View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15659_high_45 (Length: 264)
Name: NF15659_high_45
Description: NF15659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15659_high_45 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 55004329 - 55004092
Alignment:
| Q |
11 |
cagagacggttggacaaatttatttcattctcataatgtttgattaatgtcaaaacaaacaattacaaaggtgttccaacatttgattagataaaattat |
110 |
Q |
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| T |
55004329 |
cagagacggttggacaaatttatttcattctcataatgtttgattaatgtcaaaacaaacaattacaaaggtgttccaaaatttgattagataaaattat |
55004230 |
T |
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| Q |
111 |
aataagatgccagagtaacaaaattgataacaattaccttattgctgttgacaaggcctctatgtgacttttcatgtactttattctcttaaaatcatta |
210 |
Q |
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| T |
55004229 |
aataagatgccagagtaacaaaattgataacaattaccttattgctgttgacaaggcctctatgtgacttttcatgtactttattctcttaaaatcatta |
55004130 |
T |
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| Q |
211 |
agttgatcttccaaagtgagattttgatcatcttgttg |
248 |
Q |
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| T |
55004129 |
agttgatcttccaaagtgagattttgatcatcttgttg |
55004092 |
T |
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