View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15664_high_28 (Length: 210)
Name: NF15664_high_28
Description: NF15664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15664_high_28 |
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Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 47055476 - 47055651
Alignment:
| Q |
22 |
acacaaaacaattgtgtttcattttggataaaaatttatatatatttttgccaaatgaatactgttaacttgtatcttatagtagacatttttctaaaaa |
121 |
Q |
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| T |
47055476 |
acacaaaacaattgtgtttcattttggataaaaatttatatatatttttgccaaatgaatactgtgaacttgtatcttatagtagacatttttctaaaaa |
47055575 |
T |
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| Q |
122 |
gtgattaaagagtaattatgaaaatgtgatgagctatatattaagagggtgtaacaacatgtatgtaagttcttct |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
47055576 |
gtgattaaagagtaattatgaaaatgtgatgagctatatattaagagggtgtaacaacatgtatgtaagtttttct |
47055651 |
T |
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