaaggttttgggtaagagtgtggtgttt 62  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||    
T  12156745 cataaacccattgtcttaaggttttgggtaagagtgtgatgttt 12156702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32305530 - 32305628
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| |||| |||||| ||||   ||||| |||||| ||||||||||| || | | || ||| ||| ||||||||| ||| |||||||||    
T  32305530 cttataagtaagaagacctataaacccattaccttaagattttggataagagtgtggcgtctttattacttatgcagttgttctaaccttgatgtggac 32305628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 43398159 - 43398077
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||  |||||  |||| ||||||| ||||| ||||| |||||| || || ||||||||| |||| |||||||||||    
T  43398159 gacccataaattcattgccttaaagttttggataagaatgtggcgtttcttttactagtgcggttgctctaacctcgatgtgg 43398077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 4e-40; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 34753130 - 34753003
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||  ||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||     
T  34753130 cttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacg 34753031  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    || |||||||||||||| |||||||||||    
T  34753030 gtttcccaagctccccc-atgacccaaca 34753003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 40296420 - 40296291
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  40296420 cttataagtaagaggacccataaacccattgccttgaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacg 40296321  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    ||| |||| ||  |||  ||||||||||||    
T  40296320 gtcccccaggcctccctcatgacccaacaa 40296291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6500503 - 6500618
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||  ||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  6500503 cttataagtaagaggacctttaaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacg 6500602  T
Q  101 gtctcccaagctcccc 116  Q
    ||| |||| |||||||    
T  6500603 gtcccccaggctcccc 6500618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 32487448 - 32487573
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagt 102  Q
    ||||||||||| ||||||||||| |||||  |||||||||||||||||||||||  || |||||||||| || |||||||||||||||||||||||  ||    
T  32487448 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgacgtatctcttgcttatgtggttgttctagcctcgatgtggatggt 32487547  T
Q  103 ctcccaagctcccccaatgacccaac 128  Q
    | |||||||| |||| ||||||||||    
T  32487548 cccccaagcttcccccatgacccaac 32487573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 41170687 - 41170777
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcg 91  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  41170687 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgcttgtgtggttgttctagcctcg 41170777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15370152 - 15370269
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||  ||  |  ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||     
T  15370152 cttataagtaagaggacccataaatccacagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgggattgttctagcctcgatgtggacg 15370251  T
Q  101 gtctcccaagctccccca 118  Q
    ||| ||| ||||||||||    
T  15370252 gtcccccgagctccccca 15370269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 26900090 - 26899994
Alignment:
Q  33 gttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaacaa 130  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||    
T  26900090 gttaaggttttgggtaagagtgtggtgtctctcttgcttgtgggtttgttctagccttgatgtggacggtcccccaagctccccc-atgacccaacaa 26899994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 27502141 - 27502012
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||  ||||  ||||| |||| ||||| |||||||||| ||||||||||||| |||||||||| |||||||||||||     
T  27502141 cttataagtaagaggacccataaacctattgccttaagatttttggtaaaagtgtggtgtctctcttgcttgtgtggttgttctatcctcgatgtggacg 27502042  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    ||| ||| ||||||||  ||||||||||||    
T  27502041 gtccccctagctcccctcatgacccaacaa 27502012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 624250 - 624378
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||||||||||||||| ||| |  || |||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||||||| |    
T  624250 ttataagtaagatgacccataaacccatagccttgaggttttgggtaagagtgtggtgtctctctcacttgtggggttgttctagcctcgatgtggacgg 624349  T
Q  102 tctcccaagctccccc-aatgacccaaca 129  Q
    |  ||| ||||||||| | ||||||||||    
T  624350 ttccccgagctccccctagtgacccaaca 624378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3295120 - 3295005
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  || |||||||||||| ||||||||||| ||||||| ||||| ||||||| |||||||||||||||||    
T  3295120 cttataagtaagaagacccataaacccattgccttgaggttttgggtatgagtgtggtgtctctcttggttgtgtggttgttgtagcctcgatgtggaca 3295021  T
Q  101 gtctcccaagctcccc 116  Q
    ||| |||  |||||||    
T  3295020 gtccccctcgctcccc 3295005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6500875 - 6500990
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||| | ||||||||||| |||||  |||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||||     
T  6500875 cttataaataaaaggacccataaactcattgccttaaggttttggataagagtgtggtgtctctcttacttgtgcggttattctagcctcgatgtggacg 6500974  T
Q  101 gtctcccaagctcccc 116  Q
    ||| |||| |||||||    
T  6500975 gtcccccaggctcccc 6500990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 41632835 - 41632942
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| || ||  ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||     
T  41632835 cttataagtaagaggacccataaacccaatgctttaagattttgggtaagagtgtggtgtctctcttgcttgtgcggttgttttagtctcgatgtggacg 41632934  T
Q  101 gtctccca 108  Q
    ||| ||||    
T  41632935 gtccccca 41632942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 299542 - 299644
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||||||||||||||| ||| |  ||||||||||| |||||||||||| || ||| |||||||| ||||||||||||| ||||||||||||    
T  299542 cttataagtaagatgacccataaactcatagccttaaggttttgtgtaagagtgtggcgtctctattgcttgtacggttgttctagcatcgatgtggaca 299641  T
Q  101 gtc 103  Q
    |||    
T  299642 gtc 299644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18603225 - 18603127
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||  | ||||||||||||| ||| ||||||||||||||||||||    
T  18603225 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctctcttgcttgtgtggtagttctagcctcgatgtggac 18603127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36492322 - 36492224
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| |||| |||||||||||   || ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  36492322 cttataagtaagaggaccaataaacacattacctttaggttttggataagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggac 36492224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 42405668 - 42405573
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagct-cccccaatgacccaacaa 130  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||| |||||||||||    
T  42405668 ttaaggttttgggtaagagtgtggtgt--ctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctccccccagtgacccaacaa 42405573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 25327988 - 25328117
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||  | ||  ||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||| ||||||||     
T  25327988 cttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgtggttgttctagcctcaatgtggacg 25328087  T
Q  101 gtctcccaagctcccc-caatgacccaaca 129  Q
    ||| ||| |||||||| || ||||||||||    
T  25328088 gtcccccgagctcccctcagtgacccaaca 25328117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 15370455 - 15370583
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| ||| |  ||||||||||| |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||     
T  15370455 cttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctcttgtttgtggggttgttctagcctcgatgtggacg 15370554  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    |||  ||| |||||||  ||| |||||||    
T  15370555 gtcctccatgctcccctcatgtcccaaca 15370583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13415865 - 13415774
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcga 92  Q
    ||||||||||||| |||||||||||  |||   |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  13415865 cttataagtaagaggacccataaacctattaccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcga 13415774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3295449 - 3295352
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| |||||||||||  ||||  |||||||||||| |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  3295449 cttataagtaagaggacccataaaccaattgccttaaggttttgg-taagagtgtgttgtctctcttgcttgtgtggttgttctagcctcgatgtggac 3295352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 1028621 - 1028493
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| |||||||||||  ||    |||||||||| ||||||||||||| || |||||  ||||||||||||||||||||||||||||||| |    
T  1028621 ttataagtaagaggacccataaacctataaccttaaggtttttggtaagagtgtggcgtctctctcacttgtgcggttgttctagcctcgatgtggacgg 1028522  T
Q  102 tctcccaagctcccc-caatgacccaaca 129  Q
    || ||| |||||||| || ||||||||||    
T  1028521 tccccctagctcccctcagtgacccaaca 1028493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36568672 - 36568544
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||| ||||||||| ||||| |||||  |||||||||| ||||||||||||| || |||||  |||||| |||||||||| ||||||||||||      
T  36568672 cttataagtgagatgacccgtaaacccattgccttaaggtttttggtaagagtgtggcgtctctct--cttgtgtggttgttctatcctcgatgtggaag 36568575  T
Q  101 gtctcccaagctcccc-caatgacccaacaa 130  Q
    ||| ||| |||||||| ||||||||||||||    
T  36568574 gtcccccgagctcccctcaatgacccaacaa 36568544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 33747825 - 33747922
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||| || |||||||| |||||  ||||| |||||| |||||||||||||| |||||| ||| ||||||||||||||||| |||||||||    
T  33747825 ttataagtaagaggatccataaactcattgccttaagattttggataagagtgtggtgtctctcttccttatgcggttgttctagccttgatgtggac 33747922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26074665 - 26074761
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||||  || ||| ||||| |||| |||||||||||    
T  26074665 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgctctaacctcgatgtgg 26074761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6224249 - 6224364
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| ||| |  |||||||||| |||||||||||||||  ||  ||||||||||||||| ||||||||| || |||||     
T  6224249 cttataagtaagaggacccataaactcatcgccttaaggtttttggtaagagtgtggtgcctcagttgcttgtgcggttggtctagcctcaatatggacg 6224348  T
Q  101 gtctcccaagctcccc 116  Q
    ||| |||| |||||||    
T  6224349 gtcccccaggctcccc 6224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 12662756 - 12662661
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||  |||||||||  |||||| ||||| ||||||||||||||||||||  | ||||||||||| |||| |||||||||||||||||    
T  12662756 ttataagtaagaaaacccataaatccattgtcttaagtttttgggtaagagtgtggtgcctttcttgcttgtggggttcttctagcctcgatgtgg 12662661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 35150060 - 35150185
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||  |||||| |||||||||||||||| |||||||||| |||||  || ||| |||||||||| |||| ||||||||     
T  35150060 cttataagtaaga-gacccataaatccattgtcttaaggttttgggtaaaagtgtggtgtctctctcactagtgtggttgttctaacctcaatgtggacc 35150158  T
Q  101 gtctcccaagctcccccaatgacccaac 128  Q
    ||| |||  |||||||| ||||||||||    
T  35150159 gtc-cccttgctccccccatgacccaac 35150185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11417082 - 11416985
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| || |||||||| |||||  ||||||||||| ||||||||||| | | ||||||||||||| | |||||||||| ||||||||||    
T  11417082 cttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagtgtgatctctctcttgcttgtgggattgttctagcttcgatgtgga 11416985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9498759 - 9498645
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  ||||| ||||||||||||||||||||| ||||||| || ||  | || ||||||||| ||||||||     
T  9498759 cttataagtaagaggacccataaacccattgccttaagattttgggtaagagtgtggtgtctctcttgtttatg-tgctggtctagcctcaatgtggacg 9498661  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  9498660 gtccccctagctcccc 9498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26075267 - 26075168
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggt-aagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||| |||||||||  || ||||||||  ||| ||||||| ||||||||||||||||    
T  26075267 cttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtgtcgtctctcttgcaagtgtggttgttttagcctcgatgtggac 26075168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 29549358 - 29549278
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttc 83  Q
    ||||||||||| ||||||||||||||||   |||||||||||| ||||||||||| || |||||||||| || ||||||||    
T  29549358 tataagtaagaagacccataaacacattaccttaaggttttggataagagtgtggcgtctctcttgcttatgtggttgttc 29549278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 38427306 - 38427366
Alignment:
Q  35 taaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgt 95  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  38427306 taagattttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctaacctcgatgt 38427366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 795304 - 795254
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttct 84  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  795304 ttaaggttttaggtaagagtgtggtgtctctcttgcttgtgcggttgttct 795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 24489296 - 24489215
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    |||||||||| |||||  ||||| ||||| |||||||||||| || ||| || |||||||||||||||||| ||||||||||    
T  24489296 acccataaacccattgccttaagattttgcgtaagagtgtggcgtctcttttacttgtgcggttgttctagtctcgatgtgg 24489215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 26074244 - 26074155
Alignment:
Q  8 gtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    |||||| ||||||| ||| |||||  ||||||||||||||||||||||||||| |||||  || ||| ||||| |||| |||||||||||    
T  26074244 gtaagaggacccatgaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgctctaacctcgatgtgg 26074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38427601 - 38427697
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    |||||||||| || ||||||| ||  |||||| ||||||||||| |||||||||||  || |||||  ||||||||||||||||| ||||||||||||    
T  38427601 cttataagta-gaggacccattaatccattgtcttaaggttttgtgtaagagtgtgacgtctctctcacttgtgcggttgttctaacctcgatgtgga 38427697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 623904 - 623984
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcc 114  Q
    ||||||||||| ||||||||||||||| |||||  |||||| ||||||||||||||| |||| ||| ||| ||| ||||||    
T  623904 ttaaggttttgagtaagagtgtggtgtctctctcacttgtggggttgttctagcctcaatgtagacggtcccccgagctcc 623984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 36522341 - 36522266
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcgg 77  Q
    |||||||| ||| |||| |||||| |||| | ||||||||||||||||||||||||||| |||||  |||||||||    
T  36522341 ttataagtgagaggaccaataaacccattatcttaaggttttgggtaagagtgtggtgtctctctcacttgtgcgg 36522266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 5723869 - 5723811
Alignment:
Q  28 attgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctag 86  Q
    ||||| ||||||||||||| |||||| | |||| |||||||||||||||||||||||||    
T  5723869 attgtcttaaggttttgggaaagagtatagtgtctctcttgcttgtgcggttgttctag 5723811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 26591015 - 26590918
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| || |||||||  || ||  ||||||||||| |||||||||||| || |||||  || ||| |||||||||| ||||||||||||    
T  26591015 cttataagtaagaggatccataaattcaatgccttaaggttttgagtaagagtgtggcgtctctctcactagtgtggttgttctaacctcgatgtgga 26590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 301037 - 301132
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||| |||| |||||||||||||||| ||||||||||||| || ||||| || ||||| ||| || |||  || | |||||| ||||||||||||    
T  301037 ttaagatttttggtaagagtgtggtgtctctcttgcttgtgtggctgttcaagtctcgacgtgaacggtcctccgaactcccctaatgacccaaca 301132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 13112604 - 13112649
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgt 60  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||    
T  13112604 gacccataaacccattgtcttaaggttttggataagagtgtggtgt 13112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 24489583 - 24489664
Alignment:
Q  50 gagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagct-cccccaatgacccaacaa 130  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||| || || || |||| | || |||||| |||||||||||    
T  24489583 gagtgtggtgtctctcttgcttgtgcagttgttctaacctcgatatgaacggtttcccgaactccccccagtgacccaacaa 24489664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 35167943 - 35167814
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||| |||||||||||||   ||||  || | ||||| |||||||||||| ||| ||||   || ||| |||||||||||| |||||||||||     
T  35167943 cttataagtaggatgacccataaatctattgccttgatgtttttggtaagagtgtgatgtctctcacactagtgtggttgttctagcatcgatgtggact 35167844  T
Q  101 gtctcccaagctcc-cccaatgacccaaca 129  Q
    ||| ||| | |||| || ||||||||||||    
T  35167843 gtccccctaactcctcctaatgacccaaca 35167814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 2411064 - 2411175
Alignment:
Q  5 taagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtct 104  Q
    |||||||||  ||||||||||  ||||  ||||||||||| |||||||||| || | ||| || ||||   | |||||||| ||||||| ||||| |||     
T  2411064 taagtaagagaacccataaacttattgccttaaggttttgagtaagagtgtagtttctctattacttgaatgattgttctaacctcgatatggacggtcc 2411163  T
Q  105 cccaagctcccc 116  Q
    ||||||||||||    
T  2411164 cccaagctcccc 2411175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 13042606 - 13042657
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctct 66  Q
    ||||||||||| |||||  |||||||||||| |||||||||||||| |||||    
T  13042606 gacccataaacccattgccttaaggttttggataagagtgtggtgtctctct 13042657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 26074885 - 26074818
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggt-aagagtgtggtgtttctcttgc 69  Q
    |||||||| || |||||||||||  ||||| |||||||||||||| |||||||||| || ||||||||    
T  26074885 tataagtaggaggacccataaacctattgtcttaaggttttgggtaaagagtgtggcgtctctcttgc 26074818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 13785704 - 13785639
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||  |||| |||||||||||||||| | ||||  |||||||||| | |||||||||||    
T  13785704 ttaaggttttaagtaaaagtgtggtgtttctctcgtttgtatggttgttctaacttcgatgtggac 13785639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 4e-40; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22304622 - 22304738
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  22304622 cttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagtctcgatgtggaca 22304721  T
Q  101 gtctcccaagctccccc 117  Q
    ||| ||| |||| ||||    
T  22304722 gtccccctagcttcccc 22304738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29645007 - 29644892
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||| || |||||||||| |||||||||| ||||||||||||||||     
T  29645007 cttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctctcttgcttatgcggttgttttagcctcgatgtggacg 29644908  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||||||||||||    
T  29644907 gtcccccaagctcccc 29644892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32463005 - 32462890
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||     
T  32463005 cttataagtaagaagactcataaacccattgccttaaggttttgagtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgtacg 32462906  T
Q  101 gtctcccaagctcccc 116  Q
    |||| |||||||||||    
T  32462905 gtcttccaagctcccc 32462890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 37990744 - 37990614
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||     
T  37990744 cttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtgattgttctagcctcgatgtggacg 37990645  T
Q  101 gtctcccaagctc-ccccaatgacccaacaa 130  Q
    ||| ||| ||||| || ||||||||||||||    
T  37990644 gtcccccgagctctcctcaatgacccaacaa 37990614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 35946575 - 35946704
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| | |||  |||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||     
T  35946575 cttataagtaagaggacccataaacccgttgccttaaggttttgggtaaaagtgtggtgtctctcttgcttgtgcaattgttctagcctcgatgtggacg 35946674  T
Q  101 gtctccc-aagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||||| ||||||||||    
T  35946675 gtcccccaaagctcccccagtgacccaaca 35946704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12114667 - 12114571
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  12114667 cttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgcggttgttctagccacgatgtgg 12114571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43346896 - 43346780
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||||  |||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||     
T  43346896 cttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctctatgtggacg 43346797  T
Q  101 gt-ctcccaagctcccc 116  Q
    || |||| |||||||||    
T  43346796 gtcctccgaagctcccc 43346780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 22303759 - 22303653
Alignment:
Q  6 aagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctc 105  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||    
T  22303759 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttctcttacttgtgcgattgttctagcctcgatgtagacggtctc 22303660  T
Q  106 ccaagct 112  Q
    || ||||    
T  22303659 cctagct 22303653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42342195 - 42342097
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||| ||||||| |||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  42342195 cttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggac 42342097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 52634729 - 52634856
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||||||||||  || |||||||||||||| ||||||||||||| ||||| |||     
T  52634729 cttataagtaaga-gacccataaacccattgccttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcagttgttctagccttgatgtagact 52634827  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| |||||||||| ||||||||||    
T  52634828 gtcccccgagctcccccagtgacccaaca 52634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42342493 - 42342378
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||  |||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||| ||||||||     
T  42342493 cttataagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcggttgttctagcctcaatgtggacg 42342394  T
Q  101 gtctcccaagctcccc 116  Q
    ||| |||  |||||||    
T  42342393 gtccccctggctcccc 42342378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15772907 - 15773005
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  15772907 cttataagtaagaggacccataaactcattgctttaaggttttggataagagtgtggtgtctctcttgcttgtgtggttgttctaacctcgatgtggac 15773005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22304060 - 22303931
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||  ||||||||||| |||||  |||||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||||      
T  22304060 cttataagtaagcggacccataaacccattgccttaaggttttggataagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggatt 22303961  T
Q  101 gtctcccaa-gctcccccaatgacccaaca 129  Q
    ||| ||||| ||||||||| ||||| ||||    
T  22303960 gtcccccaaggctcccccagtgacctaaca 22303931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 29644686 - 29644557
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||||  |||||||||| |||||| |||||||||||||||||||||||| || |||||||||| |||||||||| |||| ||||||||||      
T  29644686 cttataagtaagagaacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctctcttgcttatgcggttgttttagcttcgatgtggatg 29644587  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    ||| ||||| ||||||   |||||||||||    
T  29644586 gtcccccaaactcccctcgtgacccaacaa 29644557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 37991082 - 37990953
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||| |||||| ||| |  ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||     
T  37991082 cttataagtaagaggacctataaactcatcgccttaaggttttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagcctcgatgtggacg 37990983  T
Q  101 gtctcccaagctccccc-aatgacccaaca 129  Q
    ||| | || ||||||||  |||||||||||    
T  37990982 gtccctcaggctccccctcatgacccaaca 37990953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 41359870 - 41359743
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||||| ||||| || ||||| ||||||| |||||||||||||||||||||| |     
T  41359870 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctctcgcttgtgtggttgttctagcctcgatgtgggcg 41359771  T
Q  101 gt-ctcccaagctcccccaatgacccaa 127  Q
    || | ||| |||||||||| ||||||||    
T  41359770 gtccccccgagctcccccagtgacccaa 41359743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32589756 - 32589854
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||| | ||| ||||||||||||| ||||||||||| ||||||||||||    
T  32589756 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcttgcttgtgtggttgttctaggctcgatgtggac 32589854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 25739528 - 25739421
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagt 102  Q
    ||||||||||| ||||||||||| |||||  || ||||||||||||||||||||  || ||||| ||||||||||| |||||||||||||||||||| ||    
T  25739528 tataagtaagaggacccataaactcattgcttttaggttttgggtaagagtgtgacgtctctctagcttgtgcggtagttctagcctcgatgtggacggt 25739429  T
Q  103 ctcccaag 110  Q
    | ||||||    
T  25739428 cccccaag 25739421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 45395757 - 45395650
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| || |||||||| |||||| |||| |||||||||||||||||||||| |||||  |||||| ||||| |||||||||||||||||  |    
T  45395757 ttataagtaagaggatccataaacccattgtcttaatgttttgggtaagagtgtggtgtctctctcacttgtggggttgctctagcctcgatgtggaggg 45395658  T
Q  102 tctcccaa 109  Q
    ||||||||    
T  45395657 tctcccaa 45395650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39935060 - 39934963
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| || |||||||| |||||  |||| |||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  39935060 cttataagtaagaggatccataaacccattgccttaaagttttgagtaagagtgtgatgtctctcttgcttgtgtggttgttctagcctcgatgtgga 39934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 33803355 - 33803243
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagt 102  Q
    ||||||||||| ||||||||||| |||||  ||||||| |||||||||||||||| || || ||  |||||| |||||||||||||||||||||||| ||    
T  33803355 tataagtaagaggacccataaacccattgcattaaggtattgggtaagagtgtggcgtctccctctcttgtgtggttgttctagcctcgatgtggacggt 33803256  T
Q  103 ctcccaagctccc 115  Q
    | ||||| |||||    
T  33803255 cccccaaactccc 33803243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 54017921 - 54017793
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| |||||||  |  |  ||||||||||||||||||||||||||| |||||| |||||| |||||||||||| ||||||||| |     
T  54017921 cttataagtaagaggactcataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcttacttgtgtggttgttctagcttcgatgtgggcg 54017822  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||  ||||||||| ||||||||||    
T  54017821 gtccccctggctcccccagtgacccaaca 54017793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 54018303 - 54018207
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| |||||||||||  |  |  ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  54018303 cttataagtaagaggacccataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcatgcttgtgtggttgttctagcctcgatgtgg 54018207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 3135543 - 3135461
Alignment:
Q  17 cccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||| |||||  |||||||||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  3135543 cccataaacccattgccttaaggttttagataagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggac 3135461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25755447 - 25755544
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||| ||||||  ||||||  ||| ||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  25755447 cttataagtaagaggactcataaatccattgtcctaaagttgtgggtaaaagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtgga 25755544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 39389131 - 39389219
Alignment:
Q  9 taagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||| |||||  |||||||||||| |||||||    
T  39389131 taagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctcttttgcctgtgcaattgttctagccttgatgtgg 39389219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21832448 - 21832348
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| ||| |  |||||||||||||||||||||  | || ||||||||||||  |||||||||||||||||||||||||    
T  21832448 cttataagtaagaggactcataaactcatagccttaaggttttgggtaagagtg--gcgtctctcttgcttgtctggttgttctagcctcgatgtggaca 21832351  T
Q  101 gtc 103  Q
    |||    
T  21832350 gtc 21832348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 41359563 - 41359489
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctccca 108  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||||||| ||| ||||    
T  41359563 ttaaggttttgggtaagagtgtggcgtctcttttgcttgtgcggttgttctagcctcaatgtggacggtccccca 41359489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 31190095 - 31190160
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||| |||||    
T  31190095 ttaaggttttgggtaagagtgtggtgtctctcttgcttgtcgggttgttctagcctcgatttggac 31190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 1634418 - 1634305
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||||||||||| |||||  ||||||||||||||||||||| ||| | |||||  | | |  |||||||||||||||||||||||| |    
T  1634418 ttataagtaagaggacccataaacccattggcttaaggttttgggtaagagtgcggtatctctctcac-tatatggttgttctagcctcgatgtggacgg 1634320  T
Q  102 tctcccaagctcccc 116  Q
    || ||| ||||||||    
T  1634319 tccccctagctcccc 1634305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 32462663 - 32462569
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgt 95  Q
    |||||||||||||||| ||||||||  ||||  |||||||||||| ||||||||||| || ||||||| ||||| | ||||| ||||||||||||    
T  32462663 cttataagtaagatgatccataaacctattgctttaaggttttggataagagtgtggggtctctcttgtttgtgggattgttttagcctcgatgt 32462569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 49336792 - 49336694
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctc-ttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||||||||||| ||| || |||| ||| |||||||||||||||||| |||| ||  |||||||||||||||| |||| |||||||    
T  49336792 cttataagtaagaggacccataaacccatagtcttaaagttctgggtaagagtgtggtgtctctctttttttgtgcggttgttctatcctcaatgtgga 49336694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15773245 - 15773345
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttct--cttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||| ||||| | |||||  |||| |||||||||||||||||| ||| |||  |||||||||| |||||||||| ||||||||||||    
T  15773245 cttataagtaagaggactcataagctcattgccttaaagttttgggtaagagtgtgatgtctcttgcttgcttgtgtggttgttctaacctcgatgtgga 15773344  T
Q  99 c 99  Q
    |    
T  15773345 c 15773345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4823708 - 4823796
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcct 89  Q
    |||||||||| || ||||||||||| |||||  ||||| ||||||||||||||||||||| | | |||||| ||||| |||||||||||    
T  4823708 cttataagtaggaggacccataaactcattgccttaagattttgggtaagagtgtggtgtcttttttgcttatgcggatgttctagcct 4823796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 53577434 - 53577514
Alignment:
Q  18 ccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||| ||||  ||||||| ||||||||||||||||||| ||||||||  ||| |||||||||||||||| ||||||    
T  53577434 ccataaacatattgccttaaggtcttgggtaagagtgtggtgtctctcttgcaagtgtggttgttctagcctcggtgtgga 53577514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 44160649 - 44160544
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| || |||||||| |||||| |||||||||||| ||||| ||||| || |||||| ||||  || ||||||||||||||||||||||     
T  44160649 cttataaataagaggatccataaacccattgtcttaaggttttgg-taagaatgtggcgtctctcttacttg--cgattgttctagcctcgatgtggacg 44160553  T
Q  101 gtctcccaa 109  Q
    ||| |||||    
T  44160552 gtcccccaa 44160544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 22304302 - 22304362
Alignment:
Q  57 gtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctccccc 117  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||    
T  22304302 gtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccctagcttcccc 22304362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39914305 - 39914405
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| |||||||||||  | ||  ||||  |||||| |||||||||||||| |||||  ||| ||||||||||||||||||||||| ||||    
T  39914305 cttataaataagaggacccataaacctaatgccttaatattttggataagagtgtggtgtctctctcacttatgcggttgttctagcctcgatgtagaca 39914404  T
Q  101 g 101  Q
    |    
T  39914405 g 39914405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3135178 - 3135099
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttg 80  Q
    ||||||||||| |  |||||||||| || ||   |||||||||| ||||||||||||||| |||||||||||||||||||    
T  3135178 cttataagtaaaagaacccataaacccactgccataaggttttgagtaagagtgtggtgtctctcttgcttgtgcggttg 3135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 11662044 - 11662134
Alignment:
Q  40 ttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaacaag 131  Q
    ||||||||||||||| ||||| |||||   ||||| ||||||||||||||||||||| |||||| | | |||||| |||| |||||||||||    
T  11662044 ttttgggtaagagtgaggtgtctctctca-ttgtgtggttgttctagcctcgatgtgaacagtcccacgagctcctccaacgacccaacaag 11662134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45901767 - 45901865
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||| ||||||| ||| |  |||| ||||| |||||||||||||||| |||||| ||| |  |||||||||| | |||||||||||    
T  45901767 cttataagtaagaggacgcataaactcatggccttaaagtttttggtaagagtgtggtgtctctcttacttatagggttgttctaacttcgatgtggac 45901865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 50612519 - 50612454
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||||||||||||| ||| ||||||||||| | |||||||| | |||||| ||||||    
T  50612519 ttaaggttttgggtaagagtgtgatgtctctcttgcttgagtggttgttccatcctcgacgtggac 50612454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 54017636 - 54017524
Alignment:
Q  18 ccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccc- 116  Q
    |||||||| |||||  ||||||||||||||||||||||||||| ||| || ||| || | ||||| | |||||||||||| | ||| ||| | ||||||     
T  54017636 ccataaacccattgccttaaggttttgggtaagagtgtggtgtctctattacttatgtgattgttttggcctcgatgtggtcggtccccctaactcccct 54017537  T
Q  117 caatgacccaaca 129  Q
    | |||||||||||    
T  54017536 ctatgacccaaca 54017524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 8328374 - 8328421
Alignment:
Q  52 gtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  8328374 gtgtggtgtctctcttgcttgtggggttgttttagcctcgatgtggac 8328421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9240202 - 9240301
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||  ||||   ||||| ||| || ||||| |||||||| |||||   | |||||||| ||||||||||||||||||||    
T  9240202 cttataagtaagaggacccataaatccattaccttaagatttcggataagaatgtggtgtctctctcaatagtgcggttattctagcctcgatgtggaca 9240301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42584927 - 42584831
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| || ||||||||  ||||| ||||| ||||| | ||||||||||||  |||||| ||| ||||||||||||||  || ||||||||    
T  42584927 cttataagtaagaggatccataaaccaattgtcttaagattttgagaaagagtgtggtg--tctcttacttatgcggttgttctagtttcaatgtggac 42584831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8327957 - 8328022
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctct 66  Q
    |||||||||||||  ||||||||||  | ||  ||||||||||||||||||||||||||| |||||    
T  8327957 cttataagtaagagaacccataaacgtaatgccttaaggttttgggtaagagtgtggtgtctctct 8328022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 47964621 - 47964544
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttg 80  Q
    ||||||| ||| |||||||||||  ||||  |||||||||||||||||||||||| || |||||  |||||| |||||    
T  47964621 tataagtgagaggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttg 47964544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52634993 - 52635050
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggt 58  Q
    ||||||| ||||| ||||||||||| |||||  ||||| |||||||||||||||||||    
T  52634993 cttataaataagaggacccataaactcattgccttaagattttgggtaagagtgtggt 52635050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 39336042 - 39336002
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtg 74  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  39336042 ttaaggttttgggtaagagtgtggtgtctctctcgcttgtg 39336002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 37726585 - 37726664
Alignment:
Q  37 aggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccc 116  Q
    ||||||||| ||||||||||  |||| |||| |||||   ||||||||||||||||||||||| ||| ||| | ||||||    
T  37726585 aggttttggataagagtgtgacgtttatcttacttgtatagttgttctagcctcgatgtggacggtcccccgaactcccc 37726664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 17735081 - 17735035
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgttt 62  Q
    |||||||||| |||||  ||||||||||||||||||||| |||||||    
T  17735081 acccataaactcattgacttaaggttttgggtaagagtgcggtgttt 17735035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 19036350 - 19036304
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgttt 62  Q
    |||||||||| |||||  ||||||||||||||||||||| |||||||    
T  19036350 acccataaactcattgacttaaggttttgggtaagagtgcggtgttt 19036304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 9239941 - 9239994
Alignment:
Q  76 ggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    |||| ||||||||||||||||||| ||| ||||||||||||  |||| ||||||    
T  9239941 ggtttttctagcctcgatgtggacggtcccccaagctcccctcatgatccaaca 9239994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 17731994 - 17731949
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgtt 61  Q
    |||||||||| |||||  ||||||||||| ||||||||||||||||    
T  17731994 acccataaacccattgccttaaggttttgagtaagagtgtggtgtt 17731949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 19033225 - 19033180
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgtt 61  Q
    |||||||||| |||||  ||||||||||| ||||||||||||||||    
T  19033225 acccataaacccattgccttaaggttttgagtaagagtgtggtgtt 19033180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 33175733 - 33175649
Alignment:
Q  34 ttaaggttttgggtaagagtgtggt--gtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccc 116  Q
    |||||||||||||||||||||||    || |||||  |||||| | |||||||||||||| ||||| ||||| ||| ||||||||    
T  33175733 ttaaggttttgggtaagagtgtgtgacgtctctctcacttgtgtgattgttctagcctcggtgtgggcagtcccccgagctcccc 33175649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 44290563 - 44290434
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||||     
T  44290563 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtatggtgtctttcttgcttgtacggttgttctagcctcgatgtggacg 44290464  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    ||| ||| |||||||||| |||||||||||    
T  44290463 gtcccccgagctcccccagtgacccaacaa 44290434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44290930 - 44290800
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaa-gagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44290930 cttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtggtgtatctcttgcttgtgcggttgttctagcctcgatgtggac 44290831  T
Q  100 agtctcccaagct-cccccaatgacccaaca 129  Q
     ||| ||| |||| |||||| ||||||||||    
T  44290830 ggtcccccgagctccccccactgacccaaca 44290800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 32168795 - 32168673
Alignment:
Q  9 taagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctccca 108  Q
    ||||| ||||||||||| |||||  || ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| || |    
T  32168795 taagaggacccataaacccattgccttgaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacagtccccta 32168696  T
Q  109 a-gctcccccaatgacccaacaa 130  Q
    | ||||||| | |||||||||||    
T  32168695 aggctcccctagtgacccaacaa 32168673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41157044 - 41157153
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| |     
T  41157044 cttataagtaagaggacccataaactcattgctttaaggttttgggtaagagtgtggtgtctctattgcttgtgtggttgttctagcctcgatgtgggcg 41157143  T
Q  101 gtctcccaag 110  Q
    ||| ||||||    
T  41157144 gtcccccaag 41157153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3537704 - 3537606
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||| ||||||| |||| |||||| |||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  3537704 cttatgagtaagaggacctataaacccattggcttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggac 3537606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 48588593 - 48588485
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||     
T  48588593 cttataagtaagaagacccgtaaattcattgccttaaggttttgggtaagagtgcggtgtctctcttacttgtgcggttgttctagcctcgatgtggacg 48588494  T
Q  101 gtctcccaa 109  Q
    ||| |||||    
T  48588493 gtcgcccaa 48588485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 17294631 - 17294746
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgc-ggttgttctagcctcgatgtggaca 100  Q
    |||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||| |||| ||| ||||| ||||||||||||||||||     
T  17294631 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcgcttatgcaggttgctctagcctcgatgtggacg 17294730  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  17294731 gtcgcccgagctcccc 17294746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41759536 - 41759634
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||||||| |||||||  |||||  ||||||||||||||||||||||||||| |||||||||| || |||||||||||||| |||||||||    
T  41759536 cttataagtaagatgatccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagccttgatgtggac 41759634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 39066305 - 39066178
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||||||||||||||  |||||| |||||||||||| |||||||||||||| |||||| ||| || |||||||||||||| ||||| |||     
T  39066305 cttataactaagatgacccataaaatcattgtcttaaggttttggataagagtgtggtgtctctcttacttatgtggttgttctagccttgatgt-gacg 39066207  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||||| |||||||| ||| ||||||    
T  39066206 gtcccccaaactcccccagtgatccaaca 39066178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41157428 - 41157524
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| ||||||||||| |||||  || |||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  41157428 cttataagtaagaggacccataaacccattgcctttaggttttgagtaagagtgtggtgtctgtcttgcttgtgtggttgttctagcctcgatgtgg 41157524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 37555815 - 37555909
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||| | ||| | | |||||||||||||||||||||    
T  37555815 ttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgtgg-cggtcgctcgagctcccccaatgacccaaca 37555909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 45494077 - 45493951
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagt 102  Q
    |||||||||||||| |||||||| |||||  |||| ||||||| |||||||||||||| |||||| ||| || |||||||| ||||||||||||||| ||    
T  45494077 tataagtaagatgatccataaacccattgccttaaagttttggataagagtgtggtgtctctcttccttatgtggttgttcaagcctcgatgtggacggt 45493978  T
Q  103 ctcccaagct-cccccaatgacccaaca 129  Q
    | ||| |||| |||||||||||||||||    
T  45493977 c-ccccagctccccccaatgacccaaca 45493951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14318920 - 14319018
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||   ||||  ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||||||||    
T  14318920 cttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgtggtgtctctcttatttgtgcggttgttctagcctcaatgtggac 14319018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26661627 - 26661529
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||| ||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||| |||||    
T  26661627 cttataagtgagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctcgcttgtgtggttgttcaagcctcgatatggac 26661529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 40082460 - 40082589
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| || | |||||  |||||  ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| |    
T  40082460 cttataagtaagaggatc-ataaattcattgccttaaggttttgggtaagagtgtggtatctctcttgcttgtgcgtttgttctagcctcgatgtggata 40082558  T
Q  101 gtctcccaagct-cccccaatgacccaacaa 130  Q
    |||  || |||| |||||| |||||||||||    
T  40082559 gtcctccgagctccccccagtgacccaacaa 40082589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41142425 - 41142543
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaa-gagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||| | ||||||||||| |||||  |||||||||| ||||| |||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  41142425 cttataagtaaaaggacccataaacccattgccttaaggtttttggtaaagagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggac 41142524  T
Q  100 agtctcccaagctccccca 118  Q
     ||| ||| || |||||||    
T  41142525 ggtcccccgagttccccca 41142543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 66577 - 66449
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| || ||||||||| || |  |||||||||||||||||||| | | || ||||| ||||||||||||||||||||||| ||||||||     
T  66577 cttataagtaagaggatccataaacatatggccttaaggttttgggtaagagtatagcgtctctctcgcttgtgcggttgttctagcctcaatgtggacg 66478  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||   |||||||||||  |||||||||||    
T  66477 gttatccaagctcccctcatgacccaaca 66449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 24600418 - 24600318
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    ||||||||||||  || ||||||| |||||| ||||||||||| ||||||||||||||| ||||| ||| ||  ||||||||||||||||||||||||||    
T  24600418 ttataagtaagagaactcataaactcattgtcttaaggttttgtgtaagagtgtggtgtctctctcgctagtatggttgttctagcctcgatgtggacag 24600319  T
Q  102 t 102  Q
    |    
T  24600318 t 24600318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31767266 - 31767138
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||| |||  | ||  |||||||||||||||||||||||  || | ||||||||||| ||||||||||| ||||||||||||     
T  31767266 cttataagtaagaggacccattaacctaatgccttaaggttttgggtaagagtgtgacgtctatcttgcttgtgtggttgttctagactcgatgtggacg 31767167  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||||||| |||  |||||||||||    
T  31767166 gtcccccaagcttccctcatgacccaaca 31767138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37556165 - 37556260
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| |||| |||||| ||| |  ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  37556165 cttataagtaagaggacc-ataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgtgg 37556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 50052128 - 50052001
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||  ||| | |||| |||||||||||||||||||||| ||||||| || ||  ||||||||| ||||||||||||||    
T  50052128 cttataagtaagaggacccataaacctattttcttaaagttttgggtaagagtgtggtgtctctcttgtttatg-tgttgttctaacctcgatgtggaca 50052030  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||   ||||||||||    
T  50052029 gtcccccgagctcccctcgtgacccaaca 50052001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 9955962 - 9956057
Alignment:
Q  2 ttataagtaagatgacccat-aaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    |||||||||||| ||||||| ||||  ||||  ||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  9955962 ttataagtaagaggacccattaaaccaattgccttaaggttttgggtaagagtgtgatgtctctcttgcttgtgcggttgctctagcctcgatgtg 9956057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26662003 - 26661888
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||| ||| |||||||||||  ||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||| | ||| |||| |||      
T  26662003 cttataagtgagaagacccataaaccgattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaatccttgatgcggatg 26661904  T
Q  101 gtctcccaagctcccc 116  Q
    ||||||| ||||||||    
T  26661903 gtctccctagctcccc 26661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 45084462 - 45084557
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| |||| ||| |||| ||| |||  |||||||||||    
T  45084462 ttaaggttttgggtaagagagtggtgtctctcttgcttgtgcggttgttctaacctcgatgcggacggtcccccaggcttccctcatgacccaaca 45084557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 5320070 - 5319957
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||| ||| ||||||||||| ||| |  |||||||||||||||||||||| |||| |||||||||| || ||||||||||||||| |||| |||     
T  5320070 cttataagtgagaggacccataaactcatagccttaaggttttgggtaagagtgtagtgtctctcttgcttatgtggttgttctagcctcaatgtagacg 5319971  T
Q  101 gtctcccaagctccc 115  Q
    ||| |||||||||||    
T  5319970 gtc-cccaagctccc 5319957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32594821 - 32594747
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgc 75  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  32594821 cttataagtaagaggacccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgc 32594747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34364978 - 34365075
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||||||||||| ||| |  ||||||||||||||||||||||||||| ||||| |||| ||| |||| |||| ||||||||||||    
T  34364978 cttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctcgcttatgcagttgctctaacctcgatgtgga 34365075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 38804459 - 38804370
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcg 91  Q
    |||||||||||| || |||||||| |||    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  38804459 ttataagtaagaggatccataaacccataaccttaaggttttgggtaagagtgtagtgtctctcttgcttgtgcggttgttctagcctcg 38804370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3550773 - 3550868
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||| ||||||| |||||  |||| |||||||||||||||||||||| ||||||||   | |||||||||||||||||||||||||    
T  3550773 cttataagtaagaggactcataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttgc---tacggttgttctagcctcgatgtggac 3550868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 11977030 - 11977110
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcc 114  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||| ||| ||| ||||||    
T  11977030 ttaaggttttgggtaagagtgtggtgtctctcttgcaagtgcggtagttctagcctcgatgtggacggtcccccgagctcc 11977110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 34364560 - 34364688
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| || || ||||| ||| |  ||||||||||||||||||||||| ||| ||||| |||| |||||||| |||||||||||||||||      
T  34364560 cttataagtaagaggatccgtaaacccatagccttaaggttttgggtaagagtgtgatgtctctctcgcttatgcggttgctctagcctcgatgtggatg 34364659  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||  ||  |||||||||| ||||||||||    
T  34364660 gttccctgagctcccccagtgacccaaca 34364688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37850705 - 37850591
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||||  ||||||||||  | ||| ||||||||| || |||||||||||||| |||||  |||||||||||| ||||||||||||||||||     
T  37850705 cttataagtaagagaacccataaacctaatgttttaaggtttcggataagagtgtggtgtctctctcacttgtgcggttgctctagcctcgatgtggacg 37850606  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  37850605 gtc-ccctagctcccc 37850591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44043877 - 44043810
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttg 68  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||| |||||||    
T  44043877 cttataagtaagatgacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttg 44043810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11977333 - 11977431
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||||  || |||||||  | ||  ||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||    
T  11977333 cttataagtaagagcactcataaacctaatgccttaaggttttgggtaagagtgtgatgtctctcttgcaagtgcggttgttctagcctcgatgtggac 11977431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3875436 - 3875308
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  |||||||||| ||||||| ||||| || |||||  || ||| ||||||||||||||||||||||||     
T  3875436 cttataagtaagaggactcataaacccattgccttaaggttttaggtaagaatgtggagtctctctcactagtgtggttgttctagcctcgatgtggacg 3875337  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    |||  || ||||||||  |||||| ||||    
T  3875336 gtcctccgagctcccctcatgacctaaca 3875308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22077600 - 22077472
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| | | |  |||||||||||||||||||||||| || |||||  ||| ||||||||||| ||| ||||| |||||     
T  22077600 cttataagtaagaggacccataaactcgtagccttaaggttttgggtaagagtgtggcgtctctctcacttatgcggttgttcaagcatcgatatggacg 22077501  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||| |||||||   ||||||||||    
T  22077500 gtcccccaggctccccttgtgacccaaca 22077472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 45839684 - 45839779
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| ||||||||||   | ||  |||||||||||||||||| |||||||| ||||||||||||| | ||||||| |||||||||||    
T  45839684 cttataagtaagaagacccataaatgtaatgccttaaggttttgggtaagattgtggtgtctctcttgcttgtgggattgttctggcctcgatgtg 45839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22077215 - 22077101
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||   ||||||||||| ||||||||||  || || ||  ||| ||||||||||| |||||||||||||||     
T  22077215 cttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtgacgtctccctcacttatgcggttgttcaagcctcgatgtggacg 22077116  T
Q  101 gtctcccaagctccc 115  Q
    ||| |||| ||||||    
T  22077115 gtcccccaggctccc 22077101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 29798252 - 29798378
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  ||||||| |||| |||||||||||||| ||||||||  ||| |||||||||| ||||||| | |||     
T  29798252 cttataagtaagaggactcataaacccattgccttaaggtcttggataagagtgtggtgtctctcttgcaagtgtggttgttctaacctcgatatagacg 29798351  T
Q  101 gtctcccaagctcccccaatgacccaa 127  Q
    ||| ||||| |||   |||||||||||    
T  29798352 gtcccccaaactctatcaatgacccaa 29798378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 34649524 - 34649589
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||||||||||| || || ||||||||| ||| ||||||||||||||||||||||||    
T  34649524 ttaaggttttgggtaagagtgaggcgtctctcttgctagtgtggttgttctagcctcgatgtggac 34649589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 50051776 - 50051665
Alignment:
Q  18 ccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctccccc 117  Q
    |||||||| |||| | ||||||||||| ||||||||||||||| ||||||| || ||  ||||||||||| ||||||||||| ||| ||| ||||||||     
T  50051776 ccataaacccattatcttaaggttttgcgtaagagtgtggtgtctctcttgtttatg-tgttgttctagcatcgatgtggacggtccccctagctcccct 50051678  T
Q  118 aatgacccaacaa 130  Q
      |||||||||||    
T  50051677 cgtgacccaacaa 50051665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5528859 - 5528762
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||| ||||| ||| ||||||| |||| | ||||||||||||||||  |||||| || ||||||  || ||||||||||||| ||||||||||||    
T  5528859 cttataaataagaggactcataaactcattttcttaaggttttgggtaaatgtgtggcgtctctcttctttatgcggttgttctatcctcgatgtgga 5528762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 66192 - 66079
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||  || |  |||||||||||||||||||||||| |   ||||  |||||  ||||||||| |||||||||| ||||    
T  66192 cttataagtaagaggacccataaacctatggccttaaggttttgggtaagagtgtggcg--cctctcacttgtatggttgttctggcctcgatgtagaca 66095  T
Q  101 gtctcccaagctcccc 116  Q
     || ||| ||||||||    
T  66094 atcccccgagctcccc 66079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22077933 - 22077806
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| ||| |  | ||||||| |||||||||||||| || ||| |  ||| ||||||||||| ||| |||||||||||     
T  22077933 cttataagtaagaggacccataaactcatagcct-aaggtttggggtaagagtgtggcgtctctttcacttatgcggttgttcaagcatcgatgtggacg 22077835  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    |||  ||| |||||||   ||||||||||    
T  22077834 gtcctccaggctccccttgtgacccaaca 22077806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 19283527 - 19283464
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    |||||||||||| ||||||||||| || |||||  |||||||||||| |||||||| |||||||    
T  19283527 ttaaggttttggataagagtgtggcgtctctctcacttgtgcggttgctctagcctggatgtgg 19283464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5575157 - 5575252
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| |||| |||||  ||| |  |||||||||||| ||||||||||| || |||||  ||| || ||| |||||||||||||||||||    
T  5575157 cttataagtaagaggacctataaatccatagctttaaggttttggataagagtgtggcgtctctct--cttatgaggtagttctagcctcgatgtgga 5575252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 21378118 - 21378036
Alignment:
Q  47 taagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||||||||| || | | ||||||||| ||||||||||||||| |||||||| ||| ||   ||||||||| ||||||||||    
T  21378118 taagagtgtggcgtctatattgcttgtgtggttgttctagcctcaatgtggacggtcccctgcgctcccccagtgacccaaca 21378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 30630742 - 30630648
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||  ||||||||||||||||  |||| |||||||||||||||| || ||  || |  ||| || ||||||||| |||||||||||    
T  30630742 ttataagtaagagaacccataaacacattgccttaaagttttgggtaagagtggggcgtccctatcacttatgtggttgttctggcctcgatgtg 30630648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 9956258 - 9956212
Alignment:
Q  21 taaacacattgtgttaaggttttgggtaagagtgtggtgtttctctt 67  Q
    |||||||||||| |||| |||||||||||||||||| ||| ||||||    
T  9956258 taaacacattgtcttaatgttttgggtaagagtgtgatgtctctctt 9956212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 24132090 - 24131965
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||  || |||||||| |||||  ||||||||| |||||||  |||||||| |||||  || ||| |||||||||||||||||||| |||     
T  24132090 cttataaataaggggatccataaactcattgccttaaggttt-gggtaag--tgtggtgtctctctcactagtgtggttgttctagcctcgatgtagacg 24131994  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
     |||||  ||| ||||  |||||||||||    
T  24131993 atctcctgagcccccctcatgacccaaca 24131965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 35154106 - 35154049
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgt 60  Q
    ||||||||||| | |||||||||  ||||| |||||||||| || |||||||||||||    
T  35154106 tataagtaagagggcccataaactgattgtcttaaggtttttggcaagagtgtggtgt 35154049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 36005985 - 36005860
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  36005985 cttataagtaagaggacccataaactcattgccttaaggttttgggtaaaagtgtggcgtctctcttgcttgtggggttgttctagcctcgatgtggaca 36005886  T
Q  101 gtctcccaagctcccccaatgacccaa 127  Q
    ||||| | ||||||||| |||||||||    
T  36005885 gtctctcgagctccccc-atgacccaa 36005860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37106241 - 37106339
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37106241 cttataagtaagaggacccataaacccatttccttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcgattgttctagcctcgatgtggac 37106339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 962651 - 962768
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||     
T  962651 cttataagtgagaggacccataaacccattgtcttaaggttttgggtaagagtgtgttgtcactcttgcttgtgtggttgttctagcctcgatgtggacg 962750  T
Q  101 gtctcccaagctccccca 118  Q
    ||||||| | ||||||||    
T  962751 gtctcccgaactccccca 962768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 5542730 - 5542602
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||  ||||  |||||||||| |||||||||||||||| |||||||||||||||||||||| || ||||||||||||     
T  5542730 cttataagtaagaggacccataaacctattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtgcggttgttcaagtctcgatgtggacg 5542631  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||| |||| ||||||    
T  5542630 gtcccccgagctccccccatgatccaaca 5542602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 6421438 - 6421566
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  || |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||     
T  6421438 cttataagtaagaggactcataaactcattgccttgaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagtctcgatgtggacg 6421537  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||   ||||||||||    
T  6421538 gtcccccgagctcccctcgtgacccaaca 6421566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14745772 - 14745656
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||||||||||| || ||||||||  ||| |||||||||||||||||||||||||    
T  14745772 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgcaagtgtggttgttctagcctcgatgtggaca 14745673  T
Q  101 gtctcccaagctccccc 117  Q
    ||| ||| |||||||||    
T  14745672 gtcccccgagctccccc 14745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 37105977 - 37106105
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||  ||||||||||| |||||  ||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||     
T  37105977 cttataagtaaggggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgcttgtacggttgttctagcctcgatgtggacg 37106076  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||   ||||||||||    
T  37106077 gtcccccgagctccccttgtgacccaaca 37106105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 15511599 - 15511473
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||      
T  15511599 ttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagtctcgatgtggacga 15511500  T
Q  102 tctcccaagctcccccaatgacccaaca 129  Q
    || ||| |||||||||| ||| ||||||    
T  15511499 tc-cccgagctcccccagtgaaccaaca 15511473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15880316 - 15880414
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  15880316 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttttagcctcgatgtggac 15880414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36178710 - 36178612
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  36178710 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctctatgtggac 36178612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 6422164 - 6422292
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||| ||||| ||||||||||| ||| |  |||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |    
T  6422164 ttataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggactg 6422263  T
Q  102 tctcccaagctcccccaatgacccaacaa 130  Q
    || |||    |||||| ||||||||||||    
T  6422264 tccccctgattccccccatgacccaacaa 6422292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 42514702 - 42514830
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| ||| |  ||||| |||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||     
T  42514702 cttataagtaagaggacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctcttacttgtggggttgttctagcctcgatgtggacg 42514801  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||   ||||||||||    
T  42514802 gtcccccgagctcccctcgtgacccaaca 42514830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41283580 - 41283465
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||||||||| ||||||||||||| || ||||||| ||||| |||||||||||||| |||||||||     
T  41283580 cttataagtaagaggacccataaactcattgccttaaggttttaggtaagagtgtggcgtctctcttgtttgtgtggttgttctagccttgatgtggacg 41283481  T
Q  101 gtctcccaagctcccc 116  Q
    ||| |||| |||||||    
T  41283480 gtcccccatgctcccc 41283465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 16590941 - 16591066
Alignment:
Q  6 aagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctc 105  Q
    |||||||| |||||||||||||||||  ||||||||||  |||||| | |  ||| |||||| |||||| ||||||||||||||| ||||||||||||||    
T  16590941 aagtaagaggacccataaacacattgccttaaggttttaagtaagaatctaatgtctctcttacttgtggggttgttctagcctcaatgtggacagtctc 16591040  T
Q  106 ccaagctcccc-caatgacccaacaa 130  Q
    || |||||||| ||||||||||||||    
T  16591041 ccgagctcccctcaatgacccaacaa 16591066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 23346305 - 23346418
Alignment:
Q  17 cccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccc 116  Q
    ||||||||| ||| |  |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||    
T  23346305 cccataaacccatagccttaaggttttcggtaagagtgtgatgtctctcttgcttgtgcggttgttctagcctagatgtggacggtcgcccgagctcccc 23346404  T
Q  117 caatgacccaacaa 130  Q
      ||||||||||||    
T  23346405 tcatgacccaacaa 23346418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 40163478 - 40163349
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgtt-aaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||||||||||| |||  | ||| || |||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||||||| ||     
T  40163478 cttataagtaagatgacccattaacctagtgtctttaaggttttgggtaaaagtgtggtgtctctcttgcttgtgtggttgttctaacctcgatgtagat 40163379  T
Q  100 agtctcccaagctcccccaatgacccaaca 129  Q
     ||||||  ||||||||| |||||||||||    
T  40163378 ggtctcctgagctccccctatgacccaaca 40163349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 3673122 - 3673250
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| || |||||||| |||||  ||||| |||||| |||||||||| ||| |||||| || ||| |||||||||||||||||||||||| |    
T  3673122 ttataagtaagaggatccataaactcattgctttaagattttggctaagagtgtgatgtctctcttactagtgtggttgttctagcctcgatgtggacgg 3673221  T
Q  102 tctcccaagctcccccaatgacccaacaa 130  Q
    || |||  ||||||||| |||||||||||    
T  3673222 tccccctggctcccccagtgacccaacaa 3673250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5543103 - 5543005
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| || ||||||||  ||||  ||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  5543103 cttataagtaagaggatccataaacctattgccttaagattttgggtaagagtgtggtgtctctattgcttgtgcggttgttcaagcctcgatgtggac 5543005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 6421793 - 6421911
Alignment:
Q  10 aagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaa 109  Q
    |||| |||||||||||  ||||  ||||||||||||||||||||||||||| |||||  |||||| ||||||||| |||||||||||||| ||| ||| |    
T  6421793 aagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttctggcctcgatgtggacggtcccccga 6421892  T
Q  110 gctcccccaatgacccaac 128  Q
    |||||||  ||||||||||    
T  6421893 gctcccctcatgacccaac 6421911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33731701 - 33731795
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgt 95  Q
    ||||||||||||| || ||||||||  ||||  |||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  33731701 cttataagtaagaggatccataaacctattgccttaaggttttgggtaagagtatggtgtctctcttgcttatgcggttgttctagcctcgatgt 33731795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 35580828 - 35580703
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||| ||| |||| |||||| |||||  ||||||||||||||||||||| || || ||||||| ||||| ||||||||||||||||||||||||     
T  35580828 cttataagtgagaggacc-ataaacccattgccttaaggttttgggtaagagtgcggcgtctctcttgtttgtggggttgttctagcctcgatgtggacg 35580730  T
Q  101 gtctcccaagctcccccaatgacccaa 127  Q
    ||| |||   |||||||||||||||||    
T  35580729 gtccccctgactcccccaatgacccaa 35580703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5367508 - 5367599
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcga 92  Q
    |||||||||||||||| |||| |||||||    |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  5367508 cttataagtaagatgatccatgaacacataaccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcagttgttctagcctcga 5367599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 36178276 - 36178146
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||   |||||||||| |||||  ||||| ||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||| |||     
T  36178276 cttataagtaagggaacccataaacccattgccttaagattttgggtaagagtgtggtgcctctcttgcttgtgtggttgttatagcctcgatgtagacg 36178177  T
Q  101 gtctcccaagctcccccaatgacccaacaag 131  Q
    ||| |||  |||||||   ||||||||||||    
T  36178176 gtcccccgcgctcccctcgtgacccaacaag 36178146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1769945 - 1770073
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| ||| |  || | | ||||  |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||     
T  1769945 cttataagtaagaggactcataaactcatagctttgaagctttgaataagagtgtggtgtctctcttgcttgtgaggttgttctagcctcgatgtgaacg 1770044  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
     ||  || |||||||||||||||||||||    
T  1770045 atcctcctagctcccccaatgacccaaca 1770073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36784365 - 36784273
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgat 93  Q
    ||||||||||||||||||||||||| | |||| |||||||||||| ||| ||||| |||| ||||||||||||| |||| ||| |||||||||    
T  36784365 cttataagtaagatgacccataaaccctttgtcttaaggttttggataaaagtgttgtgtctctcttgcttgtgtggttattcaagcctcgat 36784273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6713029 - 6713128
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggtttt-gggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| |||||||||||  ||||  |||||||||| ||||||||||||| ||| |||||||||| || | ||||||||||||||||||||||    
T  6713029 cttataagtaagaggacccataaacctattgctttaaggtttttgggtaagagtgtgatgtctctcttgcttatgggattgttctagcctcgatgtggac 6713128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28254342 - 28254258
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagc 87  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||||  |||||| ||||||||||||    
T  28254342 cttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctct--cttgtggggttgttctagc 28254258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 38796725 - 38796593
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagt--gtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| |||||||||||  | ||  ||||||||||||||||||||  |||| || ||| ||||||||| |||||||| ||||||||||| ||    
T  38796725 cttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtatgtggcgtctctattgcttgtgtggttgttcaagcctcgatgtcga 38796626  T
Q  99 cagt--ctcccaagctcccccaatgacccaaca 129  Q
    | ||  |||| | ||||||||||||||||||||    
T  38796625 cggtccctccaaggctcccccaatgacccaaca 38796593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40679734 - 40679636
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||||  |||||||||| ||| |  ||||| |||||||||||||||||| || |||||| |||||| ||||||||||| ||||||||||||    
T  40679734 cttataagtaagagaacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctcttacttgtggggttgttctagtctcgatgtggac 40679636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 37632701 - 37632604
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||| ||||||||||| |||    ||||||||||||||||||||||||||| |||||| |  ||| | ||||||||||||||||||||||    
T  37632701 ttataagtaagaggacccataaacccataactttaaggttttgggtaagagtgtggtgtatctcttacaagtgtgattgttctagcctcgatgtggac 37632604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7598281 - 7598376
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||| ||||| ||||||||||| ||| |  |||||||||||||||||| | |||||| |||||  ||||||||||||||| ||||||||||||    
T  7598281 cttataaataagaggacccataaactcatagccttaaggttttgggtaagaatatggtgtctctctcacttgtgcggttgttcaagcctcgatgtg 7598376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 14745395 - 14745282
Alignment:
Q  5 taagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgt-gcggttgttctagcctcgatgtggacagtc 103  Q
    |||||| || ||||||||||| |||||  |||||||||||||||||||||||| || |||||||   || | ||||||||||||||||||||||||| ||    
T  14745395 taagtatgaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgtaagtggtggttgttctagcctcgatgtggacaatc 14745296  T
Q  104 tcccaagctccccc 117  Q
     | ||| |||||||    
T  14745295 cctcaaactccccc 14745282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 3672773 - 3672852
Alignment:
Q  20 ataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||| |||||  ||||| ||||||||||||||||||||| ||||||  ||||| ||||||||||| ||||||||||||    
T  3672773 ataaacccattgccttaagattttgggtaagagtgtggtgtctctcttaattgtgtggttgttctagtctcgatgtggac 3672852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 6421688 - 6421777
Alignment:
Q  10 aagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||| |||||||||||  ||||  | ||||||||||||||||||||||||| |||||  |||||| ||||||||  ||||||||||||||    
T  6421688 aagaggacccataaacctattgactaaaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttccggcctcgatgtggac 6421777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28531419 - 28531322
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| | ||||||||| |||||  ||||| ||||||||||||||||||||  |||||   || ||| |||| |||||||||||||||||    
T  28531419 cttataagtaagaggtcccataaactcattgccttaagattttgggtaagagtgtggtgactctctcagttatgcagttgctctagcctcgatgtgga 28531322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 31899170 - 31899079
Alignment:
Q  38 ggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaacaa 130  Q
    ||||||||||||||||| ||| | ||||||||||||| |||| ||||| |||||||||| || ||| ||||||||||||  |||| |||||||    
T  31899170 ggttttgggtaagagtgaggtatctctcttgcttgtggggttcttctaacctcgatgtgaacggtc-cccaagctcccctcatgatccaacaa 31899079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 29676621 - 29676680
Alignment:
Q  40 ttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||| | |||||||||||||    
T  29676621 ttttgggtaagagtgtggtgtctctcttgcttgtggggttattcaaacctcgatgtggac 29676680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 33561555 - 33561501
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtg 56  Q
    |||||||| ||| ||||||||||| |||||| |||||||||||||||||||||||    
T  33561555 ttataagtgagaggacccataaactcattgtcttaaggttttgggtaagagtgtg 33561501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 40733570 - 40733667
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| |||||||||||  |     |||| |||||||||||||||||||||| ||||| ||||||| ||| |||| || |||||||||||    
T  40733570 cttataagtaagaggacccataaacctacaaccttaaagttttgggtaagagtgtggtgtctctctcgcttgtgtggtagttcaagtctcgatgtgga 40733667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 40733968 - 40734033
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||| |||||||||||||||||||||| | ||| ||||||| |||||||| || ||||||||||||    
T  40733968 ttaaagttttgggtaagagtgtggtgtctgtctcgcttgtgtggttgttcaagtctcgatgtggac 40734033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 22062885 - 22062834
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctct 66  Q
    |||||||||||  ||||| ||| |||||||||||||||||||||||||||||    
T  22062885 gacccataaacttattgttttatggttttgggtaagagtgtggtgtttctct 22062834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 28226404 - 28226455
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctct 66  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||| |||||    
T  28226404 gacccataaacacattgtcttagggttttaggtaagagtgtggtgtctctct 28226455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 29676975 - 29677058
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||| |||||  |||||| |||  ||||||||||||||| ||||||  ||||| |||||||| | ||||||||||||    
T  29676975 gacccataaacccattgccttaaggctttaagtaagagtgtggtgtctctcttaattgtggggttgttccaacctcgatgtgga 29677058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36178374 - 36178320
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgt 55  Q
    ||||||||||||  ||| ||||||| |||||| ||||||||||||||||||||||    
T  36178374 cttataagtaaggggactcataaacccattgtcttaaggttttgggtaagagtgt 36178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 7598687 - 7598752
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||| ||||| |||||||||||||||| |||||  |||||| |||||||| ||| |||||||||||    
T  7598687 ttaacgtttttggtaagagtgtggtgtctctctcacttgtgtggttgttcaagcatcgatgtggac 7598752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 12529131 - 12529038
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||| ||| ||||||| |||||  |||| ||||| | |||||  || |||| ||||||| |||||||||||||||| |||| |||||    
T  12529131 tataagtaagaggactcataaactcattgccttaaagttttagataagaacgtagtgtctctcttgtttgtgcggttgttctaacctcaatgtg 12529038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 37895148 - 37895103
Alignment:
Q  19 cataaacacattgtgttaaggttttgggtaagagtgtggtgtttct 64  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||    
T  37895148 cataaacccattgccttaaggttttgggtaagagtgtggtgtttct 37895103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30313230 - 30313318
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcct 89  Q
    ||||||||| ||| |||||| |||| |||||  ||||| |||||||||||||||||| || |||||  |||||| ||||| ||| ||||    
T  30313230 cttataagtgagaggacccaaaaactcattgccttaagattttgggtaagagtgtggcgtctctctcacttgtgtggttgctctggcct 30313318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 31468847 - 31468800
Alignment:
Q  9 taagatgacccataaacacattgtgttaaggttttgggtaagagtgtg 56  Q
    ||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  31468847 taagaggacccataaactcattgccttaaggttttgggtaagagtgtg 31468800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 25390372 - 25390314
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgt 60  Q
    |||||| ||||| |||||||||||  ||||| |||||||||||||||  ||||||||||    
T  25390372 ttataactaagaagacccataaacctattgtcttaaggttttgggtagaagtgtggtgt 25390314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 2578547 - 2578419
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||||||||||| ||| |  ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |    
T  2578547 ttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacgg 2578448  T
Q  102 tctcccaagctcccccaatgacccaacaa 130  Q
    || ||| ||| ||||  ||||||||||||    
T  2578447 tccccctagcccccctcatgacccaacaa 2578419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 35210257 - 35210384
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||  |||||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||     
T  35210257 cttataagtaagaggacccataaaaccattgccttaaggttttgggtaagagtgtggtgtttcttttgcttgtgcggttgctctagcctcgatgtggacg 35210356  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||  ||||||||| ||||||||||    
T  35210357 gtc-ccctggctcccccagtgacccaaca 35210384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3409312 - 3409407
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3409312 cttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 3409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29518556 - 29518654
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| ||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29518556 cttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 29518654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29518973 - 29519071
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| ||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29518973 cttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 29519071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32741232 - 32741330
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| ||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32741232 cttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 32741330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 16454628 - 16454756
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  ||||| |||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||     
T  16454628 cttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacg 16454727  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||   ||||||||||    
T  16454728 gtcccccgagctcccctcgtgacccaaca 16454756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16454960 - 16455075
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||| | |||||||||||  ||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||     
T  16454960 cttataagtaataggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacg 16455059  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  16455060 gtcccccgagctcccc 16455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 3415513 - 3415642
Alignment:
Q  3 tataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgt--tctagcctcgatgtggaca 100  Q
    ||||||||||| ||||||||||| |||||  |||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||      
T  3415513 tataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtgcggttgttctctagcctcgatgtggaag 3415612  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    ||| ||||||||||||   |||||||||||    
T  3415613 gtcccccaagctccccttgtgacccaacaa 3415642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1846801 - 1846928
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||||  |||||||||  |||||  |||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||     
T  1846801 cttataagtaagagcacccataaatccattgccttaaggttttggataagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacg 1846900  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| |||| |||| |||||||||||    
T  1846901 gtcccccgagcttcccc-atgacccaaca 1846928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 2377807 - 2377935
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| | ||||||||| | |||| ||||||||||||||||||      
T  2377807 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctttcttgcttgagtggtttttctagcctcgatgtggaag 2377906  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| |||| ||||| ||||||||||    
T  2377907 gtcccccgagcttccccagtgacccaaca 2377935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 16107731 - 16107827
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| ||| ||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  16107731 cttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgctctagcctcgatgtgg 16107827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 2579976 - 2579850
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||||||||||| ||  |  |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||  |    
T  2579976 ttataagtaagaggacccataaacccacagccttaaggttttgggtaagaatgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggaagg 2579877  T
Q  102 tctcccaagctcccccaatgacccaaca 129  Q
    || ||||||||||||  || ||||||||    
T  2579876 tc-cccaagctcccctcattacccaaca 2579850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10074468 - 10074353
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||||  || ||| ||||||||||||||||||||||| |    
T  10074468 cttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggata 10074369  T
Q  101 gtctcccaagctcccc 116  Q
    ||| |||| |||||||    
T  10074368 gtcccccaggctcccc 10074353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3409713 - 3409811
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  || |  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3409713 cttataagtaagaggacccataaacccattgcctttattttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 3409811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14748443 - 14748330
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||    ||||||||||||| ||||||||||||||||||||||||     
T  14748443 cttataaataagaggacccataaactcattgcgttaaggttttgggtaagagtgtgg----tctcttgcttgtgtggttgttctagcctcgatgtggacg 14748348  T
Q  101 gtctcccaagctccccca 118  Q
    ||| |||  |||||||||    
T  14748347 gtcccccgcgctccccca 14748330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2843607 - 2843737
Alignment:
Q  1 cttataagtaagatgaccc-ataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||| |||||| |||||  ||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||    
T  2843607 cttataagtaagaggaccccataaactcattgccttaaggttttgggtaagagtgtggtatctctcttgcttgagtggttgttctagcctcgatgtggac 2843706  T
Q  100 agtctcccaagctcccccaatgacccaacaa 130  Q
     ||| ||| | ||||||  |||| |||||||    
T  2843707 ggtccccctaactcccctcatgatccaacaa 2843737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2378179 - 2378308
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| ||||   |||||||||| ||||||| |||||||| ||||||||||| | ||||||||||||||||||||||||     
T  2378179 cttataagtaagaggacccataaacccattaccttaaggttttaggtaagaatgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggacg 2378278  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    ||| ||| |||| | | | |||||||||||    
T  2378279 gtcccccgagcttctctagtgacccaacaa 2378308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 26544103 - 26544230
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||||||||||| ||  |  ||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||| ||||| | ||    
T  26544103 ttataagtaagaggacccataaacccaccgccttaaggttttgagtaagagtgtgatgtctctcttgcttgtgcgattgttctagcctcaatgtgaagag 26544202  T
Q  102 tctcccaagctcccccaatgacccaaca 129  Q
    || ||| |||| ||||| ||||||||||    
T  26544203 tcccccgagcttccccagtgacccaaca 26544230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2579597 - 2579500
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| | ||||||||| |||||  |||||||||||||||| ||| |||||| ||||||||||||| |||||||||| ||||||||||||    
T  2579597 cttataagtaagagggcccataaactcattgccttaaggttttgggtaaaagtatggtgtctctcttgcttgtgtggttgttctaacctcgatgtgga 2579500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3058279 - 3058387
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||| || || |||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||  ||| |||||| |||||||||||||     
T  3058279 cttataagtatgaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtagggtggttctaacctcgatgtggacc 3058378  T
Q  101 gtctcccaa 109  Q
    ||| |||||    
T  3058379 gtcccccaa 3058387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2578940 - 2578825
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||| ||||| || |||||||| ||||   ||||||||||||||||||||||||||| ||| ||||||||| |||||||||  |||||||||||||     
T  2578940 cttataaataagaggatccataaactcattaccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgtggttgttctgacctcgatgtggacg 2578841  T
Q  101 gtctcccaagctcccc 116  Q
    ||| |||| |||||||    
T  2578840 gtcccccaggctcccc 2578825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10074096 - 10073998
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||| |||||||||| ||||| |||| |  ||||||||||||||||| ||||||    
T  10074096 cttataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtgtggtgtctctctcgcttatttggttgttctagcctcgacgtggac 10073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10073721 - 10073623
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| || |||||||| |||||  ||||| ||||||||||||||||||||| |||||  || ||| |||||||||||| |||||||||||    
T  10073721 cttataagtaagaggatccataaactcattggcttaagattttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcatcgatgtggac 10073623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 12085106 - 12085014
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgaccca 126  Q
    |||||||||||||||||||||||| || |||||  |||||| ||||||||||||||||||| | || |||||| |||||||||  ||||||||    
T  12085106 ttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgcgaacggtctcctaagctcccctcatgaccca 12085014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 2579181 - 2579087
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    |||||| ||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||| || ||| ||| ||||||||  |||||||||||    
T  2579181 ttaaggctttggctaagagtgtggtgtctctcttgctcgtgtggttgttctagcctcgatgtgcacggtc-cccgagctcccctcatgacccaaca 2579087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 12071763 - 12071668
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    |||||||||||||||||||||||| || |||||  |||||| ||||||||||||||||||||| || ||| || |||||||||  |||||| ||||    
T  12071763 ttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgtgaacggtcccctaagctcccctcatgacctaaca 12071668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 31714736 - 31714849
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcc 114  Q
    ||||||| ||| |||||  ||||||||||| |||||||||||| |||| | | ||||||| ||||| |||||||||||||||||| ||||||||  ||||    
T  31714736 gacccattaactcattgccttaaggttttgagtaagagtgtggcgttttt-tcgcttgtgtggttgctctagcctcgatgtggacggtctcccagactcc 31714834  T
Q  115 cc-caatgacccaac 128  Q
    || ||||||||||||    
T  31714835 cctcaatgacccaac 31714849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 5832099 - 5832007
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaa 127  Q
    ||||| |||||||||| |||||||||| |||||| |||||| |||||||||||||||||||| ||| ||| |||| |||||||  |||||||||    
T  5832099 ttaagattttgggtaaaagtgtggtgtctctcttacttgtgtggttgttctagcctcgatgtagacggtc-cccaggctcccctcatgacccaa 5832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6999901 - 6999796
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||| |||||| || |||||||| || ||  |||||||||||| ||||||||||| || |||||||||  || ||||||||||| ||||||||||||     
T  6999901 cttatatgtaagaggatccataaactcactgccttaaggttttggataagagtgtggcgtctctcttgctaatgtggttgttctagtctcgatgtggacg 6999802  T
Q  101 gtctcc 106  Q
    ||||||    
T  6999801 gtctcc 6999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1127413 - 1127509
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| ||| ||||||| ||||   |||||||||||||||||||||||| || |||||| ||| || ||||| |||| |||||||||||    
T  1127413 cttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctctcttacttatgtggttgctctaacctcgatgtgg 1127509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 3409405 - 3409452
Alignment:
Q  52 gtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  3409405 gtgtggtgtctctcttgcttatgcggttgttctagcctcgatgtggac 3409452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 16108150 - 16108233
Alignment:
Q  47 taagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctc-ccaagctcccccaatgacccaaca 129  Q
    |||| ||||||||| ||||||||||||| ||||||| || ||||||||||||| ||| | || |||||||||| ||||||||||    
T  16108150 taagggtgtggtgtctctcttgcttgtggggttgttataacctcgatgtggacggtccctccgagctcccccagtgacccaaca 16108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 593814 - 593697
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctct--tgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||| |||||||  | ||  |||||||||||||||| |||||||| | |||||  | ||||| |||||||||||| |||||||| ||    
T  593814 cttataagtaagaggactcataaaccgactgccttaaggttttgggtaatagtgtggtatctctctcttacttgtacggttgttctaggctcgatgttga 593715  T
Q  99 cagtctcccaagctcccc 116  Q
    | ||| ||| ||||||||    
T  593714 cggtcccccgagctcccc 593697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 1950257 - 1950200
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcg 91  Q
    ||||||||||| |||||||||||  || |||||| |||||||||||||||||||||||    
T  1950257 ttaaggttttgagtaagagtgtgacgtctctcttacttgtgcggttgttctagcctcg 1950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 10911619 - 10911730
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  |||| ||||||  |||||||||| ||| |||||| ||  ||  ||||||| |||||||||||||||     
T  10911619 cttataagtaagaggactcataaactcattgccttaaagttttgaataagagtgtgatgtctctcttactaatgttgttgttcaagcctcgatgtggacg 10911718  T
Q  101 gtctcccaagct 112  Q
    || |||| ||||    
T  10911719 gtatcccgagct 10911730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 12092586 - 12092491
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    |||||||| ||| || |||||||| |||||  ||||||||||| |||||| |||||||| |||||  |||||| ||||| ||| |||| |||||||    
T  12092586 ttataagtgagaggatccataaactcattgccttaaggttttgagtaagactgtggtgtctctctcacttgtgaggttgctctggcctggatgtgg 12092491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32460685 - 32460630
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtg 56  Q
    ||||||||||||| ||| ||||||| |||||  |||||||||||||||||||||||    
T  32460685 cttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtg 32460630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 8481980 - 8482045
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctctt 67  Q
    |||||| | ||||||| ||||||| |||||  ||||| ||||||||||||||||||||| ||||||    
T  8481980 ttataaatgagatgactcataaactcattgccttaagattttgggtaagagtgtggtgtctctctt 8482045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9062454 - 9062383
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgt 73  Q
    ||||||||||||| ||| ||||||| |||||| |||| ||||||||||| |||||||| | |||||| |||||    
T  9062454 cttataagtaagaggactcataaactcattgtcttaa-gttttgggtaaaagtgtggtatctctcttacttgt 9062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 6071186 - 6071257
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgt 73  Q
    |||||||| |||||| |||||||| |||||  ||||| |||||| ||||||||||| || ||||| ||||||    
T  6071186 ttataagtgagatgatccataaactcattgccttaagattttggataagagtgtggcgtctctctcgcttgt 6071257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 11637811 - 11637760
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctctt 67  Q
    |||||||||| |||||| ||||| |||||| |||||||||||||| ||||||    
T  11637811 acccataaacccattgtcttaagattttggataagagtgtggtgtctctctt 11637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 22605345 - 22605299
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgttt 62  Q
    |||||||||| |||||  |||||||||||||||||| ||||||||||    
T  22605345 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 22605299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 6e-33; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11845244 - 11845372
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||  |||||  |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| |||     
T  11845244 cttataagtaagaggacccataaatccattgccttaaggttttggataagagtgtggtgtctctcttgcttgtgcagttgttctagcctcgatgtagacg 11845343  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||  ||||||||| ||||||||||    
T  11845344 gtcccccgtgctcccccagtgacccaaca 11845372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 37533469 - 37533341
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||  |||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||     
T  37533469 cttataagtaagaggacccataaatccattgccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacg 37533370  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| |||  |||||||   ||||||||||    
T  37533369 gtcccccgcgctcccctcgtgacccaaca 37533341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 1085720 - 1085593
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||||| ||||||||||| |||||  |||||||||||||||||||||||| || |||||| |||||| |||||||||||||||||||||||| |    
T  1085720 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttacttgtgtggttgttctagcctcgatgtggacgg 1085621  T
Q  102 tctcccaagctcccccaatgacccaaca 129  Q
    || |||  |||||||  |||||||||||    
T  1085620 tccccctggctcccctcatgacccaaca 1085593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23482 - 23368
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||  ||||  ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||     
T  23482 cttataagtaagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttgcatgtgcggttgttctagcctcgatttggacg 23383  T
Q  101 gtctcccaagctccc 115  Q
    ||| ||| |||||||    
T  23382 gtcccccgagctccc 23368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36939838 - 36939741
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgga 98  Q
    ||||||||||||| ||||||||||  |||||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36939838 cttataagtaagaggacccataaatccattgccttaaggttttgggtaaaagtgtggtgtttctcttgcttatgcggttgttctagcctcgatgtgga 36939741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 6054613 - 6054741
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||| |||| | |||||  |||||||||||||| |||||||||     
T  6054613 cttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctcctacttgtatggttgttctagccttgatgtggacg 6054712  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||| || | ||||||||||    
T  6054713 gtcccccgagctctccgactgacccaaca 6054741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40094879 - 40094783
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  40094879 cttataagtaagaggacccataaacccatcgtcttaaggttttgggtaagagtgtggcgtctctcttgcttgtgaggttgttctagcctcgatgtgg 40094783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 45754768 - 45754895
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||||||| ||||||| ||| |  ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| | |     
T  45754768 cttataagtaagatgactcataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgtag-cg 45754866  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| | | |||||||||||||||||||||    
T  45754867 gtcactcgagctcccccaatgacccaaca 45754895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22567144 - 22567029
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  |||||||||| |||||||||||||||| ||||||||||||| ||||||||  |||||||||||||      
T  22567144 cttataagtaagaggacccataaactcattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtggggttgttcgggcctcgatgtggatg 22567045  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  22567044 gtcccccgagctcccc 22567029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 47129455 - 47129549
Alignment:
Q  34 ttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||  |||||||||||    
T  47129455 ttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcgatgtggacggtc-cccgagctcccctcatgacccaaca 47129549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37533115 - 37533018
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| |||||  |||||||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  37533115 cttataagtaagaggacccataaactcattgccttaaggttttgggtaa-agtgtggtgtctctcttgcttgtgcgcttgttctaacctcgatgtggac 37533018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 9901713 - 9901794
Alignment:
Q  18 ccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||| |||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  9901713 ccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttgctagtgcggttgttctagcctcggtgtggac 9901794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 34218139 - 34218010
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||| ||| ||| ||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||  |||||||| |||||||||||||||     
T  34218139 cttataagtgagaggactcataaacccattgtcttaaggttttgggtaagagtgtggtgtctctctcgcttgtatggttgttcaagcctcgatgtggacg 34218040  T
Q  101 gtctcccaagctcccccaatgacccaacaa 130  Q
    |||  || ||||||||| || | |||||||    
T  34218039 gtcctccgagctccccccataatccaacaa 34218010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7517633 - 7517729
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| | |||  |||||| ||||||||||||||||||||||    
T  7517633 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctgtctcacttgtgtggttgttctagcctcgatgtgg 7517729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 37167840 - 37167932
Alignment:
Q  7 agtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||| || |||||||  |||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37167840 agtaagaggatccataaatccattgacttaaagttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 37167932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30244323 - 30244438
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||| ||||||| |||||  ||||||||||||||||||||||||||| |||||  |||||| |||||||| ||||||||||||||      
T  30244323 cttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggatg 30244422  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  30244423 gtcccccgagctcccc 30244438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 45433294 - 45433390
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    |||||||||||||  || |||||||  ||||  ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  45433294 cttataagtaagagaactcataaacctattgccttaagattttgggtaagagtgtggtgtctctcttgcttgtggggttgttctagcctcgatgtgg 45433390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19122784 - 19122879
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| ||| ||||||  |||||  ||||||||||||||||||||||||||| | ||||||||||| ||||||||||| |||||||||    
T  19122784 cttataagtaagaggactcataaatccattgccttaaggttttgggtaagagtgtggtgtctatcttgcttgtgtggttgttctagtctcgatgtg 19122879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29157618 - 29157725
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||  |||||  ||||||||||||||||||||||||||| ||||||||| |||  |||| ||||| || |||||||||     
T  29157618 cttataagtaagacgacccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgctcgtgtagttgctctagtcttgatgtggacg 29157717  T
Q  101 gtctccca 108  Q
    ||||||||    
T  29157718 gtctccca 29157725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 30245130 - 30245254
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||    |||||| |||||||| ||||||||||||||      
T  30245130 cttataagtaagacgacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct----cttgtgtggttgttcaagcctcgatgtggatg 30245225  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||   ||||||||||    
T  30245226 gtcccccgagctcccctcgtgacccaaca 30245254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30032620 - 30032736
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||||  | ||||||||  || |  |||||||||||||||||||||||   | |||||||||||||||||||||||| |||||||||||||     
T  30032620 cttataagtaagagtatccataaacctatagccttaaggttttgggtaagagtgtgacatctctcttgcttgtgcggttgttctatcctcgatgtggacg 30032719  T
Q  101 gtctcccaagctccccc 117  Q
    ||| ||| |||||||||    
T  30032720 gtcccccgagctccccc 30032736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24177488 - 24177595
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||  ||||||||||| |||||  |||| ||||| ||||||||||||| || ||||||||||||||||||||  ||||||||| ||||||     
T  24177488 cttataagtaagcggacccataaacccattgccttaaagtttttggtaagagtgtggcgtctctcttgcttgtgcggttgtcttagcctcgacgtggacg 24177587  T
Q  101 gtctccca 108  Q
    ||| ||||    
T  24177588 gtccccca 24177595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 37532821 - 37532758
Alignment:
Q  36 aaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  37532821 aaggttttgggtaagagtgtggtgtctctctagcttgtgctgttgttctagcctcgatgtggac 37532758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 45434689 - 45434784
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtg 96  Q
    ||||||||||||| |||||||||||  | ||  ||||||||||||||||||||||| ||| |||||| ||||||  ||||||||||||||||||||    
T  45434689 cttataagtaagaggacccataaacttactgccttaaggttttgggtaagagtgtgatgtctctcttacttgtggagttgttctagcctcgatgtg 45434784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30253545 - 30253656
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||||||||  |||||||||| |||||  ||||||||||||||||||||||||||| |||    |||||| |||||||| ||||||||||||||      
T  30253545 cttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct----cttgtgtggttgttcaagcctcgatgtggatg 30253640  T
Q  101 gtctcccaagctcccc 116  Q
    ||| ||| ||||||||    
T  30253641 gtcccccgagctcccc 30253656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 118403 - 118276
Alignment:
Q  4 ataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgttt--ctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    |||||||||| || |||||||| ||||    ||||||||||||||||||||||| || |  |||||||||||| |||||||||||| | ||||||||| |    
T  118403 ataagtaagaggatccataaacccattaccgtaaggttttgggtaagagtgtggcgtctatctcttgcttgtgtggttgttctagctttgatgtggacgg 118304  T
Q  102 tctcccaagctcccccaatgacccaacaa 130  Q
    || |||| ||||||||| |||||||||||    
T  118303 tc-cccaggctcccccagtgacccaacaa 118276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 14681567 - 14681667
Alignment:
Q  5 taagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtct 104  Q
    ||||||||| | ||||||||| |||||| ||||||||||||||||||||||||||| ||||   |  ||| |||||||||||||| ||||||||| ||||    
T  14681567 taagtaagagggcccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctca--caagtgtggttgttctagccttgatgtggacggtct 14681664  T
Q  105 ccc 107  Q
    |||    
T  14681665 ccc 14681667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 1085350 - 1085280
Alignment:
Q  4 ataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtg 74  Q
    ||||||||||  |||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||    
T  1085350 ataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtttctcttccttgtg 1085280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 28300641 - 28300575
Alignment:
Q  34 ttaaggttttggg-taagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  28300641 ttaaggttttggggtaagagtgtggtgtctctcttgcttgtgtggttattctagcctcgatgtggac 28300575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 47129148 - 47129275
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| ||| |  ||||||||||||||| ||||||||||| |||||  |  ||| ||||||||||||||| |||| |||     
T  47129148 cttataagtaagaggacccataaacccatcgctttaaggttttgggtaggagtgtggtgtctctctcacaagtgtggttgttctagcctcaatgtagacg 47129247  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| ||||||||  |||| ||||||    
T  47129248 gtc-cccgagctcccctcatgatccaaca 47129275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 8128546 - 8128444
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||| |||||| ||||||||||| |||    |||||||||||| ||||||||||||||  |||| |||| || |||||||||||| |||||||| |||    
T  8128546 cttatatgtaagaggacccataaacccataaccttaaggttttggttaagagtgtggtgtcactctcgcttatgtggttgttctagcatcgatgtgaaca 8128447  T
Q  101 gtc 103  Q
    |||    
T  8128446 gtc 8128444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40230396 - 40230298
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||||| ||||||||||| ||| || |||||||||||||||| ||| |||||| ||||||||  |||  ||| ||||| |||| ||||||||    
T  40230396 cttataagtaagaggacccataaacccatagtcttaaggttttgggtaaaagtctggtgtctctcttgcaagtgtagttattctaacctctatgtggac 40230298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41854687 - 41854781
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgt 95  Q
    |||||||| ||||||||| ||||| | | ||  |||||||||||||||||||||||  || | |||| |||||||||||||||||||||| ||||    
T  41854687 cttataagcaagatgacctataaatataatgccttaaggttttgggtaagagtgtgacgtctttcttacttgtgcggttgttctagcctcaatgt 41854781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7554078 - 7554151
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtg 74  Q
    ||||||||||||| || |||||||| ||| |  ||||||||||||||||||||||||||| ||||| |||||||    
T  7554078 cttataagtaagaggatccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctcgcttgtg 7554151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 30253671 - 30253752
Alignment:
Q  49 agagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaacaa 130  Q
    |||||||||||| |||||  |||||| |||||||| ||||||||||||||| ||| |||| |||||||  ||||||||||||    
T  30253671 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggactgtcccccaggctcccctcatgacccaacaa 30253752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 5825621 - 5825562
Alignment:
Q  69 cttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||||    
T  5825621 cttgtgcggttgttctagccttgatgtggacggtctcccaagctccctc-atgacccaaca 5825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22566767 - 22566711
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtgg 57  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||    
T  22566767 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 22566711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16569249 - 16569316
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttg 68  Q
    ||||||||||||| ||||||||||| |||||  |||||||||| |||||||||| ||||| |||||||    
T  16569249 cttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctcttg 16569316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16596413 - 16596346
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttg 68  Q
    ||||||||||||| ||||||||||| |||||  |||||||||| |||||||||| ||||| |||||||    
T  16596413 cttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctcttg 16596346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24838807 - 24838724
Alignment:
Q  1 cttataagtaagatg-acccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttc 83  Q
    ||||||||||||| | | |||||||| | |||| |||||||||||||||||||||||  || ||||||||||||| ||||||||    
T  24838807 cttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaagagtgtgacgtctctcttgcttgtgtggttgttc 24838724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28300359 - 28300260
Alignment:
Q  1 cttataagtaagatgaccc-ataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||||  |||| |||||| |||||  ||||| |||||||||||||||||| || ||||||||  ||| ||||||||  ||||||||||||||    
T  28300359 cttataagtaagagaaccccataaacccattgccttaagattttgggtaagagtgtggcgtctctcttgcaagtgtggttgttcgggcctcgatgtggac 28300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 4719359 - 4719305
Alignment:
Q  43 tgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||    
T  4719359 tgggtaagagtgtggtatttctcttgtttgtgcggttgctctagcctcgttgtgg 4719305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 30244453 - 30244534
Alignment:
Q  49 agagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaacaa 130  Q
    |||||||||||| |||||  |||||| |||||||| ||||||||||||||| ||| | || |||||||  ||||||||||||    
T  30244453 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggacggtccctcaggctcccctcatgacccaacaa 30244534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 30245256 - 30245336
Alignment:
Q  49 agagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    |||||||||||| |||||  |||||| |||||||| |||||| |||||||| ||| |||| |||||||  |||||||||||    
T  30245256 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcaatgtggacggtcccccatgctccccttatgacccaaca 30245336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 21619136 - 21619091
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgt 60  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||    
T  21619136 gacccataaacccattgtcttaaggttttgggtaaaagtgtggtgt 21619091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 36534889 - 36534795
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| |||||||||||  |  || |||||||||||||||||||||||| |  |||||  |  ||| |||||||| |||||||||||||    
T  36534889 cttataagtaagaggacccataaacctaaagtcttaaggttttgggtaagagtgtggcg--tctctcacaagtgtggttgttccagcctcgatgtgg 36534795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 20599368 - 20599483
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagag--tgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||| ||||| |||  |||||| |||||  |||| ||||||||||||||  |||||||| ||||||||||||  ||||||| || ||| |||||| ||    
T  20599368 ttataaataagaggacatataaactcattgccttaacgttttgggtaagagagtgtggtgtctctcttgcttgtatggttgttttaaccttgatgtgaac 20599467  T
Q  100 agtctcccaagctccc 115  Q
     ||||| | |||||||    
T  20599468 ggtctctcgagctccc 20599483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 41910652 - 41910580
Alignment:
Q  40 ttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagct 112  Q
    |||| ||||||||||||||||||||||  |  ||| |||||||||| |||||||||||||  |||||| ||||    
T  41910652 tttttggtaagagtgtggtgtttctctcacaagtgtggttgttctaacctcgatgtggacgatctcccgagct 41910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 21416232 - 21416181
Alignment:
Q  15 gacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctct 66  Q
    ||||||||||| |||||  ||| ||||||||||||||||||||||| |||||    
T  21416232 gacccataaacccattgccttagggttttgggtaagagtgtggtgtctctct 21416181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 40094503 - 40094389
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctccc 115  Q
    |||||||||| ||||   |||| ||||||||||||||||||  || | |||| ||| || ||||||||||||| |||||| | |  || ||||| || ||    
T  40094503 acccataaactcattactttaaagttttgggtaagagtgtgacgtctttcttacttatgtggttgttctagccccgatgtagtcgatcccccaaact-cc 40094405  T
Q  116 ccaatgacccaacaag 131  Q
    ||||||||||||||||    
T  40094404 ccaatgacccaacaag 40094389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 8802568 - 8802614
Alignment:
Q  16 acccataaacacattgtgttaaggttttgggtaagagtgtggtgttt 62  Q
    |||||||||| || ||| ||||| |||||||||||||||||||||||    
T  8802568 acccataaactcactgttttaagattttgggtaagagtgtggtgttt 8802614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 36623014 - 36623140
Alignment:
Q  2 ttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacag 101  Q
    ||||||||| || || |||||||  |||||  ||||||||||||||| |||| |||||  |||||| |||||| | |||||||  ||| ||||||||| |    
T  36623014 ttataagtaggaggatccataaatccattgccttaaggttttgggtaggagtatggtgcctctcttacttgtgtgattgttctgaccttgatgtggacgg 36623113  T
Q  102 tctcccaagctcccccaatgacccaac 128  Q
    || |   ||||||||  ||||||||||    
T  36623114 tcccttgagctcccctcatgacccaac 36623140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 619 - 491
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    ||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| | ||||||||| | |||| ||||||||||||||||||      
T  619 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctttcttgcttgagtggtttttctagcctcgatgtggaag 520  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||| ||| |||| ||||| ||||||||||    
T  519 gtcccccgagcttccccagtgacccaaca 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 208 - 123
Alignment:
Q  45 ggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggacagtctcccaagctcccccaatgacccaacaa 130  Q
    ||||||| |||||||| ||||||||||| | |||||||||||||||||||||||| ||| ||| |||| | | | |||||||||||    
T  208 ggtaagaatgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggacggtcccccgagcttctctagtgacccaacaa 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 1211 - 1083
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggaca 100  Q
    |||||||| || | ||| ||||||| |||||  |||||||||||||||||||| |||||| ||||||| || || ||||||||||||||||||||||||     
T  1211 cttataagaaaaaggactcataaacccattgccttaaggttttgggtaagagtatggtgtctctcttgtttatgtggttgttctagcctcgatgtggacg 1112  T
Q  101 gtctcccaagctcccccaatgacccaaca 129  Q
    ||  |||||||||||||| ||||||||||    
T  1111 gttccccaagctcccccagtgacccaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 1796 - 1660
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgct--------tgtgcggttgttctagcctcga 92  Q
    ||||||||| ||| ||||||||||| |||||  |||||||||| |||||||||||||||| |||||  ||         ||| |||||||||||||||||    
T  1796 cttataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctctctctctcacacaagtgtggttgttctagcctcga 1697  T
Q  93 tgtggacagtctcccaagctcccccaatgacccaaca 129  Q
    ||||| ||||| ||| ||||||||   ||||||||||    
T  1696 tgtgggcagtccccctagctcccctcgtgacccaaca 1660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5035 - 5133
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    ||||||||||| | ||||||||||| |||||  ||| ||||||||||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||    
T  5035 cttataagtaaaaagacccataaactcattgccttatggttttgggtaagagtgtggtgtctctctcgcttatgcggttgctctagcctcgatgtggac 5133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5410 - 5477
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttg 68  Q
    ||||||||||||| ||||||||||| |||||  ||||| |||||| |||||||||||||| |||||||    
T  5410 cttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggtgtctctcttg 5477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 5449 - 5546
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggtttt-gggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtgg 97  Q
    ||||||||||||| | |||||||||| ||||| |||| ||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  5449 cttataagtaagagggcccataaacatattgtcttaaagtttttgggtaagagtgtggtgtctctcttgcttgtggggttgttcaagcctcgatgtgg 5546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 47413 - 47511
Alignment:
Q  1 cttataagtaagatgacccataaacacattgtgttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttgttctagcctcgatgtggac 99  Q
    |||||||||||||  | |||||||| |||||  |||| ||||||||||| | |||||||| ||||||||||| |||||||||||| |||||||||||||    
T  47413 cttataagtaagagaatccataaacccattgccttaaagttttgggtaaaaatgtggtgtctctcttgcttgcgcggttgttctaacctcgatgtggac 47511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University