View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15660_low_6 (Length: 213)
Name: NF15660_low_6
Description: NF15660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15660_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 34270371 - 34270224
Alignment:
| Q |
17 |
catagggaagaacaaaagttgtttgtgcaattaagtgaagctgtacaatgtttgaaacatatatgtacagaaggttgcaccaacgtggcatcatatgatg |
116 |
Q |
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| T |
34270371 |
catagggaagaacaaaagttgtttgtgcaattaagtgaagctgtacaatgtttgaaacatatatgtacagaaggttgcaccaacgtggcatcatatgatg |
34270272 |
T |
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| Q |
117 |
tggagattacggggaggccatgtactaaattctccacatgtcaagctt |
164 |
Q |
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| T |
34270271 |
tggagattacggggaggccgtgtactaaattctccacatgtcaagctt |
34270224 |
T |
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