View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15663_high_22 (Length: 254)
Name: NF15663_high_22
Description: NF15663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15663_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 37016264 - 37016026
Alignment:
| Q |
1 |
ttataccaagttcaaaagacaaatattattaataaataaaggagagaataacgattgtgaggtgcctctaaaaaatcaattgcgatgttgatagctaaaa |
100 |
Q |
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| T |
37016264 |
ttataccaagttcaaaagacaaatattattaataaataaaggagagaataacgatcgtgaggtgcctctaaaaaatcaattgcgatgttgatagctaaaa |
37016165 |
T |
|
| Q |
101 |
atgaatcaagtcaattcaaatttagtttgaaactcaaacactaaaattaattcactcaaacttaattcatgaatcaaataagagtgaagttaagcaagaa |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
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| T |
37016164 |
atgaatcaagtcaattca---ttagtttgaaactcaaacactaaaattaattcactcaaacttaattcatgaattaaataagagtgaagttaagaaagaa |
37016068 |
T |
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| Q |
201 |
attaagtttgttaactaaatgagtagaacataagttatatat |
242 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||| |
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| T |
37016067 |
attaagttcgttaactaaatgagtagaacataagttatatat |
37016026 |
T |
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