View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15659_high_65 (Length: 227)
Name: NF15659_high_65
Description: NF15659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15659_high_65 |
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Alignment Details
Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 39304699 - 39304771
Alignment:
| Q |
12 |
gaagaatatgtggaaccattaaaatgttaccttcaaaaatatagagatattgaaggtgagaaagttaatgttc |
84 |
Q |
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| T |
39304699 |
gaagaatatgtggaaccattaaaatgttaccttcaaaaatatagagatattgaaggtgagaaagttaatgttc |
39304771 |
T |
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Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 39304828 - 39304888
Alignment:
| Q |
147 |
gatgaattaaataatcaacatttcaacaatagtgtatatacatctacaaatctcatgtctc |
207 |
Q |
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| T |
39304828 |
gatgaattaaataatcaacatttcaacaatagtgtatatacatctacaaatctcatgtctc |
39304888 |
T |
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