View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15663_high_15 (Length: 327)
Name: NF15663_high_15
Description: NF15663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15663_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 22 - 320
Target Start/End: Original strand, 12167336 - 12167634
Alignment:
| Q |
22 |
ttggagaaggtgctgctattgttgaagaagattcataattaggtaactttggattaggagagatctgaatcatatttgagaatatgtttttacatggtct |
121 |
Q |
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| T |
12167336 |
ttggagaaggtgctgctattgttgaagaagattcataattaggtaactttggattaggagagatctgaatcatatttgagaatatgtttttacatggtct |
12167435 |
T |
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| Q |
122 |
tgatattgatctcaactcatcaagtgcaaaaacagaagcagaagaagatgatgaagtagtaacattaacaccagaagaagcaacatcaattatagaagca |
221 |
Q |
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| T |
12167436 |
tgatattgatctcaactcatcaagtgcaaaaacagaagcagaagaagatgatgaagtagtaacactaacaccagaagaagcaacatcaattatagaagca |
12167535 |
T |
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| Q |
222 |
ggtgaagtagtactagtagtacttgtgatgttgaagtaagaagaagaaggtatatgatcaagttcttgtaaaaatggatctcttaaagttgagaataat |
320 |
Q |
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| T |
12167536 |
ggtgaagtagtactagtagtacttgtgatgttgaagtaagaagaagaaggtatatgatcaagttcttgtaaaaatggatctcttaaagttgagaataat |
12167634 |
T |
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