View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15659_high_59 (Length: 238)
Name: NF15659_high_59
Description: NF15659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15659_high_59 |
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Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 29787921 - 29788141
Alignment:
| Q |
1 |
ttcttaggccttcatgcatttggaatgtaatctctttagccacttctatggattcaagtacattatcatctccatttccttgatagaaactttgaggcga |
100 |
Q |
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|||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
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| T |
29787921 |
ttcttaggccttcatgcatttggagtgtaatctcttttgctacttctatggattcaagtacattagcatctccatttccctgatagaaactttgaggcga |
29788020 |
T |
|
| Q |
101 |
tggatttgttggagaaaccaaagccttaagttcatttgttctcccaggactaggcttcaataccactattcgagtagattccggagagtatccataattc |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29788021 |
tggatttgttggagaaaccaaagccttaagatcatttgttctcccaggactaggcttcaataccactattcgagtagattccggagagtatccataattc |
29788120 |
T |
|
| Q |
201 |
ctgttctcccatacagctgct |
221 |
Q |
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||||||||||||||||||||| |
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| T |
29788121 |
ctgttctcccatacagctgct |
29788141 |
T |
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