View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15661_high_6 (Length: 226)

Name: NF15661_high_6
Description: NF15661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15661_high_6
NF15661_high_6
[»] chr6 (14 HSPs)
chr6 (3-84)||(13035998-13036079)
chr6 (3-89)||(6606086-6606172)
chr6 (17-89)||(14783409-14783481)
chr6 (4-84)||(34954613-34954693)
chr6 (3-89)||(5253212-5253298)
chr6 (1-89)||(3601117-3601205)
chr6 (1-89)||(9633614-9633702)
chr6 (1-89)||(10311458-10311546)
chr6 (1-89)||(12635847-12635935)
chr6 (1-89)||(21898681-21898769)
chr6 (1-89)||(29444754-29444842)
chr6 (1-89)||(31129210-31129298)
chr6 (4-90)||(13468969-13469055)
chr6 (1-89)||(3587934-3588022)
[»] chr5 (21 HSPs)
chr5 (17-84)||(7616966-7617033)
chr5 (2-84)||(8513550-8513632)
chr5 (24-90)||(16755102-16755168)
chr5 (1-80)||(9805034-9805113)
chr5 (3-80)||(1538463-1538540)
chr5 (3-80)||(20255401-20255478)
chr5 (1-89)||(20692963-20693051)
chr5 (1-89)||(23383687-23383775)
chr5 (2-89)||(20228748-20228835)
chr5 (1-80)||(42086357-42086436)
chr5 (2-80)||(12766162-12766240)
chr5 (3-89)||(42861207-42861293)
chr5 (3-92)||(19572756-19572845)
chr5 (1-89)||(5731909-5731997)
chr5 (17-89)||(43212494-43212566)
chr5 (1-89)||(43399158-43399246)
chr5 (7-78)||(20525874-20525945)
chr5 (27-89)||(14235703-14235765)
chr5 (3-89)||(39099768-39099854)
chr5 (4-89)||(41163449-41163534)
chr5 (37-89)||(24653801-24653853)
[»] chr8 (13 HSPs)
chr8 (3-89)||(3418502-3418588)
chr8 (1-80)||(8141135-8141214)
chr8 (3-84)||(9859989-9860070)
chr8 (1-89)||(10927639-10927727)
chr8 (1-89)||(43032934-43033022)
chr8 (1-78)||(4479296-4479373)
chr8 (4-80)||(14846611-14846687)
chr8 (17-89)||(39969904-39969976)
chr8 (17-89)||(43027354-43027426)
chr8 (3-89)||(2467107-2467193)
chr8 (27-67)||(3379823-3379863)
chr8 (17-89)||(8997533-8997605)
chr8 (1-89)||(26570957-26571045)
[»] chr7 (13 HSPs)
chr7 (3-89)||(48804717-48804803)
chr7 (1-89)||(22973999-22974087)
chr7 (1-89)||(38578856-38578944)
chr7 (17-89)||(24983407-24983480)
chr7 (4-80)||(4195200-4195276)
chr7 (1-89)||(17748371-17748459)
chr7 (1-89)||(21190769-21190857)
chr7 (17-89)||(36619243-36619315)
chr7 (3-89)||(10047865-10047951)
chr7 (4-89)||(16802158-16802243)
chr7 (37-89)||(28744230-28744282)
chr7 (1-89)||(34659258-34659346)
chr7 (17-73)||(41267929-41267985)
[»] chr2 (28 HSPs)
chr2 (3-89)||(12864255-12864341)
chr2 (3-89)||(16325626-16325712)
chr2 (1-79)||(38962792-38962870)
chr2 (1-98)||(25540385-25540481)
chr2 (1-89)||(3643876-3643964)
chr2 (17-89)||(35946783-35946855)
chr2 (3-62)||(6358167-6358226)
chr2 (4-91)||(13026398-13026485)
chr2 (4-89)||(10026605-10026690)
chr2 (27-84)||(10702170-10702227)
chr2 (3-92)||(28616365-28616454)
chr2 (17-89)||(3811680-3811752)
chr2 (1-89)||(38005431-38005519)
chr2 (1-89)||(44139513-44139601)
chr2 (1-84)||(42770645-42770728)
chr2 (4-78)||(2784964-2785038)
chr2 (3-89)||(8410162-8410248)
chr2 (38-84)||(11069944-11069990)
chr2 (3-89)||(14169598-14169684)
chr2 (3-92)||(20612520-20612610)
chr2 (4-62)||(22593166-22593224)
chr2 (3-89)||(33005782-33005868)
chr2 (3-89)||(34346276-34346362)
chr2 (4-89)||(26805328-26805413)
chr2 (1-89)||(10823089-10823177)
chr2 (1-89)||(12455339-12455427)
chr2 (1-89)||(37804880-37804968)
chr2 (1-89)||(41220664-41220752)
[»] chr4 (23 HSPs)
chr4 (1-89)||(16450334-16450422)
chr4 (1-89)||(36262756-36262844)
chr4 (1-89)||(52950116-52950204)
chr4 (2-89)||(20128344-20128431)
chr4 (1-95)||(38075467-38075561)
chr4 (1-89)||(3159458-3159546)
chr4 (3-79)||(29895823-29895899)
chr4 (1-89)||(40780850-40780938)
chr4 (1-92)||(5472834-5472925)
chr4 (1-84)||(7246640-7246723)
chr4 (1-55)||(20354671-20354725)
chr4 (9-83)||(26237417-26237491)
chr4 (4-74)||(46108728-46108798)
chr4 (1-89)||(16645152-16645240)
chr4 (1-89)||(47078492-47078580)
chr4 (1-84)||(38166061-38166144)
chr4 (1-68)||(40272341-40272408)
chr4 (7-77)||(21429341-21429411)
chr4 (3-68)||(20421809-20421874)
chr4 (5-89)||(6779249-6779333)
chr4 (3-79)||(15829735-15829811)
chr4 (1-84)||(27248462-27248543)
chr4 (3-79)||(31588722-31588798)
[»] chr1 (25 HSPs)
chr1 (4-89)||(11397879-11397964)
chr1 (1-89)||(10172961-10173049)
chr1 (17-89)||(30927717-30927789)
chr1 (3-80)||(17642003-17642080)
chr1 (3-80)||(26325844-26325921)
chr1 (1-89)||(5855552-5855640)
chr1 (1-89)||(34719806-34719894)
chr1 (3-89)||(4581672-4581758)
chr1 (3-89)||(41663846-41663932)
chr1 (3-89)||(49078146-49078232)
chr1 (3-80)||(8764023-8764100)
chr1 (3-84)||(10422820-10422901)
chr1 (27-84)||(44716210-44716267)
chr1 (17-91)||(34697381-34697455)
chr1 (4-46)||(47312932-47312974)
chr1 (3-89)||(50503351-50503437)
chr1 (1-50)||(33498868-33498917)
chr1 (1-89)||(32901-32989)
chr1 (1-93)||(2567306-2567398)
chr1 (17-89)||(9659169-9659241)
chr1 (21-89)||(12744513-12744581)
chr1 (21-89)||(12755503-12755571)
chr1 (1-89)||(15465995-15466083)
chr1 (4-84)||(45726428-45726508)
chr1 (24-84)||(51437510-51437570)
[»] chr3 (22 HSPs)
chr3 (3-78)||(49198382-49198457)
chr3 (3-84)||(35315987-35316068)
chr3 (8-89)||(49021193-49021274)
chr3 (1-89)||(24506638-24506726)
chr3 (3-89)||(3136684-3136770)
chr3 (3-89)||(29127950-29128036)
chr3 (3-80)||(25294991-25295068)
chr3 (3-79)||(29762155-29762231)
chr3 (1-89)||(30045850-30045938)
chr3 (3-79)||(45877485-45877561)
chr3 (1-89)||(47219173-47219261)
chr3 (1-84)||(48342049-48342132)
chr3 (1-68)||(50405614-50405681)
chr3 (31-89)||(26923251-26923309)
chr3 (3-61)||(29135944-29136002)
chr3 (3-61)||(33688982-33689040)
chr3 (3-89)||(51060271-51060357)
chr3 (1-79)||(54261255-54261333)
chr3 (1-78)||(6462441-6462518)
chr3 (4-89)||(15320218-15320303)
chr3 (2-79)||(47471861-47471938)
chr3 (17-89)||(50753331-50753403)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-74)||(6004-6077)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-89)||(8690-8778)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-68)||(9877-9944)
[»] scaffold0291 (1 HSPs)
scaffold0291 (3-89)||(6889-6975)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-78)||(9499-9551)
[»] scaffold0002 (1 HSPs)
scaffold0002 (17-89)||(618-690)


Alignment Details
Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 13036079 - 13035998
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||||  |||||||| |||||||| |||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  13036079 cttggccagtgcgcatgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaagcaaaa 13035998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 6606172 - 6606086
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||   |||||||| |||||||| | |||||||||||||| ||||||||||| ||||| | ||||||||| ||| ||||    
T  6606172 cttggccagtgtacatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaa 6606086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 14783481 - 14783409
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||||| | |||||||||||||| ||||||||||| ||||| | ||||||||| ||| ||||    
T  14783481 atgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaa 14783409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 34954693 - 34954613
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    |||||||||||  || ||||| |||||||| ||||||||||||||||  ||| |||||| |||||  ||||||||||||||    
T  34954693 ttggccagtgcacatacctctacgcatgagccagattagtcgtccacctttgatgggtcggaaaccaatgcgaaagcaaaa 34954613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 5253298 - 5253212
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||||||| | ||||| ||| ||||  |||||||||| ||||| | ||||||||||||| ||||    
T  5253298 cttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 5253212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3601117 - 3601205
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||| | | || ||| | ||||||||||||||  |||||||||| ||||| | ||||||||||||| ||||    
T  3601117 cgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 3601205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9633702 - 9633614
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||| ||| | ||||||||| ||||  |||||||||| ||||| | ||||||||| ||| ||||    
T  9633702 cgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaaaaaaaa 9633614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10311546 - 10311458
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  ||| |||| |||| |||| ||||||||||  ||| |||||||||||  |||||| ||||||||| ||| ||||    
T  10311546 cgcttggccagtgcgcatgtctctacgcacgagttagattagtcgctcaccattggtgggtcgaaaactggtgcgaaagctaaaaaaaa 10311458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12635847 - 12635935
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||  |||||||| ||||  || | ||||||||| |||||||||||||||| ||||| | ||||||||| ||| ||||    
T  12635847 cgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcgaaagccaaaaaaaa 12635935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21898681 - 21898769
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||||||| | |||||||||| |||  || ||||||| ||||| | ||||||||| ||| ||||    
T  21898681 cgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaa 21898769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29444842 - 29444754
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||||||| | ||||||| |||||   |||||||||| ||||||  ||||||||| ||| ||||    
T  29444842 cgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaaagccaaaaaaaa 29444754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31129210 - 31129298
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||  |||||||| |||||||| ||||||||| || |||  |||||| ||| ||||| | ||||||||||||| ||||    
T  31129210 cgcttggctagtgcgcatgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaagcaaaaaaaaa 31129298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 13468969 - 13469055
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaat 90  Q
    |||| ||||||  |||||||| |||| ||| ||||||||||| |||| ||||||||||  ||||| | ||||||||| ||| |||||    
T  13468969 ttggtcagtgcacatgcctctacgcacgagccagattagtcgcccaccattggtgggttggaaaccggtgcgaaagccaaaaaaaat 13469055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3588022 - 3587934
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  || ||||| |||||||  | ||||||||||| ||  ||| ||| || ||||||||||||||||| ||| ||||    
T  3588022 cgcttggccagtgcacatacctctacgcatgaaccggattagtcgtcaacctttgatggatcggaaactgatgcgaaagccaaaaaaaa 3587934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 7616966 - 7617033
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    |||||||| |||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||||    
T  7616966 atgcctctacgcatgagtcagattagtcgtccattattggtggatcggaaactggtgcgaaagcaaaa 7617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 8513550 - 8513632
Alignment:
Q  2 gcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    |||||||||||||  |||||||| |||| ||| ||||||||||||||||  |||||||||| ||||| | |||||||||||||    
T  8513550 gcttggccagtgcacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaa 8513632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 16755102 - 16755168
Alignment:
Q  24 tgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaat 90  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| | |||||||| |||| |||||    
T  16755102 tgcgcatgagtcggattagtcgtccactattggtgggttagaaaccggtgcgaaagaaaaaaaaaat 16755168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9805034 - 9805113
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||||||||||||  |||||||| |||||||| | ||||||||||||||  |||||||||| ||||| | |||||||||    
T  9805034 cgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaagc 9805113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 1538463 - 1538540
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||||||||||  |||||||| |||||||| | ||||| |||||||| ||||||||||| ||||| | |||||||||    
T  1538463 cttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaagc 1538540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 20255401 - 20255478
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    |||| |||||||  |||||||| |||||||||| ||||||||||||||  |||||| ||| ||||||| |||||||||    
T  20255401 cttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaagc 20255478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20692963 - 20693051
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||| |  ||||||||| |||||| |||||||||| ||||||  |||||||||| ||||| | |||||||| |||| ||||    
T  20692963 cgcttggccagtacacatgcctctgtgcatgattcagattagttgtccacctttggtgggtcggaaaccggtgcgaaagtaaaaaaaaa 20693051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23383687 - 23383775
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||   ||||||| ||||||||   ||||||||||||||  |||||||||| ||||||| ||||||||| ||| ||||    
T  23383687 cgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaagctaaaaaaaa 23383775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 20228748 - 20228835
Alignment:
Q  2 gcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||| ||||| ||||||||| | || ||||||||||||||| |||   ||||||| |||||||| |||| |||||||||| ||||    
T  20228748 gcttggctagtgcgtatgcctctacacacgagtcagattagtcgcccatctttggtggatcagaaaccgatgtgaaagcaaaaaaaaa 20228835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42086357 - 42086436
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    |||||| |||||||  |||||||| |||||||| | ||||||||||||||  |||||||||| ||||| | |||||||||    
T  42086357 cgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 42086436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 12766162 - 12766240
Alignment:
Q  2 gcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||||||||||   |||||||| |||||||  ||||||||||| ||||  |||||||||||||||| | |||||||||    
T  12766162 gcttggccagtgtgcatgcctctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 12766240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 42861293 - 42861207
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||||||| | ||||| |||||||| ||||||||||| || || | ||||||||| ||| ||||    
T  42861293 cttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaagccaaaaaaaa 42861207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 19572756 - 19572845
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaataa 92  Q
    ||||||||||||  |||||||| |||||||| | |||||||||| ||| ||||||||||  |||||   ||||||||| ||| |||||||    
T  19572756 cttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaagccaaaaaaaataa 19572845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5731997 - 5731909
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| || ||||| |||||||||||| |||  || ||||||| ||||| | ||||||||| ||| ||||    
T  5731997 cgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaa 5731909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 43212566 - 43212494
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||| |||||||  |||||||||| ||| ||| ||||||||||||| ||| |||||| |||| ||||    
T  43212566 atgcctctgcacatgagttggattagtcgttcaccatttgtgggtcagaaaccgatacgaaagtaaaaaaaaa 43212494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43399158 - 43399246
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||| |||   ||||||||||||||  ||||| |||| ||||| | ||||||||||||| ||||    
T  43399158 cgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaagcaaaaaaaaa 43399246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 20525874 - 20525945
Alignment:
Q  7 gccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaa 78  Q
    ||||||||  |||||||| |||||||| | |||||||||||||| |||||||| || ||||| | |||||||    
T  20525874 gccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 14235765 - 14235703
Alignment:
Q  27 gcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||| ||||||||  ||||  |||||||||||||||| ||||| ||||||||| ||||    
T  14235765 gcatgagtcggattagtcacccacctttggtgggtcagaaaccgatgcaaaagcaaaaaaaaa 14235703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 39099854 - 39099768
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||||||| | ||||||||| ||||  |||||||||| ||||| | ||| ||||| ||| ||||    
T  39099854 cttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaagccaaaaaaaa 39099768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 41163534 - 41163449
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||  ||| |||| ||||||||   ||||||||||||||  || ||||||| ||||||| ||||||||| ||| ||||    
T  41163534 ttggccagtgcacatgtctctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaaagccaaaaaaaa 41163449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 24653853 - 24653801
Alignment:
Q  37 gattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||| |||||||| |||||||||||  |||| ||||||||||||||| ||||    
T  24653853 gattaatcgtccaccattggtgggtcgaaaaccgatgcgaaagcaaaaaaaaa 24653801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 3418588 - 3418502
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||| ||| |||||||||||||||||||||||||  || ||||||||||||| | ||||||||||||| ||||    
T  3418588 cttggccagtgcgcatgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaaagcaaaaaaaaa 3418502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8141135 - 8141214
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||||||||||||  |||||||| ||||||||    |||||||||||||  |||||||||||||||| |||||||||||    
T  8141135 cgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccacatttggtgggtcagaaaccgatgcgaaagc 8141214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 9860070 - 9859989
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    |||||||||||   |||||||| | |||||| |||||||||||||||| |||||||| || ||||| ||||| |||||||||    
T  9860070 cttggccagtgtgcatgcctctacacatgagccagattagtcgtccaccattggtggatcggaaaccgatgcaaaagcaaaa 9859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10927639 - 10927727
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||||||| | |||||||||| |||  || ||||||| ||||| ||||||||||| ||| ||||    
T  10927639 cgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagccaaaaaaaa 10927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43032934 - 43033022
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| | || ||| | ||||||||| ||||  |||||||||||||||| | ||||||||||||| ||||    
T  43032934 cgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcaaaaaaaaa 43033022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4479373 - 4479296
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaa 78  Q
    ||||||||||||||  |||||||| ||||||||   ||||||||||||||  |||||||||| ||||| | |||||||    
T  4479373 cgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 14846611 - 14846687
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    |||| ||||||  |||||||| |||||||||||||| ||||||||||  |||||||||| ||||  | |||||||||    
T  14846611 ttggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaaagc 14846687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 39969976 - 39969904
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| | |||||||||||||||||| |||  |||| ||| || ||||| ||||||||||||||| ||||    
T  39969976 atgcctctacacatgagtcagattagtcgcccatcattgatggatcggaaaccgatgcgaaagcaaaaaaaaa 39969904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 43027354 - 43027426
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||||| | |||||||||||||   ||| |||||| ||||| ||||||||||||||| ||||    
T  43027354 atgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaagcaaaaaaaaa 43027426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 2467193 - 2467107
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  ||| ||||  ||||||| | |||||||||||||| ||||||| ||| ||||| | ||||||||| ||| ||||    
T  2467193 cttggccagtgcgcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaagccaaaaaaaa 2467107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 3379863 - 3379823
Alignment:
Q  27 gcatgagtcagattagtcgtccactattggtgggtcagaaa 67  Q
    ||||||||| ||||||||||||||| |||||||||| ||||    
T  3379863 gcatgagtcggattagtcgtccacttttggtgggtcggaaa 3379823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 8997605 - 8997533
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||| | |||||||| |||||||||||| ||   |||||||||| ||||| | ||||||||||||| ||||    
T  8997605 atgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 8997533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 26570957 - 26571045
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||||  ||||| ||| |||||||| | ||||||||||||||  ||| || ||| ||||| |||| |||||| ||| ||||    
T  26570957 cgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccacctttgatgagtcggaaaccgatgtgaaagccaaaaaaaa 26571045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 5e-18; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 48804717 - 48804803
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||||||| | |||||||||||||| ||||||||||| ||||| | ||||||||||||| ||||    
T  48804717 cttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 48804803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22973999 - 22974087
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||||   |||| ||| |||||||| ||||||||||||||||  |||||||||||||||| |  |||||||| ||| ||||    
T  22973999 cgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccacctttggtgggtcagaaaccggcgcgaaagccaaaaaaaa 22974087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38578944 - 38578856
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||||||| | ||||||||| ||||  |||||||||| ||||| | |||||||| |||| ||||    
T  38578944 cgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagaaaaaaaaaa 38578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 24983480 - 24983407
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtc-agaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||||| | |||||||||||||| |||||||||||  ||||| ||||||||||| ||| ||||    
T  24983480 atgcctctacgcatgagccggattagtcgtccaccattggtgggtctggaaaccgatgcgaaagccaaaaaaaa 24983407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 4195276 - 4195200
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||| |||||  |||||||| |||||||| | |||||| ||||||| ||||||||||  ||||| |||||||||||    
T  4195276 ttggctagtgcgcatgcctctacgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaaagc 4195200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17748459 - 17748371
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| || | ||| | ||||||||||||||  ||| |||||| ||||| ||||||||||| ||| ||||    
T  17748459 cgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccgatgcgaaagccaaaaaaaa 17748371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21190857 - 21190769
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||  |||||||| |||| ||||||||||||||| |||  | |||||||||  |||| | ||||||||||||| ||||    
T  21190857 cgcttggctagtgcgcatgcctctacgcacgagtcagattagtcgcccatcaatggtgggtcgaaaaccggtgcgaaagcaaaaaaaaa 21190769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 36619315 - 36619243
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||||| | |||||||||||||| |||||||||||| ||||   || |||||||||| ||||    
T  36619315 atgcctctacgcatgagccggattagtcgtccaccattggtgggtcaaaaaccagtgtgaaagcaaaaaaaaa 36619243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 10047951 - 10047865
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcaga-ttagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  | |||||| |||||||| |||| |||||||||||| ||||||||||| ||||| | ||||||||| ||| ||||    
T  10047951 cttggccagtgcgcaggcctctacgcatgag-cagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaa 10047865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 16802158 - 16802243
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||| ||||||||| |||| ||| | |||||||||  ||| |||||||||||  |||||| ||| ||||| ||| ||||    
T  16802158 ttggccagtgcgtatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgaaaactggtgcaaaagccaaaaaaaa 16802243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 28744230 - 28744282
Alignment:
Q  37 gattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||||| ||||||| ||||||||| ||| ||||    
T  28744230 gattagtcgtccacctttggtgggtcggaaactggtgcgaaagccaaaaaaaa 28744282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34659258 - 34659346
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||| |||||||  |||||||| |||| ||| | ||||||||| |||| ||||||| |||  |||| | ||||||||||||| ||||    
T  34659258 cgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaagcaaaaaaaaa 34659346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 41267985 - 41267929
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatg 73  Q
    |||||||| ||||||||| |||||||||||||||  ||| |||||| ||||| ||||    
T  41267985 atgcctctacgcatgagttagattagtcgtccacctttgatgggtcggaaaccgatg 41267929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 5e-18; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 12864255 - 12864341
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||| ||||||  ||||||||||||||||| |||||||||||||||| ||||||||||| ||||| | |||||||| |||| ||||    
T  12864255 cttggtcagtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagtaaaaaaaaa 12864341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 16325626 - 16325712
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||   |||||||| |||||||| |||||||||||||||| ||||||||||| ||||| | ||||||||||||| ||||    
T  16325626 cttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 16325712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38962792 - 38962870
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaag 79  Q
    ||||||||||||||  |||||||| |||||||  | ||||||||||||||  |||||||||||||||||| ||||||||    
T  38962792 cgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaag 38962870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25540481 - 25540385
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaataatcatat 98  Q
    ||||||||||||||  |||||||| |||| ||| | ||||||||||||||  |||||||||| ||||| | ||||||||||||| |||||||| ||||    
T  25540481 cgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaa-aaaataataatat 25540385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3643964 - 3643876
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| ||||||||   ||||||||||||||  |||||||| | ||||| | ||||||||||||| ||||    
T  3643964 cgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaagcaaaaaaaaa 3643876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 35946783 - 35946855
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||| ||| | |||||||||||||| ||||||||||| ||||||| |||||||| |||| ||||    
T  35946783 atgcctctacgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaaaggaaaaaaaaa 35946855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 6358226 - 6358167
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtc 62  Q
    ||||||||||||  |||||||| |||||||| | |||||||||||||| |||||||||||    
T  6358226 cttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 6358167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 13026485 - 13026398
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaata 91  Q
    |||||||||||  |||||||| |||||||| | ||||||||  ||||| ||||| |||||||||| ||||| ||||| ||| ||||||    
T  13026485 ttggccagtgcgcatgcctctacgcatgagccggattagtcagccacttttggtaggtcagaaaccgatgcaaaagccaaaaaaaata 13026398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 10026690 - 10026605
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||  |||||||| |||||||| | ||||||||| ||||  |||||||||| ||||||  || |||||||||| ||||    
T  10026690 ttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaagcaaaaaaaaa 10026605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 10702227 - 10702170
Alignment:
Q  27 gcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||| |||||||| |||||  || ||||||||||||||| |||||||||||||    
T  10702227 gcatgagtcggattagtcatccacctttagtgggtcagaaactggtgcgaaagcaaaa 10702170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 28616454 - 28616365
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaataa 92  Q
    ||||| ||||||  |||||||| |||| ||| ||||||||||| |||   || ||||||||||||| | ||||||||||||| |||||||    
T  28616454 cttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgcgaaagcaaaaaaaaataa 28616365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 3811752 - 3811680
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||||| | ||||| ||| ||||  |||||||||||||||| ||||||||||| ||| ||||    
T  3811752 atgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaagccaaaaaaaa 3811680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38005431 - 38005519
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| | |||||| | ||||||||| ||||  ||||||| || ||||||| ||||||||| ||| ||||    
T  38005431 cgcttggccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaagccaaaaaaaa 38005519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44139513 - 44139601
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||   ||||||| |||| ||| | ||||||||| |||| | ||||||||| ||||| | ||||||||||||| ||||    
T  44139513 cgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 44139601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 42770728 - 42770645
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||||||  |||||||| |||| ||| | ||||| ||||||||  ||||||||||  |||| ||||| |||||||||    
T  42770728 cgcttggccagtgcgcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaaccgatgcaaaagcaaaa 42770645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 2784964 - 2785038
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaa 78  Q
    |||| ||||||  |||||||| ||||||||||||||||||||||||  |||| || ||| ||||| | |||||||    
T  2784964 ttggtcagtgcgcatgcctctacgcatgagtcagattagtcgtccatcattgatgagtcggaaaccggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 8410162 - 8410248
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||| ||| | ||||||||| ||||| |||| ||||| ||||| | ||||||||| ||| ||||    
T  8410162 cttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaagccaaaaaaaa 8410248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 11069944 - 11069990
Alignment:
Q  38 attagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    |||||||||||||  |||||||||| ||||| |||||||||||||||    
T  11069944 attagtcgtccaccgttggtgggtcggaaaccgatgcgaaagcaaaa 11069990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 14169684 - 14169598
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||| |||||||  ||| |||| |||||||| | ||||||||||| || ||||||||||| ||||| | |||||||| |||| ||||    
T  14169684 cttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaagtaaaaaaaaa 14169598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 20612610 - 20612520
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcag-attagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaataa 92  Q
    ||||||||||||  ||||||||  ||||||| | | ||||||||||||| ||||||||||| ||||| | ||||||| | ||| |||||||    
T  20612610 cttggccagtgcgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaaaccaaaaaaaataa 20612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 22593166 - 22593224
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtc 62  Q
    |||||||||||  |||||||| |||||||| | ||||||||||||||  ||||||||||    
T  22593166 ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtc 22593224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 33005782 - 33005868
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||||||| ||||||| |||  |||  || ||||||| ||||| |||||||||| |||| ||||    
T  33005782 cttggccagtgcgcatgcctctacgcatgaggcagattaatcgctcacctttagtgggtcggaaaccgatgcgaaagaaaaaaaaaa 33005868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 34346362 - 34346276
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||   |||||||| |||||||||||||||| |||  |||  |||||||||| ||||| | ||||||||| ||| ||||    
T  34346362 cttggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgcgaaagccaaaaaaaa 34346276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 26805328 - 26805413
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||  |||||||| |||||||||| ||||||||| ||||  ||||||| ||  |||| ||||| ||||| ||| ||||    
T  26805328 ttggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccgatgcaaaagccaaaaaaaa 26805413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10823089 - 10823177
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||| ||| | ||||||||| ||||  || ||||||| ||||| | ||||||||| ||| ||||    
T  10823089 cgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcgaaagccaaaaaaaa 10823177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12455339 - 12455427
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||| ||||||||  |||||||| |||| ||| | |||||||||  ||| ||||||||||| ||||| | ||||||||| ||| ||||    
T  12455339 cgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaa 12455427  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37804968 - 37804880
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||  ||||| || ||||||||||||||| || | |||| |||| |||||| |||||  || ||||||||||| ||||    
T  37804968 cgcttggctagtgcgcatgccgctacgcatgagtcagatttgttgcccaccattgatgggtcggaaaccaatacgaaagcaaaaaaaaa 37804880  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41220664 - 41220752
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||||||| |  ||||||||| |||  || ||||||| ||||| | ||||||||| ||| ||||    
T  41220664 cgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaa 41220752  T

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Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16450334 - 16450422
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||||||| ||||||||||||||||  ||||| |||| ||||| | ||||||||||||| ||||    
T  16450334 cgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaagcaaaaaaaaa 16450422  T

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Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36262844 - 36262756
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||| ||||| ||||||||| ||||  ||||||||||||||||  |||||||||| ||| ||||    
T  36262844 cgcttggccagtgcacatgcctctacgcacgagtcggattagtcgcccacctttggtgggtcagaaaccaatgcgaaagccaaaaaaaa 36262756  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 52950116 - 52950204
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  ||| |||| | |||||  ||||||||||||||||  |||||||||| ||||| ||||||||||||||| ||||    
T  52950116 cgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttggtgggtcggaaaccgatgcgaaagcaaaaaaaaa 52950204  T

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Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 20128344 - 20128431
Alignment:
Q  2 gcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||||  |||||| | |||| |||  ||||||||||||||| ||||||||||||||||| | ||||||||| ||| ||||    
T  20128344 gcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccaccattggtgggtcagaaaccggtgcgaaagccaaaaaaaa 20128431  T

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Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38075467 - 38075561
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaataatca 95  Q
    ||||||||||||||  |||||||| |||||||| |  |||| | ||||||  |||||||||| ||||| ||||||||||||||| |||| |||||    
T  38075467 cgcttggccagtgcgcatgcctctacgcatgagccgaattaattgtccacctttggtgggtcggaaaccgatgcgaaagcaaaaaaaaaaaatca 38075561  T

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Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3159546 - 3159458
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||| ||| |||||||||||  ||| ||||||||||| ||||| | ||| ||||||||| ||||    
T  3159546 cgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaaccggtgcaaaagcaaaaaaaaa 3159458  T

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Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 29895823 - 29895899
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaag 79  Q
    ||||||||||||  |||||||| |||||||| | |||||||||||||| |||||||| || ||||| | ||||||||    
T  29895823 cttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaag 29895899  T

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Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40780938 - 40780850
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||| ||||||  |||||||| |||||||| | ||||||||||||||  |||||||||| ||||| | ||||||| ||||| ||||    
T  40780938 cgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaaacaaaaaaaaa 40780850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5472925 - 5472834
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaataa 92  Q
    ||||||||||||||  |||||||| |||| ||| | ||||||||| ||||  ||||||||||  |||||| ||||||||||| | |||||||    
T  5472925 cgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaagcaacaaaaaataa 5472834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7246723 - 7246640
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||||||  |||||||| |||||||| | ||||||||| ||||  |||||||||| ||||| | |||||||| ||||    
T  7246723 cgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaaggaaaa 7246640  T

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Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20354671 - 20354725
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattg 55  Q
    |||||||| |||||  |||||||| |||||||||| |||||||||||||||||||    
T  20354671 cgcttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccactattg 20354725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 26237491 - 26237417
Alignment:
Q  9 cagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaa 83  Q
    |||||| |||| || | |||||||||| ||||||| |||||| |||| |||||| ||||||||||||||| ||||    
T  26237491 cagtgcgtatgtctttacgcatgagtcggattagtagtccaccattgatgggtcggaaactgatgcgaaaacaaa 26237417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 46108728 - 46108798
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgc 74  Q
    ||||| |||||  |||||||| |||||||| ||||||||||||||||| ||| |||||| ||||| |||||    
T  46108728 ttggctagtgcgcatgcctctacgcatgagccagattagtcgtccacttttgatgggtcggaaaccgatgc 46108798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16645152 - 16645240
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||||||||   |||||||| | |||||||| ||||||||| ||||   ||||||||| ||||| | ||||||||||||| ||||    
T  16645152 cgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 16645240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47078492 - 47078580
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||| ||| | |||||||||  ||| ||||||||||| |||||   ||||||||||||| ||||    
T  47078492 cgcttggccagtgcacatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaagcaaaaaaaaa 47078580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38166061 - 38166144
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||||||  ||| |||| |||| ||| | ||||||||| ||||  |||||||||| ||||| | |||||||||||||    
T  38166061 cgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaa 38166144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40272408 - 40272341
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaac 68  Q
    ||||||||||||||  |||||||| ||||| |||| |||| ||||| ||| ||||||||||| |||||    
T  40272408 cgcttggccagtgcgcatgcctctacgcataagtcggatttgtcgttcaccattggtgggtcggaaac 40272341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 21429341 - 21429411
Alignment:
Q  7 gccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaa 77  Q
    ||||||||  |||||||| |||| |||||||| |||||||||||  |||||||||| ||||| | ||||||    
T  21429341 gccagtgcgcatgcctctacgcacgagtcagactagtcgtccacctttggtgggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 20421809 - 20421874
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaac 68  Q
    ||||||||||||  |||||||| |||||||| ||||||| |||||||  |||| |||||| |||||    
T  20421809 cttggccagtgcgcatgcctctacgcatgagccagattaatcgtccatcattgatgggtcggaaac 20421874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 6779249 - 6779333
Alignment:
Q  5 tggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||  ||||||||  ||||||| | ||||||||||||||  ||||||  || ||| | ||||||||||||||| ||||    
T  6779249 tggccagtgcgcatgcctctatgcatgagccggattagtcgtccacctttggtgaatcggaacccgatgcgaaagcaaaaaaaaa 6779333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 15829735 - 15829811
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaag 79  Q
    ||||||||||||  |||| |||  ||||||| | |||||||| ||||| |||||||| |||||||| | ||||||||    
T  15829735 cttggccagtgcgcatgcttctaggcatgagccggattagtcctccaccattggtggatcagaaaccggtgcgaaag 15829811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27248462 - 27248543
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||| ||  |||||||| |||| ||| ||||||||||| ||||  ||||| |||||||||||| || ||||| ||||    
T  27248462 cgcttggccagcgc--atgcctctacgcaggagccagattagtcgcccacctttggtaggtcagaaactggtgtgaaagaaaaa 27248543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 31588722 - 31588798
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaag 79  Q
    ||||||||||||  ||| |||| |||||||| | |||||||||  |||| ||||||| || ||||| ||||||||||    
T  31588722 cttggccagtgcgcatgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaaccgatgcgaaag 31588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 11397964 - 11397879
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||| ||| ||||||||| |||||||||| ||||||||||||||  |||||||||| ||||  | ||||||||||||| ||||    
T  11397964 ttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaagcaaaaaaaaa 11397879  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10173049 - 10172961
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||| |||||||| |||||||| | ||||| ||| ||||  |||||||||| ||||| | ||||||||||||| ||||    
T  10173049 cgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 10172961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 30927789 - 30927717
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||||| | ||||||||||||||| |||||||||||||||| | ||| ||||||||| ||||    
T  30927789 atgcctctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgcaaaagcaaaaaaaaa 30927717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 17642080 - 17642003
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||||||||||  |||||||| |||| ||| | ||||||||||||||  |||||||||| ||||||| |||||||||    
T  17642080 cttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagc 17642003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 26325844 - 26325921
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||| ||||||  |||||||| |||||||| | |||||||||||||| ||||||||||| ||||| | |||||||||    
T  26325844 cttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 26325921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5855552 - 5855640
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  |||||||| |||||||| | |||||||||| |||  || ||||||| ||||| ||||||||||| ||| ||||    
T  5855552 cgcttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagctaaaaaaaa 5855640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34719806 - 34719894
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||| |||||||  |||||||| |||| |||||||||||||||  |||  |||||||||| ||||||| ||||||||| ||| ||||    
T  34719806 cgcttgaccagtgcgcatgcctctacgcacgagtcagattagtcgctcacctttggtgggtcggaaactggtgcgaaagccaaaaaaaa 34719894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 4581758 - 4581672
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||| ||| | || |||||||||||  |||||||||| ||||| | ||||||||||||| ||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 4581672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 41663932 - 41663846
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||| ||||||  |||||||| ||||||||   |||||||||||||| ||||||||||| ||||| | ||||||||| ||| ||||    
T  41663932 cttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaa 41663846  T

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Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 49078146 - 49078232
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||||||| | |||||||||| ||| |||||| |||| ||||| | ||||||||| ||| ||||    
T  49078146 cttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaagccaaaaaaaa 49078232  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 8764023 - 8764100
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||||||||||  |||||||| |||| ||| | ||||||||||||||  |||||||||| ||||| | |||||||||    
T  8764023 cttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaagc 8764100  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 10422820 - 10422901
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||||  |||||||| |||||||| | ||||||||||||||  |||||  ||| ||||| | |||||||||||||    
T  10422820 cttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaagcaaaa 10422901  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 44716267 - 44716210
Alignment:
Q  27 gcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||||||||||||||| | ||||||||||  ||| | ||||||||||||||    
T  44716267 gcatgagtcagattagtcgtccatttttggtgggtcgaaaattaatgcgaaagcaaaa 44716210  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 34697381 - 34697455
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaata 91  Q
    |||||||| |||||||| | ||||||||| ||||| ||| |||||  ||||| ||||||||||| ||| ||||||    
T  34697381 atgcctctacgcatgagccggattagtcgcccacttttgatgggttggaaaccgatgcgaaagccaaaaaaaata 34697455  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 47312974 - 47312932
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgt 46  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||    
T  47312974 ttggccagtgcgtatgcctctacgcatgagccagattagtcgt 47312932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 50503437 - 50503351
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||| |||||||  |||||||| |||| ||| | |||| |||| |||| | ||||||||| ||||| ||||||||||||||| ||||    
T  50503437 cttgaccagtgcgcatgcctctacgcacgagccggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaaagcaaaaaaaaa 50503351  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33498917 - 33498868
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccac 50  Q
    ||||||||||||||  |||||||| |||||||| | ||||||||||||||    
T  33498917 cgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccac 33498868  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32901 - 32989
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||| ||||||  |||||||| |||||||| |  |||||||||| ||| ||| ||| || ||||| ||| ||||||||||| ||||    
T  32901 cgcttggtcagtgcacatgcctctacgcatgagccgaattagtcgtctacttttgatggatcggaaaccgatacgaaagcaaaaaaaaa 32989  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2567306 - 2567398
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaataat 93  Q
    ||||||||||||||  |||||||| | || |||||||||||| ||||||   |||||||||| ||||| | | |||||| |||| ||| ||||    
T  2567306 cgcttggccagtgcgcatgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaagaaaaaaaaattaat 2567398  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 9659241 - 9659169
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||| | |||||||| | ||||||||||||||  |||||||||  ||||| | ||||||||||||| ||||    
T  9659241 atgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaagcaaaaaaaaa 9659169  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 12744581 - 12744513
Alignment:
Q  21 ctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||| |||||||| |  ||||||||  |||| |||||||||||||||| ||||||||||| ||| ||||    
T  12744581 ctctacgcatgagccgaattagtcgctcactgttggtgggtcagaaacagatgcgaaagccaaaaaaaa 12744513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 12755571 - 12755503
Alignment:
Q  21 ctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||| |||||||| |  ||||||||  |||| |||||||||||||||| ||||||||||| ||| ||||    
T  12755571 ctctacgcatgagccgaattagtcgctcactgttggtgggtcagaaacagatgcgaaagccaaaaaaaa 12755503  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15465995 - 15466083
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||| ||||||  |||||||| |||| ||||| |||| ||||  |||  |||||||||| ||||| ||| ||||||||||| ||||    
T  15465995 cgcttggtcagtgcacatgcctctacgcacgagtctgattggtcgctcacctttggtgggtcggaaaccgatacgaaagcaaaaaaaaa 15466083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 45726508 - 45726428
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||| |||| |||| |||||||| | |||||||||| |||  ||||||| || || |||| |||||||| ||||    
T  45726508 ttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctttggtggatcggagactggtgcgaaagaaaaa 45726428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 51437510 - 51437570
Alignment:
Q  24 tgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    |||||||||| | |||||||| |||||  |||||||||| ||||| | |||||||||||||    
T  51437510 tgcgcatgagccggattagtcatccacctttggtgggtcggaaaccggtgcgaaagcaaaa 51437570  T

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Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 49198382 - 49198457
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaa 78  Q
    ||||||||||||  |||||||| |||||||| | |||||||||||||| |||||||| |||||||| |||| ||||    
T  49198382 cttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggatcagaaaccgatgtgaaa 49198457  T

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Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 35315987 - 35316068
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    ||||||||||||  |||||||| ||||||||   ||||||||| ||||| |||||||||| ||||| |||||||||| ||||    
T  35315987 cttggccagtgcgcatgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaagaaaaa 35316068  T

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Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 49021274 - 49021193
Alignment:
Q  8 ccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||  |||||||| |||||||| | |||||||||||||| ||||||||||| ||||| | ||||||||| ||| ||||    
T  49021274 ccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaa 49021193  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24506726 - 24506638
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||| |||||||  |||||||| ||||||||||||||||||||  ||| ||||||||||| ||||| | ||| ||||| ||| ||||    
T  24506726 cgcttgaccagtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaaccggtgcaaaagccaaaaaaaa 24506638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 3136770 - 3136684
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||| ||||||  |||||||| |||||||||| ||||||||||||||  ||||| |||| ||||| | ||||||||| ||| ||||    
T  3136770 cttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaagccaaaaaaaa 3136684  T

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Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 29127950 - 29128036
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||| ||||||  |||||||| |||||||| | ||||||||| ||||  |||||||||| ||||| ||||||||||| ||| ||||    
T  29127950 cttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagccaaaaaaaa 29128036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 25294991 - 25295068
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagc 80  Q
    ||||||||||||  ||||||||  ||||||| | |||||||||||||| ||||||||||  ||||| | |||||||||    
T  25294991 cttggccagtgcgcatgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaagc 25295068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 29762231 - 29762155
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaag 79  Q
    ||||||||||||  ||||||||  |||||||   |||||||||||||| ||||||||||| ||||| | ||||||||    
T  29762231 cttggccagtgcgcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 29762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30045850 - 30045938
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||  ||| |||| |||| ||||| ||||||||||||||  ||| ||||||  |||||  ||||||||||||| ||||    
T  30045850 cgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaactagtgcgaaagcaaaaaaaaa 30045938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 45877485 - 45877561
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaag 79  Q
    ||||||||||||  |||||||| |||||||| | |||||||||| ||| |||| |||||| ||||| | ||||||||    
T  45877485 cttggccagtgcacatgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaag 45877561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47219173 - 47219261
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||||  |||||||| |||||||| | ||||||||||||||  ||| |||||| ||||| | ||||||||| ||| ||||    
T  47219173 cgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaagccaaagaaaa 47219261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 48342049 - 48342132
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaa 84  Q
    |||||||| |||||  |||||||| |||||||  |||||||||||||||   ||||||| || ||||| | |||||||||||||    
T  48342049 cgcttggctagtgcgcatgcctctacgcatgaaccagattagtcgtccatctttggtggatcggaaacaggtgcgaaagcaaaa 48342132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 50405681 - 50405614
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaac 68  Q
    |||||| |||||||  |||||||| |||| ||||| ||||||||| |||| ||||||||||| |||||    
T  50405681 cgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaac 50405614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 26923309 - 26923251
Alignment:
Q  31 gagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||| ||||| | ||||| |||||||||||||||||| | ||||||||||||| ||||    
T  26923309 gagtcggattaattgtccattattggtgggtcagaaaccggtgcgaaagcaaaaaaaaa 26923251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 29135944 - 29136002
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggt 61  Q
    ||||||||||||  |||||||| |||||||| | |||||||| ||||| ||||||||||    
T  29135944 cttggccagtgcgcatgcctctacgcatgagccggattagtcttccaccattggtgggt 29136002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 33688982 - 33689040
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggt 61  Q
    ||||||||||||  |||||||| |||||||| ||| |||||| ||||| ||||||||||    
T  33688982 cttggccagtgcgcatgcctctacgcatgagccagtttagtcatccaccattggtgggt 33689040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 51060357 - 51060271
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||| ||||||  |||||||| |||||||    |||||||||||||| ||||||||||| ||||| | ||||||||| ||| ||||    
T  51060357 cttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaa 51060271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 54261255 - 54261333
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaag 79  Q
    ||||||||||||||  |||||||| |||||||| | |||||||||| |||  || ||||||| ||||| | ||||||||    
T  54261255 cgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6462441 - 6462518
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaa 78  Q
    ||||||||||||||  |||||||| |||||||| | ||||||||| ||| |||| ||||||  ||||| | |||||||    
T  6462441 cgcttggccagtgcgcatgcctctacgcatgagccggattagtcgaccattattagtgggttggaaaccggtgcgaaa 6462518  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 15320218 - 15320303
Alignment:
Q  4 ttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||   |||||||| |||| ||| | ||||||||| ||||  |||||||||||||||| | ||||||||| ||| ||||    
T  15320218 ttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaaaaaaaa 15320303  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 47471861 - 47471938
Alignment:
Q  2 gcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaag 79  Q
    ||||||| |||||  |||| ||| |||||||| |  |||||||||||||  |||||||||| ||||| ||||||||||    
T  47471861 gcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaaag 47471938  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 50753403 - 50753331
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| |||| ||||| |||||||||| ||  ||||||||||| ||||| | ||| ||||||||| ||||    
T  50753403 atgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtgcaaaagcaaaaaaaaa 50753331  T

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Target: scaffold0384 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6004 - 6077
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgc 74  Q
    ||||||||||||||  |||||||| |||||||| |  ||||||||||||| ||||||||||| ||||| |||||    
T  6004 cgcttggccagtgcacatgcctctacgcatgagacgaattagtcgtccaccattggtgggtcggaaaccgatgc 6077  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8778 - 8690
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||||   ||||||| ||||||||   ||||||||||||||  |||||||||| ||||||| ||||||||| ||| ||||    
T  8778 cgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaagctaaaaaaaa 8690  T

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Target: scaffold0170 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9877 - 9944
Alignment:
Q  1 cgcttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaac 68  Q
    ||||||||||||||  |||||||| |||| ||| | ||||||||||||||  ||||||||||||||||    
T  9877 cgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcagaaac 9944  T

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Target: scaffold0291 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 6889 - 6975
Alignment:
Q  3 cttggccagtgcctatgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    ||||||||||||  |||||||| |||||||| | |||||||||  |||  |||||||||| ||||| | ||||||||||||| ||||    
T  6889 cttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 6975  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 9499 - 9551
Alignment:
Q  26 cgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaa 78  Q
    |||||||| || |||||||||||||  |||||||||||||||| | |||||||    
T  9499 cgcatgagccaaattagtcgtccacctttggtgggtcagaaaccggtgcgaaa 9551  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 618 - 690
Alignment:
Q  17 atgcctctgcgcatgagtcagattagtcgtccactattggtgggtcagaaactgatgcgaaagcaaaacaaaa 89  Q
    |||||||| || ||||| |||||||||||  |||  |||||||||| ||||| | ||||||||||||| ||||    
T  618 atgcctctacgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaa 690  T

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