View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15659_low_50 (Length: 259)
Name: NF15659_low_50
Description: NF15659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15659_low_50 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 33467809 - 33467577
Alignment:
| Q |
14 |
agggggactt-gagccaatcttcttacatcatctctagcctagagacaccagttactataaaaaggtccttctagctcctccaaattgattcaaccagaa |
112 |
Q |
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| T |
33467809 |
agggggactttgagccaatcttcttacatcatctctagcctagagacaccagttactataaaaaggtccttctagctcctccaaattgattcaaccagaa |
33467710 |
T |
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| Q |
113 |
tctatttcaagtaggtgaattgatatttcaaccaaagatcaataggtcagtgaacacacatttggtgatgttgaacccaataccaatcaaatgcttatat |
212 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33467709 |
tctatttcaagcaggtgaattgatatttcaaccaaagatcaataggtcagtgaacacacatttggtgatgttgaacccaataccaatcaaatgcttatat |
33467610 |
T |
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| Q |
213 |
tgttaacatggattaaataaatatgtcgttaat |
245 |
Q |
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| T |
33467609 |
tgttaacatggattaaataaatatgtcgttaat |
33467577 |
T |
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