View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15662_low_5 (Length: 448)

Name: NF15662_low_5
Description: NF15662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15662_low_5
NF15662_low_5
[»] chr7 (58 HSPs)
chr7 (216-422)||(36585304-36585510)
chr7 (26-153)||(20885108-20885236)
chr7 (26-153)||(40090047-40090175)
chr7 (28-153)||(42890472-42890598)
chr7 (32-153)||(44732023-44732145)
chr7 (26-153)||(28061644-28061772)
chr7 (26-153)||(36623313-36623441)
chr7 (26-153)||(41897993-41898121)
chr7 (26-153)||(47156032-47156160)
chr7 (26-153)||(48602441-48602569)
chr7 (27-153)||(40256063-40256190)
chr7 (25-153)||(7438907-7439036)
chr7 (26-153)||(16778510-16778638)
chr7 (26-153)||(38851976-38852104)
chr7 (26-152)||(32431488-32431615)
chr7 (24-153)||(36585112-36585242)
chr7 (28-153)||(39130055-39130181)
chr7 (26-153)||(35117131-35117258)
chr7 (28-153)||(41134617-41134738)
chr7 (28-136)||(6174843-6174952)
chr7 (27-150)||(25566680-25566803)
chr7 (26-153)||(41088592-41088720)
chr7 (30-153)||(46479838-46479962)
chr7 (26-150)||(42877391-42877516)
chr7 (26-153)||(2198607-2198735)
chr7 (26-152)||(6766680-6766807)
chr7 (31-149)||(11502713-11502832)
chr7 (26-153)||(46103499-46103620)
chr7 (28-152)||(30342081-30342206)
chr7 (63-153)||(5788506-5788597)
chr7 (30-150)||(8683827-8683945)
chr7 (28-136)||(7457868-7457976)
chr7 (52-152)||(49101943-49102044)
chr7 (92-153)||(21379816-21379877)
chr7 (36-153)||(3851092-3851207)
chr7 (28-150)||(4131635-4131758)
chr7 (93-153)||(23707552-23707612)
chr7 (26-120)||(46322127-46322222)
chr7 (52-152)||(16870610-16870711)
chr7 (28-149)||(47525969-47526092)
chr7 (24-149)||(3785523-3785649)
chr7 (82-152)||(27045538-27045608)
chr7 (89-150)||(5529080-5529141)
chr7 (92-152)||(35570179-35570239)
chr7 (89-136)||(7169195-7169242)
chr7 (93-136)||(26161669-26161712)
chr7 (30-147)||(36341629-36341747)
chr7 (88-146)||(37467444-37467501)
chr7 (28-145)||(49110607-49110725)
chr7 (112-149)||(46321285-46321322)
chr7 (89-145)||(4048871-4048927)
chr7 (82-136)||(38767205-38767259)
chr7 (110-152)||(42662286-42662328)
chr7 (86-136)||(44594666-44594715)
chr7 (93-150)||(19120662-19120719)
chr7 (28-77)||(23707724-23707773)
chr7 (89-137)||(39278476-39278524)
chr7 (117-153)||(46480016-46480052)
[»] chr2 (40 HSPs)
chr2 (36-150)||(36072189-36072304)
chr2 (26-153)||(39358151-39358279)
chr2 (27-153)||(44365163-44365290)
chr2 (36-153)||(11841722-11841840)
chr2 (26-153)||(5405001-5405129)
chr2 (26-153)||(8042151-8042279)
chr2 (26-153)||(19141195-19141323)
chr2 (28-153)||(7608056-7608182)
chr2 (28-153)||(6223073-6223199)
chr2 (26-153)||(2183089-2183214)
chr2 (24-133)||(19262683-19262793)
chr2 (36-153)||(33607391-33607505)
chr2 (30-151)||(7799856-7799978)
chr2 (31-147)||(11931701-11931818)
chr2 (66-152)||(13125275-13125362)
chr2 (37-153)||(36719453-36719565)
chr2 (27-149)||(32774597-32774720)
chr2 (82-152)||(9172276-9172346)
chr2 (32-146)||(16865065-16865180)
chr2 (52-150)||(24251991-24252089)
chr2 (52-150)||(38291983-38292082)
chr2 (82-136)||(42133814-42133868)
chr2 (83-152)||(38839136-38839205)
chr2 (57-149)||(44644906-44644999)
chr2 (57-152)||(22839057-22839153)
chr2 (82-133)||(43444689-43444740)
chr2 (28-129)||(44563150-44563253)
chr2 (92-150)||(31610785-31610843)
chr2 (28-152)||(19165913-19166037)
chr2 (52-127)||(9006939-9007015)
chr2 (82-149)||(13117457-13117524)
chr2 (24-102)||(13598445-13598523)
chr2 (91-152)||(9553851-9553911)
chr2 (111-150)||(24259493-24259532)
chr2 (88-135)||(31904027-31904074)
chr2 (90-130)||(3837271-3837311)
chr2 (92-136)||(4835727-4835771)
chr2 (92-152)||(20387370-20387430)
chr2 (106-152)||(34248561-34248604)
chr2 (92-136)||(36177723-36177767)
[»] chr8 (40 HSPs)
chr8 (24-153)||(14237283-14237413)
chr8 (26-153)||(32998455-32998583)
chr8 (28-153)||(18044432-18044558)
chr8 (26-153)||(132022-132150)
chr8 (26-153)||(42587377-42587505)
chr8 (26-153)||(616788-616916)
chr8 (26-153)||(623181-623309)
chr8 (27-153)||(40494390-40494517)
chr8 (27-153)||(41263816-41263943)
chr8 (28-153)||(38957177-38957303)
chr8 (26-153)||(4270221-4270349)
chr8 (26-153)||(3100624-3100752)
chr8 (27-152)||(2766178-2766304)
chr8 (26-153)||(8394351-8394479)
chr8 (31-153)||(11637792-11637915)
chr8 (36-153)||(13216850-13216968)
chr8 (30-152)||(18090338-18090460)
chr8 (28-153)||(35403523-35403649)
chr8 (26-150)||(5878322-5878446)
chr8 (26-153)||(36641987-36642116)
chr8 (28-153)||(22489402-22489529)
chr8 (26-152)||(38497088-38497204)
chr8 (26-126)||(36167081-36167182)
chr8 (29-136)||(5173259-5173367)
chr8 (90-150)||(40716655-40716715)
chr8 (28-122)||(24524107-24524202)
chr8 (26-150)||(33700205-33700331)
chr8 (28-152)||(6414095-6414220)
chr8 (83-152)||(18035163-18035232)
chr8 (87-152)||(9632222-9632287)
chr8 (52-152)||(40204852-40204953)
chr8 (81-152)||(18020927-18021001)
chr8 (106-150)||(32855594-32855638)
chr8 (101-153)||(38958890-38958942)
chr8 (82-153)||(3370385-3370456)
chr8 (111-150)||(21109818-21109857)
chr8 (82-136)||(24729917-24729971)
chr8 (83-152)||(7430896-7430965)
chr8 (84-136)||(8181959-8182012)
chr8 (28-81)||(13217223-13217276)
[»] chr4 (57 HSPs)
chr4 (26-153)||(17610285-17610413)
chr4 (31-153)||(12240307-12240430)
chr4 (26-153)||(17446762-17446890)
chr4 (26-153)||(26125713-26125841)
chr4 (26-153)||(26169991-26170119)
chr4 (26-153)||(35381023-35381151)
chr4 (26-153)||(47386415-47386543)
chr4 (30-152)||(12625260-12625383)
chr4 (26-153)||(2760859-2760984)
chr4 (26-153)||(29830348-29830476)
chr4 (26-153)||(38416779-38416907)
chr4 (28-151)||(50620813-50620937)
chr4 (26-153)||(55209703-55209831)
chr4 (27-153)||(25296709-25296836)
chr4 (28-153)||(44232206-44232332)
chr4 (28-153)||(25918210-25918336)
chr4 (28-153)||(43967730-43967856)
chr4 (26-153)||(31010219-31010347)
chr4 (26-153)||(54330819-54330947)
chr4 (26-153)||(55191829-55191957)
chr4 (51-153)||(45291862-45291965)
chr4 (26-153)||(38716892-38717022)
chr4 (26-136)||(35686378-35686489)
chr4 (26-152)||(19433488-19433619)
chr4 (48-147)||(19595732-19595832)
chr4 (30-153)||(50205752-50205876)
chr4 (28-153)||(9029578-9029707)
chr4 (93-153)||(4467648-4467708)
chr4 (26-127)||(55800839-55800941)
chr4 (26-137)||(34316526-34316637)
chr4 (26-152)||(3036985-3037112)
chr4 (26-136)||(38721342-38721453)
chr4 (27-136)||(54610868-54610979)
chr4 (28-145)||(36523105-36523223)
chr4 (28-144)||(7614622-7614739)
chr4 (82-150)||(14144589-14144657)
chr4 (86-150)||(50181126-50181190)
chr4 (86-152)||(55091317-55091383)
chr4 (36-150)||(2571014-2571129)
chr4 (58-152)||(32871489-32871584)
chr4 (28-150)||(39307703-39307826)
chr4 (26-153)||(37767087-37767215)
chr4 (52-150)||(20875379-20875478)
chr4 (82-152)||(19903780-19903850)
chr4 (93-152)||(27407747-27407808)
chr4 (28-131)||(29051691-29051793)
chr4 (26-152)||(10550429-10550555)
chr4 (93-153)||(30446370-30446430)
chr4 (82-150)||(56297834-56297902)
chr4 (92-147)||(27344083-27344138)
chr4 (92-147)||(34323143-34323198)
chr4 (82-130)||(53304487-53304535)
chr4 (52-150)||(29585977-29586075)
chr4 (82-145)||(43968232-43968295)
chr4 (36-136)||(23360193-23360291)
chr4 (106-136)||(34652162-34652192)
chr4 (93-130)||(51456506-51456543)
[»] chr6 (39 HSPs)
chr6 (27-153)||(22054778-22054905)
chr6 (26-153)||(18668817-18668945)
chr6 (26-153)||(32414808-32414936)
chr6 (26-153)||(4147936-4148064)
chr6 (26-153)||(19088087-19088215)
chr6 (26-153)||(32671821-32671949)
chr6 (31-153)||(20226427-20226550)
chr6 (31-153)||(22120411-22120534)
chr6 (26-151)||(24624072-24624198)
chr6 (26-153)||(6563231-6563359)
chr6 (28-153)||(15383059-15383185)
chr6 (26-150)||(17213916-17214041)
chr6 (28-153)||(20437142-20437269)
chr6 (36-153)||(3989393-3989510)
chr6 (49-153)||(24955525-24955630)
chr6 (31-149)||(17257784-17257903)
chr6 (51-153)||(1040854-1040957)
chr6 (26-153)||(25475942-25476065)
chr6 (36-153)||(21540758-21540876)
chr6 (66-152)||(12226020-12226107)
chr6 (28-152)||(10520475-10520600)
chr6 (52-136)||(15337519-15337604)
chr6 (29-133)||(31569175-31569280)
chr6 (29-136)||(3623856-3623963)
chr6 (82-150)||(23158041-23158109)
chr6 (82-145)||(5495311-5495374)
chr6 (88-147)||(8101668-8101727)
chr6 (81-152)||(10298703-10298774)
chr6 (82-145)||(28477815-28477878)
chr6 (27-152)||(4440856-4440982)
chr6 (88-145)||(29790274-29790331)
chr6 (82-152)||(29693945-29694015)
chr6 (82-136)||(31869770-31869824)
chr6 (93-149)||(2360063-2360119)
chr6 (111-150)||(16193014-16193053)
chr6 (82-133)||(19240741-19240792)
chr6 (82-133)||(1260492-1260543)
chr6 (30-136)||(17155158-17155265)
chr6 (30-130)||(14214065-14214166)
[»] chr3 (45 HSPs)
chr3 (26-153)||(39866270-39866398)
chr3 (26-153)||(13499464-13499592)
chr3 (26-153)||(42490325-42490453)
chr3 (26-153)||(42761612-42761740)
chr3 (27-153)||(21797562-21797689)
chr3 (26-153)||(20765201-20765329)
chr3 (26-153)||(27010603-27010731)
chr3 (26-153)||(36227550-36227678)
chr3 (24-145)||(54507644-54507766)
chr3 (28-152)||(27334861-27334986)
chr3 (29-152)||(6910342-6910466)
chr3 (26-153)||(33415804-33415932)
chr3 (27-150)||(38137830-38137954)
chr3 (59-153)||(30213842-30213937)
chr3 (26-136)||(34912288-34912399)
chr3 (26-153)||(21005298-21005426)
chr3 (36-149)||(33803536-33803651)
chr3 (27-153)||(43467871-43467998)
chr3 (26-153)||(19823905-19824028)
chr3 (28-153)||(43181484-43181611)
chr3 (31-152)||(15332936-15333058)
chr3 (31-152)||(41252896-41253015)
chr3 (82-152)||(41751540-41751610)
chr3 (92-152)||(48334651-48334710)
chr3 (52-152)||(3430407-3430505)
chr3 (81-152)||(15568065-15568136)
chr3 (82-150)||(52167271-52167339)
chr3 (88-137)||(25527472-25527521)
chr3 (57-152)||(44561820-44561916)
chr3 (82-152)||(33128049-33128119)
chr3 (28-109)||(45613580-45613662)
chr3 (89-150)||(41943283-41943344)
chr3 (86-152)||(47164585-47164649)
chr3 (81-133)||(15664094-15664146)
chr3 (89-133)||(17643800-17643844)
chr3 (90-149)||(22786700-22786757)
chr3 (113-153)||(28690338-28690378)
chr3 (88-151)||(30057367-30057430)
chr3 (118-153)||(32220931-32220966)
chr3 (90-136)||(23940508-23940554)
chr3 (82-131)||(3017853-3017902)
chr3 (75-136)||(55264659-55264720)
chr3 (90-149)||(22782336-22782393)
chr3 (92-132)||(23224306-23224346)
chr3 (89-125)||(27813445-27813481)
[»] chr1 (41 HSPs)
chr1 (26-153)||(40771901-40772029)
chr1 (26-153)||(6402539-6402667)
chr1 (26-153)||(11641196-11641324)
chr1 (26-149)||(16120573-16120697)
chr1 (26-153)||(17305959-17306087)
chr1 (26-153)||(27292645-27292773)
chr1 (26-153)||(30701723-30701851)
chr1 (26-153)||(42788671-42788799)
chr1 (28-153)||(9342774-9342900)
chr1 (28-149)||(30003540-30003662)
chr1 (28-153)||(36399105-36399231)
chr1 (36-153)||(36757615-36757733)
chr1 (26-153)||(24321264-24321394)
chr1 (26-149)||(40977621-40977745)
chr1 (26-153)||(52024031-52024159)
chr1 (26-153)||(6766377-6766502)
chr1 (36-152)||(15912466-15912583)
chr1 (28-153)||(42735294-42735423)
chr1 (31-152)||(3485337-3485459)
chr1 (26-149)||(26910081-26910205)
chr1 (66-153)||(42367425-42367513)
chr1 (27-136)||(4302124-4302234)
chr1 (37-145)||(48375018-48375127)
chr1 (26-136)||(44647859-44647970)
chr1 (86-145)||(22575724-22575783)
chr1 (27-152)||(40800517-40800643)
chr1 (27-152)||(15382556-15382682)
chr1 (26-127)||(44644510-44644612)
chr1 (36-152)||(38153407-38153524)
chr1 (82-145)||(14777094-14777157)
chr1 (106-153)||(25171240-25171287)
chr1 (83-150)||(31444986-31445053)
chr1 (82-136)||(30385291-30385345)
chr1 (52-150)||(16689855-16689951)
chr1 (82-132)||(34634969-34635019)
chr1 (28-136)||(27984563-27984671)
chr1 (81-137)||(51021007-51021064)
chr1 (50-133)||(28030830-28030914)
chr1 (93-147)||(7568621-7568675)
chr1 (88-149)||(9881344-9881405)
chr1 (106-150)||(44452120-44452164)
[»] chr5 (35 HSPs)
chr5 (26-153)||(978082-978210)
chr5 (26-153)||(9502756-9502884)
chr5 (26-153)||(33387225-33387353)
chr5 (25-153)||(14634286-14634415)
chr5 (26-153)||(8086159-8086287)
chr5 (31-150)||(33587601-33587721)
chr5 (30-153)||(3472406-3472530)
chr5 (26-153)||(40156203-40156331)
chr5 (36-153)||(11251129-11251247)
chr5 (26-153)||(18094210-18094338)
chr5 (30-153)||(30355003-30355127)
chr5 (36-153)||(27109704-27109821)
chr5 (26-150)||(24992270-24992395)
chr5 (31-153)||(7224175-7224298)
chr5 (36-151)||(11785856-11785973)
chr5 (93-152)||(9050706-9050765)
chr5 (82-150)||(11761128-11761196)
chr5 (27-153)||(34111968-34112090)
chr5 (26-136)||(32017218-32017329)
chr5 (26-152)||(38916380-38916507)
chr5 (52-149)||(12456773-12456871)
chr5 (92-150)||(24916378-24916436)
chr5 (92-150)||(32400399-32400457)
chr5 (74-153)||(12447547-12447625)
chr5 (88-152)||(18998755-18998819)
chr5 (92-149)||(3422343-3422400)
chr5 (89-150)||(27579562-27579623)
chr5 (26-153)||(12007761-12007889)
chr5 (92-152)||(12359951-12360011)
chr5 (62-152)||(6996022-6996112)
chr5 (82-144)||(26387017-26387079)
chr5 (82-122)||(37495672-37495712)
chr5 (32-129)||(13812058-13812156)
chr5 (93-137)||(39776703-39776747)
chr5 (92-136)||(17476949-17476993)
[»] scaffold0018 (1 HSPs)
scaffold0018 (30-153)||(67898-68022)
[»] scaffold0056 (1 HSPs)
scaffold0056 (26-150)||(70966-71090)
[»] scaffold0022 (1 HSPs)
scaffold0022 (26-153)||(100776-100904)
[»] scaffold0295 (2 HSPs)
scaffold0295 (26-153)||(13846-13974)
scaffold0295 (26-81)||(9377-9432)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-153)||(161966-162094)
[»] scaffold0225 (1 HSPs)
scaffold0225 (52-150)||(8965-9064)
[»] scaffold0029 (1 HSPs)
scaffold0029 (52-150)||(138162-138261)
[»] scaffold0262 (1 HSPs)
scaffold0262 (52-150)||(22811-22910)
[»] scaffold0608 (1 HSPs)
scaffold0608 (86-150)||(1586-1650)
[»] scaffold0009 (2 HSPs)
scaffold0009 (82-152)||(53550-53620)
scaffold0009 (92-150)||(217007-217065)
[»] scaffold0099 (1 HSPs)
scaffold0099 (82-149)||(28784-28852)
[»] scaffold0595 (1 HSPs)
scaffold0595 (82-152)||(4010-4081)
[»] scaffold0002 (1 HSPs)
scaffold0002 (111-150)||(315634-315673)
[»] scaffold0193 (1 HSPs)
scaffold0193 (52-152)||(20490-20592)


Alignment Details
Target: chr7 (Bit Score: 179; Significance: 2e-96; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 216 - 422
Target Start/End: Original strand, 36585304 - 36585510
Alignment:
Q  216 cttcagcaggaggtattttcaaaaactctgaaggcatatgtataggttgcttttcacaattcttaggtaatgagaacgctttatttgctgagttagtggc 315  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36585304 cttcagcagaaggtattttcataaactctgaaggcatatgtataggttgcttttcacaattcttaggtaatgagaacgctttatttgctgagttagtggc 36585403  T
Q  316 tgcaatgtctgcaatagaaattgctcatcaaaaaggtttttataatctctggctagagtctgattctcagcttgttattttgcccttcaaatcaaactca 415  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  36585404 tgcaatgtctgcaatagaaattgctcatcataaaggttttcataatctcttgctagagtctgattctcagcttgttattttggtcttcaaatcaaactca 36585503  T
Q  416 gtggttc 422  Q
    |||||||    
T  36585504 gtggttc 36585510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 20885108 - 20885236
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  20885108 cctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagc 20885207  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  20885208 atgtaagatgttgtttgatttgtctcgac 20885236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 40090175 - 40090047
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  40090175 cctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 40090076  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| |||||||| |||||||    
T  40090075 atgtaagatgttgtttgatttatctcgac 40090047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 42890598 - 42890472
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||||||||||||||||| || |||| |||||||||||| |||||||||||||||||||||    
T  42890598 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatattagcat 42890499  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  42890498 gtaagatgttgtttgatttgtctcgac 42890472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 44732023 - 44732145
Alignment:
Q  32 ttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaa 130  Q
    |||||||||| |||| |||||||| |||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44732023 ttttaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaa 44732122  T
Q  131 gatgttctttgatttgtctcgac 153  Q
    |||||| ||||||||||||||||    
T  44732123 gatgttgtttgatttgtctcgac 44732145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 28061772 - 28061644
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  28061772 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 28061673  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  28061672 atgtaagatgttgtttgatttgtctcgac 28061644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 36623313 - 36623441
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  36623313 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 36623412  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  36623413 atgtaagatgttgtttgatttgtctcgac 36623441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 41897993 - 41898121
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  41897993 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagc 41898092  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||| ||||||||||||    
T  41898093 atgtaagatgttgtttcatttgtctcgac 41898121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 47156032 - 47156160
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  47156032 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 47156131  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  47156132 atgtaagatgttgtttgatttgtctcgac 47156160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 48602441 - 48602569
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||| ||||||||| |||| |||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  48602441 cctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagc 48602540  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  48602541 atgtaagatgttgtttgatttgtctcgac 48602569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 40256063 - 40256190
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  40256063 ctccgtttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 40256162  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||||||||||||||||    
T  40256163 tgtaagatgttgtttgatttgtctcgac 40256190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 153
Target Start/End: Original strand, 7438907 - 7439036
Alignment:
Q  25 tcctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattag 123  Q
    ||||| |||| |||||| ||||| ||||||| ||||||||| |||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  7438907 tcctctgtttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattag 7439006  T
Q  124 catgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||||| ||||||||||||||||    
T  7439007 catgtaagatgttgtttgatttgtctcgac 7439036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 16778510 - 16778638
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||| |||| |||| ||||||||||| ||| |||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  16778510 cctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaatattagc 16778609  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  16778610 atgtaagatgttgtttgatttgtctcgac 16778638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 38852104 - 38851976
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  38852104 cctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 38852005  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||| || ||||||||||||||||    
T  38852004 atgtaagatattgtttgatttgtctcgac 38851976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 32431615 - 32431488
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||||||||| ||||||| |||| |||| |||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||     
T  32431615 cctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagt 32431516  T
Q  125 atgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||| |||||||||||||||    
T  32431515 atgtaagatgttgtttgatttgtctcga 32431488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 36585112 - 36585242
Alignment:
Q  24 ttcctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttatttg-atcatattttttaactaatgtataaatacaaatatta 122  Q
    ||||||||||| |||||| || |||||||||| |||| ||||||||||| |||||||||||  | |||| |||| |||||||||||||||||||||||||    
T  36585112 ttcctccgtttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaatatta 36585211  T
Q  123 gcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||||| ||||||||||||||||    
T  36585212 gcatgtaagatgttgtttgatttgtctcgac 36585242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 39130181 - 39130055
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||| || |  ||||||| |||| ||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  39130181 tccgttttaaaatacatctttaatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatattagcat 39130082  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  39130081 gtaagatgttgtttgatttgtctcgac 39130055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 35117131 - 35117258
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||||||||||  ||| |||||||| |||||||||||||||| |||||||| ||||| |||| |||| |||||||||||||||| ||||||||||    
T  35117131 cctccgttttaaaatacctgttcaatttttgcaatatgcactattcacttgacttactttgaccatactttt-aactaatgtataaatataaatattagc 35117229  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  35117230 atgtaagatgttgtttgatttgtctcgac 35117258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 41134738 - 41134617
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||| |||| ||||||||||||| || ||||||||||||||||| ||||| ||||     ||||||||||||||||||||||||||||||    
T  41134738 tccgttttaaaatacatgttcaatttttacaatgtgtactattcatttgacttactttgaccata-----taactaatgtataaatacaaatattagcat 41134644  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  41134643 gtaagatgttgtttgatttgtctcgac 41134617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 6174843 - 6174952
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttatt-tgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||||||||||||||||| |||  |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||||    
T  6174843 tccgtttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacattagcat 6174942  T
Q  127 gtaagatgtt 136  Q
    ||||||||||    
T  6174943 gtaagatgtt 6174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 25566803 - 25566680
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| |||||||| ||||| |||| ||| |||||||||||| ||||||||||||||||    
T  25566803 ctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaatattagca 25566705  T
Q  126 tgtaagatgttctttgatttgtctc 150  Q
    ||| ||||||| |||||||||||||    
T  25566704 tgtgagatgttgtttgatttgtctc 25566680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 41088592 - 41088720
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| ||| |||||| |||||||| |||||||||||||||| ||||| ||||||| ||||| ||||||||||||||||||||||||| ||||||||| |    
T  41088592 cctccatttcaaaatacatgtccaaattttacaatatgcactgttcatctgacttactttgaccatattttttaactaatgtataaatgcaaatattaac 41088691  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||||   ||||||||||||||    
T  41088692 atgtaagatgttgcatgatttgtctcgac 41088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 46479838 - 46479962
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| ||||  |||||||||||| ||||||||||  |||||||| ||||| || | ||||||||||||||||||||||||||||||||||||    
T  46479838 cgtttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgt 46479937  T
Q  129 aagatgttctttgatttgtctcgac 153  Q
    |||||||| ||||||||||||||||    
T  46479938 aagatgttgtttgatttgtctcgac 46479962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 42877391 - 42877516
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||| ||||  ||| ||||||||| |||| ||||| ||||| |||| ||||||||||||||||||||| |||||||||     
T  42877391 cctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaatattaga 42877490  T
Q  125 atgtaagatgttctttgatttgtctc 150  Q
    |||||||||||| |||||||||||||    
T  42877491 atgtaagatgttgtttgatttgtctc 42877516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 2198607 - 2198735
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||||  ||| ||| |||| || ||||||||| ||| |||||| || |||| |||||||||||||||||||||||||||||| |    
T  2198607 cctccgttttaaaatagatgtgtaatatttgcaatgtgtactattcatctgatttattttgaacatactttttaactaatgtataaatacaaatattaac 2198706  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    | |||||||||| ||||||||||||||||    
T  2198707 aagtaagatgttgtttgatttgtctcgac 2198735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 6766807 - 6766680
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||  | ||||||||| |||| ||||||  | |||||||| || ||||||||||||||||||||||||| ||||| |||||    
T  6766807 cctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaatgttagc 6766708  T
Q  125 atgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||| |||||||||||||||    
T  6766707 atgtaagatgttgtttgatttgtctcga 6766680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 11502832 - 11502713
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| |||||| |||||||||||||  ||| |||| |||| | || ||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  11502832 gtttcaaaatacatgtccaatttttgtaatgtgcattattgacttaacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 11502733  T
Q  130 agatgttctttgatttgtct 149  Q
    ||||||  ||||||||||||    
T  11502732 agatgtcgtttgatttgtct 11502713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 46103620 - 46103499
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||||||||||||| ||||||       ||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  46103620 cctccgtttcaaaatacatgtccaatttttacaatgtgcact-------tgacttactttgaccatactttttaactaatatataaatacaaatattagc 46103528  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| |||||||||| |||||    
T  46103527 atgtaagatgttgtttgatttgtttcgac 46103499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 30342081 - 30342206
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||| |||  |||||||| |||| |||| |||||| |||| ||| |||||  ||| ||||||||||||||||||||||||||||||| ||    
T  30342081 tccgttttaaaatacatgatcaatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtat 30342180  T
Q  127 gtaagatgttctttgatttgtctcga 152  Q
    |||||||||  |||||||||||||||    
T  30342181 gtaagatgtcgtttgatttgtctcga 30342206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 5788597 - 5788506
Alignment:
Q  63 gcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| |||||||| ||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  5788597 gcactattcaattgacttactttaatcatacttttttactaatgtataaatacaaatattagtatgtaagatgttgtttgatttgtctcgac 5788506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 8683827 - 8683945
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    |||||||||||| |||||||||||||  ||| |||| |||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||||||       
T  8683827 cgttttaaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca--- 8683923  T
Q  129 aagatgttctttgatttgtctc 150  Q
    |||||||| |||||||||||||    
T  8683924 aagatgttgtttgatttgtctc 8683945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 7457976 - 7457868
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| ||||| || |||| |||| ||||||||||| || ||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  7457976 tccgtttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaatattagcat 7457878  T
Q  127 gtaagatgtt 136  Q
    ||||||||||    
T  7457877 gtaagatgtt 7457868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 49102044 - 49101943
Alignment:
Q  52 ttttacaatatgcactattcatttgacttatttga-tcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||||||||||| | ||||||||   ||||||||||||||||||  |||||||||||| || |||||||||||||| |||||||||||||    
T  49102044 ttttacaatatgcactattcatataacttatttttgtcatattttttaactaatacataaatacaaatttttgcatgtaagatgttgtttgatttgtctc 49101945  T
Q  151 ga 152  Q
    ||    
T  49101944 ga 49101943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 21379816 - 21379877
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21379816 ttttttagctaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctcgac 21379877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 3851092 - 3851207
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||||||||||||||||| |||| ||||   |||| |||||||| |||||  ||| |||||||||||||||||||||||||||||| || |||||||     
T  3851092 aaaatatatgtccaatttttgcaatgtgca---ttcacttgacttactttgacaatactttttaactaatgtataaatacaaatattaacacgtaagata 3851188  T
Q  135 ttctttgatttgtctcgac 153  Q
    || ||||||||||| ||||    
T  3851189 ttgtttgatttgtcccgac 3851207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 4131758 - 4131635
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| ||||||||||||  | ||||||||| |  ||||||||  | ||||| ||| | ||||||||||||||||| ||||||||||||  |||||||    
T  4131758 tccgtttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagcat 4131659  T
Q  127 gtaagatgttctttgatttgtctc 150  Q
    |||||||||| |||||||||||||    
T  4131658 gtaagatgttgtttgatttgtctc 4131635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 23707612 - 23707552
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgtgagatattatttgatttgtctcgac 23707552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 46322222 - 46322127
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatat 120  Q
    ||||| ||| |||||| ||||||||||||| |||| |||| |||||| |||||||| ||||| |||| |||||||||||||||| |||||||||||    
T  46322222 cctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaatat 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 16870711 - 16870610
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||||||||||  | ||||| ||||| ||||||| ||||||||| |||||||| |||| || ||| |||| ||||| |||||||||||||    
T  16870711 ttttacaatatgcactattcaaataacttactttgaccatatttgttaactaatatataaatataaatgtttgcacgtaaaatgttatttgatttgtctc 16870612  T
Q  151 ga 152  Q
    ||    
T  16870611 ga 16870610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 47526092 - 47525969
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatatttttt-aactaatgtataaatacaaatattagca 125  Q
    ||||||||||||||||||||  | ||||||| |||||| |||| |  |  |||| |||||||||||||||| ||||||| ||||||||||||| ||||||    
T  47526092 tccgttttaaaatatatgtcgcaattttacattatgcattatttacctagcttactttgatcatatttttttaactaatatataaatacaaatgttagca 47525993  T
Q  126 tgtaagatgttctttgatttgtct 149  Q
    | |||||| || || |||||||||    
T  47525992 tttaagatcttgttcgatttgtct 47525969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 3785523 - 3785649
Alignment:
Q  24 ttcctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatatta 122  Q
    ||||||||||| |||||| || ||  | ||| |||||||||||||||||| |   ||| ||||| ||||||||||||||||| ||||||||||||| |||    
T  3785523 ttcctccgtttcaaaatacatatcataatttcacaatatgcactattcatatagtttactttgaccatattttttaactaatatataaatacaaatgtta 3785622  T
Q  123 gcatgtaagatgttctttgatttgtct 149  Q
    | ||  | |||||| ||||||||||||    
T  3785623 gtatacaggatgttgtttgatttgtct 3785649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 27045608 - 27045538
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||| ||||| |||||    
T  27045608 tttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtttaatttgcctcga 27045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 5529080 - 5529141
Alignment:
Q  89 atattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||||| || ||||| |||| ||||||||||||||||| |||||||||||||    
T  5529080 atattttttaactaatatacaaataaaaatgttagcatgtaagatgttatttgatttgtctc 5529141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 35570239 - 35570179
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||| || |||||||||| ||||||||||||||||| |  ||||||||||||    
T  35570239 ttttttaactaatatacaaatacaaattttagcatgtaagatgttgtacgatttgtctcga 35570179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 7169195 - 7169242
Alignment:
Q  89 atattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  7169195 atattttttaactaatatataaatacaaatattaacatataagatgtt 7169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 26161669 - 26161712
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    |||||||||||| ||||||||||||||||||||||||| |||||    
T  26161669 tttttaactaatatataaatacaaatattagcatgtaaaatgtt 26161712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 36341629 - 36341747
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttatttgatc-atattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| |||||  |||||| |||| |||||||||||  ||||||| || | | ||| |||||||||||  |||||||| |||| |||| ||||    
T  36341629 cgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatgttagaatgt 36341728  T
Q  129 aagatgttctttgatttgt 147  Q
    |||||||| || |||||||    
T  36341729 aagatgttgttcgatttgt 36341747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 37467501 - 37467444
Alignment:
Q  88 catattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttg 146  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||| || |||||||||    
T  37467501 catattttttaactaatatataaatacaaatgttagcatttaagat-ttgtttgatttg 37467444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 49110725 - 49110607
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||| |||||  | ||||| ||| || ||||||||  ||| ||| ||||| ||||||||||||||||| ||| ||||||||| |||  ||    
T  49110725 tccgttttaaaatacatgtcacaattttataatgtgtactattcaaatgatttactttgaccatattttttaactaatatattaatacaaatgttatgat 49110626  T
Q  127 gtaagatgttctttgattt 145  Q
    |||| || || ||||||||    
T  49110625 gtaaaatattgtttgattt 49110607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 46321322 - 46321285
Alignment:
Q  112 tacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  46321322 tacaaatattagcatgtaagatgttatttgatttgtct 46321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 4048927 - 4048871
Alignment:
Q  89 atattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgattt 145  Q
    |||||||||||||||| |||||||||||||  |||| |||||| |||| ||||||||    
T  4048927 atattttttaactaatatataaatacaaatgctagcttgtaagttgttgtttgattt 4048871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 38767259 - 38767205
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||| ||||||||||||||||| ||||||||||||| | || || |||||||||    
T  38767259 tttgaccatattttttaactaatatataaatacaaatgtcagtatataagatgtt 38767205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 42662286 - 42662328
Alignment:
Q  110 aatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||| |||||||||||| ||||||||| |||||||||||||||    
T  42662286 aatataaatattagcatataagatgttatttgatttgtctcga 42662328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 44594715 - 44594666
Alignment:
Q  86 atcatattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||||||||||||||||| ||||||||| ||| ||||||| |||||||||    
T  44594715 atcatattttttaactaatatataaatac-aatgttagcatataagatgtt 44594666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 19120719 - 19120662
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||||| |||| |||||||| ||||||||||||||||||| ||  |||| |||||||    
T  19120719 tttttaattaatatataaatataaatattagcatgtaagatattggttgacttgtctc 19120662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 23707773 - 23707724
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttga 77  Q
    ||||||||||||||||||  |||||||| |||| ||| ||||||||||||    
T  23707773 tccgttttaaaatatatgatcaatttttgcaatttgcgctattcatttga 23707724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 39278524 - 39278476
Alignment:
Q  89 atattttttaactaatgtataaatacaaatattagcatgtaagatgttc 137  Q
    |||||||||||||||| |||||||| |||| |||| |||||| ||||||    
T  39278524 atattttttaactaatatataaatataaatgttagtatgtaaaatgttc 39278476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 46480016 - 46480052
Alignment:
Q  117 atattagcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  46480016 atattaacatgtaagatgttgtttgatttgtctcgac 46480052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 6e-47; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 36072189 - 36072304
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36072189 aaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagcatgtaagatg 36072288  T
Q  135 ttctttgatttgtctc 150  Q
    || |||||||||||||    
T  36072289 ttatttgatttgtctc 36072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 39358151 - 39358279
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  39358151 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 39358250  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||||||||||||||||||||    
T  39358251 atgtaagatgttctttgatttgtctcgac 39358279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 44365163 - 44365290
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  44365163 ctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 44365262  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||||||||||||||||    
T  44365263 tgtaagatgttgtttgatttgtctcgac 44365290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 11841840 - 11841722
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  11841840 aaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 11841741  T
Q  135 ttctttgatttgtctcgac 153  Q
    || ||||||||||||||||    
T  11841740 ttgtttgatttgtctcgac 11841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 5405001 - 5405129
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  5405001 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 5405100  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  5405101 atgtaagatgttgtttgatttgtctcgac 5405129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 8042279 - 8042151
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  8042279 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 8042180  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  8042179 atgtaagatgttgtttgatttgtctcgac 8042151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 19141323 - 19141195
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  19141323 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 19141224  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  19141223 atgtaagatgttgtttgatttgtctcgac 19141195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 7608056 - 7608182
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||||    
T  7608056 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 7608155  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  7608156 gtaagatgttgtttgatttgtctcgac 7608182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 6223073 - 6223199
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| |||| |||||||| |||| ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||    
T  6223073 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcat 6223172  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||| | ||||||||||||||||    
T  6223173 gtaagatgatgtttgatttgtctcgac 6223199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 2183214 - 2183089
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||||||| |||||||||||||||    
T  2183214 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaatattagc 2183115  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||   ||||||||||||||||    
T  2183114 atgtaagatg---tttgatttgtctcgac 2183089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 19262683 - 19262793
Alignment:
Q  24 ttcctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatatta 122  Q
    ||||||||||| |||||| ||||||||||||| |||| ||||||||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  19262683 ttcctccgtttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaatatta 19262782  T
Q  123 gcatgtaagat 133  Q
    |||||||||||    
T  19262783 gcatgtaagat 19262793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 33607391 - 33607505
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    ||||||||||    
T  33607391 aaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaatat----atgtaagatg 33607486  T
Q  135 ttctttgatttgtctcgac 153  Q
    || ||| ||||||||||||    
T  33607487 ttgttttatttgtctcgac 33607505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 7799856 - 7799978
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| |||||  |||||| |||| |||||||||||  ||||||| ||||| | || |||||||||||| ||||||||||||| |||||||||    
T  7799856 cgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatgttagcatgt 7799955  T
Q  129 aagatgttctttgatttgtctcg 151  Q
    |||||||| ||||||||||||||    
T  7799956 aagatgttgtttgatttgtctcg 7799978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 11931701 - 11931818
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| |||||| |||||  | |||||||||||||| ||||||| | ||||| ||||| ||||||||||||||||| ||||||||||||| ||||||| ||    
T  11931701 gtttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcattta 11931800  T
Q  130 agatgttctttgatttgt 147  Q
    ||||||| ||||||||||    
T  11931801 agatgttgtttgatttgt 11931818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 13125362 - 13125275
Alignment:
Q  66 ctattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||| |||||||| ||| | ||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||    
T  13125362 ctattcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgtttgatttgtctcga 13125275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 36719565 - 36719453
Alignment:
Q  37 aaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgt 135  Q
    ||||| ||||||||||||| ||| | |||||||||| |||||||| ||||| |||| |||||||     |||||||||||||||||||||| ||||||||    
T  36719565 aaatacatgtccaatttttgcaacaagcactattcacttgacttactttgaccatactttttaa-----gtataaatacaaatattagcatttaagatgt 36719471  T
Q  136 tctttgatttgtctcgac 153  Q
    | ||||||||||||||||    
T  36719470 tgtttgatttgtctcgac 36719453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 32774597 - 32774720
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| |||| ||| ||||| ||| ||||||||| | |||||||| ||||| |||| |||||||||||| |||| ||| ||||||||  |    
T  32774597 ctccgtttcaaaatacatgttcaagttttataatgtgcactatttacttgacttactttgaccatactttttaactaatatatacatataaatattaata 32774696  T
Q  126 tgtaagatgttctttgatttgtct 149  Q
    ||||||||||| ||||||||||||    
T  32774697 tgtaagatgttgtttgatttgtct 32774720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 9172346 - 9172276
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| |||||    
T  9172346 tttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgtttgatttgcctcga 9172276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 16865065 - 16865180
Alignment:
Q  32 ttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaa 130  Q
    |||||||||| |||||  ||||||||||||| || ||||||| ||||||| |||||  ||| |||||||||||  ||||||||||||| |||||||||||    
T  16865065 ttttaaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatgttagcatgtaa 16865164  T
Q  131 gatgttctttgatttg 146  Q
    | |||| || ||||||    
T  16865165 gttgttgttcgatttg 16865180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 24251991 - 24252089
Alignment:
Q  52 ttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||| | ||||||  | |||||||| || ||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||    
T  24251991 ttttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaatacaaatgttagcatgtaa-atgttgtttgatttgtctc 24252089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 38291983 - 38292082
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||| ||||| ||||||  | ||||| ||||| ||||||||||||||| | ||||||||||||| ||| ||||||||||||| |||||||||||||    
T  38291983 ttttacaacatgcattattcagataacttactttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 38292082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 42133814 - 42133868
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  42133814 tttgatcatattttttaactaatatataaatacaaatgttagcatgaaagatgtt 42133868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 38839136 - 38839205
Alignment:
Q  83 ttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||| | |||||| ||||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtatgatttctctcga 38839205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 44644906 - 44644999
Alignment:
Q  57 caatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    |||| ||||||||||| ||| |||| ||||| |||| |||||||||||| |||||||| |||||||| ||| ||||||||| ||| ||||||||    
T  44644906 caatgtgcactattcaattgtcttactttgaccatactttttaactaatatataaatataaatattaacatataagatgttgtttaatttgtct 44644999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 152
Target Start/End: Complemental strand, 22839153 - 22839057
Alignment:
Q  57 caatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||| |||||||||||  | ||||| ||||| ||||||||||||||| | |||||||  |||| ||||||| ||||||||| |||||||||||||||    
T  22839153 caatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgtttgatttgtctcga 22839057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 43444740 - 43444689
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagat 133  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  43444740 tttgaccatattttttaactaatatataaatacaaatgttagcatgtaagat 43444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 44563253 - 44563150
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcata-ttttttaactaatgtataaatacaaatattagca 125  Q
    ||||||||||| || |||||  | ||||| |||||||||||||||| | ||||| |||||||||| |||||||| |||| |||||||||| || ||||||    
T  44563253 tccgttttaaattacatgtcgcaattttataatatgcactattcatataacttactttgatcatatttttttaattaatatataaatacatatgttagca 44563154  T
Q  126 tgta 129  Q
    ||||    
T  44563153 tgta 44563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 31610843 - 31610785
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||||||||||| ||||||||||||| |||| |||||||| ||| |||||||||||||    
T  31610843 ttttttaactaatatataaatacaaatgttagaatgtaagacgttgtttgatttgtctc 31610785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 19166037 - 19165913
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||||||||||||||||   ||||| |||| |||| ||||||  |||||| ||| ||||||  ||||||| |||| ||||||||||| | ||| |||    
T  19166037 tccgttttaaaatatatgtcgcgtttttgcaatgtgca-tattcacatgacttgttttgatcatggtttttaattaatatataaatacaattgttatcat 19165939  T
Q  127 gtaagatgttctttgatttgtctcga 152  Q
    |||||||||| ||| |||||| ||||    
T  19165938 gtaagatgttgtttaatttgtttcga 19165913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 9007015 - 9006939
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatg 127  Q
    ||||||||| |||| ||||||| |  |||| ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  9007015 ttttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaatgttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 13117524 - 13117457
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||| |||||||||||||| || |||||||| ||||||||| || ||||||||| || |||||||||    
T  13117524 tttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgttcgatttgtct 13117457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 13598445 - 13598523
Alignment:
Q  24 ttcctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaacta 102  Q
    |||||||||||||||||||||||   |||||| |||| |||||||||||| ||||||| ||||| |||| ||||||||||    
T  13598445 ttcctccgttttaaaatatatgttgcattttt-caatgtgcactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 9553911 - 9553851
Alignment:
Q  91 attttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||||| ||||||| ||||||||| ||||||| ||||| || ||||||||||||    
T  9553911 attttttaactaatatataaat-caaatattaacatgtaaaatgttgttcgatttgtctcga 9553851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 24259532 - 24259493
Alignment:
Q  111 atacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  24259532 atacaaatgttagcatgtaagatgttgtttgatttgtctc 24259493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 31904074 - 31904027
Alignment:
Q  88 catattttttaactaatgtataaatacaaatattagcatgtaagatgt 135  Q
    ||||||||||||||||| |||||||| |||||||| || |||||||||    
T  31904074 catattttttaactaatatataaatataaatattatcacgtaagatgt 31904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 3837311 - 3837271
Alignment:
Q  90 tattttttaactaatgtataaatacaaatattagcatgtaa 130  Q
    ||||||||||||||| |||||||| |||||| |||||||||    
T  3837311 tattttttaactaatatataaatataaatatcagcatgtaa 3837271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 4835727 - 4835771
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||||||||||| ||||||||||||| ||| ||| |||||||||    
T  4835727 ttttttaactaatatataaatacaaatgttaacatataagatgtt 4835771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 20387430 - 20387370
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||| | ||  || |||| ||||||||||||||||| |||||||||| ||||    
T  20387430 ttttttaactaatatttatgtataaatgttagcatgtaagatgttgtttgatttgtttcga 20387370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 34248561 - 34248604
Alignment:
Q  106 tataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||| |||||||||||||||   |||||||||||||||    
T  34248561 tataaatacaaatgttagcatgtaagatg---tttgatttgtctcga 34248604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 36177767 - 36177723
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||||||||||| |||||||| |||||||| ||| |||||||||    
T  36177767 ttttttaactaatatataaataaaaatattaacatctaagatgtt 36177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 3e-46; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 14237283 - 14237413
Alignment:
Q  24 ttcctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatatta 122  Q
    ||||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  14237283 ttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatta 14237382  T
Q  123 gcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||||| ||||||||||||||||    
T  14237383 gcatgtaagatgttgtttgatttgtctcgac 14237413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 32998455 - 32998583
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  32998455 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagc 32998554  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  32998555 atgtaagatgttgtttgatttgtctcgac 32998583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 18044432 - 18044558
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  18044432 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcat 18044531  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  18044532 gtaagatgttgtttgatttgtctcgac 18044558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 132022 - 132150
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||| ||||| |||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  132022 cctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagc 132121  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  132122 atgtaagatgttgtttgatttgtctcgac 132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 42587505 - 42587377
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  42587505 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 42587406  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  42587405 atgtaagatgttgtttgatttgtctcgac 42587377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 616788 - 616916
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  616788 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 616887  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  616888 atgtaagatgttgtttgatttgtctcgac 616916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 623181 - 623309
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  623181 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 623280  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  623281 atgtaagatgttgtttgatttgtctcgac 623309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 40494390 - 40494517
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||||||    
T  40494390 ctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca 40494489  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||||||||||||||||    
T  40494490 tgtaagatgttgtttgatttgtctcgac 40494517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 41263816 - 41263943
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||| ||| |||||| || |||||||||| |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  41263816 ctccatttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagca 41263915  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||||||||||||||||    
T  41263916 tgtaagatgttgtttgatttgtctcgac 41263943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 38957177 - 38957303
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||||||||||||||||| |||| ||||||||| | |||| ||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  38957177 tccgtttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcat 38957276  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  38957277 gtaagatgttgtttgatttgtctcgac 38957303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 4270349 - 4270221
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| |||||||||||||  ||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| |    
T  4270349 cctccgttttaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaac 4270250  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||| ||||| | ||||||||||||||    
T  4270249 atgtaatatgttgtgtgatttgtctcgac 4270221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 3100752 - 3100624
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||| | |||| ||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  3100752 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagc 3100653  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||||  |||||||||||||||    
T  3100652 atgtaagatgttgattgatttgtctcgac 3100624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 2766304 - 2766178
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| || |||||||||| |||| ||||||||| | |||||||| ||||| |||| ||||||||||||||||||||| |||||||||||    
T  2766304 ctccgtttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagca 2766205  T
Q  126 tgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||| |||||||||||||||    
T  2766204 tgtaagatgttgtttgatttgtctcga 2766178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 8394351 - 8394479
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||| ||||||| |||| ||||||||||| |||||||| ||||| || |||||||||||||||||||| ||||||||||||     
T  8394351 cctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaatattagt 8394450  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    || ||||||||| ||||||||||||||||    
T  8394451 atttaagatgttgtttgatttgtctcgac 8394479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 11637792 - 11637915
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||| || | || |||||||||| ||||||||||||| ||||||||||||    
T  11637792 gtttcaaaatgtatgtccaatttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgta 11637891  T
Q  130 agatgttctttgatttgtctcgac 153  Q
    ||||||| |||||||| |||||||    
T  11637892 agatgttgtttgatttatctcgac 11637915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 13216968 - 13216850
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| ||||| ||||||| |||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  13216968 aaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgaaagatg 13216869  T
Q  135 ttctttgatttgtctcgac 153  Q
    || ||||||||||||||||    
T  13216868 ttgtttgatttgtctcgac 13216850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 18090338 - 18090460
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttatttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    ||||||||| || ||||| ||||||| |||| ||||||||| || |||||||||||||||||||||||||||||| |||||||| |||| ||||||| ||    
T  18090338 cgttttaaattacatgtcgaattttttcaatgtgcactatttatatgacttatttgatcatattttttaactaatatataaatataaatgttagcatata 18090437  T
Q  130 agatgttctttgatttgtctcga 152  Q
    ||||||| || ||||||||||||    
T  18090438 agatgttgttcgatttgtctcga 18090460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 35403523 - 35403649
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||||| ||||| || ||||| |||| ||||||||||||||||||||||| |||||| |||    
T  35403523 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaatacagatattaacat 35403622  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||| ||||||||||||    
T  35403623 gtaagatgttgtttaatttgtctcgac 35403649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 5878322 - 5878446
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||  ||||| ||||||| ||||| |||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  5878322 cctccgtttccaaatacatgtcca-tttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagc 5878420  T
Q  125 atgtaagatgttctttgatttgtctc 150  Q
    ||||||||| |  |||||||||||||    
T  5878421 atgtaagatatcgtttgatttgtctc 5878446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 36642116 - 36641987
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcat-attttttaactaatgtataaatacaaatattag 123  Q
    ||||||||| |||||| |||| |||||||| |||| ||||||||||| |||||||| ||||| ||| | ||||||||| || ||||||||||||||||||    
T  36642116 cctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaatattag 36642017  T
Q  124 catgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||||| ||||||||||||||||    
T  36642016 catgtaagatgttgtttgatttgtctcgac 36641987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 22489529 - 22489402
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattag-ca 125  Q
    |||||||||||||  ||||| ||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||  |    
T  22489529 tccgttttaaaatgcatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtaa 22489430  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    || |||||||| ||||||||||||||||    
T  22489429 tgcaagatgttgtttgatttgtctcgac 22489402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 38497088 - 38497204
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttatttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| ||          |||||||||||||||||||||||||||||||    
T  38497088 cctccgttttaaaatatatgttcaatttttacaatgtgcactattcacttgacttactt----------tttaactaatgtataaatacaaatattagca 38497177  T
Q  126 tgtaagatgttctttgatttgtctcga 152  Q
    || |||||||| |||||||||| ||||    
T  38497178 tggaagatgttgtttgatttgtttcga 38497204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 36167081 - 36167182
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||||   |||||| |||| || |||||||| |||||||| |||||| ||| ||||| ||||||||||||||||||||||||||    
T  36167081 cctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaatattagc 36167180  T
Q  125 at 126  Q
    ||    
T  36167181 at 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 5173259 - 5173367
Alignment:
Q  29 ccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatg 127  Q
    ||||||||||||||| ||   | |||| |||| || ||||||||| ||| ||| |||||||||||| |||||||||| ||||||||||||||||| ||||    
T  5173259 ccgttttaaaatatacgttgcaattttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatg 5173358  T
Q  128 taagatgtt 136  Q
    |||||||||    
T  5173359 taagatgtt 5173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 40716715 - 40716655
Alignment:
Q  90 tattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  40716715 tattttttaactaatatataaatacaaattttagcatgtaagatgttgtttgatttgtctc 40716655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 24524107 - 24524202
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatatta 122  Q
    ||||||| |||||| |||| ||| |||| |||| ||||||||| | |||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  24524107 tccgtttcaaaatacatgttcaaattttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 33700331 - 33700205
Alignment:
Q  26 cctccgttttaaaatatatgtc-caatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattag 123  Q
    ||||||||| |||||| ||||| |||  ||||||||  ||||||||||  |  |||| ||||| ||||||||||||||||| ||||||||||||| ||||    
T  33700331 cctccgtttcaaaatacatgtcgcaaaatttacaatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaatgttag 33700232  T
Q  124 catgtaagatgttctttgatttgtctc 150  Q
     | |||||||||| |||||||||||||    
T  33700231 taagtaagatgttgtttgatttgtctc 33700205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 6414220 - 6414095
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||| |||||  |||||| |||| |||||||||||  ||||||| ||||| |||| ||||||| |||| ||||||| |||| ||| | ||    
T  6414220 tccgttttaaaataaatgtcacatttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaagattggtat 6414121  T
Q  127 gtaagatgttctttgatttgtctcga 152  Q
    |||| ||||| || ||||||||||||    
T  6414120 gtaaaatgttgttcgatttgtctcga 6414095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 18035163 - 18035232
Alignment:
Q  83 ttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||| |||| |||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  18035163 ttgaccataatttttaactaatatataaatgcaaatgttagcatgtaagatgttgtttgatttgtctcga 18035232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 9632222 - 9632287
Alignment:
Q  87 tcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||| |||||  ||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  9632222 tcatattttttcactaacatataaatactaatgttagcatgtaagatgttgtttgatttgtctcga 9632287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 40204953 - 40204852
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||| ||| ||||||||||||   ||||| ||||| |||||||||| |||||| ||||||||||||| |||||| ||||| |||| |||||||| ||||    
T  40204953 ttttaaaatgtgcactattcatccaacttactttgaacatattttttgactaatatataaatacaaatgttagcaggtaagttgttgtttgatttatctc 40204854  T
Q  151 ga 152  Q
    ||    
T  40204853 ga 40204852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 18020927 - 18021001
Alignment:
Q  81 atttgatcatattttttaactaatgtataaatacaaa---tattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||| ||||||||||||||||| || |||||||||   | |||||||||||||| || |||||||||||||||    
T  18020927 atttgaccatattttttaactaatatacaaatacaaaatgtgttagcatgtaagatattgtttgatttgtctcga 18021001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 32855638 - 32855594
Alignment:
Q  106 tataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||    
T  32855638 tataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 32855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 38958942 - 38958890
Alignment:
Q  101 taatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||||| ||||||||  |||||||||||| ||||||||||||||||    
T  38958942 taatgtataaataaaaatattaatatgtaagatgttgtttgatttgtctcgac 38958890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 3370456 - 3370385
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    ||||| |||||||||||| |||| ||||||||||||| |||  ||||||||| || |||||||||| |||||    
T  3370456 tttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgtttgatttgtttcgac 3370385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 21109857 - 21109818
Alignment:
Q  111 atacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  21109857 atacaaatgttagcatgtaagatgttgtttgatttgtctc 21109818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 24729917 - 24729971
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    |||||||||| |||| ||||||| ||| | || ||||||||||||||||||||||    
T  24729917 tttgatcataattttgaactaatatatgagtataaatattagcatgtaagatgtt 24729971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 7430896 - 7430965
Alignment:
Q  83 ttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||| ||||  | |||| |||||||||||||  |||||| ||||||||| | |||||||||||||    
T  7430896 ttgatcatagttttctattaatatataaatacaaatggtagcatataagatgttgtatgatttgtctcga 7430965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 8182012 - 8181959
Alignment:
Q  84 tgatcatattttttaactaatg-tataaatacaaatattagcatgtaagatgtt 136  Q
    |||||||||||||||| ||||  |||||||||||||||||  ||||||||||||    
T  8182012 tgatcatattttttaattaattatataaatacaaatattacaatgtaagatgtt 8181959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 13217276 - 13217223
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta 81  Q
    ||||||| |||||| ||||||||||||| |||| | ||||||||| ||||||||    
T  13217276 tccgtttcaaaatacatgtccaatttttgcaatgtacactattcacttgactta 13217223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 17610285 - 17610413
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  17610285 cctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaatattagc 17610384  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||| ||||||||||||    
T  17610385 atgtaagatgttgtttaatttgtctcgac 17610413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 12240430 - 12240307
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  12240430 gtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 12240331  T
Q  130 agatgttctttgatttgtctcgac 153  Q
    ||||||| ||||||||||||||||    
T  12240330 agatgttgtttgatttgtctcgac 12240307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 17446890 - 17446762
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||  ||||||||||||||||||||||||||||| |    
T  17446890 cctccattttaaaatatatgtccaatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatattaac 17446791  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  17446790 atgtaagatgttgtttgatttgtctcgac 17446762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 26125713 - 26125841
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| ||||||||  | |||||||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  26125713 cctccgtttcaaaatataaattcaatttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagc 26125812  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  26125813 atgtaagatgttgtttgatttgtctcgac 26125841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 26169991 - 26170119
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||| ||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  26169991 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattagc 26170090  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  26170091 atgtaagatgttgtttgatttgtctcgac 26170119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 35381151 - 35381023
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  35381151 cctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagc 35381052  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| |||||| ||| |||||    
T  35381051 atgtaagatgttgtttgatctgtttcgac 35381023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 47386543 - 47386415
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||| |||||  ||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  47386543 cctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagc 47386444  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  47386443 atgtaagatgttgtttgatttgtctcgac 47386415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 12625260 - 12625383
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| |||| |||||||| ||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  12625260 cgtttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 12625359  T
Q  129 aagatgttctttgatttgtctcga 152  Q
    |||||||| |||||||||||||||    
T  12625360 aagatgttgtttgatttgtctcga 12625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 2760984 - 2760859
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  2760984 cctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagc 2760885  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||   ||||||||||||||||    
T  2760884 atgtaagatg---tttgatttgtctcgac 2760859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 29830348 - 29830476
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||||||||  ||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  29830348 cctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 29830447  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  29830448 atgtaagatgttgtttgatttgtctcgac 29830476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 38416907 - 38416779
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  38416907 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 38416808  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| |||||||||| |||||    
T  38416807 atgtaagatgttgtttgatttgtgtcgac 38416779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 50620937 - 50620813
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||||||||||||||||  |||||||||||||||| || ||||| ||||| ||||  ||||||||||||||||||||| |||||||||||    
T  50620937 tccgttttaaaatatatgtccaattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcat 50620838  T
Q  127 gtaagatgttctttgatttgtctcg 151  Q
    |||||||||| ||||||||||||||    
T  50620837 gtaagatgttttttgatttgtctcg 50620813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 55209831 - 55209703
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||| ||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  55209831 cctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaatattagc 55209732  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  55209731 atgtaagatgttgtttgatttgtctcgac 55209703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 25296836 - 25296709
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| || || ||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  25296836 ctccgtttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 25296737  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||||||||||||||||    
T  25296736 tgtaagatgttgtttgatttgtctcgac 25296709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 44232332 - 44232206
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| ||||| ||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||||    
T  44232332 tccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 44232233  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  44232232 gtaagatgttgtttgatttgtctcgac 44232206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 25918210 - 25918336
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||| |||| |||||| || | || |||||||| |||||||||||| ||||||||||||    
T  25918210 tccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcat 25918309  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  25918310 gtaagatgttgtttgatttgtctcgac 25918336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 43967730 - 43967856
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| |||| |||||||| |||| ||||||||| | |||||||| ||||| |||| |||||||||||| |||||||||||||||||||||    
T  43967730 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 43967829  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  43967830 gtaagatgttgtttgatttgtctcgac 43967856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 31010219 - 31010347
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||| |||| |||||| || ||||||||||  ||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||    
T  31010219 cctcggtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaatattagc 31010318  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||| || ||||||||||||||||    
T  31010319 atgtaagatattgtttgatttgtctcgac 31010347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 54330947 - 54330819
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||  ||||| ||||||||||||| |||| ||| ||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  54330947 cctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 54330848  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| |||||||| |||||||    
T  54330847 atgtaagatgttgtttgatttatctcgac 54330819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 55191829 - 55191957
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||| |||||  ||| ||||||| |||||| |||||||||||||||||    
T  55191829 cctccgtttcaaaatatatgttcaatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagc 55191928  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    ||| || ||||| ||||||||||||||||    
T  55191929 atgcaaaatgttgtttgatttgtctcgac 55191957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 45291862 - 45291965
Alignment:
Q  51 tttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||| |||| ||||||||||| |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtct 45291961  T
Q  150 cgac 153  Q
    ||||    
T  45291962 cgac 45291965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 38716892 - 38717022
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||| |||| |||||| ||||||||||||| |||| ||||||||| ||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  38716892 cctctgtttcaaaatacatgtccaatttttgcaatgtgcactattaatt-gacttactttgaccatactttttaactaatgtataaatacaaatattagc 38716990  T
Q  125 atgtaaga---tgttctttgatttgtctcgac 153  Q
    ||||||||   |||| ||||||||||||||||    
T  38716991 atgtaagatgttgttgtttgatttgtctcgac 38717022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 35686378 - 35686489
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||| |||| |||||| ||||||||||||| |||| ||||||||||| || ||||| ||||| |||| |||||||||||||||||||||||||||||| |    
T  35686378 cctcagtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaatattatc 35686477  T
Q  125 atgtaagatgtt 136  Q
    ||||||||||||    
T  35686478 atgtaagatgtt 35686489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 19433619 - 19433488
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatat----tttttaactaatgtataaatacaaatat 120  Q
    |||| |||| |||||| |||| |||||||| |||| |||||| |||| |||||||| ||||| |||||    |||||||||| |||||||||||||||||    
T  19433619 cctctgtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaatacaaatat 19433520  T
Q  121 tagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||||||| |||||||||||||||    
T  19433519 tagcatgtaagatgttgtttgatttgtctcga 19433488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 19595732 - 19595832
Alignment:
Q  48 caatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttg 146  Q
    ||||||||||||||||||||||||| |||||||| ||| | |||| | |||||||||||||||||||||||||||||||||||| || || |||||||||    
T  19595732 caatttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgtttgatttg 19595831  T
Q  147 t 147  Q
    |    
T  19595832 t 19595832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 50205752 - 50205876
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| ||||| | |||||  ||| |||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||  ||    
T  50205752 cgtttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagctcgt 50205851  T
Q  129 aagatgttctttgatttgtctcgac 153  Q
    |||||||| |||||||| |||||||    
T  50205852 aagatgttgtttgatttatctcgac 50205876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 9029707 - 9029578
Alignment:
Q  28 tccgttttaaaatatatgtccaatt---tttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattag 123  Q
    |||||||||||||| ||||||||||   ||| |||| || |||||| | || ||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  9029707 tccgttttaaaatacatgtccaattaattttgcaatctgtactatttacttaacttactttgaccatactttttaactaatgtataaatacaaatattag 9029608  T
Q  124 catgtaagatgttctttgatttgtctcgac 153  Q
    || ||||||| || ||||||||||||||||    
T  9029607 cacgtaagatattgtttgatttgtctcgac 9029578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 4467708 - 4467648
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4467708 tttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctcgac 4467648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 55800839 - 55800941
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| || ||| || | |||||||| |||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  55800839 cctccgtttcaatatacatcttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 55800938  T
Q  125 atg 127  Q
    |||    
T  55800939 atg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 34316526 - 34316637
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||| |||||||||||||||  ||||||||| | ||||||||| || ||||||| |||||||||||| || ||||||| ||||||||||||| |||||    
T  34316526 cctccgatttaaaatatatgtcgtatttttacagtgtgcactatttatatgacttactttgatcatattgtt-aactaatatataaatacaaatgttagc 34316624  T
Q  125 atgtaagatgttc 137  Q
    || ||||||||||    
T  34316625 atataagatgttc 34316637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 3036985 - 3037112
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||| |||| |||||| |||||  | || |||||| || ||||||||  ||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  3036985 cctctgtttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattagc 3037084  T
Q  125 atgtaagatgttctttgatttgtctcga 152  Q
    |||||| || || |||||||||||||||    
T  3037085 atgtaaaatattatttgatttgtctcga 3037112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 38721342 - 38721453
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| |||||||||| |||||  |||||| |||| || | ||||||  |||||||||| |||||||||||||||| ||| ||||||||||||| |||||    
T  38721342 cctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatgttagc 38721441  T
Q  125 atgtaagatgtt 136  Q
    ||||||||||||    
T  38721442 atgtaagatgtt 38721453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 54610868 - 54610979
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcact-attcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||| |||||||||||  ||||||| |||| | |||| ||||| |||||||| ||| |||||||||||||| ||||||||||||||| |||||||     
T  54610868 ctccgtttcaaaatatatgtttaatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaatacagatattagt 54610967  T
Q  125 atgtaagatgtt 136  Q
    ||||||||||||    
T  54610968 atgtaagatgtt 54610979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 36523223 - 36523105
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| ||||||||||||  |||||| |||||||||||||| |  ||||||| |||||  ||| |||||||||||| ||||||||||||| ||| |||    
T  36523223 tccgtttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatgttaacat 36523124  T
Q  127 gtaagatgttctttgattt 145  Q
    |||||||||| || |||||    
T  36523123 gtaagatgttgttcgattt 36523105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 7614622 - 7614739
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| |||||  | |||||||||||  | || |||  |||||||||| || ||||||||||||||||| ||||||||||||| |||||||    
T  7614622 tccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaatgttagcat 7614721  T
Q  127 gtaagatgttctttgatt 144  Q
    |||||||||| |||||||    
T  7614722 gtaagatgttgtttgatt 7614739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 14144657 - 14144589
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||| || |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  14144657 tttgaccacattttttaactaatatataaatacaaatattagtatgtaagatgttgtttgatttgtctc 14144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 50181126 - 50181190
Alignment:
Q  86 atcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| || || ||||||||||    
T  50181126 atcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctc 50181190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 55091383 - 55091317
Alignment:
Q  86 atcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||||| |||| ||||||||||||| |||| |||||||||||| |||||||||||||||    
T  55091383 atcatattttttaattaatatataaatacaaatgttagtatgtaagatgttgtttgatttgtctcga 55091317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 2571129 - 2571014
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| |||||  ||||||| ||| |||| ||||||  ||| |||||| ||  |||||||||||||||| ||||||||||||| ||||||||||||||     
T  2571129 aaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaagata 2571030  T
Q  135 ttctttgatttgtctc 150  Q
    |  |||||||||||||    
T  2571029 taatttgatttgtctc 2571014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 32871584 - 32871489
Alignment:
Q  58 aatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||| ||||||| ||||||| ||| |||||||||||||||||||| | ||||||||||| | || ||||| |||||| |||||||||| ||||    
T  32871584 aatatgctctattcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgtttgatttgtttcga 32871489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 39307703 - 39307826
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| |||||  |||||| |||||| | |||||||  ||||||| ||||||  || |||||||||||| ||||||||||||| |||| ||    
T  39307703 tccgtttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatgttagtat 39307802  T
Q  127 gtaagatgttctttgatttgtctc 150  Q
    |||| ||||| ||| |||||||||    
T  39307803 gtaaaatgttgtttaatttgtctc 39307826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 37767215 - 37767087
Alignment:
Q  26 cctccgttttaaaatatatgtc-caatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattag 123  Q
    |||||||||||||||  ||||| ||||||| | ||||||||||||| |  ||||||| |||||  ||| ||||||||  || ||||||||||||| ||||    
T  37767215 cctccgttttaaaatgaatgtcgcaattttga-aatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaaatgttag 37767117  T
Q  124 catgtaagatgttctttgatttgtctcgac 153  Q
     ||||||||| || ||||||||||||||||    
T  37767116 aatgtaagatattgtttgatttgtctcgac 37767087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 20875478 - 20875379
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||| ||| |||||||||||| | | ||| ||||| ||||||||||||||||| |||||||  |||| || |||| ||||||||| |||||||||||||    
T  20875478 ttttaaaatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatgtttgcatataagatgttgtttgatttgtctc 20875379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 19903850 - 19903780
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||| ||||| ||||||||||| ||||||||||||| ||||||||| |||| || |||||||||| ||||    
T  19903850 tttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgtttgatttgtttcga 19903780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 27407808 - 27407747
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagca--tgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||| ||||| |||||||||    
T  27407808 tttttaactaatatataaatacaaatattagcatgtgtaagatgttgtttgagttgtctcga 27407747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 29051691 - 29051793
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||| ||||   | ||||||||||| || ||||||  | ||||| ||||| ||||||||||||||||| |||||||||||  ||||||||    
T  29051691 tccgttttaaaatacatgttgcaattttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaa--attagcat 29051788  T
Q  127 gtaag 131  Q
    |||||    
T  29051789 gtaag 29051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 10550429 - 10550555
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatatttt--ttaactaatgtataaatacaaatatta 122  Q
    |||| |||||||||||| |||   | |||||||||||||||||||||  ||  ||| ||| | ||||||||  ||||||||| |||||||| |||| |||    
T  10550429 cctctgttttaaaatatctgttgcaattttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaaaatgtta 10550528  T
Q  123 gcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||   |||||||||||||||    
T  10550529 gcatgtaagatg---tttgatttgtctcga 10550555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 30446370 - 30446430
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    ||||| |||||| ||||||||||||| ||||| ||||| ||||| ||||||||||||||||    
T  30446370 tttttgactaatatataaatacaaatgttagcctgtaaaatgttgtttgatttgtctcgac 30446430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 56297902 - 56297834
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||| ||||||| ||||||||| ||||||||||||| ||||||| ||| ||||| | |||||||||||    
T  56297902 tttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgttgtctgatttgtctc 56297834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 27344138 - 27344083
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgt 147  Q
    ||||||||||||| |||||||| |||||||| ||| ||||||||| ||||||||||    
T  27344138 ttttttaactaatatataaataaaaatattaacatataagatgttgtttgatttgt 27344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 34323143 - 34323198
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgt 147  Q
    |||||||||||||||||| | ||||||||||  |||||||||||| ||||||||||    
T  34323143 ttttttaactaatgtatacacacaaatattaatatgtaagatgttgtttgatttgt 34323198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 53304487 - 53304535
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaa 130  Q
    ||||||||||||||| ||||||| || ||||| ||||||||||||||||    
T  53304487 tttgatcatatttttaaactaatatacaaatataaatattagcatgtaa 53304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 29586075 - 29585977
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||| ||||| |||||||||  | ||||| ||||| |||||||||||| |||| | ||||||||||| ||| ||||||| ||||| |||||||| ||||    
T  29586075 ttttataatatacactattcacataacttactttga-catattttttaattaatatgtaaatacaaatgttaacatgtaaaatgttttttgatttatctc 29585977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 43968232 - 43968295
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgattt 145  Q
    ||||||| ||||||||||||||| ||||||| ||||||||| ||| ||  ||||| ||||||||    
T  43968232 tttgatcgtattttttaactaatatataaatgcaaatattatcatatacaatgttatttgattt 43968295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 23360193 - 23360291
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| |||||  |||||| |||||||||||||||||  |||||| ||||| | ||||||||||||||| ||| ||||||||| || ||| ||| ||||    
T  23360193 aaaatacatgtcgcatttttgcaatatgcactattcat--gacttactttgacc-tattttttaactaatatatgaatacaaatgttggcaagtatgatg 23360289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 136
Target Start/End: Complemental strand, 34652192 - 34652162
Alignment:
Q  106 tataaatacaaatattagcatgtaagatgtt 136  Q
    |||||||||||||||||||||||||||||||    
T  34652192 tataaatacaaatattagcatgtaagatgtt 34652162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 51456543 - 51456506
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaa 130  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  51456543 tttttaactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 22054778 - 22054905
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  22054778 ctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 22054877  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||||||||||||||||    
T  22054878 tgtaagatgttgtttgatttgtctcgac 22054905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 18668945 - 18668817
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  18668945 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaaatattagc 18668846  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  18668845 atgtaagatgttgtttgatttgtctcgac 18668817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 32414936 - 32414808
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  32414936 cctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 32414837  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  32414836 atgtaagatgttgtttgatttgtctcgac 32414808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 4147936 - 4148064
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| |||| |||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  4147936 cctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 4148035  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||| ||||||    
T  4148036 atgtaagatgttgtttgatttgcctcgac 4148064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 19088215 - 19088087
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| || | |||||||||||| |||||||||||||||||||    
T  19088215 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatattagc 19088116  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  19088115 atgtaagatgttgtttgatttgtctcgac 19088087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 32671821 - 32671949
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| || ||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  32671821 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagc 32671920  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
     ||||||||||| ||||||||||||||||    
T  32671921 gtgtaagatgttgtttgatttgtctcgac 32671949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 20226550 - 20226427
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| |||||| |||| |||||||| |||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  20226550 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 20226451  T
Q  130 agatgttctttgatttgtctcgac 153  Q
    ||| ||| ||||||||||||||||    
T  20226450 agacgttgtttgatttgtctcgac 20226427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 22120534 - 22120411
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| |||||| |||| |||||||| |||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  22120534 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 22120435  T
Q  130 agatgttctttgatttgtctcgac 153  Q
    ||| ||| ||||||||||||||||    
T  22120434 agacgttgtttgatttgtctcgac 22120411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 24624198 - 24624072
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||| |||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  24624198 cctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 24624099  T
Q  125 atgtaagatgttctttgatttgtctcg 151  Q
    |||||||||||| ||||||||||||||    
T  24624098 atgtaagatgttgtttgatttgtctcg 24624072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 6563231 - 6563359
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||| |||||||| |||| ||||||||| | |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  6563231 cctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 6563330  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  6563331 atgtaagatgttgtttgatttgtctcgac 6563359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 15383185 - 15383059
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| ||||||||||||| |||| |||| ||||||||||||||| ||| | |||| |||||||||||| |||||||||||||||||||||    
T  15383185 tccgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcat 15383086  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| |||||||| |||||||    
T  15383085 gtaagatgttgtttgatttttctcgac 15383059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 17214041 - 17213916
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| ||| |||||| ||||| ||||||| |||| |||||||||||||||||||| |||||  ||| |||||||||||| |||||||||||||||||||    
T  17214041 cctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaatattagc 17213942  T
Q  125 atgtaagatgttctttgatttgtctc 150  Q
    |||||||||||| |||||||||||||    
T  17213941 atgtaagatgttgtttgatttgtctc 17213916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 20437269 - 20437142
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatatttttt-aactaatgtataaatacaaatattagca 125  Q
    |||||||| ||||| ||||| ||||||| |||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| | ||    
T  20437269 tccgttttcaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaatatcaaca 20437170  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||||||||| ||||||    
T  20437169 tgtaagatgttgtttgatttgcctcgac 20437142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 3989510 - 3989393
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||||| ||||||||| |||||||||||||||||    
T  3989510 aaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcatgtaagatg 3989412  T
Q  135 ttctttgatttgtctcgac 153  Q
    || ||||||||||||||||    
T  3989411 ttgtttgatttgtctcgac 3989393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 153
Target Start/End: Complemental strand, 24955630 - 24955525
Alignment:
Q  49 aatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgt 147  Q
    |||||||  ||| |||| |||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  24955630 aatttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgtaagatgttgtttgatttgt 24955531  T
Q  148 ctcgac 153  Q
    ||||||    
T  24955530 ctcgac 24955525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 17257903 - 17257784
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| |||||| ||||| ||||||| |||| |||| |||||| |||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  17257903 gtttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaatattagcatgta 17257804  T
Q  130 agatgttctttgatttgtct 149  Q
    ||||||| ||||||||||||    
T  17257803 agatgttgtttgatttgtct 17257784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 1040854 - 1040957
Alignment:
Q  51 tttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||| |||| ||||||||||| |||| ||| ||||| |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtct 1040953  T
Q  150 cgac 153  Q
    ||||    
T  1040954 cgac 1040957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 25476065 - 25475942
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| |||| |||||| |||||||| ||||| | || |||||||||||||||||||||     ||||||    
T  25476065 cctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata-----attagc 25475971  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  25475970 atgtaagatgttgtttgatttgtctcgac 25475942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 21540876 - 21540758
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| ||||  |||||||||||| |||||||||||||||||||| ||||| |||| |||| ||||| | |||||||||||||||||  |||||| |||    
T  21540876 aaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatattataatgtaaaatg 21540777  T
Q  135 ttctttgatttgtctcgac 153  Q
    || ||||||||||||||||    
T  21540776 ttatttgatttgtctcgac 21540758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 12226020 - 12226107
Alignment:
Q  66 ctattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||| | ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  12226020 ctattcactggacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaagatattgtttgatttgtctcga 12226107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 10520475 - 10520600
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| |||| |||||||| |||| || | ||||||||||||||| ||||| ||||  | |||||||||||||||||||| ||||||  ||    
T  10520475 tccgtttcaaaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaatacagatattaatat 10520574  T
Q  127 gtaagatgttctttgatttgtctcga 152  Q
    |||| ||||| |||||||||||||||    
T  10520575 gtaaaatgttgtttgatttgtctcga 10520600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 15337519 - 15337604
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    |||||||||||||| ||||||  | ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  15337519 ttttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaaaatgtt 15337604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 31569280 - 31569175
Alignment:
Q  29 ccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatg 127  Q
    |||||| |||||| ||||||||||||| |||| |||| |||||| |||||||| |||||  ||| ||||| | ||||||||||||||||||||||| |||    
T  31569280 ccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatg 31569181  T
Q  128 taagat 133  Q
    ||||||    
T  31569180 taagat 31569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 3623963 - 3623856
Alignment:
Q  29 ccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatg 127  Q
    |||||||||||||||||||  | ||||||||||| || ||||||| |   ||| ||||| |||| |||||||||||| ||||||||||||| ||||||||    
T  3623963 ccgttttaaaatatatgtcgcagttttacaatatacattattcatatagtttactttgaccata-tttttaactaatatataaatacaaatgttagcatg 3623865  T
Q  128 taagatgtt 136  Q
    |||||||||    
T  3623864 taagatgtt 3623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 23158109 - 23158041
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||| || |||||||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||    
T  23158109 tttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 23158041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 5495311 - 5495374
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgattt 145  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||| || ||||||||    
T  5495311 tttgatcatgttttttaactaatatataaatacaaatgttagcatgtaagattttgtttgattt 5495374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 8101668 - 8101727
Alignment:
Q  88 catattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgt 147  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||    
T  8101668 catattttttaactaatatataaatacaaatgttaacatgtaagatgttatttgatttgt 8101727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 10298774 - 10298703
Alignment:
Q  81 atttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||| |||||||||| |||||| ||||||||||||| ||||||||||| ||||| |||||||| ||||||    
T  10298774 atttgaccatattttttcactaatatataaatacaaatgttagcatgtaaaatgttttttgatttttctcga 10298703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 28477815 - 28477878
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgattt 145  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  28477815 tttgaccataatttttaactaatatataaatacaaatattagcatgtaagttgttgtttgattt 28477878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 4440856 - 4440982
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||||||||   ||||||  ||| |||||||||||| | ||||| ||||| |||| ||||||  |||  ||||||||||||| ||||||    
T  4440856 ctccgtttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgttagca 4440955  T
Q  126 tgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||| || ||||||| ||||    
T  4440956 tgtaagatgttgttcgatttgtttcga 4440982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 29790274 - 29790331
Alignment:
Q  88 catattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgattt 145  Q
    |||| |||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  29790274 cataatttttaactaatatataaatacaaatattagcatgtaagttgttgtttgattt 29790331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 29693945 - 29694015
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||| |||| |||||||||||| |||||||||||||| ||||||||||| ||||  ||||||||| ||||    
T  29693945 tttgaccataatttttaactaatatataaatacaaatactagcatgtaagttgttgcttgatttgtatcga 29694015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 31869770 - 31869824
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  31869770 tttgaccattttttttaactaatatataaatacaaatgttagcatgtaagatgtt 31869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 2360063 - 2360119
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||| ||||||||||||    
T  2360063 tttttaactaatatataaataaaaatgttagcatgtaaaatgttgtttgatttgtct 2360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 16193053 - 16193014
Alignment:
Q  111 atacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  16193053 atacaaatattagcatgtaagatgttgtttgatttgtctc 16193014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 19240792 - 19240741
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagat 133  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||| |||||||    
T  19240792 tttgaccatattttttaactaatatataaatacaaatatttgcaagtaagat 19240741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 1260492 - 1260543
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagat 133  Q
    ||||| ||||||||||||||||| ||||||||||| | |||||| |||||||    
T  1260492 tttgaccatattttttaactaatatataaatacaattgttagcacgtaagat 1260543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 17155158 - 17155265
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| |||||   |||||| ||| | |||||||||  |||| || |||||||||| ||  |||||||  ||||||||||||| |||||||||    
T  17155158 cgtttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgt 17155257  T
Q  129 aagatgtt 136  Q
    ||||||||    
T  17155258 aagatgtt 17155265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 14214166 - 14214065
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    |||||||||||| |||||  | ||||| ||| |||| |||||||  ||||| ||| || | ||||||||||| ||| |||||||| |||| |||||||||    
T  14214166 cgttttaaaatacatgtcgcaattttataatgtgcattattcatccgacttgttttgaccgtattttttaaccaatatataaatataaatgttagcatgt 14214067  T
Q  129 aa 130  Q
    ||    
T  14214066 aa 14214065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 39866398 - 39866270
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  39866398 cctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 39866299  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  39866298 atgtaagatgttgtttgatttgtctcgac 39866270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 13499592 - 13499464
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  13499592 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 13499493  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  13499492 atgtaagatgttgtttgatttgtctcgac 13499464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 42490453 - 42490325
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  42490453 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 42490354  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  42490353 atgtaagatgttgtttgatttgtctcgac 42490325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 42761740 - 42761612
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  42761740 cctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 42761641  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| |||||||||| |||||    
T  42761640 atgtaagatgttgtttgatttgtttcgac 42761612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 21797562 - 21797689
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| ||||||||||||| |||| ||||||||||| |||| |||||| || |||| |||||||||||||||||||||||||||||||||    
T  21797562 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagca 21797661  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||||||||||||||||    
T  21797662 tgtaagatgttgtttgatttgtctcgac 21797689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 20765201 - 20765329
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||| |||||  ||| |||||||||||| ||||||||||||||||| |    
T  20765201 cctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattaac 20765300  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  20765301 atgtaagatgttgtttgatttgtctcgac 20765329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 27010731 - 27010603
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| || | |||||||||||| |||||||||||||||||||    
T  27010731 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatattagc 27010632  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  27010631 atgtaagatgttgtttgatttgtctcgac 27010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 36227550 - 36227678
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||  |||| |||||||| ||||  ||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||    
T  36227550 cctccgttttaaaatgcatgttcaatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaatattagc 36227649  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  36227650 atgtaagatgttgtttgatttgtctcgac 36227678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 54507644 - 54507766
Alignment:
Q  24 ttcctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatatta 122  Q
    ||||||||||| |||||| || |||||||||| |||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||| ||||||    
T  54507644 ttcctccgtttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagatatta 54507743  T
Q  123 gcatgtaagatgttctttgattt 145  Q
    |||||||||||||| ||||||||    
T  54507744 gcatgtaagatgttgtttgattt 54507766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 27334986 - 27334861
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| |||| |||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||||    
T  27334986 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 27334887  T
Q  127 gtaagatgttctttgatttgtctcga 152  Q
    |||||||||| |||||||||||||||    
T  27334886 gtaagatgttgtttgatttgtctcga 27334861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 6910342 - 6910466
Alignment:
Q  29 ccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatg 127  Q
    |||||| |||||| |||||||| ||||||||| | ||||||||| |||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||    
T  6910342 ccgtttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatg 6910441  T
Q  128 taagatgttctttgatttgtctcga 152  Q
    ||||||||| |||||||||||||||    
T  6910442 taagatgttgtttgatttgtctcga 6910466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 33415804 - 33415932
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||| |||| |||||| ||||||||||||| |||| |||  |||| |||||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  33415804 cctctgtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaatattagc 33415903  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  33415904 atgtaagatgttgtttgatttgtctcgac 33415932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 38137830 - 38137954
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagca 125  Q
    ||||||||| |||||||||| |  ||||| |||| ||||||||||  |||| |||||| || ||||||||||||||||||||||||||||||||||||||    
T  38137830 ctccgttttcaaatatatgttcggtttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagca 38137929  T
Q  126 tgtaagatgttctttgatttgtctc 150  Q
    ||||||||||| |||||||||||||    
T  38137930 tgtaagatgttgtttgatttgtctc 38137954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 30213842 - 30213937
Alignment:
Q  59 atatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||||| ||||||||||| || |||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30213842 atatgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctcgac 30213937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 34912399 - 34912288
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||     
T  34912399 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaga 34912300  T
Q  125 atgtaagatgtt 136  Q
     |||||||||||    
T  34912299 ttgtaagatgtt 34912288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 21005298 - 21005426
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||| |||||||| |||  ||||||||||| || ||||| ||||| |||| ||||||| |||| |||||||| ||||||||||    
T  21005298 cctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataaatattagc 21005397  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  21005398 atgtaagatgttgtttgatttgtctcgac 21005426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 33803536 - 33803651
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcata-ttttttaactaatgtataaatacaaatattagcatgtaagat 133  Q
    |||||| ||||| ||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||||||||||||| |||||||||| ||||||||    
T  33803536 aaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgtaagat 33803635  T
Q  134 gttctttgatttgtct 149  Q
    ||| ||||||||||||    
T  33803636 gttgtttgatttgtct 33803651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 43467998 - 43467871
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| ||| ||||||||| |||| || |||||||| |||||||| ||||| |||| ||||||||| |||||||||| | ||||||||||    
T  43467998 ctccgtttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaatattagca 43467899  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
     |||||||||| ||||||||||||||||    
T  43467898 ggtaagatgttgtttgatttgtctcgac 43467871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 19823905 - 19824028
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||      ||||||||||    
T  19823905 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtat------aaatattagc 19823998  T
Q  125 atgtaagatgttctttg-atttgtctcgac 153  Q
    |||||||||||| |||| ||||||||||||    
T  19823999 atgtaagatgttgtttgaatttgtctcgac 19824028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 43181611 - 43181484
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcata-ttttttaactaatgtataaatacaaatattagca 125  Q
    ||||||| |||||| ||||  ||||||   ||| ||||||||||| |||| ||| ||||| |||| |||||||||||||||||||||| ||||||||| |    
T  43181611 tccgtttaaaaatacatgtttaattttcgtaatgtgcactattcacttgatttactttgaccatacttttttaactaatgtataaatataaatattagta 43181512  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| ||| ||||||||||||    
T  43181511 tgtaagatgttgtttaatttgtctcgac 43181484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 15333058 - 15332936
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    ||||||||||| |||||  | ||||||||| |||||||||||  |  |||  ||||| || |||||||||||||| ||||||||||||| ||||||||||    
T  15333058 gttttaaaatacatgtcgcaattttacaatgtgcactattcacatagcttgctttgaccaaattttttaactaatatataaatacaaatgttagcatgta 15332959  T
Q  130 agatgttctttgatttgtctcga 152  Q
    ||||||| ||||||| |||||||    
T  15332958 agatgttgtttgattggtctcga 15332936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 41253015 - 41252896
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| ||||||||||||  | ||||||||| |||||||||||| |  |||| ||| | ||||||||||||||||| ||||||||||||| ||||||| ||    
T  41253015 gtttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgttagcatata 41252916  T
Q  130 agatgttctttgatttgtctcga 152  Q
    |||||   |||||||||||||||    
T  41252915 agatg---tttgatttgtctcga 41252896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 41751610 - 41751540
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| || |||||| |||||| ||||||||    
T  41751610 tttgatcatattttttaactaatatataaatacaaatgttagcatttacgatgttgtttgatatgtctcga 41751540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 48334710 - 48334651
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  48334710 ttttttaacta-tatataaatacaaatattagcatgtaagatgttgtttgatttgtctcga 48334651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 3430505 - 3430407
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||||||| ||||||||| || | ||||| ||||| ||||||||||||||||| ||| |||| |||||||||||||||| |||   |||||||||||||    
T  3430505 ttttacaatgtgcactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgtaaaatg---tttgatttgtctc 3430409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 15568136 - 15568065
Alignment:
Q  81 atttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||||||||||||||| ||||||||||||| ||| | |||||||| || ||| |||||||||||    
T  15568136 atttgatcatattttttaactaatatataaatacaaatgttaccgtgtaagatattgttttatttgtctcga 15568065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 52167271 - 52167339
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||| |||| ||||||| |||| |||||||||||||||||  |||||||||||| |||||||||||||    
T  52167271 tttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgtttgatttgtctc 52167339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 25527472 - 25527521
Alignment:
Q  88 catattttttaactaatgtataaatacaaatattagcatgtaagatgttc 137  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||||||    
T  25527472 catattttttaactgatatataaatacaaatattaacatgtaagatgttc 25527521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 44561820 - 44561916
Alignment:
Q  57 caatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||| |||||||||||  ||||||| ||||| |||| |||||||||||  ||||||||||||| ||  ||||||||||||| || ||||||| ||||    
T  44561820 caatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatgttgacatgtaagatgttgttcgatttgtttcga 44561916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 33128119 - 33128049
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||||||| ||||||||||||  ||||||| |||||||| |||||||||| || | |||||||| ||||    
T  33128119 tttgatcatactttttaactaatacataaatataaatattaacatgtaagatattgtctgatttgtttcga 33128049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 45613580 - 45613662
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtata 109  Q
    ||||||| |||||  ||||||||||||| |||| ||||||||| | |||||||| |||||  ||| |||||||||||||||||    
T  45613580 tccgtttcaaaattcatgtccaatttttgcaatgtgcactatttacttgacttactttgactatactttttaactaatgtata 45613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 41943283 - 41943344
Alignment:
Q  89 atattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||||| | ||||||||||| |||  || ||||||||| |||||||||||||    
T  41943283 atattttttaactaatatttaaatacaaatgttaatatataagatgttgtttgatttgtctc 41943344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 47164649 - 47164585
Alignment:
Q  86 atcatattttttaactaatgtat-aaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||||||||| ||| |||||||||| |||| ||||||||||   |||||||||||||||    
T  47164649 atcatattttttaactaatatataaaatacaaatgttagtatgtaagatg---tttgatttgtctcga 47164585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 15664146 - 15664094
Alignment:
Q  81 atttgatcatattttttaactaatgtataaatacaaatattagcatgtaagat 133  Q
    ||||||||||||||||||| |||| ||||||||||||| |||  |||||||||    
T  15664146 atttgatcatattttttaattaatatataaatacaaatgttactatgtaagat 15664094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 17643800 - 17643844
Alignment:
Q  89 atattttttaactaatgtataaatacaaatattagcatgtaagat 133  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||    
T  17643800 atattttttaactaatatgtaaatacaaatgttagcatgtaagat 17643844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 22786700 - 22786757
Alignment:
Q  90 tattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||||||||||||| ||||||  ||||| || |||||||||||||| ||||||||||||    
T  22786700 tattttttaactaatatataaa--caaatgtttgcatgtaagatgttgtttgatttgtct 22786757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 28690338 - 28690378
Alignment:
Q  113 acaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  28690338 acaaatattaacatgtaagatgttgtttgatttgtctcgac 28690378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 30057367 - 30057430
Alignment:
Q  88 catattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcg 151  Q
    ||||||||||||||||| ||||||  ||||| ||||||| ||||||| | || |||||||||||    
T  30057367 catattttttaactaatatataaaagcaaatgttagcatataagatgatgttcgatttgtctcg 30057430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 32220931 - 32220966
Alignment:
Q  118 tattagcatgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32220931 tattagcatgtaagatgttgtttgatttgtctcgac 32220966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 23940554 - 23940508
Alignment:
Q  90 tattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||||||||||||| |||||||| |||| ||| |||||||||||||    
T  23940554 tattttttaactaatatataaataaaaatgttaacatgtaagatgtt 23940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 3017853 - 3017902
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaag 131  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||||| ||||    
T  3017853 tttgaccatattttttaactattatataaatacaaatgttagcatataag 3017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 55264720 - 55264659
Alignment:
Q  75 tgacttatttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    |||||||||||  |||||||||||| |||  | || |||||||||||| |||||||||||||    
T  55264720 tgacttatttgtccatattttttaattaacatgtagatacaaatattaacatgtaagatgtt 55264659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 22782336 - 22782393
Alignment:
Q  90 tattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||||||||||||  ||||||  ||||| || |||||||||||||| ||||||||||||    
T  22782336 tattttttaactaaaatataaa--caaatgtttgcatgtaagatgttgtttgatttgtct 22782393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 23224346 - 23224306
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaaga 132  Q
    ||||||||||||| ||||||| |||||||||| ||||||||    
T  23224346 ttttttaactaatatataaatgcaaatattagaatgtaaga 23224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 27813481 - 27813445
Alignment:
Q  89 atattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  27813481 atattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 40772029 - 40771901
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||| |||| ||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  40772029 cctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattagc 40771930  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  40771929 atgtaagatgttgtttgatttgtctcgac 40771901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 6402667 - 6402539
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| ||||||||||| || |||| |||||||||||| |||||||||||||||||||    
T  6402667 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagc 6402568  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  6402567 atgtaagatgttgtttgatttgtctcgac 6402539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 11641324 - 11641196
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| ||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  11641324 cctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 11641225  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  11641224 atgtaagatgttgtttgatttgtctcgac 11641196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 16120697 - 16120573
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| |||| |||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  16120697 cctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 16120598  T
Q  125 atgtaagatgttctttgatttgtct 149  Q
    |||||||||||| ||||||||||||    
T  16120597 atgtaagatgttgtttgatttgtct 16120573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 17305959 - 17306087
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||| |||||  ||| ||||||| |||| |||||||||||||||||||    
T  17305959 cctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaatattagc 17306058  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  17306059 atgtaagatgttgtttgatttgtctcgac 17306087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 27292645 - 27292773
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||||||||||||||||| |||| ||||||||||| |||| ||| |||||  ||| ||||||||||| ||||||||||||||||||||    
T  27292645 cctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaaatattagc 27292744  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  27292745 atgtaagatgttatttgatttgtctcgac 27292773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 30701723 - 30701851
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||||||||||  ||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  30701723 cctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatattagc 30701822  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
     ||||||||||| ||||||||||||||||    
T  30701823 gtgtaagatgttgtttgatttgtctcgac 30701851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 42788799 - 42788671
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| ||| ||||||||||||||||||||  ||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||| ||    
T  42788799 cctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatttgc 42788700  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  42788699 atgtaagatgttgtttgatttgtctcgac 42788671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 9342900 - 9342774
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||| | ||||| ||||||| |||| |||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9342900 tccgtttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcat 9342801  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  9342800 gtaagatgttgtttgatttgtctcgac 9342774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 30003540 - 30003662
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| |||||||||||||  ||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  30003540 tccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 30003639  T
Q  127 gtaagatgttctttgatttgtct 149  Q
    |||||||||| ||||||||||||    
T  30003640 gtaagatgttgtttgatttgtct 30003662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 36399105 - 36399231
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||||| || ||||| ||||| |||| |||||||||||||||||||||||||||||||| |    
T  36399105 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgt 36399204  T
Q  127 gtaagatgttctttgatttgtctcgac 153  Q
    |||||||||| ||||||||||||||||    
T  36399205 gtaagatgttgtttgatttgtctcgac 36399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 36757733 - 36757615
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  36757733 aaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 36757634  T
Q  135 ttctttgatttgtctcgac 153  Q
    || ||||||||||||||||    
T  36757633 ttgtttgatttgtctcgac 36757615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 24321264 - 24321394
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatat--tttttaactaatgtataaatacaaatatta 122  Q
    |||||||||||||||| ||||| ||||||| |||| ||||||||||| |||| ||| ||||| |||||  ||||||||||||||||||||||||||||||    
T  24321264 cctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaatacaaatatta 24321363  T
Q  123 gcatgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| || ||||||||||||||||    
T  24321364 gcatgtaagatattgtttgatttgtctcgac 24321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 40977745 - 40977621
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||  |||||| ||||||||||||| |||| || |||||||| |||||| | ||||| |||| ||||||||||||||||||||||||||||||||    
T  40977745 cctccgttgcaaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagc 40977646  T
Q  125 atgtaagatgttctttgatttgtct 149  Q
    |||||||||||| ||||||||||||    
T  40977645 atgtaagatgttgtttgatttgtct 40977621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 52024031 - 52024159
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||| |||||||| |||| ||||||||||| || ||||| ||||| |||| ||||||||||||||||||||| ||||||||||    
T  52024031 cctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaatattagc 52024130  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
     ||||||||||| ||||||||||||||||    
T  52024131 gtgtaagatgttgtttgatttgtctcgac 52024159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 6766377 - 6766502
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||| |||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  6766377 cctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 6766476  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||   ||||||||||||||||    
T  6766477 atgtaagatg---tttgatttgtctcgac 6766502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 15912583 - 15912466
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||| ||||| |||| ||||| | | || | |||||||||||||||||||||||||||    
T  15912583 aaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaagatg 15912484  T
Q  135 ttctttgatttgtctcga 152  Q
    || |||||||||||||||    
T  15912483 ttgtttgatttgtctcga 15912466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 42735423 - 42735294
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcata---ttttttaactaatgtataaatacaaatattag 123  Q
    ||||||| |||||| |||| ||||| || |||| ||||||||||| |||||||| ||||| ||||   ||||||||||||| ||||||||||||||||||    
T  42735423 tccgtttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaatattag 42735324  T
Q  124 catgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||| | ||||||||||||||||    
T  42735323 catgtaagatgatgtttgatttgtctcgac 42735294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 3485459 - 3485337
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    ||||||||||| |||||  | ||||||||||||||||||||   | ||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  3485459 gttttaaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgta 3485360  T
Q  130 agatgttctttgatttgtctcga 152  Q
    || |||| |||||||||||||||    
T  3485359 aggtgttgtttgatttgtctcga 3485337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 26910081 - 26910205
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| |||||||||| ||||  ||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||| |    
T  26910081 cctccattttaaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaac 26910180  T
Q  125 atgtaagatgttctttgatttgtct 149  Q
    ||| |||||| | ||| ||||||||    
T  26910181 atgcaagatgatgtttaatttgtct 26910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 42367513 - 42367425
Alignment:
Q  66 ctattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  42367513 ctattcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacatgtaagatgttatttgatttgtctcgac 42367425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 4302124 - 4302234
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||||| |||| |||| |||||||| |||| | ||||||| | |||||||| |||||| || |||||||||||||||||||||| |||||||||||    
T  4302124 ctccgttttataatacatgttcaatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaatattagca 4302223  T
Q  126 tgtaagatgtt 136  Q
    |||||||||||    
T  4302224 tgtaagatgtt 4302234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 48375018 - 48375127
Alignment:
Q  37 aaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatgt 135  Q
    |||||||||| |||||||| |||| | || |||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||  |    
T  48375018 aaatatatgttcaatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaagacat 48375117  T
Q  136 tctttgattt 145  Q
    | ||||||||    
T  48375118 tgtttgattt 48375127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 44647970 - 44647859
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| |||||||||| |||||  |||||| |||| || | ||||||  |||||||||| |||||||||||||||| ||| ||||||||||||| |||||    
T  44647970 cctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatgttagc 44647871  T
Q  125 atgtaagatgtt 136  Q
    ||||||||||||    
T  44647870 atgtaagatgtt 44647859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 22575783 - 22575724
Alignment:
Q  86 atcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgattt 145  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  22575783 atcatattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgattt 22575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 40800643 - 40800517
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatatttttt-aactaatgtataaatacaaatattagc 124  Q
    |||| ||| ||||||||||||  | ||||||||| |||| || |||  | ||||| ||||| |||||||||| ||||||| ||||| ||||||| |||||    
T  40800643 ctccatttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatataa-tacaaatgttagc 40800545  T
Q  125 atgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||| |||||||||||||||    
T  40800544 atgtaagatgttgtttgatttgtctcga 40800517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 15382682 - 15382556
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttatt-tgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| |||||  | ||||||||| | |||||||||  | ||||| | ||| ||  |||||||| |||| |||||||||||||||||| |    
T  15382682 ctccgtttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagta 15382583  T
Q  126 tgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||| |||||||||| ||||    
T  15382582 tgtaagatgttgtttgatttgtttcga 15382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 44644612 - 44644510
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| |||||||||| |||||  |||||| |||| || | ||||||  ||||||| ||||||||||||||||||| ||| ||||||||||||| |||||    
T  44644612 cctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaatgttagc 44644513  T
Q  125 atg 127  Q
    |||    
T  44644512 atg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 38153524 - 38153407
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgacttatt-tgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||| |||||  ||||||| ||| |||||||||||  ||||||| | | | |||| |||||||||||  ||||||||||||| ||| |||||||||||    
T  38153524 aaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgtaagatg 38153425  T
Q  135 ttctttgatttgtctcga 152  Q
    ||||| ||||||| ||||    
T  38153424 ttcttcgatttgtttcga 38153407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 14777094 - 14777157
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgattt 145  Q
    ||||||||||||||||||||  | |||||||||||||||||  |||||||||||| ||||||||    
T  14777094 tttgatcatattttttaactgttatataaatacaaatattaatatgtaagatgttgtttgattt 14777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 25171240 - 25171287
Alignment:
Q  106 tataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgtttgatttgtttcgac 25171287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 31444986 - 31445053
Alignment:
Q  83 ttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||| ||||||||||||||||| |||||| |||||| || |||||||||||||| ||| |||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgtttaatttgtctc 31445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 30385345 - 30385291
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  30385345 tttgaccatattttttaactaatatataaatacaaatgttagtatgtaagatgtt 30385291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 16689855 - 16689951
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||| || |||||||||||  | ||||| |||||||||||||| |||||||| ||||||||||   ||| |||||||| ||||| |||||||||||||    
T  16689855 ttttacgatgtgcactattcacataacttactttgatcatattttctaactaatatataaataca---attcgcatgtaatatgttgtttgatttgtctc 16689951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 34634969 - 34635019
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaaga 132  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||||||    
T  34634969 tttgataatattttttaactaatatataaatacaaatgttaacatgtaaga 34635019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 27984563 - 27984671
Alignment:
Q  28 tccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcat 126  Q
    |||||||||||||| |||||  | |||||||| ||||||||||||  |  |||| ||||| |||| |||||||||||| ||  ||||||||| ||||| |    
T  27984563 tccgttttaaaatacatgtcacaattttacaacatgcactattcacattgcttactttgaccata-tttttaactaatatacgaatacaaatgttagctt 27984661  T
Q  127 gtaagatgtt 136  Q
    ||||||||||    
T  27984662 gtaagatgtt 27984671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 51021064 - 51021007
Alignment:
Q  81 atttgatcatattttttaactaatgtataa-atacaaatattagcatgtaagatgttc 137  Q
    |||||||||||||||||||||||| |||||   |||||| ||||||||||||||||||    
T  51021064 atttgatcatattttttaactaatatataatgcacaaatgttagcatgtaagatgttc 51021007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 28030914 - 28030830
Alignment:
Q  50 atttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagat 133  Q
    |||||| |||| |||| |||| |  |||||||||| || |||| |||||||||||  ||||||||||||| ||||||||||||||    
T  28030914 atttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgtaagat 28030830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 7568675 - 7568621
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgt 147  Q
    |||||||||||| |||||||| |||| ||||  ||||||||||| ||||||||||    
T  7568675 tttttaactaatatataaatataaatgttagtgtgtaagatgttgtttgatttgt 7568621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 9881344 - 9881405
Alignment:
Q  88 catattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    |||| |||||||||||| |||| ||| |||| ||| ||||||||||||| || |||||||||    
T  9881344 cataatttttaactaatatatacatataaatgttatcatgtaagatgttgttcgatttgtct 9881405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 44452120 - 44452164
Alignment:
Q  106 tataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||||||||||| ||||||||||| || || |||||||||||||    
T  44452120 tataaatacaaatgttagcatgtaaaatattgtttgatttgtctc 44452164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 978082 - 978210
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  978082 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagc 978181  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  978182 atgtaagatgttgtttgatttgtctcgac 978210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 9502884 - 9502756
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||||  ||||||| |||| |||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||    
T  9502884 cctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagc 9502785  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  9502784 atgtaagatgttgtttgatttgtctcgac 9502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 33387225 - 33387353
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| |||||||||| ||||||||||||| |||| ||||||||||| |||||||| |||||  ||| |||||||||||| |||||||||||||||||||    
T  33387225 cctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattagc 33387324  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  33387325 atgtaagatgttgtttgatttgtctcgac 33387353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 14634415 - 14634286
Alignment:
Q  25 tcctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattag 123  Q
    |||||||||| |||||| ||||||||||||| |||| ||||||| ||| |||||||| |||||  ||| |||||||||||| ||||||||||||||||||    
T  14634415 tcctccgtttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattag 14634316  T
Q  124 catgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||||||| ||||||||||||||||    
T  14634315 catgtaagatgttgtttgatttgtctcgac 14634286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 8086287 - 8086159
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| |||||  ||| |||||||||||| ||||||||||||||||| |    
T  8086287 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattaac 8086188  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  8086187 atgtaagatgttgtttgatttgtctcgac 8086159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 33587721 - 33587601
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||| |||||| ||||||||||||| |||| |||| ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  33587721 gtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatattaacatgta 33587622  T
Q  130 agatgttctttgatttgtctc 150  Q
    ||||||| |||||||||||||    
T  33587621 agatgttgtttgatttgtctc 33587601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 3472530 - 3472406
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| |||| |||||||| |||| ||||||||| | |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  3472530 cgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgt 3472431  T
Q  129 aagatgttctttgatttgtctcgac 153  Q
    |||||||| ||||||||||| ||||    
T  3472430 aagatgttgtttgatttgtcgcgac 3472406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 40156203 - 40156331
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| || ||||| |||| |||| ||||||||||| |||||||| ||| | |||| ||||||| ||||||||||||||||||||||||    
T  40156203 cctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaatattagc 40156302  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||||||||||||||||    
T  40156303 atgtaagatgttgtttgatttgtctcgac 40156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 11251129 - 11251247
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    |||||||||||| || |||| |||| ||||||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11251129 aaaatatatgtctaacttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacgatg 11251228  T
Q  135 ttctttgatttgtctcgac 153  Q
    || |||||||| |||||||    
T  11251229 ttatttgatttatctcgac 11251247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 18094338 - 18094210
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||| |||||||| |||| |||| |||||| || ||||| ||| || ||| ||||||||||||||||||||||||||||||||    
T  18094338 cctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaaatattagc 18094239  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| |||| |||||||||||    
T  18094238 atgtaagatgttgtttggtttgtctcgac 18094210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 30355127 - 30355003
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| ||||||||||||| |||||||||||||||| |||| ||| ||| | ||||  ||||||||||| |||||||||||||||||||||||    
T  30355127 cgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaatattagcatgt 30355028  T
Q  129 aagatgttctttgatttgtctcgac 153  Q
    |||||||| ||| ||||||||||||    
T  30355027 aagatgttgtttaatttgtctcgac 30355003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 27109704 - 27109821
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg 134  Q
    ||||||||| |  ||||||||||||||| | ||||||||||||||| |||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  27109704 aaaatatatatttaatttttacaatatgtattattcatttgacttactttgat-atactttttaattaatgtaaaaatacaaatattagcatgtaagatg 27109802  T
Q  135 ttctttgatttgtctcgac 153  Q
    || ||||||||||||||||    
T  27109803 ttgtttgatttgtctcgac 27109821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 24992395 - 24992270
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||  | ||||||||| |||||||||||  |  |||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  24992395 cctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaatattagc 24992296  T
Q  125 atgtaagatgttctttgatttgtctc 150  Q
    || ||||||||| |||||||||||||    
T  24992295 atataagatgttgtttgatttgtctc 24992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 7224175 - 7224298
Alignment:
Q  31 gttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    ||||||||||| |||| || ||||| |||| || |||||| | |||||||| ||||| |||| ||| |||||||| ||||||||||||||||||||||||    
T  7224175 gttttaaaatacatgttcattttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaatattagcatgta 7224274  T
Q  130 agatgttctttgatttgtctcgac 153  Q
    | ||||| ||||||||||||||||    
T  7224275 aaatgttgtttgatttgtctcgac 7224298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 11785973 - 11785856
Alignment:
Q  36 aaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatac-aaatattagcatgtaagat 133  Q
    |||||| ||||  ||||||| |||| || |||||||| |||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  11785973 aaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaaaatattaccatgtaagat 11785874  T
Q  134 gttctttgatttgtctcg 151  Q
    ||| |||| |||||||||    
T  11785873 gttgtttggtttgtctcg 11785856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 9050765 - 9050706
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9050765 tttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctcga 9050706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 11761128 - 11761196
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  11761128 tttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgtctc 11761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 34111968 - 34112090
Alignment:
Q  27 ctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagca 125  Q
    |||||||| |||||| ||||| | ||||| |||| ||||||||||| |||||||| |||||  ||||||||| |||||| ||||||||||||||||| ||    
T  34111968 ctccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaaatattatca 34112067  T
Q  126 tgtaagatgttctttgatttgtctcgac 153  Q
    ||||||||     |||||||||||||||    
T  34112068 tgtaagat-----ttgatttgtctcgac 34112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 32017218 - 32017329
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||| |  | |||||  || |||| ||||||  | ||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  32017218 cctccgttttaaaatacatgacgcaattttatgatgtgcaatattcacataacttactttgatcatattttttaactaatatataaatacaaatgttagc 32017317  T
Q  125 atgtaagatgtt 136  Q
    ||||||||||||    
T  32017318 atgtaagatgtt 32017329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 38916507 - 38916380
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||  |||||| || |||||||||||||  ||||||  ||||| |||| |||||||||||  ||||||||||||| |||||    
T  38916507 cctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaatgttagc 38916408  T
Q  125 atgtaagatgttctttgatttgtctcga 152  Q
    |||| ||||||| || ||||||| ||||    
T  38916407 atgtgagatgttattcgatttgtttcga 38916380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 12456871 - 12456773
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||||||| ||||||||| |  | ||||| ||| ||||||||||||||||||| || |||||||||| |||| |||||||||||| ||||||||||||    
T  12456871 ttttacaatgtgcactatttacataacttactttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatgttgtttgatttgtct 12456773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 24916436 - 24916378
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||    
T  24916436 ttttttaactaatttataaatacaaatattagcatataagatgttgtttgatttgtctc 24916378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 32400399 - 32400457
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||    
T  32400399 ttttttaactaatatataaatacaaatattagcatgtaagatgttgtttaatttgtctc 32400457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 12447625 - 12447547
Alignment:
Q  74 ttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcgac 153  Q
    |||||||| ||||| |||| |||||||||||||| ||||||||  ||||||||||||||||||| ||||||||||||||||    
T  12447625 ttgacttactttgaccatactttttaactaatgtttaaataca--tattagcatgtaagatgttgtttgatttgtctcgac 12447547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 18998755 - 18998819
Alignment:
Q  88 catattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||| |||||||||| ||||    
T  18998755 catattttttaactaatatataaatacaaatgttagtatgtaagatgttgtttgatttgtttcga 18998819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 3422400 - 3422343
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||||    
T  3422400 ttttttaactaatatataaatacaaatgttagcatgtaagatgttgattgatttgtct 3422343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 27579623 - 27579562
Alignment:
Q  89 atattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||||| ||||||||||||| |||||||||||||| |  |||||||||||||    
T  27579623 atattttttaactaatatataaatacaaatgttagcatgtaagatataatttgatttgtctc 27579562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 12007889 - 12007761
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||||  ||||||| | | ||||||||| |  ||||||| ||||| | || ||||||| |||| |||||||||||||  ||||    
T  12007889 cctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatgctagc 12007790  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||| ||||| |||||||||| |||||    
T  12007789 atgtaaaatgttgtttgatttgtttcgac 12007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 12360011 - 12359951
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||| ||||||||||||| |||||||| ||||| || |||||||||||||||    
T  12360011 ttttttaactaatatataaatacaaatgttagcatgaaagatattgtttgatttgtctcga 12359951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 6996022 - 6996112
Alignment:
Q  62 tgcactattcatttgacttatttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    |||||||||||  | |||||||| |  |||||||||||||||| |||||||| |||| ||| ||||||| || || |||||||||||||||    
T  6996022 tgcactattcacataacttatttaactatattttttaactaatatataaatataaatgttaccatgtaaaatattgtttgatttgtctcga 6996112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 26387079 - 26387017
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatt 144  Q
    ||||||||||||||||||||||  |||||||| |||| ||||||| ||||||||| |||||||    
T  26387079 tttgatcatattttttaactaacatataaatataaatgttagcatttaagatgttgtttgatt 26387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 37495672 - 37495712
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatatta 122  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  37495672 tttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 13812058 - 13812156
Alignment:
Q  32 ttttaaaatatatgtccaatttttacaatatgcactattcatttgacttatttga-tcatattttttaactaatgtataaatacaaatattagcatgta 129  Q
    |||||||||| || ||  |||||||||||||| | ||||||  | | |||||| | |||||||||||||||||| ||| |||||||||||||| |||||    
T  13812058 ttttaaaatacatatcgtatttttacaatatgtattattcacataatttattttaatcatattttttaactaatatatcaatacaaatattagtatgta 13812156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 39776703 - 39776747
Alignment:
Q  93 tttttaactaatgtataaatacaaatattagcatgtaagatgttc 137  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||    
T  39776703 tttttaactaacatataaatacaaatattagcatgtaaaatgttc 39776747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 17476949 - 17476993
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgtt 136  Q
    ||||||||||||| ||||||||||||| |||| || |||||||||    
T  17476949 ttttttaactaatatataaatacaaatgttagtatataagatgtt 17476993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 68022 - 67898
Alignment:
Q  30 cgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgt 128  Q
    ||||| |||||| |||||||||||||  ||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||    
T  68022 cgtttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgt 67923  T
Q  129 aagatgttctttgatttgtctcgac 153  Q
    |||||||| ||||||||||||||||    
T  67922 aagatgttgtttgatttgtctcgac 67898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 70966 - 71090
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||| ||| |||||| ||||||||||||| |||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  70966 cctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccatatttt-taactaatgtataaatacaaatattagc 71064  T
Q  125 atgtaagatgttctttgatttgtctc 150  Q
    || ||||||||| |||||||||||||    
T  71065 atttaagatgttgtttgatttgtctc 71090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 100904 - 100776
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| |||| ||| |||| |||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  100904 cctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatattagc 100805  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
     ||||||||||| ||||||||||||||||    
T  100804 gtgtaagatgttgtttgatttgtctcgac 100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 13974 - 13846
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    |||||||||||||||| ||||| ||| |||  ||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||| ||||||||||    
T  13974 cctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagc 13875  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||| ||||||||||||    
T  13874 atgtaagatgttgtttaatttgtctcgac 13846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 9377 - 9432
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgactta 81  Q
    ||||||||| |||||| ||||| ||||||| |||| ||||||||||| ||||||||    
T  9377 cctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgactta 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 162094 - 161966
Alignment:
Q  26 cctccgttttaaaatatatgtccaatttttacaatatgcactattcatttgacttat-ttgatcatattttttaactaatgtataaatacaaatattagc 124  Q
    ||||||||| |||||| ||||| |||||||  ||| ||||||||||| ||||||||  |||| |||| ||||||||||||||||||||||||||||||||    
T  162094 cctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaatattagc 161995  T
Q  125 atgtaagatgttctttgatttgtctcgac 153  Q
    |||||||||||| ||| |||||| |||||    
T  161994 atgtaagatgttgtttaatttgtttcgac 161966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 9064 - 8965
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||| ||||||  | ||||| ||||| || |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  9064 ttttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 8965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 138261 - 138162
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||| ||||||  | ||||| ||||| || |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  138261 ttttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 138162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 22811 - 22910
Alignment:
Q  52 ttttacaatatgcactattcatttgacttattt-gatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||| ||||||  | |||||||| || || ||||||||||| || ||||||||||||| ||||||||||||||||| |||||||||||||    
T  22811 ttttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 22910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 1586 - 1650
Alignment:
Q  86 atcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| || || ||||||||||    
T  1586 atcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctc 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 53620 - 53550
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctcga 152  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| |||||||||| ||||    
T  53620 tttgatcatattttttaactaatatataattacaaattttagcatgcaagatgttgtttgatttgtttcga 53550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 217065 - 217007
Alignment:
Q  92 ttttttaactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||| |||| ||||||||||||| ||||||| ||||||||| |||||||||||||    
T  217065 ttttttaagtaatatataaatacaaatgttagcatataagatgttgtttgatttgtctc 217007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 28852 - 28784
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatg-ttctttgatttgtct 149  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||    
T  28852 tttgaccatattttttaactaatttataaatacaaatattagcatataagatgtttgtttgatttgtct 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 4010 - 4081
Alignment:
Q  82 tttgatcatattttttaactaatgtataaatacaaatattagcatgtaaga-tgttctttgatttgtctcga 152  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||||| | || |||||||||||||||    
T  4010 tttgaccatattttttaactaatatataaatacaaatgttagcatgtaagattattttttgatttgtctcga 4081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 315673 - 315634
Alignment:
Q  111 atacaaatattagcatgtaagatgttctttgatttgtctc 150  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  315673 atacaaatgttagcatgtaagatgttgtttgatttgtctc 315634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 20592 - 20490
Alignment:
Q  52 ttttacaatatgcactattcatttgactta-tttgatcatattttt-taactaatgtataaatacaaatattagcatgtaagatgttctttgatttgtct 149  Q
    ||||||| |||||||||||| |  || ||| ||||||||||||||| | | | || |||||||| |||||||| ||||| ||||||| || |||||||||    
T  20592 ttttacagtatgcactattcgtaagatttagtttgatcatatttttgttattgatatataaatataaatattaacatgtgagatgttattagatttgtct 20493  T
Q  150 cga 152  Q
    |||    
T  20492 cga 20490  T

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