View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15667_high_12 (Length: 355)

Name: NF15667_high_12
Description: NF15667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15667_high_12
NF15667_high_12
[»] chr8 (42 HSPs)
chr8 (188-351)||(22197563-22197725)
chr8 (17-108)||(22197373-22197464)
chr8 (295-355)||(5813653-5813713)
chr8 (295-355)||(18407780-18407840)
chr8 (295-355)||(29510231-29510291)
chr8 (296-355)||(8343388-8343447)
chr8 (297-355)||(22652048-22652106)
chr8 (297-353)||(11803333-11803389)
chr8 (295-353)||(949203-949261)
chr8 (297-355)||(6065586-6065644)
chr8 (297-343)||(15816058-15816104)
chr8 (297-355)||(21465484-21465542)
chr8 (309-355)||(22943301-22943347)
chr8 (297-355)||(26902104-26902162)
chr8 (297-355)||(29447516-29447574)
chr8 (297-355)||(36450694-36450752)
chr8 (296-345)||(8343038-8343087)
chr8 (297-342)||(17751730-17751775)
chr8 (297-342)||(17760717-17760762)
chr8 (294-355)||(40332252-40332313)
chr8 (295-355)||(4673352-4673412)
chr8 (295-347)||(13397620-13397672)
chr8 (297-355)||(12570438-12570496)
chr8 (297-355)||(12570664-12570722)
chr8 (297-355)||(14134760-14134818)
chr8 (295-345)||(27213596-27213646)
chr8 (297-355)||(31557057-31557115)
chr8 (297-355)||(34450961-34451019)
chr8 (299-345)||(44067598-44067644)
chr8 (299-352)||(926730-926783)
chr8 (298-347)||(24205749-24205798)
chr8 (298-355)||(29447040-29447097)
chr8 (296-345)||(30067967-30068016)
chr8 (297-330)||(31514940-31514973)
chr8 (299-355)||(3025612-3025668)
chr8 (295-347)||(13403175-13403227)
chr8 (297-341)||(13436910-13436954)
chr8 (302-354)||(14639735-14639787)
chr8 (299-339)||(16987990-16988030)
chr8 (303-355)||(38079060-38079112)
chr8 (297-345)||(39820500-39820547)
chr8 (297-345)||(40064033-40064081)
[»] chr7 (34 HSPs)
chr7 (295-355)||(5409769-5409829)
chr7 (297-355)||(598269-598327)
chr7 (297-355)||(21880213-21880271)
chr7 (297-355)||(43027404-43027462)
chr7 (295-355)||(9778566-9778626)
chr7 (297-355)||(24339714-24339772)
chr7 (297-355)||(29763129-29763187)
chr7 (301-351)||(40287306-40287356)
chr7 (304-345)||(18215144-18215185)
chr7 (296-348)||(1401091-1401143)
chr7 (297-345)||(6490787-6490835)
chr7 (296-355)||(15680870-15680929)
chr7 (297-355)||(32093954-32094013)
chr7 (298-345)||(32287404-32287451)
chr7 (297-355)||(21864869-21864927)
chr7 (294-355)||(7438778-7438839)
chr7 (294-355)||(33994273-33994334)
chr7 (297-345)||(1433530-1433578)
chr7 (297-345)||(7133212-7133260)
chr7 (297-345)||(14729774-14729822)
chr7 (294-330)||(35862037-35862073)
chr7 (297-355)||(2334321-2334379)
chr7 (297-351)||(17852065-17852119)
chr7 (297-355)||(25822727-25822785)
chr7 (310-355)||(7973076-7973121)
chr7 (300-341)||(8842282-8842323)
chr7 (302-355)||(13770757-13770810)
chr7 (298-355)||(20545185-20545242)
chr7 (298-355)||(20549852-20549909)
chr7 (297-330)||(30813883-30813916)
chr7 (298-355)||(32308192-32308249)
chr7 (297-345)||(21568561-21568609)
chr7 (297-345)||(24105749-24105797)
chr7 (297-345)||(40131939-40131987)
[»] chr6 (36 HSPs)
chr6 (295-355)||(10339052-10339112)
chr6 (295-355)||(4878004-4878063)
chr6 (295-355)||(8365446-8365506)
chr6 (295-355)||(8776906-8776966)
chr6 (295-355)||(17327588-17327648)
chr6 (300-355)||(32978842-32978897)
chr6 (297-355)||(28152159-28152217)
chr6 (297-355)||(34595195-34595253)
chr6 (295-352)||(12236723-12236780)
chr6 (298-355)||(31384991-31385048)
chr6 (295-355)||(18367908-18367968)
chr6 (298-345)||(31959221-31959268)
chr6 (296-330)||(426477-426511)
chr6 (297-343)||(7378052-7378098)
chr6 (297-355)||(16766769-16766827)
chr6 (300-345)||(8389411-8389456)
chr6 (300-345)||(9025448-9025493)
chr6 (297-350)||(10770607-10770660)
chr6 (298-355)||(17841530-17841587)
chr6 (297-345)||(7248440-7248488)
chr6 (297-345)||(7938171-7938219)
chr6 (297-345)||(9107299-9107347)
chr6 (295-355)||(28715356-28715416)
chr6 (297-353)||(32511606-32511662)
chr6 (297-345)||(34894968-34895016)
chr6 (299-330)||(5569835-5569866)
chr6 (297-355)||(3209460-3209518)
chr6 (297-355)||(8714052-8714110)
chr6 (310-355)||(3398684-3398729)
chr6 (297-330)||(7723199-7723232)
chr6 (297-346)||(13360313-13360362)
chr6 (299-340)||(26178620-26178661)
chr6 (297-326)||(28919488-28919517)
chr6 (299-355)||(5000557-5000613)
chr6 (294-330)||(10649374-10649410)
chr6 (297-345)||(25207811-25207859)
[»] chr3 (37 HSPs)
chr3 (295-355)||(40993273-40993333)
chr3 (297-355)||(20503526-20503584)
chr3 (297-355)||(27505312-27505370)
chr3 (297-355)||(55401136-55401194)
chr3 (294-355)||(49651713-49651774)
chr3 (299-355)||(4987222-4987278)
chr3 (297-345)||(11610580-11610628)
chr3 (297-345)||(34185052-34185100)
chr3 (295-355)||(41961577-41961637)
chr3 (295-345)||(40052383-40052433)
chr3 (298-355)||(15999951-16000008)
chr3 (298-350)||(8789489-8789541)
chr3 (297-353)||(18427012-18427068)
chr3 (304-355)||(3631745-3631796)
chr3 (295-340)||(14979225-14979270)
chr3 (298-355)||(32804485-32804542)
chr3 (297-341)||(2408590-2408634)
chr3 (301-341)||(14829776-14829816)
chr3 (295-355)||(28812587-28812647)
chr3 (299-355)||(28918064-28918120)
chr3 (299-355)||(29508511-29508567)
chr3 (302-345)||(1509638-1509681)
chr3 (297-355)||(5440967-5441026)
chr3 (297-355)||(10955013-10955074)
chr3 (297-351)||(16789088-16789141)
chr3 (299-345)||(24204983-24205029)
chr3 (299-345)||(25775578-25775624)
chr3 (298-340)||(34910393-34910435)
chr3 (295-345)||(52369858-52369908)
chr3 (297-330)||(4990912-4990945)
chr3 (297-330)||(8842415-8842448)
chr3 (298-355)||(14216964-14217021)
chr3 (298-355)||(14223093-14223150)
chr3 (297-345)||(3163971-3164019)
chr3 (299-355)||(13806308-13806363)
chr3 (297-345)||(25074866-25074914)
chr3 (295-355)||(26492143-26492203)
[»] chr2 (32 HSPs)
chr2 (299-355)||(2438661-2438717)
chr2 (297-355)||(18840953-18841011)
chr2 (297-355)||(11223793-11223850)
chr2 (297-355)||(15907851-15907909)
chr2 (297-355)||(26769583-26769641)
chr2 (295-345)||(37419825-37419875)
chr2 (297-355)||(35056940-35056998)
chr2 (297-355)||(38117099-38117157)
chr2 (297-354)||(21782744-21782801)
chr2 (297-341)||(44635568-44635612)
chr2 (297-351)||(37559042-37559096)
chr2 (297-355)||(42511322-42511380)
chr2 (298-355)||(28596530-28596587)
chr2 (296-355)||(15972934-15972993)
chr2 (302-345)||(23058389-23058432)
chr2 (296-346)||(18622672-18622722)
chr2 (299-345)||(19942336-19942382)
chr2 (297-355)||(24009356-24009414)
chr2 (297-355)||(27084330-27084388)
chr2 (297-355)||(30404790-30404848)
chr2 (297-355)||(30717459-30717517)
chr2 (297-327)||(39323327-39323357)
chr2 (299-352)||(15657939-15657992)
chr2 (298-355)||(27286222-27286279)
chr2 (298-355)||(44860392-44860449)
chr2 (296-352)||(6180789-6180845)
chr2 (297-345)||(10535685-10535733)
chr2 (297-345)||(12748738-12748786)
chr2 (294-330)||(20539629-20539665)
chr2 (297-325)||(24975255-24975283)
chr2 (297-345)||(32749754-32749802)
chr2 (299-355)||(36756275-36756331)
[»] chr1 (48 HSPs)
chr1 (296-355)||(1815318-1815377)
chr1 (296-355)||(6427536-6427595)
chr1 (294-355)||(9828116-9828177)
chr1 (294-355)||(40917821-40917882)
chr1 (297-355)||(22515827-22515885)
chr1 (297-355)||(47989569-47989627)
chr1 (299-355)||(1486646-1486702)
chr1 (296-355)||(31694638-31694697)
chr1 (296-355)||(37598892-37598951)
chr1 (297-355)||(5944355-5944413)
chr1 (297-343)||(16812629-16812675)
chr1 (299-345)||(42359391-42359437)
chr1 (298-355)||(40258874-40258931)
chr1 (297-345)||(2218299-2218347)
chr1 (295-355)||(5898204-5898264)
chr1 (295-343)||(21365990-21366038)
chr1 (294-345)||(29144317-29144368)
chr1 (299-345)||(16297223-16297269)
chr1 (295-341)||(22881565-22881611)
chr1 (295-341)||(30359440-30359486)
chr1 (297-355)||(46348323-46348381)
chr1 (295-340)||(22947806-22947851)
chr1 (296-345)||(46940747-46940796)
chr1 (297-345)||(17831462-17831510)
chr1 (298-345)||(10233327-10233374)
chr1 (297-352)||(18556385-18556440)
chr1 (297-340)||(27965940-27965983)
chr1 (295-345)||(15765829-15765879)
chr1 (296-330)||(17705545-17705579)
chr1 (297-355)||(18337390-18337448)
chr1 (297-355)||(32461393-32461451)
chr1 (297-355)||(38078601-38078659)
chr1 (298-327)||(5927281-5927310)
chr1 (299-352)||(17778617-17778670)
chr1 (296-345)||(20157283-20157332)
chr1 (302-355)||(26830648-26830701)
chr1 (296-345)||(34741918-34741966)
chr1 (297-330)||(35702542-35702575)
chr1 (297-342)||(38075909-38075954)
chr1 (297-345)||(113364-113412)
chr1 (297-345)||(1704935-1704983)
chr1 (296-340)||(7918153-7918197)
chr1 (295-351)||(9690211-9690267)
chr1 (295-355)||(18471356-18471416)
chr1 (295-355)||(25934688-25934748)
chr1 (297-341)||(36878541-36878585)
chr1 (301-345)||(48040418-48040462)
chr1 (295-355)||(51410086-51410146)
[»] scaffold0793 (1 HSPs)
scaffold0793 (297-355)||(4821-4879)
[»] chr4 (51 HSPs)
chr4 (297-355)||(715545-715603)
chr4 (297-355)||(752871-752929)
chr4 (297-355)||(23292926-23292984)
chr4 (294-345)||(11596294-11596345)
chr4 (295-345)||(18513173-18513223)
chr4 (297-355)||(29205529-29205587)
chr4 (295-355)||(3064866-3064926)
chr4 (297-345)||(24343584-24343632)
chr4 (297-355)||(28964188-28964246)
chr4 (297-355)||(34306744-34306802)
chr4 (298-355)||(3947702-3947759)
chr4 (298-355)||(14465006-14465063)
chr4 (298-355)||(30982808-30982865)
chr4 (295-355)||(19482740-19482800)
chr4 (295-343)||(53381528-53381576)
chr4 (302-345)||(3712458-3712501)
chr4 (300-351)||(28084589-28084640)
chr4 (297-355)||(8423658-8423716)
chr4 (297-355)||(18966570-18966628)
chr4 (297-355)||(35157925-35157983)
chr4 (297-355)||(36635391-36635449)
chr4 (294-355)||(36409441-36409502)
chr4 (294-355)||(36423607-36423668)
chr4 (296-336)||(5775303-5775343)
chr4 (295-355)||(16073455-16073515)
chr4 (295-355)||(24613628-24613688)
chr4 (295-355)||(35161097-35161157)
chr4 (296-340)||(40784029-40784073)
chr4 (298-345)||(5922532-5922579)
chr4 (299-354)||(28000672-28000727)
chr4 (297-344)||(37203324-37203371)
chr4 (298-345)||(40965342-40965389)
chr4 (297-355)||(2361915-2361973)
chr4 (297-351)||(12884347-12884401)
chr4 (297-343)||(12895214-12895260)
chr4 (295-345)||(16184902-16184952)
chr4 (299-353)||(19312409-19312463)
chr4 (299-345)||(22440559-22440605)
chr4 (301-355)||(27706110-27706164)
chr4 (295-329)||(42015047-42015081)
chr4 (297-351)||(42640589-42640643)
chr4 (297-355)||(49431087-49431145)
chr4 (296-345)||(944601-944650)
chr4 (296-345)||(30094084-30094133)
chr4 (299-355)||(4157210-4157266)
chr4 (299-355)||(4157497-4157553)
chr4 (298-330)||(4383452-4383484)
chr4 (295-355)||(22234817-22234877)
chr4 (296-336)||(30299009-30299049)
chr4 (296-336)||(30327877-30327917)
chr4 (297-353)||(47264060-47264116)
[»] scaffold0053 (1 HSPs)
scaffold0053 (297-355)||(8859-8917)
[»] scaffold0003 (2 HSPs)
scaffold0003 (297-355)||(241666-241724)
scaffold0003 (295-345)||(236912-236962)
[»] chr5 (36 HSPs)
chr5 (297-355)||(21194063-21194121)
chr5 (297-345)||(19820328-19820376)
chr5 (297-355)||(7677777-7677835)
chr5 (296-350)||(14873588-14873642)
chr5 (309-355)||(15382546-15382592)
chr5 (297-355)||(17123109-17123166)
chr5 (297-355)||(21576685-21576743)
chr5 (295-349)||(38464311-38464365)
chr5 (294-355)||(43564942-43565003)
chr5 (299-355)||(21190998-21191054)
chr5 (297-353)||(32766872-32766928)
chr5 (300-355)||(39268541-39268596)
chr5 (297-355)||(31084389-31084447)
chr5 (297-343)||(39698625-39698671)
chr5 (297-355)||(42893421-42893479)
chr5 (305-345)||(17088362-17088402)
chr5 (297-345)||(35017114-35017162)
chr5 (299-355)||(43001866-43001922)
chr5 (291-345)||(2436982-2437036)
chr5 (296-330)||(10298636-10298670)
chr5 (297-355)||(16304366-16304424)
chr5 (297-355)||(21522822-21522880)
chr5 (297-355)||(21533388-21533446)
chr5 (297-355)||(30098398-30098456)
chr5 (298-355)||(21542102-21542159)
chr5 (297-330)||(22423764-22423797)
chr5 (295-340)||(40000491-40000536)
chr5 (297-345)||(2419938-2419986)
chr5 (295-355)||(11686010-11686070)
chr5 (297-345)||(17593663-17593711)
chr5 (299-355)||(19579773-19579829)
chr5 (299-355)||(23015926-23015982)
chr5 (295-355)||(28588612-28588672)
chr5 (299-355)||(30502330-30502386)
chr5 (299-355)||(30542673-30542729)
chr5 (296-344)||(37328774-37328822)
[»] scaffold0004 (1 HSPs)
scaffold0004 (298-355)||(92883-92940)
[»] scaffold0136 (1 HSPs)
scaffold0136 (296-355)||(3777-3836)
[»] scaffold0652 (1 HSPs)
scaffold0652 (298-355)||(403-460)
[»] scaffold0380 (1 HSPs)
scaffold0380 (295-355)||(8662-8722)
[»] scaffold0021 (1 HSPs)
scaffold0021 (295-355)||(2976-3036)
[»] scaffold0019 (1 HSPs)
scaffold0019 (295-355)||(71797-71857)
[»] scaffold0361 (1 HSPs)
scaffold0361 (297-355)||(14588-14646)
[»] scaffold0086 (1 HSPs)
scaffold0086 (297-355)||(3000-3058)
[»] scaffold0475 (1 HSPs)
scaffold0475 (296-340)||(3384-3428)
[»] scaffold0020 (1 HSPs)
scaffold0020 (297-345)||(135263-135311)
[»] scaffold0450 (1 HSPs)
scaffold0450 (297-355)||(8564-8622)
[»] scaffold0027 (1 HSPs)
scaffold0027 (297-330)||(46743-46776)
[»] scaffold0011 (1 HSPs)
scaffold0011 (297-346)||(17542-17591)
[»] scaffold0036 (1 HSPs)
scaffold0036 (299-355)||(9678-9734)


Alignment Details
Target: chr8 (Bit Score: 128; Significance: 4e-66; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 188 - 351
Target Start/End: Original strand, 22197563 - 22197725
Alignment:
Q  188 aaaccataaccttaaggtctcacggtctaatattttgtcgaatttttaaaacattcgattttatgtaaatgtgagctaaaataacagatcataggaaaac 287  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  22197563 aaaccataaccttaaggtctcacggtctaatattttgtccaatttttaaaacattag-ttttatgtaaatgtgagctaaaaaaacagatcataggaaaac 22197661  T
Q  288 atgaccgacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    |||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  22197662 atgaccaacctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtc 22197725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 22197373 - 22197464
Alignment:
Q  17 aatgggaatcggccaattcgccggtattaaatccgctggttgatttaatctcagttatacaataggttgaaccagttgaagtgactcatctg 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22197373 aatgggaatcggccaattcgccggtattaaatccgctggttgatttaatctcagttatacaataggttgaaccagttgaagtgactcgtctg 22197464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 5813713 - 5813653
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||| ||||||||||||||||||  |||||||||| |||||||||||||| |||||||||    
T  5813713 acctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgt 5813653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 18407840 - 18407780
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||||  |||||||||| ||  ||||||||||||||||||||    
T  18407840 acctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgt 18407780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 29510231 - 29510291
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||||| | |||||||    
T  29510231 acctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgt 29510291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 8343447 - 8343388
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||||||| || ||||||||||| |||||||||||||| |||||||||    
T  8343447 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 8343388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 22652106 - 22652048
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||||||  ||||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgt 22652048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 11803389 - 11803333
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgt 353  Q
    |||||||||||||||||||||| |||||| ||||  || ||||||||||||||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgt 11803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 949203 - 949261
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgt 353  Q
    |||||||||||||| ||| ||||||||||||| ||| | |||||||||| |||||||||    
T  949203 acctatgaagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtcgt 949261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 6065586 - 6065644
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||   |||| |||||  |||||||||||||||||||||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgt 6065644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 15816058 - 15816104
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcgga 343  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcgga 15816104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 21465542 - 21465484
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||| |||||||||  ||| |||| ||||| |||||||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgt 21465484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 22943301 - 22943347
Alignment:
Q  309 gacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 22943347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 26902104 - 26902162
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||||| ||||||| ||| ||| | |||| |||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgt 26902162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 29447574 - 29447516
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| |||||| | || ||||||||||||||  ||||||||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgt 29447516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 36450694 - 36450752
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||| |||||||||| ||||||||||| || ||||||||||| | |||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgt 36450752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 8343087 - 8343038
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||| ||||||| || ||||||||||| ||||||||||||||    
T  8343087 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggaca 8343038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 17751775 - 17751730
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcgg 342  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 17760762 - 17760717
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcgg 342  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 40332313 - 40332252
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||| |||| |||||||||||||| ||||||||| | |||||||| ||||| |||||||||    
T  40332313 gacctgtgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgt 40332252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 4673352 - 4673412
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||| |||||||||  |||||||||||  ||||||||||| ||| |||||||    
T  4673352 acctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgt 4673412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 13397672 - 13397620
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatg 347  Q
    |||||||||||||||||||||||   |||||||||| | ||||||||||||||    
T  13397672 acctatgaagcacggacactccttgaattaggcgtgtctcggtgtcggacatg 13397620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 12570438 - 12570496
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||| ||||||||||| || |||||||||||||| || ||||||||||| |||| ||||    
T  12570438 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgt 12570496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 12570664 - 12570722
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||| ||||||||||| || |||||||||||||| || ||||||||||| |||| ||||    
T  12570664 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgt 12570722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 14134818 - 14134760
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||| ||||||||||||||  |||||||||| || |||| |||||| |||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgt 14134760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 27213646 - 27213596
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||||| ||||    
T  27213646 acctatgaagcacggacacttctcggattagccgtgtcccggtgtccgaca 27213596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 31557115 - 31557057
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||| ||| |||||| |||  ||||||||||| || |||||||||||||||||||||    
T  31557115 ctatgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgt 31557057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 34450961 - 34451019
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||  ||| ||||||| ||| ||||| |||| |||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 34451019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 44067644 - 44067598
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||  |||||||||| || |||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggaca 44067598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 926730 - 926783
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcg 352  Q
    |||||||||||||||||||| ||| | || || |||||||||||||| ||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcg 926783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 347
Target Start/End: Original strand, 24205749 - 24205798
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatg 347  Q
    |||||| |||||||||||||| |||||||||||  |||||||| ||||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagacatg 24205798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 29447040 - 29447097
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||  ||||||||||| || |||||| ||||  ||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgt 29447097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 30067967 - 30068016
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||| || ||||||| ||| ||| ||||||||||    
T  30067967 cctatgaagcacggacactcatcggattaggtgtgtcccagtgtcggaca 30068016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 31514973 - 31514940
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||| |||||||||||    
T  31514973 ctatgaagcacggacactcctcggattaggcgtg 31514940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 3025668 - 3025612
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||| |||||| |||| | | ||||| |||| |||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgt 3025612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 13403227 - 13403175
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatg 347  Q
    |||||||||||||||||||||||   |||| ||||| | ||||||||||||||    
T  13403227 acctatgaagcacggacactccttgaattaagcgtgtctcggtgtcggacatg 13403175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 13436910 - 13436954
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcg 341  Q
    ||||||||||| |||||||||  ||||||||||| ||||||||||    
T  13436910 ctatgaagcacagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 14639735 - 14639787
Alignment:
Q  302 aagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtg 354  Q
    |||||| || ||||||  |||||||| || |||||||||||||||||||||||    
T  14639735 aagcacagatactccttggattaggcatgtcccggtgtcggacatgtgtcgtg 14639787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgt 339  Q
    |||||||||||||||||||| ||||||| ||| ||||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 38079112 - 38079060
Alignment:
Q  303 agcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||  ||||||||  |||| |||||||||||||||| |||||||    
T  38079112 agcacggacacttttcagattatacgtggcccggtgtcggacatgcgtcgtgt 38079060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 39820547 - 39820500
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||| ||| ||||||||||| ||| ||||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggaca 39820500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 40064081 - 40064033
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||| |||||||||||||||| ||||||  ||| ||||||||||||||    
T  40064081 ctatgtagcacggacactcctcggattagatgtgtcccggtgtcggaca 40064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 5409769 - 5409829
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  5409769 acctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 5409829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 598327 - 598269
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 598269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 21880271 - 21880213
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||| ||| ||||||||||| || |||||||||||||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgt 21880213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 43027404 - 43027462
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 43027462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 9778626 - 9778566
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||| |||| ||||    
T  9778626 acctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgt 9778566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 24339772 - 24339714
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||||| | |||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgt 24339714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| || | ||||||||| |||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  301 gaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    |||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 18215144 - 18215185
Alignment:
Q  304 gcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggaca 18215185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 1401143 - 1401091
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgt 348  Q
    ||||||||||| ||||||||||||||||||| ||| |||| ||||||||||||    
T  1401143 cctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggacatgt 1401091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 6490835 - 6490787
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggaca 6490787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 15680929 - 15680870
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||  ||||| |||| | |||||||||||| |||||||||    
T  15680929 cctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgt 15680870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 32093954 - 32094013
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg-acccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||||||||| |||||||||||  |||||||||||||| |||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgt 32094013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 32287404 - 32287451
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 32287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 21864927 - 21864869
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||| ||||||||||  ||||| |||| |||||||||||||| |||||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgt 21864869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 7438839 - 7438778
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||||   |||||||||| ||  |||||| |||||||||||||    
T  7438839 gacctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgt 7438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 33994334 - 33994273
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| |||| ||||||||  ||||||||||| | |||||| |||||||||||||||    
T  33994334 gacctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgt 33994273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 1433578 - 1433530
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||| |||||| |||| || |||||||||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggaca 1433530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 7133212 - 7133260
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||| |||||||||||||| ||| ||| ||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggaca 7133260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 14729822 - 14729774
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||| ||||||||||||| ||||| ||||| ||||||||||||||    
T  14729822 ctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggaca 14729774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 35862073 - 35862037
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtg 330  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35862073 gacctatgaagcacggacactcctcggattaggcgtg 35862037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 2334379 - 2334321
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||| |||||||||||||| |||||| ||||   | ||||||||||||||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgt 2334321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 17852119 - 17852065
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    ||||||||||||||||||||||  |||||| ||| | |||||||||||| |||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtc 17852065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 25822785 - 25822727
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||| ||||||||||||| ||||||||| || |||| |||| |||| |||||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgt 25822727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 7973076 - 7973121
Alignment:
Q  310 acactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| ||||| |||| |||| |||||||||||||||||||    
T  7973076 acactcctcatattagacgtgtcccgatgtcggacatgtgtcgtgt 7973121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 8842282 - 8842323
Alignment:
Q  300 tgaagcacggacactcctcagattaggcgtgacccggtgtcg 341  Q
    ||||||||||||||||||  ||||||||||| ||||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 13770810 - 13770757
Alignment:
Q  302 aagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||| || |||||||||||  ||||||||||||| |||| ||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgt 13770757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 20545185 - 20545242
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| ||||||||||  ||||  |||| ||| ||||||||||||||||||||    
T  20545185 tatgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgt 20545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 20549909 - 20549852
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| |||||||| ||||||||||| | |  |||||||||||||| ||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgt 20549852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 30813916 - 30813883
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||| |||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtg 30813883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 32308249 - 32308192
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||| | ||||||||| ||||||  ||| | ||||||||||||||||||||||    
T  32308249 tatgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgt 32308192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 21568561 - 21568609
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||| |||||||||||||||| || || ||||||||| ||||    
T  21568561 ctatgaagcacagacactcctcagattaagcatgtcccggtgtccgaca 21568609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 24105797 - 24105749
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||  ||||||||| | ||||||||| ||||||||||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggaca 24105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 40131939 - 40131987
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||| |||||||||| |||||| |||| ||| ||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggaca 40131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 10339052 - 10339112
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  10339052 acctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgt 10339112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 4878063 - 4878004
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||| |||||||||||  || ||||||||||||||||||||    
T  4878063 acctatgaagcacggacactcctcggattaggcgtg-tcctgtgtcggacatgtgtcgtgt 4878004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 8365446 - 8365506
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||| ||||||| ||||||||||| ||| |||||||||| |||||||||    
T  8365446 acctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgt 8365506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 8776906 - 8776966
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||| ||||||| ||| | |||||||||||| |||||||||    
T  8776906 acctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgt 8776966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 17327588 - 17327648
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||| |||| |||||||||    
T  17327588 acctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgt 17327648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 32978842 - 32978897
Alignment:
Q  300 tgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||  |||||| |||| ||||||||||||||||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgt 32978897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 28152217 - 28152159
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||||||||| |||||||| || |||||||||||||| |||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgt 28152159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 34595253 - 34595195
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||| |||| |||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgt 34595195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 12236780 - 12236723
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcg 352  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||| || ||||||||||    
T  12236780 acctatgaagcacgaacactcctcaggttaggcgtgtcccggtgccgaacatgtgtcg 12236723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 31385048 - 31384991
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||  ||||||||||| |||||||| ||||| |||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgt 31384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 18367968 - 18367908
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||  ||| ||||||| ||| ||||| ||||||||||||||    
T  18367968 acctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgt 18367908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 31959268 - 31959221
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 31959221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 330
Target Start/End: Original strand, 426477 - 426511
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||||||||||||||||    
T  426477 cctatgaagcacggacactcctcagattaggcgtg 426511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 7378098 - 7378052
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcgga 343  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcgga 7378052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 16766827 - 16766769
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||| || || ||||||||||| |||||||||||||| |||| ||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgt 16766769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 8389411 - 8389456
Alignment:
Q  300 tgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 8389456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 9025448 - 9025493
Alignment:
Q  300 tgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggaca 9025493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 10770607 - 10770660
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgt 350  Q
    ||||||||||||||||||||||||||||||| || |||||  ||||||| ||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgt 10770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 17841530 - 17841587
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||| ||||||||||| | | ||||||||||  ||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgt 17841587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 7248488 - 7248440
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||| |||| | |||| ||||||||||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggaca 7248440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 7938219 - 7938171
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||| ||| ||||||| | ||||||||||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggaca 7938171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 9107299 - 9107347
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||| |||||||| ||||||| ||| ||||||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggaca 9107347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 28715416 - 28715356
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||| ||||| |||  |||||||||| |||||||||| ||| |||||||||    
T  28715416 acctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgt 28715356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 32511606 - 32511662
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgt 353  Q
    |||||||||||||||||||||| |||||||||||  ||| |||| ||||| ||||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgt 32511662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 34894968 - 34895016
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||||||||||    
T  34894968 ctatgaagcacggacactcctcatattaggtgtgtccctgtgtcggaca 34895016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 330
Target Start/End: Complemental strand, 5569866 - 5569835
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtg 330  Q
    ||||||||||||||||||||||||||||||||    
T  5569866 atgaagcacggacactcctcagattaggcgtg 5569835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 3209518 - 3209460
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||  ||||||||| ||||||||||| || ||||||||||  |||||||||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgt 3209460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 8714110 - 8714052
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||  |||||||||| |||| |||||| |||| ||||||| |||||||||||    
T  8714110 ctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgt 8714052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 3398729 - 3398684
Alignment:
Q  310 acactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||| |||||| ||||  |||||||||||||||||||||||    
T  3398729 acactcctctgattagacgtgttccggtgtcggacatgtgtcgtgt 3398684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 7723199 - 7723232
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||| |||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtg 7723232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 13360313 - 13360362
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacat 346  Q
    ||||||||||||||||||| || ||||||||||| | | |||||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat 13360362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 340
Target Start/End: Original strand, 26178620 - 26178661
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    ||||||||| |||||||||| ||||||||||| |||||||||    
T  26178620 atgaagcacagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 326
Target Start/End: Original strand, 28919488 - 28919517
Alignment:
Q  297 ctatgaagcacggacactcctcagattagg 326  Q
    ||||||||||||||||||||||||||||||    
T  28919488 ctatgaagcacggacactcctcagattagg 28919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 5000557 - 5000613
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| |||||| || |||||| |||| || ||||||||| |||||||||||    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgt 5000613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 10649410 - 10649374
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtg 330  Q
    ||||||||||||||||||||||||  |||||||||||    
T  10649410 gacctatgaagcacggacactccttggattaggcgtg 10649374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 25207859 - 25207811
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||| ||||| | |||||||||| |||||||||| ||||||||||||||    
T  25207859 ctataaagcatgaacactcctcatattaggcgtgtcccggtgtcggaca 25207811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 40993273 - 40993333
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  40993273 acctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgt 40993333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 20503584 - 20503526
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgt 20503526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 27505370 - 27505312
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgt 27505312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 55401194 - 55401136
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgt 55401136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 49651713 - 49651774
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||| ||| ||||||| ||| |||||||||||| |||||||||||    
T  49651713 gacctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgt 49651774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 4987222 - 4987278
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 4987278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 11610628 - 11610580
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 34185052 - 34185100
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 34185100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 41961577 - 41961637
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||| ||| ||||||||||| ||| |||||||||| |||||||||    
T  41961577 acctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgt 41961637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 40052433 - 40052383
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  40052433 acctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggaca 40052383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 15999951 - 16000008
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||| ||||||||||||||  ||||||||||| |||||||||||||| |||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 8789489 - 8789541
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgt 350  Q
    ||||||||||||||||||||| ||||||||||| | ||||||| |||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgt 8789541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 18427068 - 18427012
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgt 353  Q
    ||||||| |||||||||||||||||||||| ||| ||||||| |||||| |||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgt 18427012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 355
Target Start/End: Complemental strand, 3631796 - 3631745
Alignment:
Q  304 gcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||| || |||||||| || |||||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgt 3631745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 14979270 - 14979225
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||    
T  14979270 acctatgaagcacggacactcctcgggttaggcgtgtcccggtgtc 14979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 32804485 - 32804542
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||||||||||||    | ||| ||||||||||||||||    
T  32804485 tatgaagcacggacactcctcagattaggcgtttttcagtggcggacatgtgtcgtgt 32804542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 2408590 - 2408634
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcg 341  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||    
T  2408590 ctatgaagcacggagactccttagattaggcgtgtcccggtgtcg 2408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 14829816 - 14829776
Alignment:
Q  301 gaagcacggacactcctcagattaggcgtgacccggtgtcg 341  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcg 14829776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 28812647 - 28812587
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||| |||| |||||||||| ||||||||||| || | |||||||||||| ||||||    
T  28812647 acctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgt 28812587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 28918120 - 28918064
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||| ||||||||||  ||||||||||| ||| |||||||||| |||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgt 28918064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 29508567 - 29508511
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||| ||  |||||| |||| ||||||||||||| ||||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgt 29508511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 1509681 - 1509638
Alignment:
Q  302 aagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||| |||||||||||  |||||||||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggaca 1509638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 5440967 - 5441026
Alignment:
Q  297 ctatgaagcacggacactcctcagattagg-cgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||  |||||| |||| | |||||| |||||||||||||||    
T  5440967 ctatgaagcacggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgt 5441026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 10955074 - 10955013
Alignment:
Q  297 ctatgaagcacggacact---cctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||   |||| ||||||||||| ||| |||||||||| |||||||||    
T  10955074 ctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgt 10955013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 16789141 - 16789088
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    ||||||||||||||||||||||| |||||| ||| ||| |||| |||||||||||    
T  16789141 ctatgaagcacggacactcctcaaattaggtgtgtccc-gtgttggacatgtgtc 16789088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 24204983 - 24205029
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||  |||||||||| || |||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggaca 24205029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 25775624 - 25775578
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||| ||||||||| ||||||||||| || |||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggaca 25775578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 34910435 - 34910393
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    ||||||||||||||||||||| |||||| |||| |||||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 52369908 - 52369858
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||||| || |||| ||| |||||||| |||||    
T  52369908 acctatgaagcacggacactcctcggaataggtgtgtcccggtgttggaca 52369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 4990912 - 4990945
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||| |||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtg 4990945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 8842448 - 8842415
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||| |||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtg 8842415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 14217021 - 14216964
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||| ||| ||||||| ||| ||| |||||| ||| |||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgt 14216964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 14223150 - 14223093
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||| ||| ||||||| ||| ||| |||||| ||| |||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgt 14223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 3163971 - 3164019
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||| |||||||||||  |||||||||| | ||||||||||||    
T  3163971 ctatgaagcatggacactcctcgaattaggcgtgtctcggtgtcggaca 3164019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 13806363 - 13806308
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||| || ||||||||||| ||||| ||||| ||||||| ||||    
T  13806363 atgaagcacggacactc-tcggattaggcgtgtcccggggtcggtcatgtgttgtgt 13806308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 25074914 - 25074866
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||| ||||||||| ||||||| ||| ||| ||||||||||    
T  25074914 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggaca 25074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 26492143 - 26492203
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||| |||||| ||||| |||||| |||| |  |||||| ||||||||||||||    
T  26492143 acctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgt 26492203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 2438661 - 2438717
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgt 2438717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 18840953 - 18841011
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgt 18841011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 11223793 - 11223850
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgt 11223850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 15907851 - 15907909
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||||    
T  15907851 ctatgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgt 15907909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 26769641 - 26769583
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||| |||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgt 26769583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 37419875 - 37419825
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  37419875 acctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 37419825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 35056998 - 35056940
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||||||||||||||   | |||||||||| |||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgt 35056940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 38117099 - 38117157
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||||| |||| ||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgt 38117157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 21782744 - 21782801
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtg 354  Q
    |||||||||||||||||||| |||||||| |||| |||||||| ||||| ||||||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtg 21782801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 44635612 - 44635568
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcg 341  Q
    |||||||||||||||||||||||||||||||||| | ||||||||    
T  44635612 ctatgaagcacggacactcctcagattaggcgtgtctcggtgtcg 44635568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 37559096 - 37559042
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    |||||||||||||||||||||| ||||| |||||  ||||||||||||| |||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtc 37559042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 42511322 - 42511380
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| |||||| |||| ||| |||||||||| |||| ||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgt 42511380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 28596587 - 28596530
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||| ||||||| ||| ||  |||||||||| |||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgt 28596530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 15972993 - 15972934
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||| || || ||||||| ||| ||||| |||||||| |||||||||    
T  15972993 cctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgt 15972934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 23058389 - 23058432
Alignment:
Q  302 aagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggaca 23058432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 346
Target Start/End: Complemental strand, 18622722 - 18622672
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacat 346  Q
    ||||||||||||||||||||||| ||||| | ||| |||||||| ||||||    
T  18622722 cctatgaagcacggacactcctcggattaagtgtgtcccggtgtaggacat 18622672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 19942382 - 19942336
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||| ||||||||||| ||||||||||| ||||||||| ||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagaca 19942336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 24009414 - 24009356
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||  ||| ||||||| ||| ||||| |||| |||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 24009356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 27084388 - 27084330
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||  |||||||||| ||||||||||| | |||||| ||||| |||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgt 27084330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 30404790 - 30404848
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||  || || |||||||||||| || || |||||||||||||||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgt 30404848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 30717459 - 30717517
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||  ||||||||||  ||| |||||| ||| |||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgt 30717517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 327
Target Start/End: Complemental strand, 39323357 - 39323327
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggc 327  Q
    |||||||||||||||||||||||||||||||    
T  39323357 ctatgaagcacggacactcctcagattaggc 39323327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 15657992 - 15657939
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcg 352  Q
    |||||||| ||||||||||| || |||||||| ||||| |||||||| ||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcg 15657939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 27286222 - 27286279
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| ||||||| | |||||||   || ||||||||||||||||||||||||    
T  27286222 tatgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgt 27286279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 44860449 - 44860392
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||  |||||| ||| |||| |||||||||  ||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgt 44860392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 6180789 - 6180845
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcg 352  Q
    ||||||||||||||| ||||||||||||||| ||| | | || ||||||||| ||||    
T  6180789 cctatgaagcacggaaactcctcagattaggtgtgtctcagtatcggacatgagtcg 6180845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 10535685 - 10535733
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||| ||||||||| ||||||||||| || |||||| ||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagaca 10535733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 12748786 - 12748738
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||| ||||||||||| ||||||| || ||||||||| ||||    
T  12748786 ctatgaagcacagacactcctcaaattaggcatgtcccggtgtccgaca 12748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 20539629 - 20539665
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtg 330  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  20539629 gacctatgaagcacggacactcctcggatcaggcgtg 20539665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 325
Target Start/End: Original strand, 24975255 - 24975283
Alignment:
Q  297 ctatgaagcacggacactcctcagattag 325  Q
    |||||||||||||||||||||||||||||    
T  24975255 ctatgaagcacggacactcctcagattag 24975283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 32749754 - 32749802
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||| ||||||||||| |||| ||||||| ||| ||||||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggaca 32749802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 36756275 - 36756331
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||| |||||||||  |||||||||||   ||||||||||||||||| ||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgt 36756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 1815377 - 1815318
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  1815377 cctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgt 1815318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 6427595 - 6427536
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  6427595 cctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgt 6427536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 9828177 - 9828116
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||    
T  9828177 gacctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgt 9828116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 40917882 - 40917821
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||    
T  40917882 gacctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 40917821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 22515827 - 22515885
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgt 22515885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 47989627 - 47989569
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| |||| |||| ||||||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgt 47989569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 1486646 - 1486702
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||| |||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 1486702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 31694638 - 31694697
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| | |||||| ||||    
T  31694638 cctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgt 31694697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 37598951 - 37598892
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||| ||||||||||| |||  ||||||||| |||||||||    
T  37598951 cctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgt 37598892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 5944413 - 5944355
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||||||||| ||||||||||  ||||||||||||||||||| ||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgt 5944355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 16812675 - 16812629
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcgga 343  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcccggtttcgga 16812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 42359391 - 42359437
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 42359437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 40258874 - 40258931
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgt 40258931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 2218347 - 2218299
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggaca 2218299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 5898204 - 5898264
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||| ||||||||||||||||| |||||| |||| |||||||| ||||| |||||||||    
T  5898204 acctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgt 5898264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 21365990 - 21366038
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcgga 343  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  21365990 acctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 29144317 - 29144368
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||| || |||||||||||  |||||||||||||    
T  29144317 gacctatgaagcacggacactcttcggattaggcgtgttccggtgtcggaca 29144368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 16297223 - 16297269
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggaca 16297269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 22881565 - 22881611
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcg 341  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||    
T  22881565 acctatgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 30359486 - 30359440
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcg 341  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||    
T  30359486 acctatgaagcacggacactcctcagatttggcgtgtcccgttgtcg 30359440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 46348323 - 46348381
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||| |||| ||| ||||||| | |||||||||||| |||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgt 46348381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 22947851 - 22947806
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||    
T  22947851 acctatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 46940747 - 46940796
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||| ||||||||| |||||||||||  |||||||||||||    
T  46940747 cctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggaca 46940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 17831462 - 17831510
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||| || |||||||||| |||||||||||| ||||||||||||||    
T  17831462 ctatgaaacatggacactcctaagattaggcgtgtcccggtgtcggaca 17831510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 10233374 - 10233327
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||| ||||||| ||| || |||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 10233327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 18556385 - 18556440
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcg 352  Q
    |||||||||||||||||| ||| ||||||||||| ||| |||||||| | ||||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcg 18556440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 340
Target Start/End: Original strand, 27965940 - 27965983
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 15765879 - 15765829
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||| || ||||||||||| ||| ||||| ||||    
T  15765879 acctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagaca 15765829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 330
Target Start/End: Original strand, 17705545 - 17705579
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtg 330  Q
    ||||||||||||||||||||||||||||| |||||    
T  17705545 cctatgaagcacggacactcctcagattaagcgtg 17705579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 18337448 - 18337390
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||| |||| || ||| |||||||||| |||| ||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgt 18337390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 32461393 - 32461451
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||| ||  ||||||||||| ||| ||||| |||| |||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgt 32461451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 38078601 - 38078659
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| | ||||||| ||||||||||| || ||||| | |||||||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgt 38078659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 327
Target Start/End: Original strand, 5927281 - 5927310
Alignment:
Q  298 tatgaagcacggacactcctcagattaggc 327  Q
    ||||||||||||||||||||||||||||||    
T  5927281 tatgaagcacggacactcctcagattaggc 5927310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 17778670 - 17778617
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcg 352  Q
    |||||||||| ||||| ||| |||||||| || |||||||||||||| ||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg 17778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 20157283 - 20157332
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||| |||||||| |||||| ||| | ||||||||||||    
T  20157283 cctatgaagcacggatactcctcaaattaggtgtgtctcggtgtcggaca 20157332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 26830701 - 26830648
Alignment:
Q  302 aagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||| ||||||||||| |||||| ||| ||| |||| ||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgt 26830648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 34741966 - 34741918
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||||||||    
T  34741966 cctatgaagcacggacactcttcggattaggcgtgtccc-gtgtcggaca 34741918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 35702542 - 35702575
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||| |||||||||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtg 35702575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 38075909 - 38075954
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcgg 342  Q
    |||||||||| | |||||||||| |||||||||| |||||||||||    
T  38075909 ctatgaagcatgtacactcctcaaattaggcgtgtcccggtgtcgg 38075954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 113412 - 113364
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||| || |||||||| ||||||||||| |||||||| |||||    
T  113412 ctatgaagcatgggcactcctcggattaggcgtgtcccggtgttggaca 113364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 1704935 - 1704983
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||| ||||||||||  ||||||||||| | ||||||||||||    
T  1704935 ctatgaagcatggacactccttggattaggcgtgtctcggtgtcggaca 1704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 340
Target Start/End: Original strand, 7918153 - 7918197
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    ||||||||||||||||||||||| ||||||| ||| || ||||||    
T  7918153 cctatgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 351
Target Start/End: Original strand, 9690211 - 9690267
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    |||||||||||||  ||||||  | ||||||||||| |||||||||||||| |||||    
T  9690211 acctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtc 9690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 18471416 - 18471356
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| |||||||||||||  |||||| |||   |||||||||||| |||||||||    
T  18471416 acctatgaagtacggacactcctcgaattaggtgtgtttcggtgtcggacacgtgtcgtgt 18471356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 25934748 - 25934688
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||  ||| ||||||  ||| ||||| |||| |||||||||    
T  25934748 acctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgt 25934688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 36878585 - 36878541
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcg 341  Q
    |||||||||||||||||||||  ||||||||||| ||| ||||||    
T  36878585 ctatgaagcacggacactcctgggattaggcgtgtccccgtgtcg 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 48040418 - 48040462
Alignment:
Q  301 gaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||  |||||||||| ||| ||||||||||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggaca 48040462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 51410146 - 51410086
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||| | ||||||  ||||||||||| | |||||||||| | |||||||||    
T  51410146 acctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgt 51410086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 4821 - 4879
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 715545 - 715603
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 752871 - 752929
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 23292926 - 23292984
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 23292984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 11596294 - 11596345
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  11596294 gacctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 18513173 - 18513223
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  18513173 acctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggaca 18513223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 29205587 - 29205529
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgt 29205529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 3064866 - 3064926
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||| ||||||||||| | | | ||||||||||||||||||    
T  3064866 acctatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 24343632 - 24343584
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggaca 24343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 28964188 - 28964246
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgt 28964246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 34306744 - 34306802
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||| ||||||||||||||||| | |||||||||||| |||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgt 34306802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 3947702 - 3947759
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||| ||||||| ||| || ||||||||||| |||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgt 3947759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 14465006 - 14465063
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||||||| |||| ||| |||||| ||| |||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgt 14465063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 30982808 - 30982865
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 30982865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 19482800 - 19482740
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||| ||||||||| ||||||| ||| ||| |||||||||| |||||||||    
T  19482800 acctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgt 19482740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 53381528 - 53381576
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcgga 343  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  53381528 acctatgaagcacggacactcctcggattaggtgtgtcccggtgtcgga 53381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 345
Target Start/End: Original strand, 3712458 - 3712501
Alignment:
Q  302 aagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggaca 3712501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 351
Target Start/End: Complemental strand, 28084640 - 28084589
Alignment:
Q  300 tgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||| |||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 8423658 - 8423716
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||| ||||||||||| ||| ||||||||||| ||||||||||||||  ||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgt 8423716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 18966628 - 18966570
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||| |||||||||||  |||| ||||||||| |||| ||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgt 18966570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 35157925 - 35157983
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||| ||| ||||| |||||  ||||||| |||||||||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgt 35157983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 36635449 - 36635391
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||| || ||||||||||| ||||||||| |||  |||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgt 36635391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 36409441 - 36409502
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||| |||||||||||||||| |  |||| |||| |||||||| |||||||||||||||    
T  36409441 gacctataaagcacggacactccttaccttagacgtgtcccggtgtaggacatgtgtcgtgt 36409502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 36423607 - 36423668
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||| |||||||||||||||| |  |||| |||| |||||||| |||||||||||||||    
T  36423607 gacctataaagcacggacactccttaccttagacgtgtcccggtgtaggacatgtgtcgtgt 36423668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 5775303 - 5775343
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccgg 336  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  5775303 cctatgaagcacggacactcctcggattaggcgtgtcccgg 5775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 16073515 - 16073455
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||||||||||| ||||||||||| |   ||||||||||||| ||||||    
T  16073515 acctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgt 16073455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 24613628 - 24613688
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||  |||||| |||| || |||||| |||| |||||||||    
T  24613628 acctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgt 24613688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 35161157 - 35161097
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||  || ||||||| |||  ||||||||||||| |||||||||    
T  35161157 acctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgt 35161097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 40784073 - 40784029
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||    
T  40784073 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 5922532 - 5922579
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 28000672 - 28000727
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtg 354  Q
    ||||||||||||||||| |||||||||| ||| | ||||||| |||| ||||||||    
T  28000672 atgaagcacggacactcatcagattaggtgtgtctcggtgtcagacacgtgtcgtg 28000727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 37203371 - 37203324
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggac 344  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||||    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 40965389 - 40965342
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||| |||||||||||||||||||||| |  |||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggaca 40965342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 2361915 - 2361973
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||| |||||||||| ||| | ||||||| |||| | |||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgt 2361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 12884347 - 12884401
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    |||||||||||||||||||||| |||||| |||| |||| ||||| ||| |||||    
T  12884347 ctatgaagcacggacactcctcggattagacgtgccccgatgtcgaacacgtgtc 12884401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 12895214 - 12895260
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcgga 343  Q
    |||||||||||| ||||||||| ||||||||||| |||| |||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcgga 12895260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 16184952 - 16184902
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||  ||||||||| ||||||||||| ||| ||||||||||    
T  16184952 acctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggaca 16184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 19312463 - 19312409
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgt 353  Q
    ||||| |||||||||| |||||||||| |||| | |||||||||||| |||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgt 19312409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 22440559 - 22440605
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||| ||||||||||| ||  ||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggaca 22440605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 355
Target Start/End: Original strand, 27706110 - 27706164
Alignment:
Q  301 gaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||| ||| ||||||||||||||||| |||||| ||||| | |||||||||    
T  27706110 gaagcacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgt 27706164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 42015081 - 42015047
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgt 329  Q
    ||||||||||||||| |||||||||||||||||||    
T  42015081 acctatgaagcacggtcactcctcagattaggcgt 42015047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 42640643 - 42640589
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtc 351  Q
    |||||||||||||| ||||||| ||||||||||| || |||| |||||| |||||    
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtc 42640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 49431145 - 49431087
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||| ||||| ||||||||||| ||| ||||||| |||||||| ||||| |||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgt 49431087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 944601 - 944650
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||| | || ||||||||||||||| ||| ||||||||||||||    
T  944601 cctatgaagctcagagactcctcagattaggtgtgtcccggtgtcggaca 944650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 30094133 - 30094084
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||| ||||||||||||| || ||||||||||| ||||||||| ||||    
T  30094133 cctatgtagcacggacactcttcggattaggcgtgtcccggtgtccgaca 30094084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 4157266 - 4157210
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||| ||||||||||  |||||| ||  | ||||||||||||||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgt 4157210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 4157553 - 4157497
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||  ||||||||||  |||||||||  | ||||||||||||||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgt 4157497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 330
Target Start/End: Complemental strand, 4383484 - 4383452
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtg 330  Q
    ||||||||||||||||||||| |||||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtg 4383452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 22234817 - 22234877
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||| ||||| ||| ||||||  ||| || ||||||||||| |||||||||    
T  22234817 acctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgt 22234877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 30299049 - 30299009
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccgg 336  Q
    ||||||||||||||||||||||| |||||| |||| |||||    
T  30299049 cctatgaagcacggacactcctcggattagacgtgtcccgg 30299009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 30327917 - 30327877
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccgg 336  Q
    ||||||||||||||||||||||| |||||| |||| |||||    
T  30327917 cctatgaagcacggacactcctcggattagacgtgtcccgg 30327877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 47264116 - 47264060
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgt 353  Q
    ||||||||||| ||| ||| || ||||||||||| || |||||| ||||||||||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgt 47264060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 8917 - 8859
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgt 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 241724 - 241666
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt 241666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 236912 - 236962
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||| ||||    
T  236912 acctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagaca 236962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 21194063 - 21194121
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgt 21194121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 7677835 - 7677777
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||| ||| |||||| ||||||||||| |||||||||||||||||| |||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgt 7677777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 14873642 - 14873588
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgt 350  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  14873642 cctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgt 14873588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 15382592 - 15382546
Alignment:
Q  309 gacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgt 15382546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 17123166 - 17123109
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgt 17123109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 21576685 - 21576743
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||| |||| |||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgt 21576743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 38464311 - 38464365
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtg 349  Q
    ||||||||||||| |||||||||| ||||||| ||| ||||||||||||||||||    
T  38464311 acctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggacatgtg 38464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 43565003 - 43564942
Alignment:
Q  294 gacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| ||||||||  ||||||||    
T  43565003 gacctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgt 43564942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 21190998 - 21191054
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||| |||| ||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgt 21191054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 32766872 - 32766928
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgt 353  Q
    ||||||||||||||||||||||||||||| |||  || ||||||||||| |||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgt 32766928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 39268541 - 39268596
Alignment:
Q  300 tgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||  ||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgt 39268596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 31084447 - 31084389
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||| |||||||||||||| |||||||| || ||| |||||||||| |||||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgt 31084389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 39698671 - 39698625
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcgga 343  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 39698625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 42893479 - 42893421
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| |||||||||||| |||||||||| || ||||||||||| |||| ||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgt 42893421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 17088402 - 17088362
Alignment:
Q  305 cacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggaca 17088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 35017162 - 35017114
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||||||||||||| ||||||||||| |||| ||| |||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggaca 35017114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 43001922 - 43001866
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||| ||||||||||| || |||||  |||| |||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgt 43001866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 2437036 - 2436982
Alignment:
Q  291 accgacctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||| |||||||||||| ||||||||| ||||||||||| |  |||||||||||    
T  2437036 accgagctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggaca 2436982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 330
Target Start/End: Complemental strand, 10298670 - 10298636
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtg 330  Q
    ||||||||||||||||||||||| |||||||||||    
T  10298670 cctatgaagcacggacactcctcggattaggcgtg 10298636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 16304366 - 16304424
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||| ||||| |||||| |||| | ||||||||| || |||||||||    
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgt 16304424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 21522880 - 21522822
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||| |||||||||||| |  ||||||||||| ||||||| |||||| |||||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgt 21522822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 21533446 - 21533388
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||| |||||||||||| |  ||||||||||| ||||||| |||||| |||||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgt 21533388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 30098456 - 30098398
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||| ||||| ||||||| ||| || |||||| |||| |||||||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgt 30098398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 21542159 - 21542102
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||| ||||||||| ||||  |||| |||||| |||||||||||||| |||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgt 21542102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 22423764 - 22423797
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||| |||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtg 22423797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 40000491 - 40000536
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    |||||||||||||||||||||||||||| || |||| | |||||||    
T  40000491 acctatgaagcacggacactcctcagataagacgtgtctcggtgtc 40000536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 2419986 - 2419938
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||    
T  2419986 ctatgaagcacggacactcatcggattaggtgtgtcccggggtcggaca 2419938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 11686070 - 11686010
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||| |||||| |||| |  ||| | ||||| |||||||||    
T  11686070 acctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgt 11686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 17593663 - 17593711
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||| ||||||||||||| ||||| ||||| |||||||| |||||    
T  17593663 ctatgaagtacggacactcctcggattaagcgtgtcccggtgttggaca 17593711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 19579829 - 19579773
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||| |||| ||||||||| ||||||||||| ||||||||  ||||| ||||||||    
T  19579829 atgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgt 19579773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 23015926 - 23015982
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||| |||||||||||| ||||||||||| |||  |||||||||  ||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgt 23015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 28588612 - 28588672
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| |||||||| || ||||| ||||| || |||||| || |||||||||||    
T  28588612 acctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgt 28588672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 30502330 - 30502386
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| ||| ||||  |||||||| || ||| ||||||||||||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgt 30502386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 30542673 - 30542729
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||| ||| ||||  |||||||| || ||| ||||||||||||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgt 30542729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 37328774 - 37328822
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggac 344  Q
    ||||||||||||||||||||||| ||||| ||||  |||||| ||||||    
T  37328774 cctatgaagcacggacactcctcggattaagcgtatcccggtatcggac 37328822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 92940 - 92883
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgt 92883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 3777 - 3836
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||| ||||||||||| ||||||||||| | || |||||||||||||||||||    
T  3777 cctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgt 3836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 403 - 460
Alignment:
Q  298 tatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| | |||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgt 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 8722 - 8662
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||||  ||||||||||  ||| |||||||||| |||||||||    
T  8722 acctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 2976 - 3036
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||||| || ||||||||||   | ||||||||||||||||||||    
T  2976 acctatgaagcacggacactccccatattaggcgtgtttcagtgtcggacatgtgtcgtgt 3036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 71857 - 71797
Alignment:
Q  295 acctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||| |||||||||| |||||| |||| |||||||||||||| |||| ||||    
T  71857 acctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgt 71797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 14646 - 14588
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||| ||||||||  ||||||||||| | |||||||||||| |||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgt 14588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 3058 - 3000
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||| |||||||||||||||| |||||||||||  ||||||||| ||| |||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgt 3000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 3428 - 3384
Alignment:
Q  296 cctatgaagcacggacactcctcagattaggcgtgacccggtgtc 340  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||    
T  3428 cctatgaagcacggacactcctcggattaggcgtgtcccagtgtc 3384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 135263 - 135311
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggaca 345  Q
    |||||||||||| |||| |||||||||||||||| || |||||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggaca 135311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 8564 - 8622
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    ||||||||||||||||||||||  ||||||||||  || |||||||||| || ||||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgt 8622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 46776 - 46743
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtg 330  Q
    |||||||||||||||||||||| |||||||||||    
T  46776 ctatgaagcacggacactcctcggattaggcgtg 46743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 17542 - 17591
Alignment:
Q  297 ctatgaagcacggacactcctcagattaggcgtgacccggtgtcggacat 346  Q
    |||||||||||||| ||||  | ||||||||||| |||||||||||||||    
T  17542 ctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcggacat 17591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 9678 - 9734
Alignment:
Q  299 atgaagcacggacactcctcagattaggcgtgacccggtgtcggacatgtgtcgtgt 355  Q
    |||||||||||||||||||| |||||  |||| |||| |||| |||| |||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgt 9734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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