View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15666_low_1 (Length: 789)

Name: NF15666_low_1
Description: NF15666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15666_low_1
NF15666_low_1
[»] chr1 (57 HSPs)
chr1 (536-785)||(290012-290257)
chr1 (296-497)||(290596-290802)
chr1 (73-202)||(51590434-51590560)
chr1 (73-202)||(13321718-13321844)
chr1 (90-202)||(19998415-19998524)
chr1 (141-207)||(45977093-45977159)
chr1 (73-196)||(18038698-18038818)
chr1 (73-192)||(48565541-48565657)
chr1 (88-202)||(22182798-22182909)
chr1 (137-202)||(25238652-25238717)
chr1 (90-202)||(15699468-15699577)
chr1 (138-200)||(49944839-49944901)
chr1 (143-211)||(47678251-47678319)
chr1 (73-201)||(52030886-52031004)
chr1 (203-285)||(290917-291000)
chr1 (143-202)||(26924298-26924357)
chr1 (98-195)||(27687884-27687978)
chr1 (73-120)||(38738014-38738061)
chr1 (138-204)||(38040356-38040422)
chr1 (143-200)||(34174892-34174949)
chr1 (143-188)||(34662766-34662811)
chr1 (138-199)||(38738011-38738072)
chr1 (147-207)||(6340655-6340715)
chr1 (135-179)||(12175528-12175572)
chr1 (143-207)||(26760172-26760236)
chr1 (449-492)||(31043011-31043055)
chr1 (88-202)||(31050254-31050365)
chr1 (449-496)||(33791791-33791839)
chr1 (88-195)||(43850982-43851088)
chr1 (143-207)||(44939065-44939129)
chr1 (449-492)||(48947214-48947258)
chr1 (73-120)||(519916-519963)
chr1 (449-491)||(1656447-1656490)
chr1 (143-202)||(13320307-13320366)
chr1 (141-200)||(19998494-19998553)
chr1 (449-495)||(35543455-35543502)
chr1 (449-495)||(39973899-39973946)
chr1 (143-202)||(43929350-43929409)
chr1 (141-200)||(44224352-44224411)
chr1 (142-189)||(45848956-45849003)
chr1 (73-120)||(49944851-49944898)
chr1 (143-189)||(25021248-25021294)
chr1 (144-202)||(43929431-43929489)
chr1 (98-202)||(52279277-52279378)
chr1 (141-198)||(5966958-5967015)
chr1 (141-202)||(15699547-15699608)
chr1 (141-202)||(18038771-18038832)
chr1 (141-202)||(22182769-22182830)
chr1 (98-173)||(29438171-29438243)
chr1 (141-202)||(29438221-29438282)
chr1 (141-202)||(29892213-29892274)
chr1 (143-196)||(31050335-31050388)
chr1 (143-204)||(37178995-37179056)
chr1 (79-120)||(38590149-38590190)
chr1 (147-188)||(47844622-47844663)
chr1 (157-202)||(48565626-48565671)
chr1 (143-204)||(50155383-50155444)
[»] chr8 (44 HSPs)
chr8 (73-202)||(34745261-34745387)
chr8 (73-202)||(43292572-43292698)
chr8 (88-202)||(43932082-43932193)
chr8 (141-204)||(29690519-29690582)
chr8 (141-202)||(35583966-35584027)
chr8 (85-196)||(29690446-29690554)
chr8 (73-192)||(38494253-38494369)
chr8 (143-198)||(13831883-13831938)
chr8 (85-202)||(13831905-13832019)
chr8 (141-202)||(34604864-34604925)
chr8 (88-202)||(43409867-43409978)
chr8 (88-202)||(45372709-45372820)
chr8 (143-202)||(7548501-7548560)
chr8 (73-198)||(9633089-9633211)
chr8 (88-189)||(38298534-38298632)
chr8 (98-202)||(34604785-34604886)
chr8 (73-204)||(16448791-16448919)
chr8 (141-202)||(43932053-43932114)
chr8 (85-202)||(35583887-35584001)
chr8 (135-202)||(35794603-35794670)
chr8 (138-213)||(5031457-5031532)
chr8 (143-202)||(6899504-6899563)
chr8 (143-202)||(12958860-12958919)
chr8 (143-202)||(22429619-22429678)
chr8 (143-202)||(44796426-44796485)
chr8 (90-194)||(9550144-9550245)
chr8 (396-491)||(2376726-2376823)
chr8 (90-201)||(24599674-24599782)
chr8 (143-188)||(35011296-35011341)
chr8 (141-202)||(43409838-43409899)
chr8 (85-196)||(44579923-44580031)
chr8 (141-198)||(45180122-45180179)
chr8 (141-202)||(45372788-45372849)
chr8 (85-202)||(7548527-7548642)
chr8 (138-198)||(30734526-30734586)
chr8 (449-495)||(1876534-1876581)
chr8 (141-200)||(24915252-24915311)
chr8 (143-202)||(32575259-32575318)
chr8 (143-202)||(36366029-36366088)
chr8 (449-491)||(44220762-44220805)
chr8 (73-157)||(40645728-40645809)
chr8 (152-193)||(8242151-8242192)
chr8 (144-209)||(10839760-10839825)
chr8 (140-189)||(16448871-16448920)
[»] chr3 (53 HSPs)
chr3 (91-202)||(53703734-53703842)
chr3 (73-202)||(31376193-31376319)
chr3 (73-202)||(39616929-39617055)
chr3 (83-204)||(44118211-44118329)
chr3 (72-202)||(19227325-19227452)
chr3 (98-202)||(45113777-45113878)
chr3 (144-202)||(43901667-43901725)
chr3 (85-204)||(27302109-27302225)
chr3 (88-175)||(2544489-2544574)
chr3 (141-201)||(27302084-27302144)
chr3 (91-195)||(36191485-36191589)
chr3 (141-204)||(53284399-53284462)
chr3 (152-202)||(2544441-2544491)
chr3 (141-198)||(16123839-16123896)
chr3 (141-202)||(42896146-42896207)
chr3 (140-200)||(21944295-21944355)
chr3 (88-202)||(48643637-48643748)
chr3 (80-169)||(8769171-8769257)
chr3 (449-495)||(12140152-12140199)
chr3 (98-192)||(19899626-19899718)
chr3 (143-197)||(42896227-42896281)
chr3 (141-194)||(50100206-50100259)
chr3 (88-202)||(48346483-48346594)
chr3 (143-202)||(2544544-2544603)
chr3 (98-202)||(50100237-50100339)
chr3 (143-202)||(51517042-51517101)
chr3 (144-202)||(5177851-5177909)
chr3 (101-169)||(8764269-8764334)
chr3 (395-495)||(25317812-25317914)
chr3 (144-202)||(28406553-28406611)
chr3 (141-195)||(45113745-45113799)
chr3 (138-188)||(54087416-54087466)
chr3 (396-495)||(14146107-14146208)
chr3 (85-204)||(16123759-16123874)
chr3 (143-188)||(29457858-29457903)
chr3 (141-202)||(31376179-31376240)
chr3 (88-195)||(45746482-45746586)
chr3 (141-202)||(50659953-50660014)
chr3 (79-120)||(52864975-52865016)
chr3 (167-207)||(23537253-23537293)
chr3 (85-195)||(43901592-43901699)
chr3 (143-194)||(19674593-19674644)
chr3 (143-202)||(21662971-21663030)
chr3 (162-201)||(48643609-48643648)
chr3 (143-202)||(53441911-53441970)
chr3 (141-210)||(9236082-9236152)
chr3 (143-185)||(19649600-19649642)
chr3 (88-160)||(51980434-51980503)
chr3 (141-202)||(8769217-8769277)
chr3 (90-193)||(27363196-27363296)
chr3 (141-202)||(39616915-39616976)
chr3 (396-491)||(45757940-45758037)
chr3 (140-201)||(50660020-50660081)
[»] chr7 (65 HSPs)
chr7 (73-201)||(45025599-45025724)
chr7 (73-207)||(24164515-24164646)
chr7 (88-202)||(10674127-10674238)
chr7 (73-202)||(33901042-33901168)
chr7 (98-202)||(41487795-41487896)
chr7 (88-212)||(47612284-47612405)
chr7 (73-209)||(13860236-13860368)
chr7 (135-201)||(48948947-48949015)
chr7 (88-202)||(41088856-41088967)
chr7 (85-207)||(45123244-45123363)
chr7 (88-197)||(29559470-29559576)
chr7 (79-188)||(29835108-29835214)
chr7 (85-204)||(41395692-41395808)
chr7 (141-202)||(41487874-41487935)
chr7 (141-201)||(22618246-22618306)
chr7 (449-492)||(23682504-23682547)
chr7 (143-202)||(24932454-24932513)
chr7 (141-200)||(41395668-41395727)
chr7 (97-202)||(47484063-47484165)
chr7 (73-197)||(3633209-3633330)
chr7 (98-202)||(18064726-18064827)
chr7 (88-200)||(22618169-22618278)
chr7 (103-202)||(12806912-12807008)
chr7 (143-204)||(24932385-24932446)
chr7 (101-196)||(28248441-28248533)
chr7 (143-188)||(32811396-32811441)
chr7 (137-202)||(40198608-40198673)
chr7 (143-203)||(1366598-1366658)
chr7 (73-200)||(3633197-3633321)
chr7 (158-210)||(28248535-28248587)
chr7 (143-202)||(4826846-4826905)
chr7 (143-202)||(28020005-28020064)
chr7 (141-192)||(45123328-45123379)
chr7 (73-173)||(7456437-7456534)
chr7 (152-202)||(27320388-27320438)
chr7 (395-495)||(34299740-34299842)
chr7 (449-491)||(48837977-48838019)
chr7 (143-188)||(31227577-31227622)
chr7 (141-202)||(40234770-40234831)
chr7 (88-163)||(40234799-40234871)
chr7 (162-207)||(41088956-41089001)
chr7 (141-202)||(47612373-47612434)
chr7 (453-496)||(5482463-5482507)
chr7 (141-201)||(7456424-7456484)
chr7 (143-187)||(27231853-27231897)
chr7 (143-195)||(31903035-31903087)
chr7 (138-202)||(36245456-36245520)
chr7 (98-179)||(7999491-7999569)
chr7 (143-202)||(28677321-28677380)
chr7 (159-202)||(29559441-29559484)
chr7 (143-202)||(36245380-36245439)
chr7 (142-197)||(37006465-37006520)
chr7 (143-202)||(47280178-47280236)
chr7 (141-200)||(47484027-47484086)
chr7 (141-207)||(10674206-10674272)
chr7 (395-495)||(24610835-24610937)
chr7 (144-202)||(27231919-27231977)
chr7 (101-200)||(37006502-37006599)
chr7 (143-188)||(8566099-8566144)
chr7 (143-188)||(16861530-16861575)
chr7 (141-202)||(24164599-24164660)
chr7 (143-192)||(40599998-40600047)
chr7 (85-118)||(40599998-40600031)
chr7 (143-200)||(41850681-41850738)
chr7 (143-188)||(42456998-42457043)
[»] chr4 (86 HSPs)
chr4 (73-199)||(52966413-52966536)
chr4 (73-196)||(52136717-52136837)
chr4 (73-202)||(4418101-4418227)
chr4 (85-200)||(1140871-1140983)
chr4 (141-213)||(43141759-43141831)
chr4 (73-202)||(29686418-29686544)
chr4 (73-201)||(42159978-42160103)
chr4 (141-207)||(54864147-54864213)
chr4 (73-192)||(31853081-31853197)
chr4 (88-202)||(25756745-25756856)
chr4 (88-201)||(54673315-54673425)
chr4 (85-202)||(54864068-54864182)
chr4 (90-202)||(33615783-33615892)
chr4 (141-202)||(33622884-33622945)
chr4 (85-204)||(43141796-43141912)
chr4 (73-198)||(1205091-1205212)
chr4 (135-202)||(24100763-24100830)
chr4 (141-202)||(25874783-25874844)
chr4 (88-202)||(27587279-27587390)
chr4 (85-175)||(40592742-40592829)
chr4 (143-207)||(50511244-50511308)
chr4 (85-202)||(33622910-33623024)
chr4 (98-207)||(35929009-35929115)
chr4 (138-195)||(24100884-24100941)
chr4 (141-202)||(37895259-37895320)
chr4 (88-207)||(56491105-56491221)
chr4 (90-204)||(9813491-9813602)
chr4 (158-202)||(32193479-32193523)
chr4 (85-202)||(35877318-35877432)
chr4 (143-202)||(36196369-36196428)
chr4 (143-202)||(52136703-52136762)
chr4 (98-202)||(8347535-8347636)
chr4 (141-207)||(27587245-27587311)
chr4 (426-495)||(37461501-37461571)
chr4 (141-202)||(1100900-1100961)
chr4 (141-202)||(29686404-29686465)
chr4 (143-204)||(48195975-48196036)
chr4 (143-195)||(35877399-35877451)
chr4 (140-204)||(41116564-41116628)
chr4 (85-203)||(50511275-50511390)
chr4 (141-200)||(7086214-7086273)
chr4 (157-204)||(19350614-19350661)
chr4 (141-192)||(40592726-40592777)
chr4 (73-120)||(41116580-41116627)
chr4 (143-202)||(43020840-43020899)
chr4 (143-202)||(47866120-47866179)
chr4 (449-495)||(49951742-49951789)
chr4 (99-200)||(50511471-50511569)
chr4 (143-193)||(23208647-23208697)
chr4 (143-189)||(34226404-34226450)
chr4 (140-202)||(36196447-36196509)
chr4 (98-202)||(37895298-37895399)
chr4 (143-188)||(20459259-20459304)
chr4 (141-202)||(25756716-25756777)
chr4 (141-202)||(38208332-38208393)
chr4 (157-202)||(50511392-50511437)
chr4 (141-202)||(56491076-56491137)
chr4 (141-197)||(3345400-3345456)
chr4 (101-203)||(23558952-23559051)
chr4 (143-202)||(4418182-4418241)
chr4 (141-199)||(8347498-8347557)
chr4 (143-202)||(20745336-20745395)
chr4 (137-192)||(22210803-22210858)
chr4 (143-202)||(30191981-30192040)
chr4 (449-492)||(31262926-31262969)
chr4 (143-202)||(40780254-40780313)
chr4 (140-202)||(43556773-43556836)
chr4 (143-202)||(53225729-53225788)
chr4 (141-196)||(54673393-54673448)
chr4 (144-202)||(20459326-20459384)
chr4 (158-200)||(22019940-22019982)
chr4 (85-135)||(22019964-22020014)
chr4 (88-204)||(32193508-32193621)
chr4 (144-202)||(42804260-42804318)
chr4 (144-202)||(43020760-43020818)
chr4 (144-202)||(47866040-47866098)
chr4 (143-188)||(3043876-3043921)
chr4 (147-204)||(16412236-16412293)
chr4 (143-188)||(27841915-27841960)
chr4 (141-202)||(33615862-33615923)
chr4 (141-198)||(35929093-35929149)
chr4 (73-126)||(42670782-42670835)
chr4 (161-202)||(43556695-43556736)
chr4 (378-423)||(44088347-44088392)
chr4 (73-118)||(48361070-48361115)
chr4 (143-188)||(55190685-55190730)
[»] scaffold0767 (2 HSPs)
scaffold0767 (88-202)||(3813-3924)
scaffold0767 (141-193)||(3892-3944)
[»] chr2 (77 HSPs)
chr2 (73-195)||(3365293-3365412)
chr2 (98-202)||(28143788-28143889)
chr2 (88-204)||(38448971-38449084)
chr2 (90-200)||(41464720-41464827)
chr2 (73-197)||(6971579-6971700)
chr2 (98-202)||(15239735-15239836)
chr2 (88-202)||(25795271-25795382)
chr2 (88-202)||(45076346-45076457)
chr2 (98-202)||(36103436-36103537)
chr2 (141-202)||(40534517-40534578)
chr2 (141-201)||(45076425-45076485)
chr2 (395-495)||(33068540-33068642)
chr2 (141-202)||(36103397-36103458)
chr2 (138-202)||(4063351-4063415)
chr2 (136-207)||(4755461-4755532)
chr2 (449-495)||(6334724-6334771)
chr2 (141-204)||(6971653-6971716)
chr2 (138-201)||(20555263-20555326)
chr2 (143-202)||(45034482-45034541)
chr2 (143-202)||(45571114-45571173)
chr2 (143-202)||(45574781-45574840)
chr2 (143-202)||(45578448-45578507)
chr2 (143-202)||(45582115-45582174)
chr2 (143-202)||(45585782-45585841)
chr2 (143-202)||(45589449-45589508)
chr2 (143-202)||(45593116-45593175)
chr2 (143-202)||(45596783-45596842)
chr2 (143-202)||(45600450-45600509)
chr2 (143-202)||(45604117-45604176)
chr2 (143-202)||(45607784-45607843)
chr2 (143-202)||(45611451-45611510)
chr2 (143-202)||(45615118-45615177)
chr2 (88-192)||(11687508-11687609)
chr2 (243-285)||(29685772-29685814)
chr2 (98-202)||(40534556-40534657)
chr2 (144-202)||(45571034-45571092)
chr2 (144-202)||(45574701-45574759)
chr2 (144-202)||(45578368-45578426)
chr2 (144-202)||(45582035-45582093)
chr2 (144-202)||(45585702-45585760)
chr2 (144-202)||(45589369-45589427)
chr2 (144-202)||(45593036-45593094)
chr2 (144-202)||(45596703-45596761)
chr2 (144-202)||(45600370-45600428)
chr2 (144-202)||(45604037-45604095)
chr2 (144-202)||(45607704-45607762)
chr2 (144-202)||(45611371-45611429)
chr2 (144-202)||(45615038-45615096)
chr2 (141-195)||(45650991-45651045)
chr2 (141-202)||(3365279-3365340)
chr2 (143-188)||(3838436-3838481)
chr2 (143-188)||(4044593-4044638)
chr2 (138-202)||(7943519-7943584)
chr2 (396-491)||(9049148-9049245)
chr2 (143-188)||(15384511-15384556)
chr2 (85-199)||(23464526-23464638)
chr2 (135-195)||(44283609-44283670)
chr2 (135-199)||(6971503-6971567)
chr2 (141-189)||(11030275-11030323)
chr2 (162-202)||(25795242-25795282)
chr2 (140-192)||(27306725-27306777)
chr2 (88-202)||(27311610-27311721)
chr2 (449-495)||(4655013-4655060)
chr2 (141-188)||(7833300-7833347)
chr2 (137-192)||(9373473-9373528)
chr2 (73-120)||(11030275-11030322)
chr2 (143-202)||(12486077-12486136)
chr2 (141-204)||(15239694-15239757)
chr2 (449-495)||(24389675-24389722)
chr2 (449-491)||(30822772-30822815)
chr2 (394-476)||(32066749-32066832)
chr2 (73-120)||(42698147-42698194)
chr2 (143-189)||(43135108-43135154)
chr2 (144-202)||(45034402-45034460)
chr2 (248-285)||(6411442-6411479)
chr2 (141-202)||(9152462-9152523)
chr2 (88-192)||(21424934-21425036)
[»] chr6 (22 HSPs)
chr6 (73-200)||(8264978-8265102)
chr6 (98-196)||(359588-359683)
chr6 (88-201)||(29284531-29284641)
chr6 (143-202)||(28605574-28605633)
chr6 (141-202)||(30438826-30438887)
chr6 (88-202)||(2913337-2913448)
chr6 (141-202)||(2913416-2913477)
chr6 (143-195)||(24986017-24986069)
chr6 (101-201)||(12217537-12217635)
chr6 (88-192)||(9343134-9343235)
chr6 (143-188)||(1836978-1837023)
chr6 (157-202)||(23916226-23916271)
chr6 (85-200)||(28605600-28605712)
chr6 (85-195)||(30438754-30438861)
chr6 (143-202)||(2943327-2943386)
chr6 (97-202)||(12605652-12605754)
chr6 (136-187)||(33127864-33127915)
chr6 (90-198)||(10145250-10145355)
chr6 (90-136)||(12240167-12240213)
chr6 (138-200)||(28630759-28630821)
chr6 (243-285)||(33970394-33970436)
chr6 (143-204)||(8029507-8029568)
[»] chr5 (45 HSPs)
chr5 (85-204)||(20502089-20502205)
chr5 (88-202)||(73817-73928)
chr5 (88-202)||(13932465-13932576)
chr5 (141-208)||(20502170-20502237)
chr5 (88-198)||(13278894-13279001)
chr5 (88-202)||(29874350-29874461)
chr5 (88-202)||(32455172-32455283)
chr5 (90-202)||(27600763-27600871)
chr5 (98-202)||(29451897-29451998)
chr5 (157-202)||(30132887-30132932)
chr5 (141-202)||(33247296-33247357)
chr5 (141-202)||(38978825-38978886)
chr5 (85-202)||(38978746-38978860)
chr5 (98-202)||(5355555-5355656)
chr5 (98-202)||(7537025-7537126)
chr5 (141-202)||(7537104-7537165)
chr5 (141-202)||(29002746-29002807)
chr5 (141-202)||(29874321-29874382)
chr5 (83-178)||(10228091-10228187)
chr5 (143-202)||(1015160-1015219)
chr5 (143-202)||(5355636-5355695)
chr5 (157-196)||(9630245-9630284)
chr5 (105-202)||(19211284-19211378)
chr5 (143-202)||(22731263-22731322)
chr5 (143-201)||(1138223-1138281)
chr5 (144-202)||(8680627-8680685)
chr5 (143-189)||(11142448-11142494)
chr5 (141-207)||(27488346-27488412)
chr5 (141-202)||(73788-73849)
chr5 (143-188)||(15968395-15968440)
chr5 (98-197)||(24173463-24173559)
chr5 (143-188)||(29031055-29031100)
chr5 (141-202)||(29451976-29452036)
chr5 (90-188)||(13128211-13128306)
chr5 (449-496)||(38594983-38595031)
chr5 (85-202)||(9630265-9630379)
chr5 (143-202)||(13789736-13789795)
chr5 (167-202)||(30132846-30132881)
chr5 (135-198)||(35318591-35318654)
chr5 (73-120)||(36434761-36434808)
chr5 (141-203)||(13278969-13279031)
chr5 (141-202)||(13932544-13932605)
chr5 (141-202)||(24173424-24173485)
chr5 (85-204)||(33247322-33247437)
chr5 (143-192)||(33970671-33970720)
[»] scaffold0200 (2 HSPs)
scaffold0200 (141-207)||(25613-25679)
scaffold0200 (85-204)||(25644-25761)
[»] scaffold0110 (2 HSPs)
scaffold0110 (90-202)||(40226-40335)
scaffold0110 (143-202)||(1617-1676)
[»] scaffold0533 (2 HSPs)
scaffold0533 (88-199)||(3273-3381)
scaffold0533 (141-195)||(3251-3305)
[»] scaffold0059 (2 HSPs)
scaffold0059 (88-202)||(26619-26730)
scaffold0059 (141-202)||(26590-26651)
[»] scaffold0023 (2 HSPs)
scaffold0023 (91-202)||(112859-112967)
scaffold0023 (141-202)||(112827-112888)
[»] scaffold0287 (2 HSPs)
scaffold0287 (73-197)||(12755-12876)
scaffold0287 (73-200)||(12764-12888)
[»] scaffold0027 (1 HSPs)
scaffold0027 (88-193)||(5447-5549)
[»] scaffold0010 (1 HSPs)
scaffold0010 (449-495)||(26708-26755)
[»] scaffold0024 (1 HSPs)
scaffold0024 (143-188)||(7209-7254)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 536 - 785
Target Start/End: Complemental strand, 290257 - 290012
Alignment:
Q  536 taataacttttgaaatcatatcaaatatagtacatcaattcatttcttcattgttacttcctctgaaaaagaaaaatatactagttacgtggctcaatcg 635  Q
    |||||||||||||||| ||||||||||||   || ||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  290257 taataacttttgaaataatatcaaatata---caacaattcaattcttcatcgttccttcctctgaaaaa-aaaaatatactagttacgtggctcaatcg 290162  T
Q  636 ccgtttagcttctctcctcttgcgttcatacttcctccttctcgccttcctccaccgtcagcaatggccggagacgcaaaacctcttcaatcattagatt 735  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  290161 ccgtttagcttctctcctcttgcgttcatacttcctccttctcgccttcctccaccgtcagcaatggccggagacgcaaaacctcttcaatcattagatt 290062  T
Q  736 caaacgcagaaacaactaatccgtaaatttctttctacttcatctcactc 785  Q
    |||||||||||||||||||||||||| |||||||||||||| || |||||    
T  290061 caaacgcagaaacaactaatccgtaagtttctttctacttcttcacactc 290012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 296 - 497
Target Start/End: Complemental strand, 290802 - 290596
Alignment:
Q  296 aacttaccttgagacaaaataggaggaaaaattcatagcaagcacaacgtacaaacacctttttattttaataaataata------ataagggaaatgtt 389  Q
    ||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||      |||| || ||||||    
T  290802 aacttaccttgagacaaagcaggaggaaaaattcatagcaagcgcaacgtgcaaacacctttttattttaataaataataataataataaagggaatgtt 290703  T
Q  390 aaccagttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgacattttaaaa-aataattatttaa 487  Q
    |   ||||||| ||  |||||||||||||||||||||||||||||||||   ||| || ||||||||||||||||||||||||||| |||||||| ||||    
T  290702 a---agttaagaacgttaaataataacttttcattgaagtttgtgtaatcagtgcattgtaaattgaaaactttgacattttaaaagaataattacttaa 290606  T
Q  488 tttagcataa 497  Q
    ||||| ||||    
T  290605 tttaggataa 290596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 51590560 - 51590434
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||||| || || ||||||||||||||||||||||||||||||  | |||||||||||   |||||||||| |||||||| ||||||||||||||    
T  51590560 tataagaaaaagttgaccttttagattcattgtgtaagtgatgtatctagtctatatttataa---caagatacattaattattctatgaaccaaaaaag 51590464  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    | |||||||| |||||||||||||||||||    
T  51590463 tcaattgttttttataataaggaccggagg 51590434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 13321844 - 13321718
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| | |||||||||||||| ||||||||||||||||  | |||||||||||   |||||||||| |||||||  || |||||||||||    
T  13321844 tataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataa---caagatacattaattattttataaaccaaaaaag 13321748  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| ||||||||| ||||||    
T  13321747 ttaattgtttcttgtaataaggatcggagg 13321718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 19998524 - 19998415
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    |||||||||||||||||||||||||||||||  | |||||||   | ||||||||| || ||||| ||||||||   ||||||| ||  |||||||||||    
T  19998524 tttttagattcattgtgtaagtgatgtatctagtctatattt---acaacaagatatattaattactcaatgaatataaaaagtcaaaagtttcttataa 19998428  T
Q  190 taaggaccggagg 202  Q
    |||||||||||||    
T  19998427 taaggaccggagg 19998415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 45977159 - 45977093
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    ||||||||||  ||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  45977159 agatacatcacctatacaataaaccaaaaaagttaattgtttcttataataaggaccggaggtaata 45977093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 18038818 - 18038698
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| |||||||||||||||||| ||||||||||||||  | || ||||   ||||| |||||||||| |||  ||||||||| ||||||    
T  18038818 tataaaaaacatttgactttttagattcattgtttaagtgatgtatctaatctacattt---ataacgagatacatcacttaagcaatgaacctaaaaag 18038722  T
Q  173 ttaattgtttcttataataaggac 196  Q
    | || | |||||||||||||||||    
T  18038721 tcaaatatttcttataataaggac 18038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 48565657 - 48565541
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||||| |||||||||||  ||||||||||| ||||||||| |  | |||||||||||   |||||||| | |||||||| |||||||||||||     
T  48565657 tataagaaaaagttaactttttaagttcattgtgtaggtgatgtatttagtctatatttataa---caagatactttaattattctatgaaccaaaaaaa 48565561  T
Q  173 ttaattgtttcttataataa 192  Q
    | |||| |||||||||||||    
T  48565560 tcaattatttcttataataa 48565541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 22182798 - 22182909
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||||||||| ||||||||||||||||||||     ||||||||||   | |||| ||| |||||| ||||||||  ||||||| ||||||| |||||    
T  22182798 actttttagatttattgtgtaagtgatgtatctagcccatatttataa---cgagatgcattaattatccaatgaacttaaaaagtcaattgttgcttat 22182894  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  22182895 aataaggaccggagg 22182909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 25238652 - 25238717
Alignment:
Q  137 aacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||| |||||||| ||||||| ||||||| |||||||| ||||||||||||| |||||    
T  25238652 aacaagatacattaattattctatgaacctaaaaagtcaattgttttttataataaggacaggagg 25238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 15699577 - 15699468
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||| || ||||| ||||||||||||||  | |||||||| ||   |||||||||| ||||| |||||||| | ||||| | ||  |||||||||||    
T  15699577 tttttaggtttattgtataagtgatgtatctagtctatatttacaa---caagatacattaattactcaatgaatctaaaaaatcaaaagtttcttataa 15699481  T
Q  190 taaggaccggagg 202  Q
    |||||||||||||    
T  15699480 taaggaccggagg 15699468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 49944901 - 49944839
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||||||||||||||||||||| | |||||||||| | ||||||||||  |||||||||    
T  49944901 acaagatacatcaattattcaatgaatctaaaaagttaaatttttcttataaataggaccgga 49944839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 47678319 - 47678251
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaataattt 211  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   ||||||||||| | ||||||    
T  47678319 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtaattt 47678251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 201
Target Start/End: Original strand, 52030886 - 52031004
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||||| || | ||||||| ||||| |||||||||||||||||  ||||||||||||||   ||||||||| |||       |||| ||||||||    
T  52030886 tataagaaaaaattgattttttagtttcatcgtgtaagtgatgtatctaatttatatttataat---aagatacattaat-------tgaatcaaaaaag 52030975  T
Q  173 ttaattgtttcttataataaggaccggag 201  Q
    |||||||||| || |||||||||| ||||    
T  52030976 ttaattgttttttgtaataaggacgggag 52031004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 203 - 285
Target Start/End: Complemental strand, 291000 - 290917
Alignment:
Q  203 aaataatttaaatagg-gttttgttaacgagtatcccgaagactccttaaacatgctaaataaaataattattctttcaaaatt 285  Q
    |||||||||||||| | ||||| ||||||||| | ||| | |||| |||| ||||||||||| | |||||||||||||||||||    
T  291000 aaataatttaaataagagttttattaacgagtgttccggacactctttaagcatgctaaatagagtaattattctttcaaaatt 290917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 26924298 - 26924357
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||||  |||||||||||    
T  26924298 atacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagg 26924357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 27687884 - 27687978
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    |||||| ||||||||||||||||  | |||||||| |||||   ||||||| |||||||| || |||  |||||||||||| |||||||||| |||||    
T  27687884 ttcattatgtaagtgatgtatctagtctatatttacaataa---gatacattaattattctataaacttaaaaagttaattttttcttataacaagga 27687978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 38738061 - 38738014
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  38738061 tataagaaaaatttaactttttagattcattgagtaattgatgtatct 38738014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 38040356 - 38040422
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    ||||||||||||||||| |||||||| | ||||||| || | ||||||||||  |||||||||||||    
T  38040356 acaagatacatcaattaatcaatgaatctaaaaagtcaaatttttcttataaataggaccggaggaa 38040422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 34174949 - 34174892
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||| |||  ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  34174949 atacatcacttacacaatgaacctaaaaagtcaattgtttcttataataaggatcgga 34174892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 34662766 - 34662811
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  34662766 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 34662811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 38738011 - 38738072
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgg 199  Q
    ||||||||||||||||| |||||||| | |||||||||| | ||||||||||  ||||||||    
T  38738011 acaagatacatcaattactcaatgaatctaaaaagttaaatttttcttataaataggaccgg 38738072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 6340655 - 6340715
Alignment:
Q  147 atcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||| ||||| |||||||| |||||||||||| || |||||||||| ||| ||||||||||    
T  6340655 atcatttattgaatgaacctaaaaagttaatttttgcttataataatgacaggaggaaata 6340715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 12175528 - 12175572
Alignment:
Q  135 ataacaagatacatcaattattcaatgaaccaaaaaagttaattg 179  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||    
T  12175528 ataacaagatacattaattgttcaatgaacctaaaaagttaattg 12175572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 26760236 - 26760172
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||||||| |||||||||||| ||||||||| || ||||||||||||  |||||| |||| ||||    
T  26760236 atacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaataggacccgagggaata 26760172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 449 - 492
Target Start/End: Complemental strand, 31043055 - 31043011
Alignment:
Q  449 aaattgaaaactttgaca-ttttaaaaaataattatttaatttag 492  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  31043055 aaattgaaaactttgacatttttaaaaaataattacttaatttag 31043011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 31050365 - 31050254
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| || |||||||||||||||||| |  | |||||||   | ||||| |||||| |||||  ||||||| | ||||||| ||  |||||||||    
T  31050365 actttttaggtttattgtgtaagtgatgtatttagtctatattt---acaacaaaatacattaattacacaatgaatctaaaaagtcaaaagtttcttat 31050269  T
Q  188 aataaggaccggagg 202  Q
    |||||||||| ||||    
T  31050268 aataaggaccagagg 31050254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 449 - 496
Target Start/End: Original strand, 33791791 - 33791839
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaatttagcata 496  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  33791791 aaattgaaaaatttgacattttaaaagaataattacttaatttagcata 33791839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 43850982 - 43851088
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaacc--aaaaaagttaattgtttctt 185  Q
    |||||||||||| ||| ||||||||||||||||  | |||||||   ||||||||||| || ||||||| |||||| |   ||||||| ||  |||||||    
T  43850982 actttttagatttattatgtaagtgatgtatctaatatatattt---ataacaagatatattaattatttaatgaatctataaaaagtaaaaagtttctt 43851078  T
Q  186 ataataagga 195  Q
    ||||||||||    
T  43851079 ataataagga 43851088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 44939129 - 44939065
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||||||| |||| |||||||  |||||||| || ||||||||||||  ||||||||||||||||    
T  44939129 atacatcatttatacaatgaataaaaaaagtcaaatgtttcttataaataggaccggaggaaata 44939065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 449 - 492
Target Start/End: Complemental strand, 48947258 - 48947214
Alignment:
Q  449 aaattgaaaactttgaca-ttttaaaaaataattatttaatttag 492  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  48947258 aaattgaaaactttgacatttttaaaaaataattacttaatttag 48947214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 519963 - 519916
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    ||||| |||| ||||||||||||||||||||| |||| ||||||||||    
T  519963 tataagaaaattttaactttttagattcattgagtaattgatgtatct 519916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 491
Target Start/End: Complemental strand, 1656490 - 1656447
Alignment:
Q  449 aaattgaaaactttgacatttt-aaaaaataattatttaattta 491  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  1656490 aaattgaaaattttgacatttttaaaaaataattatttaattta 1656447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 13320366 - 13320307
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||  |||| ||| |||||| ||||||||||||||||||||| ||||||||    
T  13320366 atacatcatttacacaataaacaaaaaaaattaattgtttcttataataagaaccggagg 13320307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 19998494 - 19998553
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||||| |||  ||||||| | ||||| | ||||||||||||||||||||||||||    
T  19998494 agatacatcacttacacaatgaatctaaaaattcaattgtttcttataataaggaccgga 19998553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 35543455 - 35543502
Alignment:
Q  449 aaattgaaaactttgacatttt-aaaaaataattatttaatttagcat 495  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  35543455 aaattgaaaactttgatattttaaaaaaataattacttaatttagcat 35543502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 39973946 - 39973899
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaatttagcat 495  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  39973946 aaattgaaaactttaacattttaaaagaataattacttaatttagcat 39973899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 43929409 - 43929350
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| |||| |||||| ||||||||| ||||||||||||||   |||||||||||    
T  43929409 atacatcaactatttaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 43929350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 44224352 - 44224411
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||||| || | ||||||||||||||| |||||| ||| ||||||||||| |||||    
T  44224352 agatacatcacttgtacaatgaaccaaaaaaattaattattttttataataagggccgga 44224411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 45849003 - 45848956
Alignment:
Q  142 gatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||||||||||| ||||||   |||||||||||||||||||||||    
T  45849003 gatacatcaattattaaatgaatataaaaagttaattgtttcttataa 45848956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 49944851 - 49944898
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    ||||| ||||||||||||||||||||||||||  ||| ||||||||||    
T  49944851 tataagaaaaatttaactttttagattcattgaataattgatgtatct 49944898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 25021294 - 25021248
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||||||||||||||||| | ||||||| | |||||||||||||    
T  25021294 atacatcaattattcaatgaatctaaaaagtcatttgtttcttataa 25021248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 43929431 - 43929489
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||| | ||||||||||  |||||||||||    
T  43929431 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggagg 43929489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 52279277 - 52279378
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    ||||||||||||||||||||||   | |||||||| |||||   |||| || |||||||  ||||| | ||||||| || | |||||||||||||||| |    
T  52279277 ttcattgtgtaagtgatgtatcaagtctatatttacaataa---gatatattaattattatatgaatctaaaaagtcaactttttcttataataaggatc 52279373  T
Q  198 ggagg 202  Q
    |||||    
T  52279374 ggagg 52279378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 5966958 - 5967015
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccg 198  Q
    ||||||||||||||  |||| |||| ||||| | | ||||||||||||||||||||||    
T  5966958 agatacatcaattacacaataaacctaaaaaataatttgtttcttataataaggaccg 5967015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 15699547 - 15699608
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||| |||| |||| ||||| | ||||||||| |||||||||||| |||||    
T  15699547 agatacatcacttatacaataaacctaaaaattcaattgtttcatataataaggacgggagg 15699608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 18038771 - 18038832
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||| | ||||||| || ||||| |||||||||||||||||||    
T  18038771 agatacatcacttaaacaatgaatctaaaaagtcaaatgttttttataataaggaccggagg 18038832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 22182830 - 22182769
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  |||| || | ||||||| ||||||| ||||||||||||||||||||    
T  22182830 agatacatcacttacacaataaatctaaaaagtcaattgttacttataataaggaccggagg 22182769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 29438243 - 29438171
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagt 173  Q
    |||||||||||||||||||||||  | |||||||  |||   ||||||||| |||||||| ||||||| |||||||    
T  29438243 ttcattgtgtaagtgatgtatctagtctatattttcaat---aagatacattaattattctatgaacctaaaaagt 29438171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 29438221 - 29438282
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  |||||||| |||||||| ||||||||||||||| || || ||||||    
T  29438221 agatacatcacttacacaatgaactaaaaaagtcaattgtttcttataacaatgagcggagg 29438282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 29892213 - 29892274
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||| |||||||||| |||||| | ||||||| ||||||||| |||||  |||||||||||    
T  29892213 agatatatcaattattgaatgaatctaaaaagtcaattgtttcctataaataggaccggagg 29892274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 31050335 - 31050388
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggac 196  Q
    |||||||| |||  |||| |||| ||||||| ||||||||||||||||||||||    
T  31050335 atacatcacttacacaataaacctaaaaagtcaattgtttcttataataaggac 31050388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 37178995 - 37179056
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||||| |||| |||| || ||||||||| || ||||||||||||| ||| |||||||||    
T  37178995 atacatcatttatacaataaatcaaaaaagtcaaatgtttcttataattagggccggaggaa 37179056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 38590190 - 38590149
Alignment:
Q  79 aaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    ||||| |||||||||||||||||||| |||| ||||||||||    
T  38590190 aaaaaattaactttttagattcattgagtaattgatgtatct 38590149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 47844622 - 47844663
Alignment:
Q  147 atcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||    
T  47844622 atcaactattcaatgaatcaaaaaagtaaattgtttcttata 47844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 48565626 - 48565671
Alignment:
Q  157 caatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||  |||||||||| | |||||||||||||||||||||||    
T  48565626 caatgaacttaaaaagttaactttttcttataataaggaccggagg 48565671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 50155383 - 50155444
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||||||||| |||||||| | ||||||| || | ||||||||||  |||||||||||||    
T  50155383 atacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaa 50155444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 34745387 - 34745261
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| | |||||||||||||| ||||||||||||||||  | |||||||||||   |||||||||| |||||||| ||||||||||||||    
T  34745387 tataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataa---caagatacattaattattctatgaaccaaaaaag 34745291  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    | ||||||||||||||||||||||||||||    
T  34745290 tcaattgtttcttataataaggaccggagg 34745261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 43292698 - 43292572
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||| ||||||||||||||||  | |||||||||||   |||||||||| |||||||| ||||||||||||||    
T  43292698 tataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataa---caagatacattaattattctatgaaccaaaaaag 43292602  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    | ||||||||||||||||||||||||||||    
T  43292601 tcaattgtttcttataataaggaccggagg 43292572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 43932082 - 43932193
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| ||||||||  || ||||||||||  | |||||||||||   |||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  43932082 actttttaggttcattgtacaaatgatgtatctaatctatatttataa---caagatacattaattattcaatgaatctaaaaagtcaattgtttcttat 43932178  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  43932179 aataaggaccggagg 43932193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 29690519 - 29690582
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29690519 agatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 29690582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 35583966 - 35584027
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35583966 agatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 35584027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 29690554 - 29690446
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||| ||||||||||||||  | ||||||||||||||   ||||||| |||||||| ||||||| ||||||| | || |||||    
T  29690554 ttaacttttttggttcattgtataagtgatgtatctagtctatatttataataa---gatacattaattattctatgaacctaaaaagtcagttttttct 29690458  T
Q  185 tataataaggac 196  Q
    ||||||||||||    
T  29690457 tataataaggac 29690446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 38494369 - 38494253
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||||| || | ||||||| || |||||||||||| |||||||  |||||||||||||   |||||||||| |||||||| |||||| |||||||    
T  38494369 tataagaaaaaattgattttttaggtttattgtgtaagtggtgtatctaatttatatttataa---caagatacattaattattctatgaacaaaaaaag 38494273  T
Q  173 ttaattgtttcttataataa 192  Q
    | |||| |||||||||||||    
T  38494272 tcaattatttcttataataa 38494253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 13831938 - 13831883
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccg 198  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  13831938 atacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccg 13831883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 13831905 - 13832019
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||| |||||||||||| |  | |||||||| |||||   ||||||| |||||||| ||||||| ||||||| || | |||||    
T  13831905 ttaacttttttggttcattgtataagtgatgtatatagtctatatttacaataa---gatacattaattattctatgaacctaaaaagtcaactttttct 13832001  T
Q  185 tataataaggaccggagg 202  Q
    ||||||||||||||||||    
T  13832002 tataataaggaccggagg 13832019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 34604864 - 34604925
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  34604864 agatacatcacttatacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagg 34604925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 43409867 - 43409978
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||||| ||||| ||||||||  | |||||||||||   | || ||||| |||||||||||||||| ||||||| | ||||| || ||    
T  43409867 actttttaggttcattgtataagtaatgtatctagtctatatttataa---cgaggtacattaattattcaatgaaccgaaaaagtcatttgttgctaat 43409963  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  43409964 aataaggaccggagg 43409978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 45372820 - 45372709
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||| |||||| ||||||||||||||||||  | |||||||  |||||   ||||||| |||||||| ||||||| ||||||| || | ||||||||    
T  45372820 acttttttgattcaatgtgtaagtgatgtatctagtctatattttcaataa---gatacattaattattctatgaacctaaaaagtcaactttttcttat 45372724  T
Q  188 aataaggaccggagg 202  Q
    | |||||||||||||    
T  45372723 attaaggaccggagg 45372709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 7548560 - 7548501
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  7548560 atacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggaccggagg 7548501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 9633211 - 9633089
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||  ||||||||||||   ||||||||  | |||||||||||   |||||||||| |||||| ||||||| | |||| |    
T  9633211 tataagaaacatttgactttttaagttcattgtgtaaacaatgtatctagtctatatttataa---caagatacattaattatacaatgaatctaaaacg 9633115  T
Q  173 ttaattgtttcttataataaggaccg 198  Q
    | ||||||||||||||||||||||||    
T  9633114 tcaattgtttcttataataaggaccg 9633089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 38298534 - 38298632
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||  |||||||||||||||||||||||    |||||||   ||||| |||||||| |||||||||||||||| ||||| | |||||||||||||    
T  38298534 actttttaagttcattgtgtaagtgatgtatctagcctatattt---ataacgagatacattaattattcaatgaacctaaaaaatcaattgtttcttat 38298630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 34604886 - 34604785
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||| ||||||||||||||  | |||||||| |||||   ||||||| | |||||| ||||||| ||||||| || | ||||||||||||||||||    
T  34604886 ttcattgtataagtgatgtatctagtctatatttacaataa---gatacattatttattctatgaacctaaaaagtcaactttttcttataataaggacc 34604790  T
Q  198 ggagg 202  Q
    |||||    
T  34604789 ggagg 34604785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 16448919 - 16448791
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||  | || |   |||  ||| | ||| |||| |||| ||||||| ||||||||    
T  16448919 tataagaaaaatttaactttttagattcattgagtaattgatgtatcttatataga---atataaaccaaatatatcatttatgcaatgaatcaaaaaag 16448823  T
Q  173 ttaattgtttcttataataaggaccggaggaa 204  Q
    | || ||||||||||||  |||||||||||||    
T  16448822 tcaaatgtttcttataaataggaccggaggaa 16448791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 43932114 - 43932053
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| || | ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  43932114 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 43932053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 35584001 - 35583887
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||| ||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||||| |||| || |  | |||||    
T  35584001 ttaacttttttggttcattgtataagtgatgtatctaatctatatttacaataa---gatacattaattattctatgaacctaaaaggtcatatttttct 35583905  T
Q  185 tataataaggaccggagg 202  Q
    |||||||||||| |||||    
T  35583904 tataataaggactggagg 35583887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 35794603 - 35794670
Alignment:
Q  135 ataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||||| ||||| |||||||| | ||||||| ||  ||||||||||||||||||||||||    
T  35794603 ataacaagatacattaattactcaatgaatctaaaaagtaaaaagtttcttataataaggaccggagg 35794670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 5031532 - 5031457
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaataatttaa 213  Q
    ||||||||||||||||| | ||||||   |||||||||| | ||||||||||  ||||||||||||| ||||||||    
T  5031532 acaagatacatcaattacttaatgaatttaaaaagttaaatttttcttataaataggaccggaggaagtaatttaa 5031457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 6899504 - 6899563
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  6899504 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 6899563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 12958860 - 12958919
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  12958860 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 12958919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 22429619 - 22429678
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  22429619 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 22429678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 44796426 - 44796485
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  44796426 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 44796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 9550144 - 9550245
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    |||||| |||||||| |||||||||||||||  | ||||||||| |   | |||||||| | ||||||||| ||   ||||||| |||||||||||||||    
T  9550144 tttttaaattcattgggtaagtgatgtatctagtctatatttatta---cgagatacattagttattcaataaatttaaaaagtcaattgtttcttataa 9550240  T
Q  190 taagg 194  Q
    |||||    
T  9550241 taagg 9550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 491
Target Start/End: Original strand, 2376726 - 2376823
Alignment:
Q  396 ttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgacattttaaaa-aataattatttaattta 491  Q
    ||||||||| |||||| |||||||| ||  |||||| | ||||| || | ||| |||||||||||||||| ||||| ||| |||||||||||||||||    
T  2376726 ttaaggaccttaaatagtaactttttatgaaagtttatataattaatacgttagaaattgaaaactttgatatttttaaagaataattatttaattta 2376823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 24599782 - 24599674
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    |||||||||||||||| ||| ||||||||||    ||||||||||||    | |||||| | ||||||||||||   ||||||| |||| ||||||||||    
T  24599782 tttttagattcattgtataactgatgtatctaacctatatttataat---gaaatacattatttattcaatgaatttaaaaagtcaattatttcttataa 24599686  T
Q  190 taaggaccggag 201  Q
    ||| ||||||||    
T  24599685 taaagaccggag 24599674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 35011296 - 35011341
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  35011296 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 35011341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 43409899 - 43409838
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| | |||| ||||||||| ||||||| ||||| | ||||||||||||||||||||    
T  43409899 agatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagg 43409838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 44579923 - 44580031
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| |||| ||||| ||||| || |||||  | |||||||| |||||   ||||||| |||||||| ||||||  ||||||| || | |||||    
T  44579923 ttaacttttttgatttattgtataagtaatatatctagtctatatttacaataa---gatacattaattattctatgaacttaaaaagtcaactttttct 44580019  T
Q  185 tataataaggac 196  Q
    ||||||||||||    
T  44580020 tataataaggac 44580031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 45180122 - 45180179
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccg 198  Q
    |||||||||| |||  ||||||||||||||||| |||||||| ||||||||| |||||    
T  45180122 agatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataaagaccg 45180179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 45372788 - 45372849
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  || |||| ||||||||| ||||||| ||||||||||||||||||||    
T  45372788 agatacatcacttacacattgaatcaaaaaagtcaattgttacttataataaggaccggagg 45372849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 7548527 - 7548642
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaacc-aaaaaagttaattgtttc 183  Q
    |||| ||||| | ||||||||||||||||||||| |    |||||||| |||   ||||| ||| |||||||| ||||||| |||||| | || | ||||    
T  7548527 ttaatttttttggttcattgtgtaagtgatgtatttagactatatttacaat---aagatgcattaattattctatgaacctaaaaaaatcaactttttc 7548623  T
Q  184 ttataataaggaccggagg 202  Q
    |||||||||||||||||||    
T  7548624 ttataataaggaccggagg 7548642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 30734586 - 30734526
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccg 198  Q
    |||||||||||||||||  ||||||| | ||||| | | ||||||||||||||||||||||    
T  30734586 acaagatacatcaattacacaatgaatctaaaaaataatttgtttcttataataaggaccg 30734526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 1876534 - 1876581
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaatttagcat 495  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  1876534 aaattgaaaattttgacattttaaaagaataattacttaatttagcat 1876581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 24915252 - 24915311
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||||||||||| |||||| | |||||||||||| |||| |||||  |||||||||    
T  24915252 agatacatcaattatttaatgaatctaaaaagttaattttttcatataaataggaccgga 24915311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 32575259 - 32575318
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||||||||||||  |||||||| |||||||| |||||   |||||||||||    
T  32575259 atacatcaattattcaatgaataaaaaaagtaaattgttttttatatataggaccggagg 32575318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 36366088 - 36366029
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| |||| |||||| ||||||||| ||||||||||||||   |||||||||||    
T  36366088 atacatcaactattgaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 36366029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 491
Target Start/End: Original strand, 44220762 - 44220805
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaattta 491  Q
    |||||||||||||||||||||||||| |||||||| ||||||||    
T  44220762 aaattgaaaactttgacattttaaaagaataattacttaattta 44220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 40645728 - 40645809
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattc 157  Q
    ||||| ||| |||| ||||||||  |||||| ||||||||||||||||  | |||||||   |||||||||||||| ||||||||    
T  40645728 tataagaaacatttgactttttaagttcattatgtaagtgatgtatctagtctatattt---ataacaagatacattaattattc 40645809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 8242192 - 8242151
Alignment:
Q  152 ttattcaatgaaccaaaaaagttaattgtttcttataataag 193  Q
    |||| ||||||||||||||||| || ||||||||||||||||    
T  8242192 ttatacaatgaaccaaaaaagtcaactgtttcttataataag 8242151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 10839825 - 10839760
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaataat 209  Q
    ||||| |||||||||||||| | ||||||| |||| ||||||||||  ||||| ||||||| ||||    
T  10839825 tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggactggaggaagtaat 10839760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 16448871 - 16448920
Alignment:
Q  140 aagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||||||||||| |||||||| | |||||||||| | ||||||||||    
T  16448871 aagatacatcaattactcaatgaatctaaaaagttaaatttttcttataa 16448920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 4e-31; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 53703842 - 53703734
Alignment:
Q  91 ttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataat 190  Q
    |||||| |||||||||||||||||||||||  | |||||||||||   |||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  53703842 ttttaggttcattgtgtaagtgatgtatctagtctatatttataa---caagatacattaattattctatgaaccaaaaaagtcaattgtttcttataat 53703746  T
Q  191 aaggaccggagg 202  Q
    ||||||||||||    
T  53703745 aaggaccggagg 53703734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 31376193 - 31376319
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||| ||||||||||||||||  | ||||||||||| ||   ||||||| |||||||| ||||||||||||||    
T  31376193 tataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataagaa---gatacattaattattctatgaaccaaaaaag 31376289  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    | ||||||||||| ||||||||||||||||    
T  31376290 tcaattgtttcttgtaataaggaccggagg 31376319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 39616929 - 39617055
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| |||||| || |||||| ||||||||||||||||  | |||||||||||   |||||||||| |||||||| ||||||||||||||    
T  39616929 tataagaaacatttgacttttaaggttcattatgtaagtgatgtatctagtctatatttataa---caagatacattaattattctatgaaccaaaaaag 39617025  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    | ||||||||||| ||||||||||||||||    
T  39617026 tcaattgtttcttgtaataaggaccggagg 39617055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 44118211 - 44118329
Alignment:
Q  83 atttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgttt 182  Q
    |||| |||||||||||||||||||||| ||||||||||  | |||||||||||   ||| |||||| ||||||  |||||| | ||||||| ||||||||    
T  44118211 atttgactttttagattcattgtgtaaatgatgtatctagtctatatttataa---caatatacattaattatataatgaatctaaaaagtcaattgttt 44118307  T
Q  183 cttataataaggaccggaggaa 204  Q
    ||||||||||||||| ||||||    
T  44118308 cttataataaggaccagaggaa 44118329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 19227325 - 19227452
Alignment:
Q  72 gtataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaa 171  Q
    |||||| ||| |||| ||||||||  || ||| ||||| ||||||||||  | |||||||||||   ||||||| || |||||||| |||||||||||||    
T  19227325 gtataagaaacatttgactttttaagtttattatgtaaatgatgtatctagtctatatttataa---caagataaattaattattctatgaaccaaaaaa 19227421  T
Q  172 gttaattgtttcttataataaggaccggagg 202  Q
     | ||||||||||||||||||||||||||||    
T  19227422 atcaattgtttcttataataaggaccggagg 19227452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 45113777 - 45113878
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||||| ||||||| || | ||||||||||||||||||    
T  45113777 ttcattgtgtaagtgatgtatctagtctatatttacaataa---gatacattaattattctatgaacctaaaaagtcaactttttcttataataaggacc 45113873  T
Q  198 ggagg 202  Q
    |||||    
T  45113874 ggagg 45113878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 43901667 - 43901725
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  43901667 tacatcatttacacaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 43901725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 27302109 - 27302225
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||| ||||||||||||||  | |||||||| ||| |   ||||||| |||||||| ||||||| ||||||| || | |||||    
T  27302109 ttaacttttttggttcattgtataagtgatgtatctagtctatatttacaatta---gatacattaattattctatgaacctaaaaagtcaactttttct 27302205  T
Q  185 tataataaggaccggaggaa 204  Q
    |||||||| |||||||||||    
T  27302206 tataataaagaccggaggaa 27302225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 2544574 - 2544489
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagtta 175  Q
    |||||||||||||||||| |||||||||||| |  | |||| ||   ||||||||||||||||||||||||||||||| |||||||||    
T  2544574 actttttagattcattgtataagtgatgtatttggtctataattt--ataacaagatacatcaattattcaatgaacctaaaaagtta 2544489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 27302144 - 27302084
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggag 201  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  27302144 agatacatcacttatacaatgaaccaaaaaagttaattctttcttataataaagaccggag 27302084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 36191589 - 36191485
Alignment:
Q  91 ttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatca---attattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||| |||||| ||||||||||||||||  | ||||| |   |||||||||||||| |   ||||||| ||||||||||||||| |||||||||||||    
T  36191589 ttttaggttcattatgtaagtgatgtatctagtctatatat---ataacaagatacattaatcattattctatgaaccaaaaaagtcaattgtttcttat 36191493  T
Q  188 aataagga 195  Q
    ||||||||    
T  36191492 aataagga 36191485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 53284399 - 53284462
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||||||| |||| |||| |||||||||| | ||||||||||||||||||||||||||||||    
T  53284399 agatacatcacttatacaataaaccaaaaaaatcaattgtttcttataataaggaccggaggaa 53284462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 2544491 - 2544441
Alignment:
Q  152 ttattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2544491 ttattcaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 2544441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 16123839 - 16123896
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccg 198  Q
    |||||||| | |||| |||||||||||||||||||||||||| |||||||||||||||    
T  16123839 agatacattacttatacaatgaaccaaaaaagttaattgttttttataataaggaccg 16123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 42896207 - 42896146
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||||||||||||| ||||||| ||||| |||||||||||| |||||||||    
T  42896207 agatacatcagttattcaatgaacctaaaaagtgaattgcttcttataataaagaccggagg 42896146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 21944355 - 21944295
Alignment:
Q  140 aagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    ||||||||| |||||||| ||||||| ||||||| |||| |||||||||||||||||||||    
T  21944355 aagatacattaattattctatgaacctaaaaagtcaattttttcttataataaggaccgga 21944295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 48643637 - 48643748
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| || || |||||||| ||||||||  | |||||||||||   | | |||||| |||||||||||||| | ||||||| ||||||||||| |    
T  48643637 actttttaggttaatcgtgtaagtaatgtatctagtctatatttataa---cgaaatacattaattattcaatgaatctaaaaagtcaattgtttcttgt 48643733  T
Q  188 aataaggaccggagg 202  Q
    ||||||||| |||||    
T  48643734 aataaggactggagg 48643748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 8769257 - 8769171
Alignment:
Q  80 aaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaa 169  Q
    |||| |||||||||||  |||||||||||||||||||||||  | |||||||   |||||||||||||| ||| |||| |||||||||||    
T  8769257 aaaagttaactttttaagttcattgtgtaagtgatgtatctaatctatattt---ataacaagatacattaatcattctatgaaccaaaa 8769171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 12140199 - 12140152
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaatttagcat 495  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  12140199 aaattgaaaactttgacattttaaaagaataattatttaatttagcat 12140152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 19899718 - 19899626
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataa 192  Q
    |||||||||||| ||||||||||  | ||||| |||| ||||||||| | | |||||||||||||||| ||||| | ||||||||||||||||||    
T  19899718 ttcattgtgtaaatgatgtatctagtctatatatata-taacaagatgcgttaattattcaatgaacctaaaaa-tcaattgtttcttataataa 19899626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 42896227 - 42896281
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||| |||||||||||||  ||||||| |||||||||||||||||||||||    
T  42896227 atacatcagttattcaatgaacgtaaaaagtgaattgtttcttataataaggacc 42896281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 50100259 - 50100206
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagg 194  Q
    |||||||||| |||| |||||||| |||||||| ||||||||||||||||||||    
T  50100259 agatacatcacttatacaatgaactaaaaaagtcaattgtttcttataataagg 50100206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 48346483 - 48346594
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||  || ||| ||||||||||||||||  | |||||||||||   |||||||||| ||||| | |||||| | ||||||| ||  |||||||||    
T  48346483 actttttaagtttattatgtaagtgatgtatctagtctatatttataa---caagatacattaattacttaatgaatctaaaaagtaaaaagtttcttat 48346579  T
Q  188 aataaggaccggagg 202  Q
    |||||||| ||||||    
T  48346580 aataaggatcggagg 48346594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 2544544 - 2544603
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| ||||||| | ||||||| ||||||||||| ||||||||||||||||    
T  2544544 atacatcacttatacaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagg 2544603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 50100237 - 50100339
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaatt-gtttcttataataaggac 196  Q
    |||||||| ||||||||||||||  | ||||||||||||   ||||||| | |||| ||| ||||| |||| |||||||||  ||| |||||||||||||    
T  50100237 ttcattgtataagtgatgtatctagtctatatttataat---aagatacgttaatttttctatgaatcaaacaagttaattatttttttataataaggac 50100333  T
Q  197 cggagg 202  Q
    ||||||    
T  50100334 cggagg 50100339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 51517042 - 51517101
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| ||||||||||||||||| || ||||||||||||  |||||||||||    
T  51517042 atacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggagg 51517101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 5177851 - 5177909
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  5177851 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 5177909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 8764334 - 8764269
Alignment:
Q  101 attgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaa 169  Q
    ||||||||||||||||||||  | |||||||||||   |||||||||| |||||||| |||||||||||    
T  8764334 attgtgtaagtgatgtatctaatctatatttataa---caagatacattaattattctatgaaccaaaa 8764269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 25317914 - 25317812
Alignment:
Q  395 gttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgacattttaaaa-aataattatttaatttag 492  Q
    |||||||||| |||||| ||| |||| ||  ||||||||||||| ||||| ||  |||||||||||||| | ||||||||| |||||||| || ||||||    
T  25317914 gttaaggaccttaaatagtaaatttttataaaagtttgtgtaatcgatgcattggaaattgaaaacttttaaattttaaaagaataattactttatttag 25317815  T
Q  493 cat 495  Q
    |||    
T  25317814 cat 25317812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 28406553 - 28406611
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||| |||||||||||||||| ||||||| ||||||||||| |||  |||||||||||    
T  28406553 tacataaattattcaatgaacctaaaaagtcaattgtttcttgtaaataggaccggagg 28406611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 45113799 - 45113745
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    |||||||||| |||  ||||||||||||||| | |||||||||||||||||||||    
T  45113799 agatacatcacttacacaatgaaccaaaaaaatcaattgtttcttataataagga 45113745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 54087466 - 54087416
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    |||| ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  54087466 acaaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 54087416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 495
Target Start/End: Complemental strand, 14146208 - 14146107
Alignment:
Q  396 ttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgacattt-taaaaaataattatttaatttagc 493  Q
    ||||||||  |||||  ||| |||| || ||||||||||||||   ||| ||| |||||||||||||||||||||  |||||||||||| ||||||||||    
T  14146208 ttaaggactttaaatggtaaatttttatagaagtttgtgtaatcagtgcattagaaattgaaaactttgacatttaaaaaaaataattacttaatttagc 14146109  T
Q  494 at 495  Q
    ||    
T  14146108 at 14146107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 16123874 - 16123759
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||| ||||| ||||||||  | |||||||| |||||   |||| || |||||||  || |||| |||| || |||| |||||    
T  16123874 ttaacttttttggttcattgtataagtaatgtatctagtctatatttacaataa---gatatattaattattttataaacctaaaa-gtcaattttttct 16123779  T
Q  185 tataataaggaccggaggaa 204  Q
    ||||||||||||||||||||    
T  16123778 tataataaggaccggaggaa 16123759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 29457903 - 29457858
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  29457903 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 29457858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 31376240 - 31376179
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||   |||||||| ||||||| || |||||||||||||||||||||||||    
T  31376240 agatacatcacttacataatgaacctaaaaagtcaaatgtttcttataataaggaccggagg 31376179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 45746586 - 45746482
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||||| ||||| ||||||||||||| ||||  | |||||||||||   | ||||| || ||||||||||| || | ||||| | |||||||||||||    
T  45746586 actttttatattcaatgtgtaagtgatggatctagtctatatttataa---cgagatatattaattattcaataaatctaaaaaatcaattgtttcttat 45746490  T
Q  188 aataagga 195  Q
    | ||||||    
T  45746489 actaagga 45746482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 50660014 - 50659953
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||||||||| | |||||||||| |||||||||||| ||||    
T  50660014 agatacatcacttacacaatgaaccaaaaaaatcaattgtttctaataataaggaccagagg 50659953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 52864975 - 52865016
Alignment:
Q  79 aaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  52864975 aaaaatttaactttttagattcattgagtaattgatgtatct 52865016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 23537253 - 23537293
Alignment:
Q  167 aaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  23537253 aaaaagttaattgattcttataataaggaccggatgaaata 23537293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 43901699 - 43901592
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||||||| ||||||| ||  | |||||||  |||   ||||||||| |||||||| ||||||| ||||||| || | ||||     
T  43901699 ttaacttttttggttcattgtgtaaatgatgtacctagtctatattttcaat---aagatacattaattattctatgaacctaaaaagtcaactttttca 43901603  T
Q  185 tataataagga 195  Q
    |||||||||||    
T  43901602 tataataagga 43901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 19674644 - 19674593
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagg 194  Q
    ||||| ||||||||||||||||| ||||||| |||||| | |||||||||||    
T  19674644 atacaacaattattcaatgaacctaaaaagtgaattgtcttttataataagg 19674593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 21662971 - 21663030
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| ||||||| |||||||||||| ||||||||||||  | |||||||||    
T  21662971 atacatcatttatgcaatgaatcaaaaaagttaaatgtttcttataaataagaccggagg 21663030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 48643648 - 48643609
Alignment:
Q  162 aaccaaaaaagttaattgtttcttataataaggaccggag 201  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  48643648 aacctaaaaagtcaattgtttcttataataaggaccggag 48643609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 53441970 - 53441911
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| ||||||| ||||||||| || ||||||||||||  |||||||||||    
T  53441970 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagg 53441911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 9236152 - 9236082
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaa-ttgtttcttataataaggaccggaggaaataatt 210  Q
    |||||||||||||| |||||||| |||||||||||| || ||||||||||  |||| |||||  |||||||    
T  9236152 agatacatcaattactcaatgaatcaaaaaagttaacttttttcttataagtaggatcggagagaataatt 9236082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 19649642 - 19649600
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttctt 185  Q
    ||||||||||||||||||||| ||||||||| || ||||||||    
T  19649642 atacatcaattattcaatgaatcaaaaaagtcaaatgtttctt 19649600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 51980503 - 51980434
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaat 160  Q
    ||||||||  ||||||||||||||||| |||||  |||||||||   ||||| |||||||| |||||||||||    
T  51980503 actttttaacttcattgtgtaagtgatatatctagtttatattt---ataacgagatacattaattattcaat 51980434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 8769217 - 8769277
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||  |||||||||| | |||||||||||||||||||||||    
T  8769217 agatacatcacttacacaatgaacttaaaaagttaact-tttcttataataaggaccggagg 8769277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 27363196 - 27363296
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    |||||||||||| | ||||||||||||||||  | |||||||   |||||||||||| | ||||| | |||||| | |||||||  |  |||||||||||    
T  27363196 tttttagattcaatatgtaagtgatgtatctaatctatattt---ataacaagatacgttaattacttaatgaatctaaaaagtagaaagtttcttataa 27363292  T
Q  190 taag 193  Q
    ||||    
T  27363293 taag 27363296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 39616976 - 39616915
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||   ||||||||  |||||| || |||||||||||||||||||||||||    
T  39616976 agatacatcacttacataatgaaccttaaaagtcaaatgtttcttataataaggaccggagg 39616915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 491
Target Start/End: Complemental strand, 45758037 - 45757940
Alignment:
Q  396 ttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgaca-ttttaaaaaataattatttaattta 491  Q
    ||||||||| |||||||||  |||| ||  |||||||||||||   ||| || ||||||||||||||||||| ||||||| |||||||  ||||||||    
T  45758037 ttaaggaccttaaataatatttttttatgaaagtttgtgtaatcagtgcattgtaaattgaaaactttgacatttttaaagaataattgcttaattta 45757940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 50660020 - 50660081
Alignment:
Q  140 aagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggag 201  Q
    ||||||||| |||||||| || || | ||||||| || | ||||||||||||||||||||||    
T  50660020 aagatacattaattattctataaatctaaaaagtcaactttttcttataataaggaccggag 50660081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 45025724 - 45025599
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| | |||||||||||||| ||||||||||||||||  | |||||||||||   |||||||||| |||||||| |||||||||||||     
T  45025724 tataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataa---caagatacattaattattctatgaaccaaaaaaa 45025628  T
Q  173 ttaattgtttcttataataaggaccggag 201  Q
    | |||||||||||||||||||||||||||    
T  45025627 tcaattgtttcttataataaggaccggag 45025599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 24164646 - 24164515
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||| ||||||||||||||||  | ||||||| |||   |||||||||| |||||||| |||||||||||||     
T  24164646 tataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttctaa---caagatacattaattattctatgaaccaaaaaaa 24164550  T
Q  173 ttaattgtttcttataataaggaccggaggaaata 207  Q
    | |||||||||||||||||||||||||||| ||||    
T  24164549 tcaattgtttcttataataaggaccggagggaata 24164515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 10674238 - 10674127
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||||||||||||| ||||||||||||||||  | |||||||||||   |||||||||| |||||||||||||||| ||||||| || ||||| ||||    
T  10674238 actttttagattcattatgtaagtgatgtatctaatctatatttataa---caagatacattaattattcaatgaacctaaaaagtcaaatgttttttat 10674142  T
Q  188 aataaggaccggagg 202  Q
    |||||| ||||||||    
T  10674141 aataagtaccggagg 10674127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 33901168 - 33901042
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| |||||||||||||||| ||||| ||||||||||  | |||||||||||   |||||||||| || ||||| ||||| |||||||     
T  33901168 tataagaaacatttgactttttagattcattatgtaaatgatgtatctagtctatatttataa---caagatacattaactattctatgaatcaaaaaaa 33901072  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    | |||||||||||||||||||||| |||||    
T  33901071 tcaattgtttcttataataaggacaggagg 33901042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 41487896 - 41487795
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||||| ||||||| || | ||||||||||||||||||    
T  41487896 ttcattgtgtaagtgatgtatctagtctatatttacaataa---gatacattaattattctatgaacctaaaaagtcaactttttcttataataaggacc 41487800  T
Q  198 ggagg 202  Q
    |||||    
T  41487799 ggagg 41487795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 47612405 - 47612284
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||||| ||||| ||||||||  | |||||||||||   | |||||||| |||||||||||||||| ||||||| | ||||| || ||    
T  47612405 actttttaggttcattgtataagtaatgtatctagtctatatttataa---cgagatacattaattattcaatgaacctaaaaagtcatttgttgctaat 47612309  T
Q  188 aataaggaccggaggaaataattta 212  Q
    ||||||||||||||| | |||||||    
T  47612308 aataaggaccggagggagtaattta 47612284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 13860236 - 13860368
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||  || ||||||||| ||||||||||  | |||||||||||   ||| |||||| |||||| ||||||| | ||||||    
T  13860236 tataagaaacattttactttttaagtttattgtgtaa-tgatgtatctagtctatatttataa---caatatacattaattatacaatgaatctaaaaag 13860331  T
Q  173 ttaattgtttcttataataaggaccggaggaaataat 209  Q
    | ||||||||||||||||||||| |||||| ||||||    
T  13860332 tcaattgtttcttataataaggatcggagggaataat 13860368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 48949015 - 48948947
Alignment:
Q  135 ataacaagatacatcaattattcaatgaaccaaaaa--agttaattgtttcttataataaggaccggag 201  Q
    |||||||||||||| |||||||| ||||||||||||  |||||||| ||||||||||||||||||||||    
T  48949015 ataacaagatacattaattattctatgaaccaaaaaagagttaattatttcttataataaggaccggag 48948947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 41088967 - 41088856
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| || || |||||||| ||||||||  | |||||||||||   | | |||||| |||||||||||||| | ||||||| ||||||||||| |    
T  41088967 actttttaggttaatcgtgtaagtaatgtatctagtctatatttataa---cgaaatacattaattattcaatgaatctaaaaagtcaattgtttcttgt 41088871  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  41088870 aataaggaccggagg 41088856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 45123363 - 45123244
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| |||||||||| ||||||||||||||  | ||||||||||||   ||||||||| |||||||| |||||   ||||||| || | ||| |    
T  45123363 ttaacttttttgattcattgtataagtgatgtatctaatctatatttataat---aagatacattaattattctatgaatttaaaaagtcaacttttttt 45123267  T
Q  185 tataataaggaccggaggaaata 207  Q
    |||| ||||||||||||| ||||    
T  45123266 tatagtaaggaccggagggaata 45123244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 29559470 - 29559576
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| ||||| |||||||| ||||||||  | |||||||||||   | | |||||| |||||||||||||| | ||||||| ||||||||||| |    
T  29559470 actttttaggttcatcgtgtaagtaatgtatctagtctatatttataa---cgaaatacattaattattcaatgaatctaaaaagtcaattgtttcttgt 29559566  T
Q  188 aataaggacc 197  Q
    ||||||||||    
T  29559567 aataaggacc 29559576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 29835108 - 29835214
Alignment:
Q  79 aaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaatt 178  Q
    ||||| || |||||||||||| ||||||||| ||||||||||  |||||||||   | ||| ||||| || |||||||||||||| | |||||||||||     
T  29835108 aaaaaattgactttttagatttattgtgtaaatgatgtatctaatttatattt---acaacgagatatattaattattcaatgaatctaaaaagttaata 29835204  T
Q  179 gtttcttata 188  Q
    ||||||||||    
T  29835205 gtttcttata 29835214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 41395692 - 41395808
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    ||||||||||  ||||||||| ||||||||||||||  | ||||||||||||   |||||| || |||||||| ||||| | ||||||| || | |||||    
T  41395692 ttaacttttttaattcattgtataagtgatgtatctagtctatatttataat---aagatatattaattattctatgaatctaaaaagtcaactttttct 41395788  T
Q  185 tataataaggaccggaggaa 204  Q
    ||||||||| |||| |||||    
T  41395789 tataataagaaccgaaggaa 41395808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 41487874 - 41487935
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||||||||| | ||||||||||||||||||||||||||||    
T  41487874 agatacatcacttacacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagg 41487935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 22618246 - 22618306
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggag 201  Q
    |||||||||| |||  ||||||||| ||||||| |||||||||||||||||||||||||||    
T  22618246 agatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataaggaccggag 22618306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 492
Target Start/End: Original strand, 23682504 - 23682547
Alignment:
Q  449 aaattgaaaactttgacattttaaaaaataattatttaatttag 492  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  23682504 aaattaaaaactttgacattttaaaaaataattatttaatttag 23682547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 24932454 - 24932513
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| |||||||| ||||||||||||||| |||||||||||||| ||||||    
T  24932454 atacatcacttatacaatgaactaaaaaagttaattgtctcttataataaggatcggagg 24932513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 41395727 - 41395668
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||||| |||| |||||||  |||||||||||||||||||||||||||||| ||||    
T  41395727 agatacatcacttatacaatgaattaaaaaagttaattgtttcttataataaggatcgga 41395668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 47484063 - 47484165
Alignment:
Q  97 attcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggac 196  Q
    |||||||| |||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||||| ||||||| || | || ||||||||||||||    
T  47484063 attcattgcgtaagtgatgtatctagtctatatttacaataa---gatacattaattattctatgaacctaaaaagtcaacttttacttataataaggac 47484159  T
Q  197 cggagg 202  Q
     |||||    
T  47484160 aggagg 47484165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 3633209 - 3633330
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||| | ||||||||||||||  | || ||||   ||||| |||||||||| |||  ||||||||| ||||||    
T  3633209 tataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacattt---ataacgagatacatcacttaaacaatgaacctaaaaag 3633305  T
Q  173 ttaattgtttcttataataaggacc 197  Q
    | || | ||||||||||||||||||    
T  3633306 tcaaatatttcttataataaggacc 3633330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 18064827 - 18064726
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||| ||||||||||||||  | |||||||  |||||   ||||||| |||||||| ||||||  |||||||||| | ||||||||| ||||||||    
T  18064827 ttcattgtttaagtgatgtatctagtctatattttcaataa---gatacattaattattctatgaacttaaaaagttaactttttcttatattaaggacc 18064731  T
Q  198 ggagg 202  Q
    |||||    
T  18064730 ggagg 18064726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 22618278 - 22618169
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||||||||||||||||||||  | |||||||   | |||||||||||| ||||| |||||||| | ||||| | ||   ||||||||    
T  22618278 actttttaggttcattgtgtaagtgatgtatctagtctatattt---acaacaagatacattaattactcaatgaatctaaaaaatcaaaaatttcttat 22618182  T
Q  188 aataaggaccgga 200  Q
    |||||||| ||||    
T  22618181 aataaggaacgga 22618169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 12807008 - 12806912
Alignment:
Q  103 tgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||||||| |  | |||||||| |||||   ||||||| |||||||  ||||||| ||||||| || | |||||||||||||||||||||||    
T  12807008 tgtgtaagtgatgtatgtagtctatatttacaataa---gatacattaattattttatgaacctaaaaagtcaactttttcttataataaggaccggagg 12806912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 24932446 - 24932385
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||| |||||||| ||||||| ||||||| |||| ||||||||||||||||||| |||||    
T  24932446 atacattaattattctatgaacctaaaaagtcaattttttcttataataaggaccgaaggaa 24932385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 28248533 - 28248441
Alignment:
Q  101 attgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggac 196  Q
    |||||||||||||||||| |  | |||||||||||   | |||| ||| |||||||||||||| | |||| || ||||||||||||||||||||||    
T  28248533 attgtgtaagtgatgtatatagtctatatttataa---cgagatgcattaattattcaatgaatctaaaatgtcaattgtttcttataataaggac 28248441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 32811441 - 32811396
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  32811441 atacatcaattattcaatgaatcaaaaaagtaaattgtttcttata 32811396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 40198673 - 40198608
Alignment:
Q  137 aacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| ||| |||||||| ||||||| ||||||| || | |||||||||||||||||||||||    
T  40198673 aacaagatgcattaattattctatgaacctaaaaagtcaactttttcttataataaggaccggagg 40198608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 1366658 - 1366598
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagga 203  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   ||||||||||||    
T  1366658 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagga 1366598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 200
Target Start/End: Complemental strand, 3633321 - 3633197
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||||| ||||||||||||||| || |||  | ||   || |||||||||| |||   |||||||| ||||||    
T  3633321 tataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgtt-ataaatgtag--actagatacatcacttaaataatgaacctaaaaag 3633225  T
Q  173 ttaattgtttcttataataaggaccgga 200  Q
    | || |||||||||||||||||||||||    
T  3633224 tcaaatgtttcttataataaggaccgga 3633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 28248535 - 28248587
Alignment:
Q  158 aatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaataatt 210  Q
    |||||||| ||||||||||||||||||| |||||| ||||||||||| |||||    
T  28248535 aatgaacctaaaaagttaattgtttcttgtaataatgaccggaggaagtaatt 28248587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 4826846 - 4826905
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  4826846 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 4826905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 28020064 - 28020005
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||||  |||||| ||||    
T  28020064 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttataaataggaccagagg 28020005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 45123328 - 45123379
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataa 192  Q
    |||||||||| |||| ||||||| |||||||||||||| |||||||||||||    
T  45123328 agatacatcacttatacaatgaatcaaaaaagttaattatttcttataataa 45123379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 7456437 - 7456534
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| |||||||||||||||||| ||| ||||||||||  | |||||||   | |||||||||||| ||||| |||||||| | ||||||    
T  7456437 tataagaaatatttgactttttagattcattgtataaatgatgtatctagtctatattt---acaacaagatacattaattactcaatgaatctaaaaag 7456533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 27320388 - 27320438
Alignment:
Q  152 ttattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  27320388 ttatacaatgaaccaaaaaaatcaattgtttcttataataaggaccagagg 27320438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 34299740 - 34299842
Alignment:
Q  395 gttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgaca-ttttaaaaaataattatttaatttag 492  Q
    |||||||||| |||||| |||||||| ||  |||||||||||||   ||| || ||||||||||||||||||| ||||||| |||||||  ||||| |||    
T  34299740 gttaaggaccttaaatagtaactttttatgaaagtttgtgtaatcagtgctttgtaaattgaaaactttgacatttttaaagaataattgcttaatctag 34299839  T
Q  493 cat 495  Q
    |||    
T  34299840 cat 34299842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 491
Target Start/End: Complemental strand, 48838019 - 48837977
Alignment:
Q  449 aaattgaaaactttgacattttaaaaaataattatttaattta 491  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  48838019 aaattgaaaactttgatatttttaaaaataattatttaattta 48837977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 31227577 - 31227622
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  31227577 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 31227622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 40234831 - 40234770
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  40234831 agatacatcagttacacaatgaatctaaaaagtcaattgtttcttataataagaaccggagg 40234770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 40234799 - 40234871
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaa 163  Q
    |||||||||||||||||||||| ||||||||||  | |||||||   | |||||||||||| ||||| ||||||||    
T  40234799 actttttagattcattgtgtaactgatgtatctagtctatattt---acaacaagatacatgaattactcaatgaa 40234871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 41088956 - 41089001
Alignment:
Q  162 aaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||    
T  41088956 aacctaaaaagtcaattgtttcttataataaggaccggaggtaata 41089001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 47612373 - 47612434
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| | |||| ||||||||| ||||||| ||||| | ||||||||||||||||||||    
T  47612373 agatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagg 47612434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 453 - 496
Target Start/End: Original strand, 5482463 - 5482507
Alignment:
Q  453 tgaaaactttgacattttaaaa-aataattatttaatttagcata 496  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  5482463 tgaaaactttgacattttaaaagaataattacttaatttagcata 5482507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 7456484 - 7456424
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggag 201  Q
    |||||||||| |||| ||||||| | ||||||| || | ||||||||||||||||||||||    
T  7456484 agatacatcatttatacaatgaatctaaaaagtcaaatatttcttataataaggaccggag 7456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 27231897 - 27231853
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||    
T  27231897 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttat 27231853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 31903035 - 31903087
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    |||||| |||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  31903035 atacattaattattcaatgaacctaaaaaattaattattttttataataagga 31903087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 36245456 - 36245520
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||||||| |||||||| | ||||||| |||| ||||||||||  ||||| |||||    
T  36245456 acaagatacatcaattactcaatgaatctaaaaagtcaattttttcttataaataggacaggagg 36245520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 7999491 - 7999569
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattg 179  Q
    |||||||||||||||||||||||  | |||||||   ||||| |||| ||| ||||||| |||||||| ||||||| |||||    
T  7999491 ttcattgtgtaagtgatgtatctagtctatattt---ataacgagatgcattaattatttaatgaacctaaaaagtcaattg 7999569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 28677380 - 28677321
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| ||||||| ||||||||| || ||||||||||||  |||||||||||    
T  28677380 atacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagg 28677321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 29559484 - 29559441
Alignment:
Q  159 atgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||    
T  29559484 atgaacctaaaaagtcaattgtttcttataataaggatcggagg 29559441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 36245439 - 36245380
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| ||||||| ||||||||| || ||||||||||||  |||||||||||    
T  36245439 atacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaacaggaccggagg 36245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 37006520 - 37006465
Alignment:
Q  142 gatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    ||||||||| |||| |||| ||| |||||||| |||||||||||||||||| ||||    
T  37006520 gatacatcacttatacaataaactaaaaaagtcaattgtttcttataataacgacc 37006465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 47280236 - 47280178
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||| | |||| |||||||| ||||||||||||||||||||||||||| || ||||||    
T  47280236 atacattatttatacaatgaac-aaaaaagttaattgtttcttataataaagatcggagg 47280178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 47484086 - 47484027
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||||| |||  |||||||  |||||| | ||||||||||||||||||||||||||    
T  47484086 agatacatcacttacgcaatgaataaaaaaaatcaattgtttcttataataaggaccgga 47484027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 10674206 - 10674272
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||||||||| |||   |||||| | ||||||| ||||||||||||||||||||| |||||| ||||    
T  10674206 agatacatcacttacataatgaatctaaaaagtcaattgtttcttataataaggatcggagggaata 10674272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 24610835 - 24610937
Alignment:
Q  395 gttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgacattttaaaa-aataattatttaatttag 492  Q
    |||||||||  ||||| |||| |||| ||  ||||||||||||||  ||  ||| ||||| |||||||| ||||||||||| ||||||| ||||||||||    
T  24610835 gttaaggactttaaatgataattttttataaaagtttgtgtaattagtgaattagaaattcaaaactttaacattttaaaagaataattgtttaatttag 24610934  T
Q  493 cat 495  Q
    |||    
T  24610935 cat 24610937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 27231919 - 27231977
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||| | ||||||||||  |||||||||||    
T  27231919 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggagg 27231977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 37006502 - 37006599
Alignment:
Q  101 attgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgttt-cttataataaggaccgg 199  Q
    ||||| |||||||||||||   |||||||||| ||||    ||||||| |||||||| ||||||  ||||||| |||| ||| |||||||||||||||||    
T  37006502 attgtataagtgatgtatccagtttatatttacaatat---gatacattaattattctatgaacttaaaaagtcaatttttttcttataataaggaccgg 37006598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 8566144 - 8566099
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    |||||||| |||| ||||||| |||||||||||| |||||||||||    
T  8566144 atacatcatttatgcaatgaatcaaaaaagttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 16861575 - 16861530
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||||||||||||||| | ||||||| |||||||| |||||    
T  16861575 atacatcaattattcaatgaatctaaaaagtcaattgttttttata 16861530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 24164599 - 24164660
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||   |||||||| ||||||| || |||||||||||||||||| ||||||    
T  24164599 agatacatcacttacataatgaacctaaaaagtcaaatgtttcttataataaggatcggagg 24164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 40599998 - 40600047
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataa 192  Q
    |||||||| |||  ||||||||| ||||||||||||||| ||||||||||    
T  40599998 atacatcacttacacaatgaacctaaaaagttaattgttgcttataataa 40600047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 40600031 - 40599998
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtat 118  Q
    |||||||||||| |||||||||||||||||||||    
T  40600031 ttaactttttaggttcattgtgtaagtgatgtat 40599998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 41850681 - 41850738
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||| |||| ||||||| ||||||||| || ||||||||||||  |||||||||    
T  41850681 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccgga 41850738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 42457043 - 42456998
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  42457043 atacatcaactattcaatgaatcaaaaaagtaaatcgtttcttata 42456998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 4e-28; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 52966413 - 52966536
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| |||||||| ||||||||  |||||||| ||||||||||||||  | |||||||||||   |||||| ||| |||||||| ||||||||||||||    
T  52966413 tataagaaaaatttgactttttaagttcattgtataagtgatgtatctagtctatatttataa---caagatgcattaattattctatgaaccaaaaaag 52966509  T
Q  173 ttaattgtttcttataataaggaccgg 199  Q
    | |||||||||||||||||||||||||    
T  52966510 tcaattgtttcttataataaggaccgg 52966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 73 - 196
Target Start/End: Original strand, 52136717 - 52136837
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||| |  | |||||||||||   |||||||||| |||||||| |||||| ||||||     
T  52136717 tataagaaaaaattaactttttaggttcattgtgtaagtgatgtatttagtctatatttataa---caagatacattaattattctatgaactaaaaaaa 52136813  T
Q  173 ttaattgtttcttataataaggac 196  Q
    | ||||||||||||||||||||||    
T  52136814 tcaattgtttcttataataaggac 52136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 4418227 - 4418101
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||||| || | ||||||| ||||||||||||||||||||| |  |||||||||||||   ||| |||||| |||||||| |||||| ||||||     
T  4418227 tataagaaaaaattgattttttaggttcattgtgtaagtgatgtatttagtttatatttataa---caaaatacattaattattctatgaactaaaaaaa 4418131  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    | ||||||||||||||||||||||||||||    
T  4418130 tcaattgtttcttataataaggaccggagg 4418101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 1140983 - 1140871
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||   ||||||| ||||||||||||||||||||| | ||||| | |||||||| |    
T  1140983 ttaactttttagattcattgtgtaagtgatgtatctggtctatattt---ataacaaaatacatcaattattcaatgaatctaaaaattcaattgtttat 1140887  T
Q  185 tataataaggaccgga 200  Q
    | |||||| |||||||    
T  1140886 tctaataatgaccgga 1140871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 43141831 - 43141759
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaataatttaa 213  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  43141831 agatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagggaatattttaa 43141759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 29686418 - 29686544
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||||||||| ||||||||||  | |||||||||||   ||| |||||| |||||| |||||||   |||||     
T  29686418 tataagaaacatttgactttttaggttcattgtgtaaatgatgtatctagtctatatttataa---caatatacattaattatacaatgaatttaaaaaa 29686514  T
Q  173 ttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||||||||||||||||||||    
T  29686515 ttaattgtttcttataataaggaccggagg 29686544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 42160103 - 42159978
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| |||||||||| ||||| |||||||||||||| |  | |||||||||||   |||||||||| |||||||| |||||| ||||||     
T  42160103 tataagaaacatttgactttttagaatcattatgtaagtgatgtatttagtctatatttataa---caagatacattaattattctatgaacaaaaaaaa 42160007  T
Q  173 ttaattgtttcttataataaggaccggag 201  Q
    | |||| ||||||||||||||||||||||    
T  42160006 tcaattatttcttataataaggaccggag 42159978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 54864147 - 54864213
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54864147 agatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagggaata 54864213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 31853197 - 31853081
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||  | |||||||   |||||||||||||| |||||||| |||||  ||||||     
T  31853197 tataagaaaaatttgactttttaggttcattgtgtaagtgatgtatctagtctatattt---ataacaagatacattaattattctatgaattaaaaaaa 31853101  T
Q  173 ttaattgtttcttataataa 192  Q
    | |||| |||||||||||||    
T  31853100 tcaattatttcttataataa 31853081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 25756745 - 25756856
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||| ||||||||||||||||||  | | |||||   ||||| |||||||| |||||| ||||||||  ||||||| |||||||||||||    
T  25756745 actttttaggttcactgtgtaagtgatgtatctagtctctattt---ataacgagatacattaattatccaatgaacataaaaagtcaattgtttcttat 25756841  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  25756842 aataaggaccggagg 25756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 54673425 - 54673315
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||| ||||||||||||||||  | |||||||||||   | |||| ||| | |||||||||||||| ||||||| || ||||||||||    
T  54673425 actttttaggttcattatgtaagtgatgtatctagtctatatttataa---cgagatgcattacttattcaatgaacctaaaaagtcaaatgtttcttat 54673329  T
Q  188 aataaggaccggag 201  Q
    ||||||||||||||    
T  54673328 aataaggaccggag 54673315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 54864182 - 54864068
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||| ||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||||| ||||||| || | |||||    
T  54864182 ttaacttttttggttcattgtataagtgatgtatctagtctatatttacaataa---gatacattaattattctatgaacctaaaaagtcaactttttct 54864086  T
Q  185 tataataaggaccggagg 202  Q
    ||||||||||||||||||    
T  54864085 tataataaggaccggagg 54864068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 33615892 - 33615783
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    |||||||||||||||||||||||||||||||  | |||||||| |||   ||||||||| ||||| |||||||| | ||||| | ||  |||||||||||    
T  33615892 tttttagattcattgtgtaagtgatgtatctagtctatatttacaat---aagatacattaattactcaatgaatctaaaaaatcaaaagtttcttataa 33615796  T
Q  190 taaggaccggagg 202  Q
    |||||||||||||    
T  33615795 taaggaccggagg 33615783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 33622945 - 33622884
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33622945 agatacatcacctatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 33622884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 43141796 - 43141912
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||| ||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||||| ||||||| || | |||||    
T  43141796 ttaacttttttggttcattgtataagtgatgtatctaatctatatttacaataa---gatacattaattattctatgaacctaaaaagtcaactttttct 43141892  T
Q  185 tataataaggaccggaggaa 204  Q
    |||||||| |||||||||||    
T  43141893 tataataaagaccggaggaa 43141912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 1205212 - 1205091
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||||| || | |||||| ||||||||| ||||||||||||||  | ||||||||||||   ||||||||| |||||||| | ||| ||||||||    
T  1205212 tataagaaaaaattgattttttatattcattgtctaagtgatgtatctagtctatatttataat---aagatacattaattattc-acgaatcaaaaaag 1205117  T
Q  173 ttaattgtttcttataataaggaccg 198  Q
    |||||||||| ||||||||| |||||    
T  1205116 ttaattgttttttataataaagaccg 1205091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 24100830 - 24100763
Alignment:
Q  135 ataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||||| ||||||    
T  24100830 ataacaagatacattaattattcaatgaatctaaaaagttaattatttcttataataaggatcggagg 24100763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 25874783 - 25874844
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  25874783 agatacatcacttatacaatgaaccaaaaaaattaattctttcttataataaggaccggagg 25874844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 27587279 - 27587390
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||||||||| ||| | ||| ||||||||||  | |||||||||||   | |||||||| |||||||||||||||| ||||| | |||| ||||||||    
T  27587279 actttttagatttattatataaatgatgtatctagtgtatatttataa---cgagatacattaattattcaatgaacctaaaaaataaattatttcttat 27587375  T
Q  188 aataaggaccggagg 202  Q
    |||||||| ||||||    
T  27587376 aataaggatcggagg 27587390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 40592742 - 40592829
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagtta 175  Q
    |||||||||| |||||||||| ||||||||||||||  |||||||||   |||||||||||||| |||||||| || |||| |||||||||    
T  40592742 ttaactttttggattcattgtataagtgatgtatctagtttatattt---ataacaagatacattaattattctataaacctaaaaagtta 40592829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 50511308 - 50511244
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||||||| |||  |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  50511308 atacatcacttacacaatgaaccaaaaaagttaattgtttcttataataaagaccggaagaaata 50511244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 33622910 - 33623024
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||||| || |||||||||||  |||||||||| |||||   ||||||| |||||||| ||||||  ||||||| |||| |||||    
T  33622910 ttaacttttttggttcattgtataggtgatgtatctagtttatatttacaataa---gatacattaattattctatgaacgtaaaaagtcaattttttct 33623006  T
Q  185 tataataaggaccggagg 202  Q
    ||||||| ||| ||||||    
T  33623007 tataatagggatcggagg 33623024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 35929115 - 35929009
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||  | ||||||||||||||   ||||||| |||||||| || |||| ||||| | || | ||||||||||||| |||     
T  35929115 ttcattgtgtaagtgatgtatctaatctatatttataataa---gatacattaattattctataaacctaaaaaatcaactttttcttataataaagacg 35929019  T
Q  198 ggaggaaata 207  Q
    ||||||||||    
T  35929018 ggaggaaata 35929009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 24100884 - 24100941
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    ||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||    
T  24100884 acaagatacattaattattcaatgaatctaaaaagttaattatttcttataataagga 24100941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 37895320 - 37895259
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||| ||||||||||||||| | || |||||||||||||||||||||||||    
T  37895320 agatacatcacttatacaatgaaccaaaaaaatcaactgtttcttataataaggaccggagg 37895259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 56491105 - 56491221
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||||| ||||| ||||||||  | |||||||||||   | || ||||| |||||||||||||||  ||||||| | ||||| |||||    
T  56491105 actttttaggttcattgtataagtaatgtatctagtctatatttataa---cgaggtacattaattattcaatgaacttaaaaagtcatttgttgcttat 56491201  T
Q  188 aataaggaccggaggaaata 207  Q
    |||||||||| |||| ||||    
T  56491202 aataaggacccgagggaata 56491221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 9813491 - 9813602
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||| |||||||||||||||||||||||  | |||||||   ||||| |||| ||| ||| || |||| |||| ||||||| ||||||| ||||| |    
T  9813491 tttttaggttcattgtgtaagtgatgtatctagtctatattt---ataacgagatgcattaatcatgcaataaacctaaaaagtcaattgttgcttatta 9813587  T
Q  190 taaggaccggaggaa 204  Q
    |||||| ||||||||    
T  9813588 taaggatcggaggaa 9813602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 32193523 - 32193479
Alignment:
Q  158 aatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  32193523 aatgaaccaaaaaagtcaattgtttcttataataaggaccggagg 32193479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 35877432 - 35877318
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||| ||||| | ||||||||||||||||||||| |    |||||||| |||   ||||||||| |||||||| ||||| | ||||||| || | |||||    
T  35877432 ttaatttttttggttcattgtgtaagtgatgtatttagactatatttacaat---aagatacattaattattctatgaatctaaaaagtcaactttttct 35877336  T
Q  185 tataataaggaccggagg 202  Q
    ||||||||||||||||||    
T  35877335 tataataaggaccggagg 35877318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 36196428 - 36196369
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| ||||  |||||||||||||| | ||||||||||||||||||||||||||||    
T  36196428 atacatcacttataaaatgaaccaaaaaaatcaattgtttcttataataaggaccggagg 36196369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 52136762 - 52136703
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||  ||||||||| |||||||||||| |||||||||||||||||||||||    
T  52136762 atacatcacttacacaatgaacctaaaaagttaattttttcttataataaggaccggagg 52136703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 8347535 - 8347636
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||| ||| ||||||||||  | |||||||| |||||   ||||||| | |||||| ||||||| ||||||| || | ||||||||||||||||||    
T  8347535 ttcattgtataaatgatgtatctagtctatatttacaataa---gatacattatttattctatgaacctaaaaagtcaactttttcttataataaggacc 8347631  T
Q  198 ggagg 202  Q
    |||||    
T  8347632 ggagg 8347636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 27587311 - 27587245
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||||||||| ||||  ||| || | ||||||| |||||||||||||||||||||||||||||||||    
T  27587311 agatacatcatttatataataaatctaaaaagtcaattgtttcttataataaggaccggaggaaata 27587245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 495
Target Start/End: Original strand, 37461501 - 37461571
Alignment:
Q  426 aagtttgtgtaattgatgc-ttataaattgaaaactttgacattttaaaaaataattatttaatttagcat 495  Q
    ||||||||||||| | ||| ||| ||||||||||||||||||||||||||  |||||| ||||||||||||    
T  37461501 aagtttgtgtaatcggtgcattaaaaattgaaaactttgacattttaaaatttaattacttaatttagcat 37461571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 1100961 - 1100900
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||| ||||||| || |||||||||||||||||||||||||    
T  1100961 agatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagg 1100900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 29686465 - 29686404
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||| ||||||| || |||||||||||||||||||||||||    
T  29686465 agatacatcatttacacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagg 29686404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 48195975 - 48196036
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||||| |||| ||||||||||||||||| || ||||||||||||  |||||||||||||    
T  48195975 atacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggaggaa 48196036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 35877399 - 35877451
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    |||||||| |||  ||||||||||||||| |||||||||||||||||||||||    
T  35877399 atacatcacttacacaatgaaccaaaaaaattaattgtttcttataataagga 35877451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 41116628 - 41116564
Alignment:
Q  140 aagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    ||||||||||||||| |||||||| | |||||||||| | ||||||||||  |||||||||||||    
T  41116628 aagatacatcaattactcaatgaatctaaaaagttaaatttttcttataaataggaccggaggaa 41116564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 50511275 - 50511390
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | ||||||||||||||||||||| |    |||||||| |||   ||||||||| |||||||| || || | ||| ||| || | |||||    
T  50511275 ttaacttttttggttcattgtgtaagtgatgtatttagactatatttacaat---aagatacattaattattctataaatctaaagagtcaactttttct 50511371  T
Q  185 tataataaggaccggagga 203  Q
    |||||||||||||||||||    
T  50511372 tataataaggaccggagga 50511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 7086214 - 7086273
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||||||| |||  ||||||||| ||||||| || |||||||||||||||||||||||    
T  7086214 agatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccgga 7086273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 19350661 - 19350614
Alignment:
Q  157 caatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||    
T  19350661 caatgaaccaaaaaaattaattgtttcttataataaagatcggaggaa 19350614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 40592777 - 40592726
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataa 192  Q
    |||||||||| |||| ||||||| | ||||||||||||||||||||||||||    
T  40592777 agatacatcacttatacaatgaatccaaaaagttaattgtttcttataataa 40592726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 41116580 - 41116627
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  41116580 tataagaaaaatttaactttttagattcattgagtaattgatgtatct 41116627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 43020840 - 43020899
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  43020840 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 43020899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 47866120 - 47866179
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  47866120 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 47866179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 49951742 - 49951789
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaatttagcat 495  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  49951742 aaattgaaaactttgacattttaaaagaataattacttaatttagcat 49951789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 50511471 - 50511569
Alignment:
Q  99 tcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccg 198  Q
    |||||||||||| |||||||||  |||||||||| |||||   ||||||| |||||||| ||||||| ||| ||| || | ||||||||||| | |||||    
T  50511471 tcattgtgtaagggatgtatctagtttatatttacaataa---gatacattaattattctatgaacctaaagagtcaactttttcttataatgaagaccg 50511567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 23208697 - 23208647
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataag 193  Q
    ||||||||||||| ||||||||| |||||||||||||||| | ||||||||    
T  23208697 atacatcaattatacaatgaacctaaaaagttaattgtttttcataataag 23208647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 34226450 - 34226404
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  34226450 atacatcaattattcaatgaatcaaaaaagtaaattgtttattataa 34226404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 36196447 - 36196509
Alignment:
Q  140 aagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| |||||||| ||||| | ||||| | |||| |||||||||||||||||||||||    
T  36196447 aagatacattaattattctatgaatctaaaaaatcaattttttcttataataaggaccggagg 36196509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 37895298 - 37895399
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||| ||||||||||||||  | || ||||| |||   || |||||| |||||||| ||||| | ||||||| || | ||||||||||||||||||    
T  37895298 ttcattgtataagtgatgtatctagtctacatttacaat---aaaatacattaattattctatgaatctaaaaagtcaactttttcttataataaggacc 37895394  T
Q  198 ggagg 202  Q
    |||||    
T  37895395 ggagg 37895399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 20459304 - 20459259
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  20459304 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 20459259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 25756777 - 25756716
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  || |||||| ||||||| |||| |||||||||||||||||||||||    
T  25756777 agatacatcacttacacagtgaacctaaaaagtcaattatttcttataataaggaccggagg 25756716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 38208332 - 38208393
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  |||||||| ||||| || |||||||||||||| |||||||||||||    
T  38208332 agatacatcacttaaacaatgaactaaaaatgtcaattgtttcttatattaaggaccggagg 38208393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 50511437 - 50511392
Alignment:
Q  157 caatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||||||| || |||||||||||||||||||||||||    
T  50511437 caatgaactaaaaaagtcaagtgtttcttataataaggaccggagg 50511392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 56491137 - 56491076
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| | |||| ||||||||| ||||||| ||||| | ||||||||||||||||||||    
T  56491137 agatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagg 56491076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 3345400 - 3345456
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    ||||||||||||||||||||||||| ||||||| |||| | |||||| | |||||||    
T  3345400 agatacatcaattattcaatgaacctaaaaagtgaattatgtcttattacaaggacc 3345456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 23558952 - 23559051
Alignment:
Q  101 attgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    ||||||||| ||||||||||  | |||||||   ||||| ||||| || |||||| |||||| || ||||| | ||||||| |||||||||| |||||||    
T  23558952 attgtgtaactgatgtatctagtctatattt---ataacgagatatattaattatccaatgagcctaaaaaatcaattgttacttataataaagaccgga 23559048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 4418182 - 4418241
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||  ||||||||| ||||| | |||| |||||||||||||||||||||||    
T  4418182 atacatcacttacacaatgaacctaaaaaatcaattttttcttataataaggaccggagg 4418241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 8347557 - 8347498
Alignment:
Q  141 agatacatcaattattcaatgaaccaa-aaaagttaattgtttcttataataaggaccgg 199  Q
    |||||||||| |||| ||||||||||| |||| | || ||||||||||||||||||||||    
T  8347557 agatacatcatttatacaatgaaccaaaaaaaatcaaatgtttcttataataaggaccgg 8347498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 20745395 - 20745336
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| |||||||| |||||   |||||||||||    
T  20745395 atacatcaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 20745336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 22210858 - 22210803
Alignment:
Q  137 aacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataa 192  Q
    ||||||||| || ||||||||||||||   ||||||| ||||||||||||||||||    
T  22210858 aacaagatatattaattattcaatgaatttaaaaagtcaattgtttcttataataa 22210803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 30191981 - 30192040
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| ||||||| |||||||||||| ||||||||||||  | |||||||||    
T  30191981 atacatcatttatgcaatgaatcaaaaaagttaaatgtttcttataaatacgaccggagg 30192040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 492
Target Start/End: Complemental strand, 31262969 - 31262926
Alignment:
Q  449 aaattgaaaactttgacattttaaaaaataattatttaatttag 492  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||    
T  31262969 aaatcgaaaactttgacatttttaaaaataattacttaatttag 31262926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 40780313 - 40780254
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| |||| |||||| ||||||||| ||||||||||||||   |||||||||||    
T  40780313 atacatcaactattgaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 40780254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 43556773 - 43556836
Alignment:
Q  140 aagatacatcaattattcaatgaaccaaaaaagttaattgttt-cttataataaggaccggagg 202  Q
    ||||||||| |||||||| ||||||| ||||| | |||| ||| ||||||||||||||||||||    
T  43556773 aagatacattaattattctatgaacctaaaaaatcaatttttttcttataataaggaccggagg 43556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 53225729 - 53225788
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||| |||||||||||||| | ||||||| |||| ||||||||||  |||||||||||    
T  53225729 atacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccggagg 53225788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 54673393 - 54673448
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggac 196  Q
    |||||||||| |||   |||||||| ||||||| ||||||||||||||||||||||    
T  54673393 agatacatcacttacataatgaacctaaaaagtcaattgtttcttataataaggac 54673448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 20459326 - 20459384
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||| | ||||||||||  |||||||||||    
T  20459326 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggagg 20459384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 22019982 - 22019940
Alignment:
Q  158 aatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    |||||| | ||||||||||||||| ||||||||||||||||||    
T  22019982 aatgaatctaaaaagttaattgttacttataataaggaccgga 22019940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 22019964 - 22020014
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataa 135  Q
    ||||||||||||||||||| |||||||||||| |||  | |||||||||||    
T  22019964 ttaactttttagattcattctgtaagtgatgtgtctaatctatatttataa 22020014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 32193508 - 32193621
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||| | |||||| ||||||| ||||||||  | ||||||| ||||||   | ||||| |||||||| ||||||  ||||| | ||   ||||||||    
T  32193508 acttttttggttcattatgtaagtaatgtatctagtctatatttctaataa---ggtacattaattattctatgaacttaaaaaatcaacgttttcttat 32193604  T
Q  188 aataaggaccggaggaa 204  Q
    |||||||||||||||||    
T  32193605 aataaggaccggaggaa 32193621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 42804318 - 42804260
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||| | ||||||||||  |||||||||||    
T  42804318 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggagg 42804260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 43020818 - 43020760
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||| | ||||||||||  |||||||||||    
T  43020818 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggagg 43020760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 47866098 - 47866040
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||| | ||||||||||  |||||||||||    
T  47866098 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggagg 47866040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 3043876 - 3043921
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||| | ||||||||||||||    
T  3043876 atacatcaactattcaatgaatcaaaaaaataaattgtttcttata 3043921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 16412293 - 16412236
Alignment:
Q  147 atcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    ||||||||||||||||| | ||||||| |||| ||||||||||  || ||||||||||    
T  16412293 atcaattattcaatgaatctaaaaagtcaattttttcttataaatagaaccggaggaa 16412236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 27841915 - 27841960
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| |||||||||||| |||||| | ||||||||||||||    
T  27841915 atacatcaactattcaatgaacaaaaaaaataaattgtttcttata 27841960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 33615862 - 33615923
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||| | ||||| | |||||||| |||||||||||||||||||    
T  33615862 agatacatcacttacacaatgaatctaaaaattcaattgttttttataataaggaccggagg 33615923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 35929093 - 35929149
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccg 198  Q
    |||||||||| |||  ||||||||||||||| | |||||||||||||||||| |||||    
T  35929093 agatacatcacttacacaatgaaccaaaaaa-tcaattgtttcttataataatgaccg 35929149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 42670782 - 42670835
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctctttta 126  Q
    ||||| ||||| |||||||||| |||||||||||||| | ||||||||| ||||    
T  42670782 tataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgttta 42670835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 43556736 - 43556695
Alignment:
Q  161 gaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||| |||||| | ||||||||||||||||||||||||||||    
T  43556736 gaactaaaaaaatcaattgtttcttataataaggaccggagg 43556695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 44088392 - 44088347
Alignment:
Q  378 aagggaaatgttaaccagttaaggaccataaataataacttttcat 423  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||    
T  44088392 aagggaaatgttaaccagttaaggactttaaatagtaacttatcat 44088347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 48361070 - 48361115
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtat 118  Q
    ||||| |||||||| ||||||||||||||||| |||| ||||||||    
T  48361070 tataagaaaaatttgactttttagattcattgagtaattgatgtat 48361115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 55190730 - 55190685
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||||||| || |||| ||||||||| ||||||||||||||    
T  55190730 atacatcaattatccactgaatcaaaaaagtaaattgtttcttata 55190685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 61; Significance: 9e-26; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 3924 - 3813
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||||||||||||||||||||  | |||||||||||   | |||| ||| || ||||||||||| ||||||||| |||||||||||||    
T  3924 actttttaggttcattgtgtaagtgatgtatctagtctatatttataa---cgagatgcattaagtattcaatgaatcaaaaaagtcaattgtttcttat 3828  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  3827 aataaggaccggagg 3813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 3892 - 3944
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataag 193  Q
    |||||||||| |||  ||||||||| ||||||| |||||||||||||||||||    
T  3892 agatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataag 3944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 9e-26; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 3365293 - 3365412
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||  | |||||||   ||||||||||| || |||||||||||||| |||||||     
T  3365293 tataagaaaaatttaactttttaggttcattgtataagtgatgtatctaatctatattt---ataacaagatatattaattattcaatgaatcaaaaaaa 3365389  T
Q  173 ttaattgtttcttataataagga 195  Q
    | |||| ||||||||||||||||    
T  3365390 tcaattatttcttataataagga 3365412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 28143788 - 28143889
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||  | ||||||||||||||   ||||||| |||||||| ||||||| ||||||| || | ||||||||||||||||||    
T  28143788 ttcattgtgtaagtgatgtatctagtctatatttataataa---gatacattaattattctatgaacctaaaaagtcaactttttcttataataaggacc 28143884  T
Q  198 ggagg 202  Q
    |||||    
T  28143885 ggagg 28143889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 38448971 - 38449084
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||  |||||||||||||||||||||||  | ||||||||| |   |||||| ||||||||||| |||||||| ||||||| ||||||||||||     
T  38448971 actttttatgttcattgtgtaagtgatgtatctgatctatatttatca---caagatgcatcaattatttaatgaacctaaaaagtcaattgtttcttaa 38449067  T
Q  188 aataaggaccggaggaa 204  Q
    |||||| ||||| ||||    
T  38449068 aataagaaccggtggaa 38449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 41464827 - 41464720
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||   | |||||||| |||||||||||||||  ||||| | |||||||| ||||||    
T  41464827 tttttaggttcattgtgtaagtgatgtatctagtctatatttataa---cgagatacattaattattcaatgaacttaaaaaatcaattgttttttataa 41464731  T
Q  190 taaggaccgga 200  Q
    ||| |||||||    
T  41464730 taaagaccgga 41464720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 6971700 - 6971579
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||||||||| ||||||||||  | |||||||||||   ||| |||||| |||||| |||| ||   ||||||    
T  6971700 tataagaaacatttgactttttaggttcattgtgtaaatgatgtatctaatctatatttataa---caatatacattaattatacaataaatttaaaaag 6971604  T
Q  173 ttaattgtttcttataataaggacc 197  Q
    | |||||||||||||||||||||||    
T  6971603 tcaattgtttcttataataaggacc 6971579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 15239735 - 15239836
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||  | |||||||| |||||   |||| || |||||||| ||||||| ||||||| || | ||||||||||||||||||    
T  15239735 ttcattgtgtaagtgatgtatctagtctatatttacaataa---gatatattaattattctatgaacctaaaaagtcaactttttcttataataaggacc 15239831  T
Q  198 ggagg 202  Q
    |||||    
T  15239832 ggagg 15239836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 25795271 - 25795382
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| || || |||||||| ||||||||  | |||||||||||   | | |||||| |||||||||||||| | ||||||| ||||||||||| |    
T  25795271 actttttaggttaatcgtgtaagtaatgtatctagtctatatttataa---cgaaatacattaattattcaatgaatctaaaaagtcaattgtttcttgt 25795367  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  25795368 aataaggaccggagg 25795382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 45076457 - 45076346
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||| | |||||||||||||||||||||||  | ||||| || |||   || |||||| |||||||| ||||||| ||||| | |||| ||||||||    
T  45076457 acttttttggttcattgtgtaagtgatgtatctagtctatatgtacaat---aaaatacattaattattctatgaacctaaaaaatcaattttttcttat 45076361  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  45076360 aataaggaccggagg 45076346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 36103436 - 36103537
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||    |||||||| |||||   ||||||| |||||||| ||||||| ||||| | || | ||||||||||||||||||    
T  36103436 ttcattgtgtaagtgatgtatctagactatatttacaataa---gatacattaattattctatgaacctaaaaaatcaactttttcttataataaggacc 36103532  T
Q  198 ggagg 202  Q
    |||||    
T  36103533 ggagg 36103537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 40534578 - 40534517
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||| |||||||| |||||| | ||||||||||||||||||||||||||||    
T  40534578 agatacatcatttatacaatgaactaaaaaaatcaattgtttcttataataaggaccggagg 40534517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 45076425 - 45076485
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggag 201  Q
    |||||||||| |||  ||||||||||||||||| |||||||| ||||||||||||||||||    
T  45076425 agatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataaggaccggag 45076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 33068540 - 33068642
Alignment:
Q  395 gttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgacatttt-aaaaaataattatttaatttag 492  Q
    ||||||||||||||| | |||||||| ||  |||||||| ||||   ||| ||| |||||||||||||| ||||||| |||||||||||| |||||||||    
T  33068540 gttaaggaccataaaaagtaactttttatgaaagtttgtataatcagtgcattagaaattgaaaactttcacatttttaaaaaataattacttaatttag 33068639  T
Q  493 cat 495  Q
    |||    
T  33068640 cat 33068642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 36103458 - 36103397
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  |||||||| ||||| ||||||||||| |||||||||||||||||||    
T  36103458 agatacatcacttacacaatgaactaaaaatgttaattgtttattataataaggaccggagg 36103397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 4063351 - 4063415
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||| ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  4063351 acaaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 4063415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 4755532 - 4755461
Alignment:
Q  136 taacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||| |||||||| ||||||| |||||| | ||||| |||||||||||||||||||||| ||| || |||||    
T  4755532 taacgagatacattaattatttaatgaatctaaaaaattaattgtttcttataataagggccgaagaaaata 4755461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 6334724 - 6334771
Alignment:
Q  449 aaattgaaaactttgacatttt-aaaaaataattatttaatttagcat 495  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  6334724 aaattgaaaactttgacatttttaaaaaataattttttaatttagcat 6334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 6971653 - 6971716
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||||||| |||  ||||||||| ||||||| || ||||||||||||||||||| |||||||    
T  6971653 agatacatcatttacacaatgaacctaaaaagtcaaatgtttcttataataaggacaggaggaa 6971716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 20555326 - 20555263
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggag 201  Q
    |||||||||||||||||||||||| | | ||||| |||||| ||||||||||  ||||||||||    
T  20555326 acaagatacatcaattattcaatgtatctaaaaaattaattttttcttataaataggaccggag 20555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45034482 - 45034541
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45034482 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45034541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45571114 - 45571173
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45571114 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45571173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45574781 - 45574840
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45574781 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45574840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45578448 - 45578507
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45578448 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45578507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45582115 - 45582174
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45582115 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45585782 - 45585841
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45585782 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45585841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45589449 - 45589508
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45589449 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45589508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45593116 - 45593175
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45593116 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45593175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45596783 - 45596842
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45596783 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45596842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45600450 - 45600509
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45600450 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45600509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45604117 - 45604176
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45604117 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45604176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45607784 - 45607843
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45607784 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45607843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45611451 - 45611510
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45611451 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45611510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 45615118 - 45615177
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  45615118 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 45615177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 11687508 - 11687609
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||| || ||| ||||||||||||||||||||  | |||||||||||   | || || || ||||||||||| || | ||||||| |||||||||||||    
T  11687508 actttataaatttattgtgtaagtgatgtatctagtctatatttataa---cgagttatattaattattcaataaatctaaaaagtcaattgtttcttat 11687604  T
Q  188 aataa 192  Q
    |||||    
T  11687605 aataa 11687609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 29685814 - 29685772
Alignment:
Q  243 actccttaaacatgctaaataaaataattattctttcaaaatt 285  Q
    |||| |||||||||||||||||| |||||||||||||||||||    
T  29685814 actctttaaacatgctaaataaagtaattattctttcaaaatt 29685772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 40534556 - 40534657
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||| ||| ||||||||||  | |||||||| |||||   ||||||| | |||||| ||||||| ||||||| || | | ||||||||||||||||    
T  40534556 ttcattgtataaatgatgtatctagtctatatttacaataa---gatacattatttattctatgaacctaaaaagtcaactttatcttataataaggacc 40534652  T
Q  198 ggagg 202  Q
    |||||    
T  40534653 ggagg 40534657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45571092 - 45571034
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45571092 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45571034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45574759 - 45574701
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45574759 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45574701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45578426 - 45578368
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45578426 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45582093 - 45582035
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45582093 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45582035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45585760 - 45585702
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45585760 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45585702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45589427 - 45589369
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45589427 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45589369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45593094 - 45593036
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45593094 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45596761 - 45596703
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45596761 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45596703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45600428 - 45600370
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45600428 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45600370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45604095 - 45604037
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45604095 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45604037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45607762 - 45607704
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45607762 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45607704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45611429 - 45611371
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45611429 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45611371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45615096 - 45615038
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||||| ||||||||||  |||||||||||    
T  45615096 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggagg 45615038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 45651045 - 45650991
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    |||| ||||| ||||||||| |||| |||||||||||||| ||||||||||||||    
T  45651045 agattcatcagttattcaataaacctaaaaagttaattgtctcttataataagga 45650991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 3365340 - 3365279
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||| ||||||||| |||||||||| | ||||||||||||| |||| ||||    
T  3365340 agatacatcacttatacaatgaacctaaaaagttaaatttttcttataataaagaccagagg 3365279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 3838481 - 3838436
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  3838481 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 3838436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 4044638 - 4044593
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  4044638 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 4044593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 7943519 - 7943584
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaa-ttgtttcttataataaggaccggagg 202  Q
    |||||||||||||||||||||||||| | ||||||| || || ||||||||||  |||||||||||    
T  7943519 acaagatacatcaattattcaatgaatctaaaaagtcaatttttttcttataaataggaccggagg 7943584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 396 - 491
Target Start/End: Original strand, 9049148 - 9049245
Alignment:
Q  396 ttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgacattttaaaa-aataattatttaattta 491  Q
    ||||| ||| ||||||||||||||| ||  || ||||||||||| |||| ||  |||||||||| ||| ||||||||||| |||||||| ||||||||    
T  9049148 ttaagaaccttaaataataactttttataaaaatttgtgtaattaatgcattgaaaattgaaaaatttaacattttaaaagaataattacttaattta 9049245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 15384511 - 15384556
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  15384511 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 15384556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 23464526 - 23464638
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaa-agttaattgtttc 183  Q
    |||||||||| | |||||||| |||| |||||||||  | |||||||| |||||   ||||||| |||||||| ||||||| |||| | | || | ||||    
T  23464526 ttaacttttttggttcattgtataagagatgtatctagtctatatttacaataa---gatacattaattattctatgaacctaaaataatcaactttttc 23464622  T
Q  184 ttataataaggaccgg 199  Q
    ||||||||||||||||    
T  23464623 ttataataaggaccgg 23464638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 44283609 - 44283670
Alignment:
Q  135 ataacaagatacatc-aattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    ||||||||||||||  |||||||||||||| | ||||||| |||| ||||||||||||||||    
T  44283609 ataacaagatacatttaattattcaatgaatctaaaaagtcaattatttcttataataagga 44283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 6971567 - 6971503
Alignment:
Q  135 ataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgg 199  Q
    ||||||| |||||| |||||| |||| ||   ||||||| |||||||||||||||||||||||||    
T  6971567 ataacaatatacattaattatacaataaatttaaaaagtcaattgtttcttataataaggaccgg 6971503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 11030275 - 11030323
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    |||||||||||||| |||||||| | |||||||||||| ||||||||||    
T  11030275 agatacatcaattactcaatgaatctaaaaagttaattttttcttataa 11030323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 25795282 - 25795242
Alignment:
Q  162 aaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  25795282 aacctaaaaagtcaattgtttcttataataaggaccggagg 25795242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 27306777 - 27306725
Alignment:
Q  140 aagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataa 192  Q
    ||||||||| |||||||||||||||| ||||||| || | |||||||||||||    
T  27306777 aagatacattaattattcaatgaacctaaaaagtcaactttttcttataataa 27306725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 27311610 - 27311721
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| ||||||||  || |||| |||||  | |||||||||||   |||||||| | ||||||||||| || | ||||| | ||||||||||| |    
T  27311610 actttttaggttcattgtacaaatgatatatctagtctatatttataa---caagatacgttaattattcaataaatctaaaaaatcaattgtttcttgt 27311706  T
Q  188 aataaggaccggagg 202  Q
     ||||||||||||||    
T  27311707 gataaggaccggagg 27311721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 4655013 - 4655060
Alignment:
Q  449 aaattgaaaactttgacatttt-aaaaaataattatttaatttagcat 495  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  4655013 aaattgaaaactttgatattttaaaaaaataattatctaatttagcat 4655060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 7833347 - 7833300
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||||||||||||||||| | ||||| || |||||||||||||    
T  7833347 agatacatcaattattcaatgaatctaaaaaattgattgtttcttata 7833300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 9373473 - 9373528
Alignment:
Q  137 aacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataa 192  Q
    |||||||||| | ||||||||||||||   ||||||| ||||||||||||||||||    
T  9373473 aacaagatacgttaattattcaatgaatttaaaaagtcaattgtttcttataataa 9373528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 11030322 - 11030275
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    ||||| ||||| |||||||||||||||||||| |||| ||||||||||    
T  11030322 tataagaaaaaattaactttttagattcattgagtaattgatgtatct 11030275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 12486077 - 12486136
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||||||||||| | ||||||| ||||||||||| |||  |||||| ||||    
T  12486077 atacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaataggaccagagg 12486136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 15239757 - 15239694
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||||||| |||  ||||||||||| ||| | ||||||||||||||||||||| | ||||||    
T  15239757 agatacatcacttacacaatgaaccaacaaaatcaattgtttcttataataaggatcagaggaa 15239694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 24389675 - 24389722
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaatttagcat 495  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  24389675 aaattgaaaactttgacatcttaaaagaataattacttaatttagcat 24389722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 491
Target Start/End: Original strand, 30822772 - 30822815
Alignment:
Q  449 aaattgaaaactttgacatttt-aaaaaataattatttaattta 491  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  30822772 aaattgaaaactttgacattttcaaaaaataattacttaattta 30822815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 32066832 - 32066749
Alignment:
Q  394 agttaaggaccataaataataacttttcattgaagtttgtgtaattgatgc-ttataaattgaaaactttgacattttaaaaaa 476  Q
    ||||||||||| ||||| ||||||||| ||  ||||||||||||||  | | ||| ||||| ||||||||||||||| ||||||    
T  32066832 agttaaggaccttaaattataactttttatgaaagtttgtgtaattagtacattagaaattaaaaactttgacatttaaaaaaa 32066749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 42698194 - 42698147
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    ||||| |||||||| ||||||||||||||||| |||| ||||||||||    
T  42698194 tataaaaaaaatttgactttttagattcattgagtaattgatgtatct 42698147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 43135108 - 43135154
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    |||||||||||||| ||| || ||||||||| |||||||||||||||    
T  43135108 atacatcaattatttaataaatcaaaaaagtgaattgtttcttataa 43135154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 45034460 - 45034402
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||| |||||| | |||||||||| | ||||||||||  |||||||||||    
T  45034460 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccggagg 45034402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 6411479 - 6411442
Alignment:
Q  248 ttaaacatgctaaataaaataattattctttcaaaatt 285  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  6411479 ttaaacatgctaaataaagtaattattcttttaaaatt 6411442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 9152462 - 9152523
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||||| |||||||| | ||||||| ||||||||||| |||  | |||||||||    
T  9152462 agatacatcaattactcaatgaatctaaaaagtcaattgtttcttgtaaataagaccggagg 9152523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 21424934 - 21425036
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||||||||| || | ||| |  |||||||||||||  || || ||||||||||| ||||| || | |||| || ||| |||||||||    
T  21424934 actttttagtttcattgtgtaactgttatatttagtttatatttataa--actaggtacatcaattactcaattaatctaaaatgtcaatcgtttcttat 21425031  T
Q  188 aataa 192  Q
    |||||    
T  21425032 aataa 21425036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 73 - 200
Target Start/End: Complemental strand, 8265102 - 8264978
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||||| || | ||||||  |||||||||||||||||||||||  | |||||||||||   |||||||||| |||||||| |||||| ||||||     
T  8265102 tataagaaaaagttgattttttaagttcattgtgtaagtgatgtatctagtctatatttataa---caagatacattaattattctatgaactaaaaaaa 8265006  T
Q  173 ttaattgtttcttataataaggaccgga 200  Q
    | |||||||| ||||||||| |||||||    
T  8265005 tcaattgttttttataataaagaccgga 8264978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 359588 - 359683
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggac 196  Q
    |||||||||||||||||||||||  | |||||||||||   | |||||||| | ||||||| |||||| ||||||| ||||||||||||||||||||||    
T  359588 ttcattgtgtaagtgatgtatctaatctatatttataa---cgagatacattagttattcattgaacctaaaaagtcaattgtttcttataataaggac 359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 29284531 - 29284641
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||| ||||||||||||||||  | |||||||||||   | |||| ||| |||||||||||||| | ||| |||||||||||||||||    
T  29284531 actttttaggttcattatgtaagtgatgtatctagtctatatttataa---cgagatgcattaattattcaatgaaactaaacagttaattgtttcttat 29284627  T
Q  188 aataaggaccggag 201  Q
     |||||||| ||||    
T  29284628 tataaggacgggag 29284641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 28605633 - 28605574
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  28605633 atacatcacttacacaatgaaccaaaaaagttaattgtttcttataataaggaccagagg 28605574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 30438826 - 30438887
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||| |||| ||||||||||||||||| |||||||||||||||| ||||||    
T  30438826 agatacatcacttatacaataaaccaaaaaagttaattatttcttataataaggatcggagg 30438887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 2913448 - 2913337
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||||| ||||| ||||||||  | |||||||||||  || |   |||| |||||||||||||| | ||||||| || |||| |||||    
T  2913448 actttttaggttcattgtataagtaatgtatctagtctatatttataacgacga---acattaattattcaatgaatctaaaaagtcaaatgttgcttat 2913352  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  2913351 aataaggaccggagg 2913337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 2913416 - 2913477
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| | |||| ||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  2913416 agatacattacttatacaatgaacctaaaaagtcaattgttgcttataataaggaccggagg 2913477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 24986017 - 24986069
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    ||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||    
T  24986017 atacatcaattatccaatgaacctaaaaagtgaattgtctcttataataagga 24986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 12217537 - 12217635
Alignment:
Q  101 attgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgttt-cttataataaggaccgg 199  Q
    ||||| ||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||| | ||||||| |||| ||| |||||||||||||||||    
T  12217537 attgtataagtgatgtatctagtctatatttacaataa---gatacattaattattctatgaatctaaaaagtcaatttttttcttataataaggaccgg 12217633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 9343235 - 9343134
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||| | ||| ||||||||| | ||||||||  | |||||||||||   |||||||||| |||||||| ||||| | ||||||| |||| ||||||||    
T  9343235 acttttcaaatttattgtgtaaataatgtatctagtctatatttataa---caagatacattaattattctatgaatctaaaaagtcaattatttcttat 9343139  T
Q  188 aataa 192  Q
    |||||    
T  9343138 aataa 9343134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 1837023 - 1836978
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||    
T  1837023 atacatcaattattcaattaatcaaaaaagtaaattgtttcttata 1836978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 23916226 - 23916271
Alignment:
Q  157 caatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||||    
T  23916226 caatgaatctaaaaagtcaattgtttcttataataaggaccggagg 23916271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 28605600 - 28605712
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | ||||||||||||||||||||| |    |||||||| |||   ||||||||| |||||||| ||||| | |||| || |  | |||||    
T  28605600 ttaacttttttggttcattgtgtaagtgatgtatttaaactatatttacaat---aagatacattaattattctatgaatctaaaaggtcagctttttct 28605696  T
Q  185 tataataaggaccgga 200  Q
    ||||||||||||||||    
T  28605697 tataataaggaccgga 28605712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 30438861 - 30438754
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | || ||||| ||||||||||||||  | |||||||| ||||| |   ||||| |||||||| ||||| | ||||||| || | |||||    
T  30438861 ttaacttttttggtttattgtataagtgatgtatctagtctatatttacaataaaa---tacattaattattctatgaatctaaaaagtcaactttttct 30438765  T
Q  185 tataataagga 195  Q
    |||||||||||    
T  30438764 tataataagga 30438754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 2943327 - 2943386
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| |||| |||||| ||||||||| ||||||||||||||   |||||||||||    
T  2943327 atacatcaactatttaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 2943386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 12605652 - 12605754
Alignment:
Q  97 attcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggac 196  Q
    |||||||  ||||||||||||| |  | |||||||| |||||   ||||||| |||||||| ||||||| |||| || || | ||||||||||||| |||    
T  12605652 attcattacgtaagtgatgtatttagtctatatttacaataa---gatacattaattattccatgaacctaaaatgtcaactttttcttataataaagac 12605748  T
Q  197 cggagg 202  Q
    ||||||    
T  12605749 cggagg 12605754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 33127864 - 33127915
Alignment:
Q  136 taacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||||||| ||||||||||| || | ||||||| |||||||||||||    
T  33127864 taacaagatacattaattattcaataaatctaaaaagtcaattgtttcttat 33127915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 10145250 - 10145355
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||| |||||||  | ||||||||||||||  | |||||||| |||   ||||||||| |||||||  ||||||| ||||||| |||| ||| ||||||    
T  10145250 ttttttgattcatcatataagtgatgtatctagtctatatttacaat---aagatacattaattattttatgaacctaaaaagtcaatttttttttataa 10145346  T
Q  190 taaggaccg 198  Q
    ||| |||||    
T  10145347 taaagaccg 10145355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 12240213 - 12240167
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataat 136  Q
    ||||||| |||||||||||| ||||||||||  ||||||||||||||    
T  12240213 tttttaggttcattgtgtaaatgatgtatctaatttatatttataat 12240167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 28630821 - 28630759
Alignment:
Q  138 acaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccgga 200  Q
    ||||||||||||||||| ||||||||  |||||||| || | ||||||||||  |||||||||    
T  28630821 acaagatacatcaattactcaatgaataaaaaaagtcaaatttttcttataaataggaccgga 28630759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 33970436 - 33970394
Alignment:
Q  243 actccttaaacatgctaaataaaataattattctttcaaaatt 285  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||    
T  33970436 actctttaaatatgttaaataaaataattattctttcaaaatt 33970394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 8029568 - 8029507
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaa 204  Q
    |||||||| ||||||||||||   |||| || | |||||||||||||||| |||||||||||    
T  8029568 atacatcatttattcaatgaatttaaaatgtgatttgtttcttataataatgaccggaggaa 8029507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 20502205 - 20502089
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||| ||||| | |||||||||||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||| | ||||||| || | |||||    
T  20502205 ttaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataa---gatacattaattattctatgaatctaaaaagtcaactttttct 20502109  T
Q  185 tataataaggaccggaggaa 204  Q
    ||||||||||||||||||||    
T  20502108 tataataaggaccggaggaa 20502089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 73817 - 73928
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||||||||||||||||||| ||||||||||  | | | |||||||   | ||||| || ||||||||||||||||  |||||| |||||||||||||    
T  73817 actttttagattcattgtgtaaatgatgtatctactctttgtttataa---cgagatatattaattattcaatgaacctgaaaagtcaattgtttcttat 73913  T
Q  188 aataaggaccggagg 202  Q
    ||||| |||||||||    
T  73914 aataaagaccggagg 73928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 13932576 - 13932465
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||| ||||||||||||||||||  | | |||||   ||||| |||||||| |||||| ||||||||  ||||||| |||||||||||||    
T  13932576 actttttaggttcactgtgtaagtgatgtatctagtctctattt---ataacgagatacattaattatccaatgaacataaaaagtcaattgtttcttat 13932480  T
Q  188 aataaggaccggagg 202  Q
    || ||||||||||||    
T  13932479 aacaaggaccggagg 13932465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 20502170 - 20502237
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaataa 208  Q
    |||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20502170 agatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggaccggagggaataa 20502237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 13279001 - 13278894
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||||||||| ||||||||||||||||||||  |||||||||   ||||| |||| ||| || |||||||| |||| ||||| | |||||||||||||    
T  13279001 actttttagatttattgtgtaagtgatgtatctaatttatattt---ataacgagatgcattaactattcaataaacctaaaaaatcaattgtttcttat 13278905  T
Q  188 aataaggaccg 198  Q
    || || |||||    
T  13278904 aacaaagaccg 13278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 29874350 - 29874461
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||| | |||||||| ||||||||||||||  | ||||||| |||||| |   ||||| |||||||| ||||||| |||||||||| | ||||||||    
T  29874350 acttttttggttcattgtttaagtgatgtatctagtctatatttttaataaaa---tacattaattattctatgaacctaaaaagttaactttttcttat 29874446  T
Q  188 aataaggaccggagg 202  Q
    | |||||||||||||    
T  29874447 attaaggaccggagg 29874461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 32455172 - 32455283
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||| ||||||||||| |||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||||  |||| ||||| | ||||||||    
T  32455172 acttttttgattcattgtggaagtgatgtatctagtctatatttacaataa---gatacattaattattctatgaacttaaaatgttaactttttcttat 32455268  T
Q  188 aataaggaccggagg 202  Q
    ||||||||| |||||    
T  32455269 aataaggactggagg 32455283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 27600871 - 27600763
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||| ||||||||||||||||||| |||||  | |||||||| |||   ||||||||| |||||||| ||||||  ||||||| |||| ||||||||||    
T  27600871 ttttttgattcattgtgtaagtgatttatctaatctatatttacaat---aagatacattaattattctatgaacttaaaaagtcaatt-tttcttataa 27600776  T
Q  190 taaggaccggagg 202  Q
    ||| |||||||||    
T  27600775 taaagaccggagg 27600763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 29451998 - 29451897
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||  | |||||||| |||||   ||||||| |||||||| ||||| | ||||| | || | ||||||||||||||||||    
T  29451998 ttcattgtgtaagtgatgtatctagtatatatttacaataa---gatacattaattattctatgaatctaaaaaatcaactttttcttataataaggacc 29451902  T
Q  198 ggagg 202  Q
    |||||    
T  29451901 ggagg 29451897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 30132887 - 30132932
Alignment:
Q  157 caatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  30132887 caatgaatcaaaaaagttaattgtttcttataataaggaccggagg 30132932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 33247357 - 33247296
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||| |||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  33247357 agatatatcacttatagaatgaaccaaaaaagttaattgtctcttataataaggaccggagg 33247296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 38978825 - 38978886
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  38978825 agatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggatcggagg 38978886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 38978860 - 38978746
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||| ||||| | |||||||||||||||||||||||  | |||||||| |||||   |||| || |||||||| ||||| | ||||||| || | |||||    
T  38978860 ttaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataa---gatatattaattattctatgaatctaaaaagtcaactttttct 38978764  T
Q  185 tataataaggaccggagg 202  Q
    |||||||||||| |||||    
T  38978763 tataataaggactggagg 38978746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 5355656 - 5355555
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    ||||||||||||||||||||| |  |||||||||| |||   ||||||||| |||||||| ||||||| |||| ||||| | ||||||| ||||| || |    
T  5355656 ttcattgtgtaagtgatgtatttagtttatatttacaat---aagatacattaattattctatgaacctaaaatgttaactttttcttagaataaagatc 5355560  T
Q  198 ggagg 202  Q
    |||||    
T  5355559 ggagg 5355555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 7537126 - 7537025
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||  | ||||||||  ||||   ||||||| |||||||| || |||| || |||| |||| |||||||||||||| |||    
T  7537126 ttcattgtgtaagtgatgtatctagtatatatttacgataa---gatacattaattattctattaacctaagaagtcaattttttcttataataagaacc 7537030  T
Q  198 ggagg 202  Q
    |||||    
T  7537029 ggagg 7537025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 7537104 - 7537165
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||||||||| | |||||||| |||||||||||||||||||    
T  7537104 agatacatcacttacacaatgaaccaaaaaaatcaattgttttttataataaggaccggagg 7537165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 29002807 - 29002746
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  29002807 agatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataacaaggatcggagg 29002746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 29874382 - 29874321
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||||||||||| |||||||||||||| |||| ||||||||    
T  29874382 agatacatcacttaaacaatgaaccaaaaaagtcaattgtttcttatattaagaaccggagg 29874321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 10228187 - 10228091
Alignment:
Q  83 atttaactttttagattcattgtgtaagtgatgtatctcttttatatttataata-acaagatacatcaattattcaatgaaccaaaaaagttaatt 178  Q
    |||| ||||||| |||||||||| ||| ||||||||||| | ||||| |||  || |||||||||||||||| |||||| || | ||||||||||||    
T  10228187 atttgacttttttgattcattgtataaatgatgtatctcgtctatatatattctagacaagatacatcaattgttcaataaatctaaaaagttaatt 10228091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 1015219 - 1015160
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  1015219 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 1015160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 5355636 - 5355695
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||  |||||||| |||||||| || |||||||||||||||||||||||||    
T  5355636 atacatcacttacacaatgaactaaaaaagtcaactgtttcttataataaggaccggagg 5355695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 9630284 - 9630245
Alignment:
Q  157 caatgaaccaaaaaagttaattgtttcttataataaggac 196  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  9630284 caatgaaccaaaaaaattaattgtttcttataataaggac 9630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 19211378 - 19211284
Alignment:
Q  105 tgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||||||  | |||||||| ||   |||||||||| ||||| ||||||||   ||||||| ||  ||||||||||||||||||||||||    
T  19211378 tgtaagtgatgtatctagtctatatttacaa---caagatacattaattactcaatgaatataaaaagtcaaaagtttcttataataaggaccggagg 19211284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 22731322 - 22731263
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   |||||||||||    
T  22731322 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagg 22731263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 1138281 - 1138223
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggag 201  Q
    |||||| ||||||||||| || ||||||||| |||||||||||||||  ||||||||||    
T  1138281 atacattaattattcaataaatcaaaaaagtaaattgtttcttataaataggaccggag 1138223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 8680627 - 8680685
Alignment:
Q  144 tacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||| |||  ||||||||| ||||||| || |||||||||||||||||||||||||    
T  8680627 tacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagg 8680685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 11142448 - 11142494
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  11142448 atacatcaattattcaatgaatcaaaaaaatgaattgtttcttataa 11142494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 27488412 - 27488346
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||||||||||||||| |||||| | ||||| |||||| ||||||||||  ||||||||||| ||||    
T  27488412 agatacatcaattattgaatgaatctaaaaaattaattttttcttataaataggaccggaggtaata 27488346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 73849 - 73788
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||| | ||||||| |||||||| |||||||||||||||||||    
T  73849 agatacatcatttacacaatgaatctaaaaagtcaattgttttttataataaggaccggagg 73788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 15968395 - 15968440
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  15968395 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 15968440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 24173463 - 24173559
Alignment:
Q  98 ttcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggacc 197  Q
    |||||||||||||||||||||||  | |||||||  |||||   ||||||| |||||||| || |||  ||||||| || | ||||||||||||||||||    
T  24173463 ttcattgtgtaagtgatgtatctaatctatattttcaataa---gatacattaattattctataaacttaaaaagtcaactttttcttataataaggacc 24173559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 29031100 - 29031055
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  29031100 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttata 29031055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 29451976 - 29452036
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  ||||||||||||||| | ||||||||||||||||||||| ||||||    
T  29451976 agatacatcacttacacaatgaaccaaaaaa-tcaattgtttcttataataaggatcggagg 29452036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 13128306 - 13128211
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||||  |||||||||||||| ||||  | |||||||||||   | ||||| || ||||||||||| |||  |||||||||||| |||||||||    
T  13128306 tttttagattttttgtgtaagtgatgcatctagtctatatttataa---cgagatatattaattattcaataaacataaaaagttaattatttcttata 13128211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 449 - 496
Target Start/End: Original strand, 38594983 - 38595031
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaatttagcata 496  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  38594983 aaattgaaaattttgacattttaaaagaataattacttaatttagcata 38595031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 9630265 - 9630379
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||| ||||| | ||||||||||||||||| ||| |   ||||||||| |||   ||||||||| |||||||| ||||| | ||||| | |||| ||| |    
T  9630265 ttaatttttttggttcattgtgtaagtgatatatttagattatatttacaat---aagatacattaattattctatgaatctaaaaaatcaattttttgt 9630361  T
Q  185 tataataaggaccggagg 202  Q
    |||||||| |||||||||    
T  9630362 tataataaagaccggagg 9630379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 13789795 - 13789736
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||| |||| ||||||| ||||||||| || ||||||||||||  |||||||||||    
T  13789795 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagg 13789736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 30132881 - 30132846
Alignment:
Q  167 aaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||||| |||||||||||||||||||||||    
T  30132881 aaaaagttaattttttcttataataaggaccggagg 30132846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 35318591 - 35318654
Alignment:
Q  135 ataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccg 198  Q
    ||||| |||||||| ||||||||||| |||  ||||| | ||||||||||| ||||||||||||    
T  35318591 ataacgagatacattaattattcaataaacttaaaaaatcaattgtttcttgtaataaggaccg 35318654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 36434808 - 36434761
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatct 120  Q
    ||||| |||||||||||||||||||||||||  |||| ||||||||||    
T  36434808 tataagaaaaatttaactttttagattcattaagtaattgatgtatct 36434761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 13278969 - 13279031
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagga 203  Q
    |||||||||| |||  |||| || | ||||||| || ||||||||||||||||||||||||||    
T  13278969 agatacatcacttacacaataaatctaaaaagtcaactgtttcttataataaggaccggagga 13279031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 13932544 - 13932605
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  || |||||| ||||||| |||| |||||||||||||||||| ||||    
T  13932544 agatacatcacttacacagtgaacctaaaaagtcaattatttcttataataaggaccagagg 13932605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 24173485 - 24173424
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||  |||||||| |||||| | |||| ||||||||||||||||| |||||    
T  24173485 agatacatcacttacacaatgaactaaaaaaatcaattatttcttataataaggactggagg 24173424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 33247322 - 33247437
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttct 184  Q
    |||||||||| | |||||| | |||||||| |||||  | |||||||| |||||   |||| || ||||||| | |||||| ||||||| || | |||||    
T  33247322 ttaacttttttggttcattctataagtgatatatctagtctatatttacaataa---gatatattaattattta-tgaacctaaaaagtcaactttttct 33247417  T
Q  185 tataataaggaccggaggaa 204  Q
    ||||| ||||||||||||||    
T  33247418 tataacaaggaccggaggaa 33247437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 33970720 - 33970671
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataa 192  Q
    |||||||| |||| |||| ||  |||||||||||||||||||||||||||    
T  33970720 atacatcatttatacaataaaataaaaaagttaattgtttcttataataa 33970671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 25679 - 25613
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaaata 207  Q
    |||||||||| ||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  25679 agatacatcacttatataataaaccaaaaaagttaattgttttttataataaggaccggaggaaata 25613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 25644 - 25761
Alignment:
Q  85 ttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaacc-aaaaaagttaattgtttc 183  Q
    |||||||||| | || ||| | ||||||||||||||  | ||||||||||||||   ||||||| |||||||| ||||||  |||||||| || | ||||    
T  25644 ttaacttttttggtttattatataagtgatgtatctagtctatatttataataa---gatacattaattattctatgaacgtaaaaaagtcaactttttc 25740  T
Q  184 ttataataaggaccggaggaa 204  Q
    |||||||||||||||||||||    
T  25741 ttataataaggaccggaggaa 25761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 40226 - 40335
Alignment:
Q  90 tttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataa 189  Q
    ||||||| |||||||||||||||||||||||  | |||||||| ||   ||||||| || ||||| |||||||| | ||||||| ||  |||||||||||    
T  40226 tttttaggttcattgtgtaagtgatgtatctagtctatatttacaa---caagatatattaattactcaatgaatctaaaaagtcaaaagtttcttataa 40322  T
Q  190 taaggaccggagg 202  Q
    |||||||||||||    
T  40323 taaggaccggagg 40335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 1617 - 1676
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    ||||||||||||||||||||| | ||||| |||||| ||||||||||  | |||||||||    
T  1617 atacatcaattattcaatgaatctaaaaaattaattttttcttataaataagaccggagg 1676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 3273 - 3381
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||  |||||||||||||||||||||||  | ||||||||||    | | ||||||  |||||||||| |||  |||||||||||||||||||||    
T  3273 actttttatgttcattgtgtaagtgatgtatctagtctatatttatat---cgaaatacattgattattcaattaacttaaaaagttaattgtttcttat 3369  T
Q  188 aataaggaccgg 199  Q
    ||||||||||||    
T  3370 aataaggaccgg 3381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 3305 - 3251
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataagga 195  Q
    |||||||||| |||  ||||||||  ||||||| |||||||||||||||||||||    
T  3305 agatacatcacttacacaatgaacataaaaagtcaattgtttcttataataagga 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 26619 - 26730
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    ||||||||| |||||| ||||||||||||||||  | |||||||| ||   |||||||||| ||||| |||||||| | ||||| | ||  |||||||||    
T  26619 actttttaggttcattatgtaagtgatgtatctagtctatatttacaa---caagatacattaattactcaatgaatctaaaaaatcaaaagtttcttat 26715  T
Q  188 aataaggaccggagg 202  Q
    |||||||||||||||    
T  26716 aataaggaccggagg 26730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 26651 - 26590
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| |||   |||||||| ||||||| |||  |||||||||||||||||||||||    
T  26651 agatacatcacttacataatgaacctaaaaagtcaatcctttcttataataaggaccggagg 26590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 112859 - 112967
Alignment:
Q  91 ttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttataat 190  Q
    |||||| ||||||||  || ||||||||||  | |||||||||||   |||||||||| ||||||||||| || | ||||||| |||||||||||||  |    
T  112859 ttttaggttcattgtacaaatgatgtatctaatctatatttataa---caagatacattaattattcaataaatctaaaaagtcaattgtttcttatgtt 112955  T
Q  191 aaggaccggagg 202  Q
    ||||||||||||    
T  112956 aaggaccggagg 112967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 112888 - 112827
Alignment:
Q  141 agatacatcaattattcaatgaaccaaaaaagttaattgtttcttataataaggaccggagg 202  Q
    |||||||||| || | ||||||||| |||| || ||||||||||||||||||||||| ||||    
T  112888 agatacatcatttgtacaatgaacctaaaacgtcaattgtttcttataataaggacccgagg 112827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 12876 - 12755
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||| | ||||||||||||||  | || ||||   ||||| |||||||||| |||  ||||||||| ||||||    
T  12876 tataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacattt---ataacgagatacatcacttaaacaatgaacctaaaaag 12780  T
Q  173 ttaattgtttcttataataaggacc 197  Q
    | || | ||||||||||||||||||    
T  12779 tcaaatatttcttataataaggacc 12755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 12764 - 12888
Alignment:
Q  73 tataacaaaaatttaactttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaag 172  Q
    ||||| ||| |||| ||||||||| |||||||| ||||||||||||||| || |||  | ||   || |||||||||| |||   |||||||| ||||||    
T  12764 tataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgtt-ataaatgtag--actagatacatcacttaaataatgaacctaaaaag 12860  T
Q  173 ttaattgtttcttataataaggaccgga 200  Q
    | || |||||||||||||||||||||||    
T  12861 tcaaatgtttcttataataaggaccgga 12888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 5447 - 5549
Alignment:
Q  88 actttttagattcattgtgtaagtgatgtatctcttttatatttataataacaagatacatcaattattcaatgaaccaaaaaagttaattgtttcttat 187  Q
    |||||||| ||||||||||||||||| |||||   | ||||||||| |   ||  |||||| |||||||||||||| | ||||||| |||| ||||||||    
T  5447 actttttaaattcattgtgtaagtgaagtatcgagtctatatttatta---cagtatacattaattattcaatgaatctaaaaagtcaattatttcttat 5543  T
Q  188 aataag 193  Q
    ||||||    
T  5544 aataag 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 449 - 495
Target Start/End: Complemental strand, 26755 - 26708
Alignment:
Q  449 aaattgaaaactttgacattttaaaa-aataattatttaatttagcat 495  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  26755 aaattgaaaactttgacattttaaaataataattacttaatttagcat 26708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 7209 - 7254
Alignment:
Q  143 atacatcaattattcaatgaaccaaaaaagttaattgtttcttata 188  Q
    ||||||||| |||| |||||| ||||||||| ||||||||||||||    
T  7209 atacatcaactatttaatgaatcaaaaaagtaaattgtttcttata 7254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University