View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15659_low_2 (Length: 986)
Name: NF15659_low_2
Description: NF15659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15659_low_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 800; Significance: 0; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 800; E-Value: 0
Query Start/End: Original strand, 44 - 980
Target Start/End: Original strand, 4009025 - 4009971
Alignment:
| Q |
44 |
ttccatcatgaaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgct |
143 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4009025 |
ttccaccatgaaaatccaaaaatagcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgatcgctgacaagtctacacgtatgct |
4009124 |
T |
|
| Q |
144 |
tctaatagcatcagtgccctgccattgatgtaaaagaaaatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattatacct |
243 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
4009125 |
tctaataacatcagtgccctgccattaatgtaaaagaaaatcaaaatactttttaccaaaatgacaaatgttatctaaaattgccaaatatattttacct |
4009224 |
T |
|
| Q |
244 |
tgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccat |
343 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4009225 |
tgtcgtttttcaatacatcatagataatatcaggatcccatagttgactgcattttataggatcttcactagattcttaacgaacaacctcccgacccat |
4009324 |
T |
|
| Q |
344 |
ttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatca |
443 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009325 |
ttcttgtagaatgtcatgcatagatattacattatcttcagaaattgttataagagctttatcttttaacctttctaacccaatagccactgcattatca |
4009424 |
T |
|
| Q |
444 |
ctttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgat |
543 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009425 |
ctttcaaaatctttcaataaaagtttcatgcaatccactttcaacctcaacccgttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgat |
4009524 |
T |
|
| Q |
544 |
caagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttcc |
633 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
4009525 |
caagatcatcataactgagcctcattacatcttgaatttttttattcggcagtcttttaagtttgtccagctgactttcccattcttccttgtcttttcc |
4009624 |
T |
|
| Q |
634 |
acgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactt |
733 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009625 |
acgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccactttctttgatagatcatagtactccatttcaagatgactt |
4009724 |
T |
|
| Q |
734 |
tgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagta |
833 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009725 |
tgtttaaaggcattcaaattgaaaagctcaagtgcttcactagaatccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagta |
4009824 |
T |
|
| Q |
834 |
cttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatc |
933 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4009825 |
cttgcttatctctagttgttaaaattattctactatcggatcgaaaccaatcaagagttctaaataacatctctagctgaccttcttccttaacatcatc |
4009924 |
T |
|
| Q |
934 |
aagaacaataagaaccttcatacgaccaatccttctcacagtataat |
980 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009925 |
aagaacaataagaaccttcatacgaccaatccttctcacagtataat |
4009971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 614; E-Value: 0
Query Start/End: Original strand, 53 - 930
Target Start/End: Complemental strand, 3956574 - 3955693
Alignment:
| Q |
53 |
gaaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagc |
152 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||| || ||||||||||||||| |
|
|
| T |
3956574 |
gaaaatccaaaaactgcaggttggtcatcttatcaaatacattggggcttaacttcagtttcctacttgctgacaagtctagacttatgcttctaatagc |
3956475 |
T |
|
| Q |
153 |
atcagtgccctgccattgatgtaaaagaaaatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttt |
252 |
Q |
| |
|
|||||| ||||| |||| |||||||||||||||||||||||||| |||| || |||||||||||||||||| ||||||||| || ||||||||| |||| |
|
|
| T |
3956474 |
atcagtaccctgtcattaatgtaaaagaaaatcaaaatatttttcaccagaaagacaaatgttatctaaaattgccaaatattttttaccttgtcatttt |
3956375 |
T |
|
| Q |
253 |
tcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtag |
352 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3956374 |
tcaatacatcatagataatatcaggattggataatcgactgcattttctagggtcttcactggattcttggcgaacaacctcccgacccatttcttgtag |
3956275 |
T |
|
| Q |
353 |
aatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaa |
452 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
3956274 |
aatgtcatgcatggatataacattatcttcagaaattgttataagagatttatctttcaacctttctaaaccaacagccactgcattatcactttcaaaa |
3956175 |
T |
|
| Q |
453 |
tctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcat |
552 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3956174 |
tctttcaataaaagtttcatgtaatccactttcaacctcaacccgttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcat |
3956075 |
T |
|
| Q |
553 |
cataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtag |
642 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
3956074 |
cataactgagcctcattacatcttgaaattttttatttggcagtcttttaagtttgtccagctgactttcccattcttccttgtcttttccacgaagcag |
3955975 |
T |
|
| Q |
643 |
atgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaag |
742 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
3955974 |
atgagccaaaactttaagaactaatggaattcctttggcataatcgatcaccttctttgaaagctcatagtactccatttcaagatgactttgattaaag |
3955875 |
T |
|
| Q |
743 |
gcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttat |
842 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| | | || ||||||||| | ||||| |||| ||||||||||||| ||||||||||||||| | |
|
|
| T |
3955874 |
gcattcaaattgaaaagctcaagtgcttcgctataattcagtaccccaacttcatatatatca------tcaacttcattagtaataagtacttgcttgt |
3955781 |
T |
|
| Q |
843 |
ctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatc |
930 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| |
|
|
| T |
3955780 |
ctctaattgttacaattattctactatcagatcgaaaccaatcaagagttccaaataaaatctctagttgattttcttccttaacatc |
3955693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 50 - 969
Target Start/End: Original strand, 3800609 - 3801550
Alignment:
| Q |
50 |
catgaaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaat |
149 |
Q |
| |
|
|||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| |
|
|
| T |
3800609 |
catgaaaatccaaatatcgcaagttggtcatcttagcaaatacatgagggcttaacttcagcttcctaaatgatgacaagtctacacgtatgcttctaat |
3800708 |
T |
|
| Q |
150 |
agcatcagtgccctgccattgatgtaaaagaaaa-----------tcaaa---atattttttaccaaaattacaaatgttatctaaaatcgccaaatata |
235 |
Q |
| |
|
||||||||| |||| ||||| | ||||||||||| | ||| |||||||| |||||||| ||| ||||||||| |||| ||||||||| |
|
|
| T |
3800709 |
agcatcagtaccctaccattaacgtaaaagaaaaatttcaatcattgaaagccatatttttaaccaaaataacatatgttatctgaaatagccaaatatt |
3800808 |
T |
|
| Q |
236 |
ttataccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcc |
335 |
Q |
| |
|
|| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
3800809 |
ttttaccttgtcatttttcaatacatcatagataatatcaggatcccataaatgactgcattttctagggtcttcactatattcttggcgaacaacctcc |
3800908 |
T |
|
| Q |
336 |
cgacccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactg |
435 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
3800909 |
cgacccatttctcatagaatgtcatgcatagatataacattatcg--agaaatagttataagagctttatcttttaacctttctaacccaacagccactg |
3801006 |
T |
|
| Q |
436 |
cattatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctc |
535 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
3801007 |
aattatcactttcacaatctttcagtaaaattttcatgtaatccactttcaaattcaacccattgaagaaacatgcaatatctaaaaaatactttttctc |
3801106 |
T |
|
| Q |
536 |
taaacgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tg |
625 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||| |||| || || | |||||||||||| ||||||||| ||| |||||||| | |
|
|
| T |
3801107 |
taaatgatcaagatcatcataactgagtctcattacatcatgaacttcttgaattggcagtcttttaagtttgtctagcagactttcccatacttcttta |
3801206 |
T |
|
| Q |
626 |
tcttttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaa |
725 |
Q |
| |
|
|||||||||||| | |||||||||||||| |||||||||||||| |||||||||||| |||| |||| |||||||||| |||||||||||||||||| |
|
|
| T |
3801207 |
cattttccacgaagcatatgagccaaaactttaagaactaatggaactcctttggcatattcgatcaccctctttgatagctcatagtactccatttcag |
3801306 |
T |
|
| Q |
726 |
gatgactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagc |
825 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| || | |||||||||| |
|
|
| T |
3801307 |
gatgactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagaatccaataccccaacctcatatagatcatcgtcatacacttcattagg |
3801406 |
T |
|
| Q |
826 |
aataagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttcctta |
925 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
3801407 |
aataagtacttgcttatctctacttgttacaattattctactatcagattgaaaccaatcaagagttccaaataacatctctagcagaccttcttcctta |
3801506 |
T |
|
| Q |
926 |
acatcatcaagaacaataagaaccttcatacgaccaatccttct |
969 |
Q |
| |
|
| |||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
3801507 |
atatcatcaagatcaataagaaccttcatacggccaatccttct |
3801550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 54 - 954
Target Start/End: Complemental strand, 3920833 - 3919919
Alignment:
| Q |
54 |
aaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagca |
153 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| || || | |||| ||||||||||||||| |||||| |
|
|
| T |
3920833 |
aaaatccaaaaattggaggttggtcatcttatcaaatacatgagggcttaactttagcttcctattttctaagaagtttacacgtatgcttctgatagca |
3920734 |
T |
|
| Q |
154 |
tcagtgccctgccattgatgtaaaagaaaatcaaaatat----tttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgt |
249 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||| ||||||||||||| || | |||||||| ||| |||| ||| | ||||||||| | |
|
|
| T |
3920733 |
tcagaaccctgccattaatgtaaaagaaaatcaaaatatatactttttaccaaaatgactattgttatctgaaaatgccatataatgtttaccttgtcat |
3920634 |
T |
|
| Q |
250 |
ttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttg |
349 |
Q |
| |
|
|||||||||||||| | || |||| ||||||||||||||||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
3920633 |
ttttcaatacatcacaaatgtcatcaacatcccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctcccgacccatttcttg |
3920534 |
T |
|
| Q |
350 |
tagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttca |
449 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||| |||||| ||||||||| ||| |
|
|
| T |
3920533 |
tagaatgtcatgcatagatataacattatcttcagaaatagttataagagctttatctttcaagctttctaacccaccagccacgtaattatcactatca |
3920434 |
T |
|
| Q |
450 |
aaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagat |
549 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3920433 |
caatctttcaataaatgtttcatgtaatccactttcaaattcaacccattgaagaaacatgcaatatctaaaaaatactttttctctaaacgatcaagat |
3920334 |
T |
|
| Q |
550 |
catcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaag |
639 |
Q |
| |
|
||||||||||||| ||| |||||| |||| ||||| | ||||||||||| ||||||||| |||||||||||| ||| |||||||||||| |
|
|
| T |
3920333 |
catcataactgagtttcactacatcatgaactttttgaactggcagtcttttaagtttgtctagctgactttcccatacttctttgttttttccacgaag |
3920234 |
T |
|
| Q |
640 |
tagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgttta |
739 |
Q |
| |
|
| |||||||||||||| |||||||||||||| |||||||||||| |||| |||| |||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
3920233 |
catatgagccaaaactttaagaactaatggaactcctttggcatattcgatcaccctctttgatagctcatagtactccatttcaggatgactttgttta |
3920134 |
T |
|
| Q |
740 |
aaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgct |
839 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |||||| ||||||||||||| | |||||||||| |
|
|
| T |
3920133 |
aaggcattcaaattgaaaagctcaagtgcttcactagaatccaataccctaacctcatatagaccatcatgatcaacttcattagtccttagtacttgct |
3920034 |
T |
|
| Q |
840 |
tatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctga-ctttcttccttaacatcatcaagaa |
938 |
Q |
| |
|
||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || || ||||| ||||||||||||| |
|
|
| T |
3920033 |
tatctctggatgttagaattattctactatcagattgaaaccaatcaagagttccaaataacatctcgagctgatctgtc-tccttgacatcatcaagaa |
3919935 |
T |
|
| Q |
939 |
caataagaaccttcat |
954 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
3919934 |
cgataagaaccttcat |
3919919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 54 - 954
Target Start/End: Complemental strand, 3934054 - 3933143
Alignment:
| Q |
54 |
aaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagca |
153 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| || || | |||||||||||||||||||| |||||| |
|
|
| T |
3934054 |
aaaattcaaaaattggaggttggtcatcttatcaaatacatgagggcttaactttagcttcctattttctaagaagtctacacgtatgcttctgatagca |
3933955 |
T |
|
| Q |
154 |
tcagtgccctgccattgatgtaaaagaaaatcaaaatat----tttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgt |
249 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||| ||||||||||||| || | |||||||| ||| |||| ||| | ||||||||| | |
|
|
| T |
3933954 |
tcagaaccctgccattaatgtaaaagaaaatcaaaatatatactttttaccaaaatgactattgttatctgaaaatgccatataatgtttaccttgtcat |
3933855 |
T |
|
| Q |
250 |
ttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttg |
349 |
Q |
| |
|
|||||||||||||| | || |||| ||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
3933854 |
ttttcaatacatcaaaaatgtcatcaacatcccataatcgactgcattttccaaggtc---actagattcttgccgaacaacctcccaacccatttcttg |
3933758 |
T |
|
| Q |
350 |
tagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttca |
449 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |||||| ||||||||| ||| |
|
|
| T |
3933757 |
aagaatgtcatgcatagatataacattatcttcagaaatagttataagagctttatctttcaacgtttctaacccaccagccacgtaattatcactatca |
3933658 |
T |
|
| Q |
450 |
aaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagat |
549 |
Q |
| |
|
||||||||| |||| ||||||||||||||| || ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3933657 |
caatctttcaataaatgtttcatgtaatccaattccaaatccaacccattgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagat |
3933558 |
T |
|
| Q |
550 |
catcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaag |
639 |
Q |
| |
|
|||||||||| |||||||||||||| |||| |||| | |||||||||||| ||||||||| |||| ||||||| | |||||||||||| |
|
|
| T |
3933557 |
catcataactaagcctcattacatcatgaacttttggaattggcagtcttttaagtttgtctagcttactttcccatacttctttacattttccacgaag |
3933458 |
T |
|
| Q |
640 |
tagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgttta |
739 |
Q |
| |
|
| |||||||||||||| |||||||||||||| |||||||||||| |||| |||| ||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3933457 |
catatgagccaaaactttaagaactaatggaactcctttggcatattcgatcaccctctctgatagctcatagtactccatttcaagatgactttgttta |
3933358 |
T |
|
| Q |
740 |
aaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgct |
839 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | |||||||||||| ||||||||||| | || ||| ||||||| |
|
|
| T |
3933357 |
aaggcattcaaattgaaaagctcaagtgcttcactagaatccaataccctaacctcacatagatcatcattatcaacttcattggtaacaagcacttgct |
3933258 |
T |
|
| Q |
840 |
tatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatcaagaac |
939 |
Q |
| |
|
||| |||| | |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || | ||| || |||||||||||||| |
|
|
| T |
3933257 |
tatttctactggttacaattattctactatctaatcgaaaccaatcaagagatccaaataacatctctagcagatctgtttcattgacatcatcaagaac |
3933158 |
T |
|
| Q |
940 |
aataagaaccttcat |
954 |
Q |
| |
|
||||||||| ||||| |
|
|
| T |
3933157 |
aataagaactttcat |
3933143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 53 - 979
Target Start/End: Original strand, 4024257 - 4025200
Alignment:
| Q |
53 |
gaaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagc |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||| || || ||||||||||||||| ||||||||||||| | |
|
|
| T |
4024257 |
gaaaatccaaaaattgcaggttggtcatcttagcaaatgcatgagagcttaacatcagctttcttcttcctgacaagtctacacttatgcttctaataac |
4024356 |
T |
|
| Q |
153 |
atcagtgccctgccattgatgtaaaagaaaa--tcaaaat-------------attttttaccaaaattacaaatgttatctaaaatcgccaaatatatt |
237 |
Q |
| |
|
|||||| ||||| ||| |||||| |||||| | ||||| |||||| ||||||| ||||| || ||||||| | | ||| || |
|
|
| T |
4024357 |
atcagtaccctg-catgaatgtaagagaaaaatttaaaattagttaaagccgtatttttagccaaaatgacaaacgtcgtctaaaaatacgtattatgtt |
4024455 |
T |
|
| Q |
238 |
ataccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccg |
337 |
Q |
| |
|
||||||||| |||| |||||||||| | || |||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
4024456 |
-taccttgtcattttccaatacatcacaaatgtcatcatgatcccataatcgactgcgttttctagggtctgcactagattcttggcgaacaacctcccg |
4024554 |
T |
|
| Q |
338 |
acccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgca |
437 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||| |||| |||||||| | |
|
|
| T |
4024555 |
acccatttcttgtagaatgtcatgcatagatataatattatcttcagaaatagttataagagctttatctctcaacctttctaaaccaacagccactgaa |
4024654 |
T |
|
| Q |
438 |
ttatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctcta |
537 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4024655 |
ttatcgctttcacaatctttcaataaaagtttcatgtaatccactttcaaattcaacccgttgaagaaacatgcaatatctaaaaaatactttttctcta |
4024754 |
T |
|
| Q |
538 |
aacgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtc |
627 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||| |||| ||||| | ||||||||||| ||||||||| |||||||||||| | | |
|
|
| T |
4024755 |
aacgatcaagatcatcataacttagtctcattacatcatgaactttttgaactggcagtcttttaagtttgtctagctgactttcccatacttctttatt |
4024854 |
T |
|
| Q |
628 |
ttttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaaga |
727 |
Q |
| |
|
|||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| || |||||||| |
|
|
| T |
4024855 |
ttttccacgaagcatatgagccaaaactttaagaactaatggaattcctttggcataatcgatcaccttctttgatagctcaaagtacaccgtttcaaga |
4024954 |
T |
|
| Q |
728 |
tgactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaa |
827 |
Q |
| |
|
|||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||| || |
|
|
| T |
4024955 |
tgacgttgtttaaatgcattcaagttgaaaagctcaagtgcttcactagaatccaataccccaacctcatata------catgatcaacttcattacaaa |
4025048 |
T |
|
| Q |
828 |
taagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaac |
927 |
Q |
| |
|
||||||||||| | ||||||||||| | |||||| |||||||||||| ||| ||||||||| ||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
4025049 |
taagtacttgcatgtctctagttgtgacaattatcctactatcagatagaagccaatcaagtgttccaaataacatctctatctgaccttcttccttaac |
4025148 |
T |
|
| Q |
928 |
atcatcaagaacaataagaaccttcatacgaccaatccttctcacagtataa |
979 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||| || ||||| |
|
|
| T |
4025149 |
gtcatcaagaacaataaggaccttcatacggccaatccttctctcaatataa |
4025200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 54 - 963
Target Start/End: Original strand, 3986022 - 3986953
Alignment:
| Q |
54 |
aaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagca |
153 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| || || |||||||||||||||| |
|
|
| T |
3986022 |
aaaatccaaaaatttcaggttcgtcatcttagcaaatacatcagggcttaacttcagcttcctaattgctgacaagtttagacatatgcttctaatagca |
3986121 |
T |
|
| Q |
154 |
tcagtgccctgccattgatgtaaaagaaaat-caaaat-------------attttttaccaaaattacaaatgttatctaaaatcgccaaatatattat |
239 |
Q |
| |
|
||||| ||||| ||| ||| |||||||||| | |||| ||||| |||||||| ||||||||||| |||| || | ||| |||| |
|
|
| T |
3986122 |
tcagtaccctgtcatgaatggaaaagaaaattctaaatcattgaaagacacattttaaaccaaaataacaaatgttatgtaaagatgcta--tattttat |
3986219 |
T |
|
| Q |
240 |
accttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgac |
339 |
Q |
| |
|
|||||||| ||||| || ||||| | || |||| |||||||||||||||||| ||| | |||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
3986220 |
accttgtcattttttaagacatcgcaaatttcatcatgatcccataatcgactgcgtttgtttgggtattcactagattcttggcgaacaacctcccgac |
3986319 |
T |
|
| Q |
340 |
ccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcatt |
439 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||| |||||||| ||| |
|
|
| T |
3986320 |
ccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagttatgagagctttatctttcaacctttctatcccaacagccactgaatt |
3986419 |
T |
|
| Q |
440 |
atcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaa |
539 |
Q |
| |
|
||||| |||| ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
3986420 |
atcaccttcacaatctttcaataaaagtttcatgtaatccactttcaaactcaacccattgaagaaacatgcaatatctaaaaaatactttttctctaaa |
3986519 |
T |
|
| Q |
540 |
cgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtctt |
629 |
Q |
| |
|
|||||||||||||| |||||||| ||| |||||| |||| ||||||| ||||||||||| ||||||||| |||||||||||| ||| || |
|
|
| T |
3986520 |
cgatcaagatcatcgtaactgagtttcactacatcatgaacttttttaactggcagtcttttaagtttgtctagctgactttcccatacttctttgtttt |
3986619 |
T |
|
| Q |
630 |
ttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatg |
729 |
Q |
| |
|
|||||||||| | |||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||| |||| |||| |||||||||| |
|
|
| T |
3986620 |
ttccacgaagcatatgagccaaaactttaagaactaatggatttcctttggcataattgaccaccctctttgatatttcatcaaactcagtttcaagatg |
3986719 |
T |
|
| Q |
730 |
actttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaata |
829 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||| |||||||||| |||||||||||| ||| | |
|
|
| T |
3986720 |
actttgtttaaaggcattcaaattgaaaagtgcaagtgcatcactagaatccaataccccaacctcatatcgatcatcatcgtcaacttcattatcaaaa |
3986819 |
T |
|
| Q |
830 |
agtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacat |
929 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||||| ||| ||||||| ||||||||| | |||||||||||||||||| ||| |||||||||| |
|
|
| T |
3986820 |
agtacttgcttatctctggctgttagaattattctactatctgattgaaaccagtcaagagtttcgaataacatctctagctgatcttcgtccttaacat |
3986919 |
T |
|
| Q |
930 |
catcaagaacaataagaaccttcatacgaccaat |
963 |
Q |
| |
|
||||||||| |||||||||||||| || ||||| |
|
|
| T |
3986920 |
catcaagaatgataagaaccttcatgcgtccaat |
3986953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 55 - 964
Target Start/End: Original strand, 4001320 - 4002258
Alignment:
| Q |
55 |
aaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcat |
154 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| |
|
|
| T |
4001320 |
aaatccaaatatcgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctaaatgatgacaagtctacacgtatgcttctaatagcat |
4001419 |
T |
|
| Q |
155 |
cagtgccctgccattgatgtaaaag-aaaat--caaa------------atattttttaccaaaattacaaatgtta----------tctaaaatcgcca |
229 |
Q |
| |
|
|||| |||| ||||| ||||||||| ||||| |||| |||||||| |||||||| ||| ||||| ||||||| ||||| |
|
|
| T |
4001420 |
cagtaccctaccattaatgtaaaagaaaaattacaaatcattgaaagccatatttttaaccaaaatgacatatgtttctaaaaagtttctaaaaacgcca |
4001519 |
T |
|
| Q |
230 |
a-atatattataccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaac |
328 |
Q |
| |
|
|||| || ||||||||| ||||||||||||| | || ||||||||||||||| ||||| | ||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4001520 |
ttatattttttaccttgtcatttttcaatacatagcaaatgtcatcaggatcccataaccgacttcgtttactagggtcttcactagattcttggcgaac |
4001619 |
T |
|
| Q |
329 |
aacctcccgacccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaata |
428 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||| ||||||||| ||||||||||| |||| | |
|
|
| T |
4001620 |
aacctcccgacccatttcttgtaaaatgtcatgcatagatacaacattatatttcgaaatagttataagagctttatctttcaacctttctaaaccaaca |
4001719 |
T |
|
| Q |
429 |
gccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatact |
528 |
Q |
| |
|
|||||| ||| ||||||||| |||| | || | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4001720 |
accactgaattgtcactttcagtctctt--aatagatgtttcatgtaatccactttcaaattcaacccgttgaagaaacatgcaatatctaaaaaatact |
4001817 |
T |
|
| Q |
529 |
tttgctctaaacgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcctgt-- |
626 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| | || ||||||| |||| ||| ||| |||||| || |||||||||||| | |
|
|
| T |
4001818 |
tttgctctaaacgatcaagatcatcataactgagtctcattacatcataaacttttttacttggaagttttttaagtttatcaagctgactttcccatac |
4001917 |
T |
|
| Q |
627 |
--------cttttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactcc |
718 |
Q |
| |
|
||||||||||||||| |||||||||||||| || | |||||||||||||||| ||||| | |||||| |||||||||| |||||||||||| |
|
|
| T |
4001918 |
ttccttaacttttccacgaagtaaatgagccaaaactttaacacctaatggaattccttttgcatacgcaaccaccctctttgatagctcatagtactcc |
4002017 |
T |
|
| Q |
719 |
atttcaagatgactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaactt |
818 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||| |||||||| | ||||| |||| ||||||| |
|
|
| T |
4002018 |
atttcaagatgactttgtttaaaggcattcaaatgaaaaagctcaagtgcctcactaggtttcaacaccccaacttcatatatatcaa-----tcaactt |
4002112 |
T |
|
| Q |
819 |
cattagcaataagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttc |
918 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
4002113 |
cattagtaataagtacttgcttgtctctagtcgttacaattatcctactatcggatcgaaaccaatcaagagttccaaataacatctctatttgaccttc |
4002212 |
T |
|
| Q |
919 |
ttccttaacatcatcaagaacaataagaaccttcatacgaccaatc |
964 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4002213 |
ttccttaacatcatcaagaacaataagaaccttcatacggccaatc |
4002258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 239 - 954
Target Start/End: Original strand, 3816823 - 3817545
Alignment:
| Q |
239 |
taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga |
338 |
Q |
| |
|
||||||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| | |||| |||||||||||| ||||||| ||||| | |
|
|
| T |
3816823 |
taccttgtcatttttcaatacatcataaatttcatcaggattccataatcgactgcgttttccaaggtc---actagattcttgccgaacaatctcccaa |
3816919 |
T |
|
| Q |
339 |
cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat |
438 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |||||| || |
|
|
| T |
3816920 |
cccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagttataagagctttatctttcaacgtttctaacccaccagccacgtaat |
3817019 |
T |
|
| Q |
439 |
tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaa |
538 |
Q |
| |
|
||||||| ||| ||||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3817020 |
tatcactatcacaatctttcaataaatgtttcatgtaatccactttcaaatccaacccattgaagaaacatgcaatatctaaaaaatacttttgctctaa |
3817119 |
T |
|
| Q |
539 |
acgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtct |
628 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||| | || ||||| | |||||||||| ||||||||| |||||||||||| | | | |
|
|
| T |
3817120 |
acgatcaagatcatcataactgagtctcattgcatcataaactttttgaactggcagtcttctaagtttgtctagctgactttcccatacttctttcttt |
3817219 |
T |
|
| Q |
629 |
tttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagat |
728 |
Q |
| |
|
||||||||||| | |||||| ||||| | ||||||||| ||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
3817220 |
tttccacgaagcatatgagctaaaaccttaagaactaacggaatccctttggcataattgaccacactctttgatagctcatagtactccatttcaagat |
3817319 |
T |
|
| Q |
729 |
gactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaat |
828 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| | |
|
|
| T |
3817320 |
gactttgtttaaaggcattcgaattgaaaagcacaagtgcttcactagaatccaataccccaacctcatatatatcatcatcttcaacttcattattcct |
3817419 |
T |
|
| Q |
829 |
aagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctga-ctttcttccttaac |
927 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || || ||||| || |
|
|
| T |
3817420 |
tagtacttgcttatctctggatgttagaattattctactatcagattgaaaccaatcaagagttccaaataacatctcgagctgatctgtc-tccttgac |
3817518 |
T |
|
| Q |
928 |
atcatcaagaacaataagaaccttcat |
954 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
3817519 |
atcatcaagaacgataagaaccttcat |
3817545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 239 - 965
Target Start/End: Original strand, 3809237 - 3809976
Alignment:
| Q |
239 |
taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga |
338 |
Q |
| |
|
||||||||| ||||||||||||||||| || |||||||| |||||||||||||| |||| ||||| ||| ||||||||||| ||||| ||||||||| |
|
|
| T |
3809237 |
taccttgtcatttttcaatacatcataaatttcatcaggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctcccga |
3809336 |
T |
|
| Q |
339 |
cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat |
438 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||| || |||||||||||| |||||||| || |
|
|
| T |
3809337 |
cccatttcttgtagaatgtcatgcatagatataacattatattcagaaatagttataagagctttgtctttcaagctttctaacccagcagccactgaat |
3809436 |
T |
|
| Q |
439 |
tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaa |
538 |
Q |
| |
|
||||||| | | ||||||||| ||||||| | |||||| ||||| |||| |||||||| |||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
3809437 |
tatcactgttagaatctttcaataaaagtgttatgtaacccactctcaaactcaacccattgaagaaacatgcaatatctaaaaaatacttcttctctaa |
3809536 |
T |
|
| Q |
539 |
acgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtct |
628 |
Q |
| |
|
| |||||||||||||||||||||| |||||||| | | || || || | |||||||||| ||||||||| |||||||||||| | | | |
|
|
| T |
3809537 |
aggatcaagatcatcataactgagtctcattactttatcaacttcttgaactggcagtcttctaagtttgtctagctgactttcccatacttctttattt |
3809636 |
T |
|
| Q |
629 |
tttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtac---tccatttcaa |
725 |
Q |
| |
|
||||||||||| | || ||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||| |||| | || || | ||||| |
|
|
| T |
3809637 |
tttccacgaagcatattagccaaaactttaagaactaatggaattcctttggcatattcggtcaccctctttgatacatcacaaaactgatcaacttcaa |
3809736 |
T |
|
| Q |
726 |
gatgactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagc |
825 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| | | |||||||| | |||||||||||||| |
|
|
| T |
3809737 |
gatcactttgtttaaaggcattcaaattgaaaagctcaagttcttcagtaggacccaataccccaacctcaaacagatcatctttatcaacttcattagc |
3809836 |
T |
|
| Q |
826 |
aataagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttcctta |
925 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||| || ||||||||||| | |||||||||| | || |||||| | |||| |
|
|
| T |
3809837 |
aataagtacttgcttatctctggctgttaaaattattctactatcatattgaaaccaatcacaacttccaaataatttttccagctgatctgtacccttg |
3809936 |
T |
|
| Q |
926 |
acatcatcaagaacaataagaaccttcatacgaccaatcc |
965 |
Q |
| |
|
|| ||||||||||| |||||||||||||| || ||||||| |
|
|
| T |
3809937 |
acgtcatcaagaacgataagaaccttcatgcggccaatcc |
3809976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 628 - 969
Target Start/End: Original strand, 4218266 - 4218607
Alignment:
| Q |
628 |
ttttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaaga |
727 |
Q |
| |
|
||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
4218266 |
ttttccacgaaacatatgacccaaaactttaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcgtagtacttaatttcaaga |
4218365 |
T |
|
| Q |
728 |
tgactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaa |
827 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||| || ||||| | |||||||||||| | ||||| ||||||||| |||||||||||||||| |
|
|
| T |
4218366 |
tgactttctttaaaggcattcaaattgaaaagcgcaagtgcatcgctagaattcaataccccaacttcatatacatcatcatcatcaacttcattagcaa |
4218465 |
T |
|
| Q |
828 |
taagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaac |
927 |
Q |
| |
|
||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
4218466 |
taagtacttgcttatctctagatgttacaatgattctactatcggatcgaaaccaatcaagagttccaaataacatctctagcagaccttcttccttaat |
4218565 |
T |
|
| Q |
928 |
atcatcaagaacaataagaaccttcatacgaccaatccttct |
969 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4218566 |
atcatcaagaacaataagaaccttcatacggtcaatccttct |
4218607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 272 - 571
Target Start/End: Original strand, 4217897 - 4218196
Alignment:
| Q |
272 |
atcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatata |
371 |
Q |
| |
|
||||||||||||||| ||||| ||| |||||||||| | |||||||| | |||||||||||||||||||| | |||| ||| ||||||||||||||| |
|
|
| T |
4217897 |
atcaggatcccataaccgactttgtttactagggtctttaatagattctaggcgaacaacctcccgacccatcttttgttgaaagtcatgcatagatatt |
4217996 |
T |
|
| Q |
372 |
acattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttca |
471 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
4217997 |
acattatcttcagaaatagtaataagagctttatctttcaacctttctaacccaacggccactgaattatcactttcataatctttcaataaaagtttca |
4218096 |
T |
|
| Q |
472 |
tgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctcattac |
571 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
4218097 |
tgtaatccactttcaaattcaacccattgaagaaacatgcaatatctaaaaaatacttttgctctaagagatcaagatcatcataactgagtctcattac |
4218196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 278 - 767
Target Start/End: Original strand, 4017980 - 4018479
Alignment:
| Q |
278 |
atcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacatta |
377 |
Q |
| |
|
||||||||| ||||| || ||| ||||||| || | |||||||| ||||||| |||| |||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
4017980 |
atcccataaccgactacagcttccagggtctccatttgattcttggcgaacaatttccctacccatttcttgtataatgtcatgcatggatataacatta |
4018079 |
T |
|
| Q |
378 |
tcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaat |
477 |
Q |
| |
|
|||| ||||| || ||||||| ||||||||| ||||||||||||||| | || |||| ||||||||||||| ||||||||| |||| ||| ||||| | |
|
|
| T |
4018080 |
tctttagaaaaagatataagacctttatctttcaacctttctaacccactggctactgaattatcactttcagaatctttcaacaaaaattttatgtagt |
4018179 |
T |
|
| Q |
478 |
ccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctcattacatcttg |
577 |
Q |
| |
|
|||||||||| | | || ||||| |||||||||| |||| ||||| ||||| |||| ||||| |||||||||||||| | ||| |||||||||| |
|
|
| T |
4018180 |
ccactttcaaatttgatccattgaaaaaacatgcaagatctgaaaaaatctttttctctttgcgatccagatcatcataactcaatctcgttacatcttg |
4018279 |
T |
|
| Q |
578 |
aaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtagatgagccaaaacttcaagaactaat |
667 |
Q |
| |
|
|| ||||||| |||||| | ||| ||| ||||| || ||||||||| | |||||||| ||||| |||||||||||||||| |||||||||| |
|
|
| T |
4018280 |
aacttttttacttggcatttttttaagcttgtctagttgactttcccatactagcttatcttttccgcgaagaagatgagccaaaactttaagaactaat |
4018379 |
T |
|
| Q |
668 |
ggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcattcaaattgaaaagctcaagtg |
767 |
Q |
| |
|
||||| ||||||||||||| ||||||| |||||| ||| ||||||||||| |||||||| | | ||| || ||||||||||||||||||||||||| |
|
|
| T |
4018380 |
ggaatgcctttggcataattgaccaccctctttgttagctcatagtactcaatttcaagttccttaactttgaaagcattcaaattgaaaagctcaagtg |
4018479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 239 - 767
Target Start/End: Complemental strand, 3964164 - 3963629
Alignment:
| Q |
239 |
taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga |
338 |
Q |
| |
|
||||||||| ||||| ||||| ||||| ||| ||| ||||||||||||||| | ||| ||||||| |||| |||||||| ||||||| ||||| | |
|
|
| T |
3964164 |
taccttgtcattttttaatacttcata---aatgtcatcatcccataatcgactacggcttccagggtctccacttgattcttggcgaacaatctcccta |
3964068 |
T |
|
| Q |
339 |
cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat |
438 |
Q |
| |
|
||||| ||||||| ||| ||||||||||||||||||||| || ||||| || | |||| ||||||||| ||||||||||||||| | || |||| || |
|
|
| T |
3964067 |
cccatgtcttgtataattccatgcatagatataacattatgtttagaaacagaaacaagatctttatctttcaacctttctaacccactggctactgaat |
3963968 |
T |
|
| Q |
439 |
tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaa |
538 |
Q |
| |
|
||||||||||| |||||||| || ||||| | ||| ||||||||||| || |||| ||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
3963967 |
tatcactttcagaatctttccacaatagttttaggtagtccactttcaaattcgacccattgaaaaaacatgcaatatctaaaaaaatcttttgctcttc |
3963868 |
T |
|
| Q |
539 |
acgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtct |
628 |
Q |
| |
|
||||| |||||||||||||| | |||||||||||||||| ||||||| |||||| | || ||| ||||| || ||||||||| | ||| |
|
|
| T |
3963867 |
gcgatctagatcatcataactcaatctcattacatcttgaacttttttacttggcatttttctaagcttgtctagttgactttcccatactagcttatct |
3963768 |
T |
|
| Q |
629 |
tttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagat |
728 |
Q |
| |
|
||||| || | ||||| |||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||| |||| |||||| |||||||| | |
|
|
| T |
3963767 |
tttccgcggacaagatgcgccaaaactttaagaactaatggaatgcctttggcataattcaccaccctctttgatagctcattgtactcaatttcaagtt |
3963668 |
T |
|
| Q |
729 |
gactttgtttaaaggcattcaaattgaaaagctcaagtg |
767 |
Q |
| |
|
| ||| || ||||||||||||||||||||||||| |
|
|
| T |
3963667 |
ccttacctttgaaagcattcaaattgaaaagctcaagtg |
3963629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 54 - 183
Target Start/End: Original strand, 4217653 - 4217782
Alignment:
| Q |
54 |
aaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagca |
153 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | || |||||||| |||||||||||||||||||||| |
|
|
| T |
4217653 |
aaaattcaaaaatttcaggttggtcatcttagcaaatacatgagggcttaacttcagcatccaaactgatgacaagtttacacgtatgcttctaatagca |
4217752 |
T |
|
| Q |
154 |
tcagtgccctgccattgatgtaaaagaaaa |
183 |
Q |
| |
|
||||| |||| ||||| ||||||||||||| |
|
|
| T |
4217753 |
tcagtaccctaccattaatgtaaaagaaaa |
4217782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 925 - 970
Target Start/End: Complemental strand, 3954611 - 3954566
Alignment:
| Q |
925 |
aacatcatcaagaacaataagaaccttcatacgaccaatccttctc |
970 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3954611 |
aacatcatcaagaacaataagaaccttcatacggccaatccttctc |
3954566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 3809046 - 3809113
Alignment:
| Q |
54 |
aaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattg |
121 |
Q |
| |
|
||||| ||||||| | || |||||||||||| |||||||| |||||||||||| |||||||| |||| |
|
|
| T |
3809046 |
aaaatacaaaaatcgaagtttggtcatcttatcaaatacacgagggcttaactcgagcttcctcattg |
3809113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 3816640 - 3816694
Alignment:
| Q |
68 |
gcaggttggtcatcttagcaaa-tacatgagggcttaacttcagcttcctgattg |
121 |
Q |
| |
|
||||||||||||||||| |||| ||||||| ||||||||||||||| ||| |||| |
|
|
| T |
3816640 |
gcaggttggtcatcttatcaaaatacatgacggcttaacttcagctccctcattg |
3816694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 599; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 599; E-Value: 0
Query Start/End: Original strand, 48 - 970
Target Start/End: Original strand, 13396981 - 13397915
Alignment:
| Q |
48 |
atcatgaaaatccaaaaattgcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttcta |
147 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
13396981 |
atcatgaaaatacaaaaatttcaggttggtcatcttatcaaatacaggcgggcttaacttcagcttcctaattgctgacaagtctacacttatgcttcta |
13397080 |
T |
|
| Q |
148 |
atagcatcagtgccctgccattgatgtaaaagaaaatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtc |
247 |
Q |
| |
|
||||||||||| ||||| |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | || ||||||||| |
|
|
| T |
13397081 |
atagcatcagtaccctgtcattattataaaagaaaatcaaaatattttttaccaaaatgacaaatgttatctaaaattgccaaatttttt-taccttgtc |
13397179 |
T |
|
| Q |
248 |
gtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttct |
347 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
13397180 |
atttttcaatacatcgtagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttggcgaacaacctcgcgacccatttcc |
13397279 |
T |
|
| Q |
348 |
tgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcacttt |
447 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| || | ||||||||||| |
|
|
| T |
13397280 |
tgtagaatgtcatgcatagatataacattatctttagaaatagttataagagctttatctttcaacctttctaacccaatagctacagaattatcacttt |
13397379 |
T |
|
| Q |
448 |
caaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaag |
547 |
Q |
| |
|
|| ||||||||| ||||||||||||||| ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13397380 |
cataatctttcaataaaagtttcatgtactccactttcaaactcatcccgttgaagaaacatgcaatatctaaaaaatacttctgctctaaacgatcaag |
13397479 |
T |
|
| Q |
548 |
atcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacga |
637 |
Q |
| |
|
||||||| ||||||| ||||||||||| |||| ||||| | |||||||||||| ||||||||| |||||||||||| | | ||||||||| |
|
|
| T |
13397480 |
atcatcaaaactgagtctcattacatcatgaactttttgaattggcagtcttttaagtttgtctagctgactttcccatagttctttattctttccacga |
13397579 |
T |
|
| Q |
638 |
agtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtt |
737 |
Q |
| |
|
|| | |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
13397580 |
agcatatgagccaaaactttaagaactaatgggattcctttggcataatcgaccaccctctttgatacatcataaaactcgttttcaagatgactttgtt |
13397679 |
T |
|
| Q |
738 |
taaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatata---gatcatcatcttcaacttcattagcaataagtac |
834 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
13397680 |
taaaggcattcaaattgaaaagcgcaagtgcttcactagaatccaataccctaacctcatataaagcatcatcatcaacaacttcattagcaataagtac |
13397779 |
T |
|
| Q |
835 |
ttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatca |
934 |
Q |
| |
|
||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |
|
|
| T |
13397780 |
ttgcttatccctggttgttataattattctactatcagatcgaaaccaatcaagagttccaaataacatctccagctgaccttcttccgtaacatcatca |
13397879 |
T |
|
| Q |
935 |
agaacaataagaaccttcatacgaccaatccttctc |
970 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||| |
|
|
| T |
13397880 |
agaacaataagaaccttcatatggccaatccttctc |
13397915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 418
Target Start/End: Original strand, 7074735 - 7074914
Alignment:
| Q |
239 |
taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga |
338 |
Q |
| |
|
||||||||| | ||||||||||| ||| || |||||||||| ||| ||| || | |||| ||| |||||| ||||||||| ||||||| ||||| | |
|
|
| T |
7074735 |
taccttgtcatctttcaatacatgataaatgtcatcaggatccaatagtcggcttcggtttccaggttcttcaacagattcttggcgaacaatctcccta |
7074834 |
T |
|
| Q |
339 |
cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttc |
418 |
Q |
| |
|
| ||||||||| |||||||||||| |||| || | | || ||||||||||| ||||| ||||||||||| |||||| |
|
|
| T |
7074835 |
gctgtttcttgtataatgtcatgcattgatacaatgctttgttgagaaatagttacaagagctttatcttttagcctttc |
7074914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 832 - 959
Target Start/End: Original strand, 7081381 - 7081508
Alignment:
| Q |
832 |
tacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatca |
931 |
Q |
| |
|
||||||||||||| ||||||||| ||| ||||||||| | | || |||||||||||| ||||||| ||| || |||| || | ||||| ||||| |
|
|
| T |
7081381 |
tacttgcttatctttagttgttacaatgattctactacctgttccaaaccaatcaagtgttccaattaaaatttctaattgttgtggatccttgacatcg |
7081480 |
T |
|
| Q |
932 |
tcaagaacaataagaaccttcatacgac |
959 |
Q |
| |
|
|||||||||| ||||||||||||||||| |
|
|
| T |
7081481 |
tcaagaacaacaagaaccttcatacgac |
7081508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 833 - 966
Target Start/End: Original strand, 7092768 - 7092901
Alignment:
| Q |
833 |
acttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcat |
932 |
Q |
| |
|
||||| |||||| ||||||||| ||| ||||||||||| | || ||||||||||| ||||||| ||| | |||| || | | || || ||||| | |
|
|
| T |
7092768 |
acttgtttatctttagttgttataatgattctactatctgttcctaaccaatcaagtgttccaattaaagtttctacttgtcgtgaatcattgacatcgt |
7092867 |
T |
|
| Q |
933 |
caagaacaataagaaccttcatacgaccaatcct |
966 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
7092868 |
caagaacaataagaaccttcatacgacgaatcct |
7092901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 682 - 729
Target Start/End: Complemental strand, 7031071 - 7031024
Alignment:
| Q |
682 |
ataatcgaccaccttctttgatagatcatagtactccatttcaagatg |
729 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
7031071 |
ataatcgaccatcttctttgatagctcatagtactccatttcgagatg |
7031024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 682 - 761
Target Start/End: Original strand, 7075182 - 7075264
Alignment:
| Q |
682 |
ataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgt---ttaaaggcattcaaattgaaaagct |
761 |
Q |
| |
|
|||||| |||| ||||||||||| | ||||||||||||||||||||| ||||| |||||||||| ||| |||||||||| |
|
|
| T |
7075182 |
ataatccaccattttctttgatagcttatagtactccatttcaagatgcttttgtttattaaaggcatgcaagttgaaaagct |
7075264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 7036545 - 7036514
Alignment:
| Q |
923 |
ttaacatcatcaagaacaataagaaccttcat |
954 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
7036545 |
ttaacatcatcaagaacaataagaaccttcat |
7036514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 7037123 - 7037045
Alignment:
| Q |
343 |
tttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaa |
421 |
Q |
| |
|
||||||||| |||||||||||| |||| || | | | || ||||||||||| ||||| ||||||||||| ||| ||||| |
|
|
| T |
7037123 |
tttcttgtataatgtcatgcattgatacaataatttattgagaaatagttacaagagctttatcttttagcctgtctaa |
7037045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 833 - 888
Target Start/End: Original strand, 42858671 - 42858726
Alignment:
| Q |
833 |
acttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaag |
888 |
Q |
| |
|
|||||||||||||| ||||||| || ||||||||| |||||| |||||||||||| |
|
|
| T |
42858671 |
acttgcttatctctggttgttacgatgattctactaccagatccaaaccaatcaag |
42858726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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