View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15664_high_4 (Length: 466)
Name: NF15664_high_4
Description: NF15664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15664_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 406; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 39 - 460
Target Start/End: Complemental strand, 25524017 - 25523596
Alignment:
| Q |
39 |
cactggaacagtgttttctatctcatgatgatgattgaatttcttcggtaatcacttacctattttccatgtcaaaaataacactcctaaaacatatcat |
138 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
25524017 |
cactggaacagtgttttctatctcatgatgatgattgaatttcttcggtaatcacttacctattttccatgtcaaaaagaacactcctaaaacatatcaa |
25523918 |
T |
|
| Q |
139 |
catatttttatgaaataaatcattcagtacaaacgataacacaattggttacattcatagttcatgtgatgttgtcagttgtcacaaagtacaagaaaaa |
238 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25523917 |
cttatttttatgaaataaatcattcagtacaaacgataacacaattggttacattcatagttcatgtgatgttgtcagttgtcacaaagtacaagaaaaa |
25523818 |
T |
|
| Q |
239 |
agagagtattgtttctcaatttttctctaaatttttccttcctctcttcaaagcactcttattttctgcctccaaactcaaaaaagagatgtagctagct |
338 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25523817 |
agagagtattgtttctgaatttttctctaaatttttccttcctctcttcaaagcactcttattttctgcctccaaactcaaaaaagagatgtagctagct |
25523718 |
T |
|
| Q |
339 |
accaccgcaaccgattgctacttttccagagttcaccctgtgccaaaatcctatgtgtcatgacatgccattttcacagtggcacatttgtaccgtgtca |
438 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25523717 |
accaccgcaaccgattgctacttttccagagttcaccctgtgccaaaatcctatgtgtcatgacatgccattttcacagtggcacatttgtaccgtgtca |
25523618 |
T |
|
| Q |
439 |
tctttgtccttaagccacacat |
460 |
Q |
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|||||||||||||||||||||| |
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| T |
25523617 |
tctttgtccttaagccacacat |
25523596 |
T |
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