View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15666_low_19 (Length: 309)
Name: NF15666_low_19
Description: NF15666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15666_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 39246973 - 39247205
Alignment:
| Q |
15 |
agaatatacataatattggtgatgttgctgatgccactcacgaggatgcaaatcaacatagattatcaccagggggaccagatcctcatcatcatgcagg |
114 |
Q |
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| T |
39246973 |
agaatatacataatattggtgatgttgctgatgccactcacgaggatgcaaatcaacatagattatcaccagggggaccagatcctcatcatcatgcagg |
39247072 |
T |
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| Q |
115 |
tccacaaaacaagtagctatatatataactctctcgttatataatagaaatattttccaaaaagttgggtagtcaacttatcagttatcagccaccgttg |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39247073 |
tccacaaaacaagtagctatatatataactctctcgttatataatagaaatattttccaaaaagttgggtagtcaacttatcagttatcagccactgttg |
39247172 |
T |
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| Q |
215 |
atttgttggtatgtcttaagaacagaactagta |
247 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
39247173 |
atttgttggtatgtcttaagaacagaactagta |
39247205 |
T |
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