View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15667_low_1 (Length: 1042)

Name: NF15667_low_1
Description: NF15667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15667_low_1
NF15667_low_1
[»] chr6 (43 HSPs)
chr6 (16-493)||(3573279-3573742)
chr6 (762-1028)||(3573984-3574247)
chr6 (714-837)||(6943464-6943587)
chr6 (706-837)||(17250059-17250190)
chr6 (706-837)||(27233273-27233404)
chr6 (706-837)||(30912408-30912539)
chr6 (713-837)||(17543743-17543867)
chr6 (706-837)||(15528106-15528237)
chr6 (706-837)||(23897813-23897944)
chr6 (706-837)||(26053292-26053423)
chr6 (706-837)||(26073345-26073476)
chr6 (714-837)||(7918385-7918508)
chr6 (707-836)||(2912245-2912373)
chr6 (706-837)||(7223521-7223645)
chr6 (713-835)||(10509026-10509148)
chr6 (426-491)||(7223804-7223869)
chr6 (706-837)||(17103204-17103328)
chr6 (706-830)||(19748342-19748466)
chr6 (426-493)||(17103482-17103549)
chr6 (426-491)||(7918125-7918190)
chr6 (706-830)||(22498881-22499005)
chr6 (426-493)||(22498215-22498282)
chr6 (713-837)||(11327574-11327698)
chr6 (426-493)||(11327337-11327404)
chr6 (426-493)||(19748620-19748687)
chr6 (706-793)||(21354786-21354873)
chr6 (426-493)||(17543505-17543572)
chr6 (747-830)||(18491074-18491157)
chr6 (426-493)||(21354962-21355029)
chr6 (429-492)||(26053074-26053137)
chr6 (429-492)||(26073127-26073190)
chr6 (429-492)||(27614434-27614497)
chr6 (431-490)||(31108445-31108504)
chr6 (426-493)||(27233074-27233141)
chr6 (760-837)||(5422798-5422875)
chr6 (433-493)||(15527892-15527952)
chr6 (737-800)||(4841946-4842009)
chr6 (426-493)||(17250345-17250411)
chr6 (426-495)||(27890671-27890740)
chr6 (747-811)||(18490998-18491062)
chr6 (762-837)||(10958239-10958314)
chr6 (426-477)||(30912181-30912232)
chr6 (487-532)||(3573748-3573793)
[»] chr8 (40 HSPs)
chr8 (707-835)||(3094250-3094378)
chr8 (713-837)||(15294672-15294796)
chr8 (713-837)||(15475041-15475165)
chr8 (721-837)||(17646995-17647111)
chr8 (706-837)||(11879602-11879733)
chr8 (706-837)||(11897018-11897149)
chr8 (706-837)||(19704451-19704583)
chr8 (714-837)||(5922051-5922174)
chr8 (706-824)||(22910198-22910316)
chr8 (706-835)||(31424167-31424296)
chr8 (708-837)||(45403031-45403160)
chr8 (706-800)||(29384313-29384406)
chr8 (703-800)||(6810861-6810957)
chr8 (706-790)||(23142224-23142308)
chr8 (719-835)||(6292351-6292467)
chr8 (713-837)||(27836467-27836591)
chr8 (428-479)||(5922349-5922400)
chr8 (426-493)||(7489058-7489125)
chr8 (426-493)||(11879887-11879954)
chr8 (426-493)||(11897303-11897370)
chr8 (426-493)||(40541595-40541662)
chr8 (430-493)||(45403316-45403379)
chr8 (426-493)||(24414062-24414129)
chr8 (435-493)||(2040406-2040464)
chr8 (706-750)||(9212251-9212295)
chr8 (433-493)||(16752310-16752370)
chr8 (441-493)||(19704247-19704299)
chr8 (425-493)||(23142461-23142529)
chr8 (706-819)||(7489279-7489393)
chr8 (760-822)||(24056618-24056680)
chr8 (707-777)||(32424394-32424464)
chr8 (764-837)||(477101-477174)
chr8 (713-789)||(15231774-15231850)
chr8 (737-837)||(15761466-15761566)
chr8 (705-741)||(19704349-19704385)
chr8 (706-741)||(29384205-29384240)
chr8 (426-493)||(31424451-31424518)
chr8 (426-476)||(19335279-19335329)
chr8 (486-527)||(15231862-15231903)
chr8 (426-463)||(29384087-29384124)
[»] chr4 (37 HSPs)
chr4 (693-837)||(8011199-8011343)
chr4 (706-837)||(5361959-5362090)
chr4 (706-837)||(17466081-17466212)
chr4 (706-837)||(36120826-36120957)
chr4 (706-830)||(8889237-8889361)
chr4 (706-837)||(9770114-9770245)
chr4 (706-817)||(9911407-9911518)
chr4 (706-837)||(13551618-13551749)
chr4 (707-837)||(13023569-13023702)
chr4 (426-493)||(9770399-9770466)
chr4 (706-837)||(10142901-10143032)
chr4 (735-837)||(7044729-7044831)
chr4 (706-837)||(37240264-37240390)
chr4 (706-837)||(23064959-23065090)
chr4 (736-837)||(4156765-4156866)
chr4 (427-493)||(23064737-23064803)
chr4 (735-835)||(7815561-7815661)
chr4 (706-837)||(5375666-5375797)
chr4 (735-837)||(18459733-18459835)
chr4 (746-837)||(24719519-24719610)
chr4 (426-493)||(36121110-36121177)
chr4 (735-837)||(7452422-7452523)
chr4 (427-493)||(13551448-13551514)
chr4 (426-493)||(5375952-5376019)
chr4 (760-835)||(6347114-6347189)
chr4 (426-493)||(9911186-9911253)
chr4 (426-493)||(55476275-55476342)
chr4 (435-492)||(13023846-13023903)
chr4 (426-478)||(7045246-7045298)
chr4 (774-830)||(46664421-46664477)
chr4 (426-477)||(6346730-6346781)
chr4 (426-477)||(24719871-24719922)
chr4 (706-741)||(4157053-4157088)
chr4 (433-476)||(8409820-8409863)
chr4 (426-477)||(27528138-27528189)
chr4 (703-740)||(5361855-5361892)
chr4 (426-463)||(8889533-8889570)
[»] chr7 (47 HSPs)
chr7 (706-837)||(26281306-26281436)
chr7 (699-837)||(22687653-22687791)
chr7 (706-837)||(5058531-5058662)
chr7 (706-837)||(8346529-8346660)
chr7 (706-837)||(24990067-24990198)
chr7 (706-837)||(27221420-27221551)
chr7 (713-837)||(11326388-11326512)
chr7 (715-830)||(8571252-8571367)
chr7 (713-837)||(44944848-44944976)
chr7 (706-818)||(8343796-8343908)
chr7 (713-837)||(14055253-14055377)
chr7 (713-837)||(14365281-14365405)
chr7 (706-837)||(4247358-4247489)
chr7 (706-837)||(5715292-5715422)
chr7 (713-822)||(39182277-39182385)
chr7 (706-837)||(9685240-9685371)
chr7 (706-837)||(24725473-24725604)
chr7 (707-837)||(8330042-8330172)
chr7 (706-837)||(7730339-7730469)
chr7 (706-784)||(1977707-1977785)
chr7 (706-830)||(11324988-11325111)
chr7 (706-835)||(17811355-17811480)
chr7 (717-837)||(21846433-21846552)
chr7 (426-493)||(17811635-17811702)
chr7 (426-491)||(24989549-24989614)
chr7 (706-834)||(27509939-27510067)
chr7 (426-493)||(25842506-25842573)
chr7 (713-830)||(26617475-26617596)
chr7 (426-493)||(44944620-44944687)
chr7 (426-491)||(5058817-5058882)
chr7 (427-493)||(9685070-9685136)
chr7 (426-495)||(1981100-1981169)
chr7 (736-829)||(21157800-21157893)
chr7 (428-492)||(8304374-8304438)
chr7 (697-769)||(20570872-20570944)
chr7 (426-493)||(10285678-10285745)
chr7 (426-493)||(26281165-26281230)
chr7 (426-493)||(5715572-5715635)
chr7 (428-493)||(20570662-20570727)
chr7 (430-493)||(4247643-4247706)
chr7 (426-492)||(11326571-11326637)
chr7 (735-837)||(26565653-26565755)
chr7 (433-493)||(27221701-27221762)
chr7 (766-822)||(4574488-4574544)
chr7 (706-741)||(4247557-4247592)
chr7 (427-493)||(4575017-4575083)
chr7 (487-532)||(39182392-39182437)
[»] chr5 (31 HSPs)
chr5 (706-837)||(19578944-19579075)
chr5 (706-837)||(18843717-18843848)
chr5 (714-837)||(20923720-20923843)
chr5 (706-837)||(43234870-43235001)
chr5 (706-837)||(18051526-18051657)
chr5 (713-837)||(22645722-22645846)
chr5 (706-830)||(27340182-27340306)
chr5 (706-837)||(21059152-21059282)
chr5 (707-837)||(23172425-23172559)
chr5 (706-837)||(38158250-38158381)
chr5 (427-493)||(18844002-18844068)
chr5 (706-821)||(41688661-41688775)
chr5 (426-491)||(6852341-6852406)
chr5 (424-493)||(41688439-41688508)
chr5 (706-790)||(19979648-19979732)
chr5 (424-493)||(15051870-15051939)
chr5 (426-493)||(41427706-41427773)
chr5 (426-493)||(20321230-20321297)
chr5 (426-493)||(43235155-43235222)
chr5 (426-474)||(23172219-23172267)
chr5 (426-493)||(18051308-18051375)
chr5 (426-477)||(27339962-27340013)
chr5 (426-491)||(22645502-22645567)
chr5 (426-493)||(19579230-19579298)
chr5 (708-790)||(20320992-20321074)
chr5 (765-837)||(19042444-19042516)
chr5 (429-492)||(19042206-19042269)
chr5 (426-477)||(26021614-26021665)
chr5 (426-476)||(13341472-13341522)
chr5 (766-819)||(24106661-24106714)
chr5 (425-466)||(34702982-34703023)
[»] chr3 (50 HSPs)
chr3 (706-837)||(29067286-29067417)
chr3 (706-837)||(20756041-20756172)
chr3 (706-837)||(28745772-28745903)
chr3 (714-832)||(21963436-21963554)
chr3 (714-832)||(21985872-21985990)
chr3 (713-822)||(30727694-30727803)
chr3 (706-837)||(3449288-3449418)
chr3 (706-837)||(8156126-8156258)
chr3 (706-836)||(39427905-39428035)
chr3 (693-837)||(24649671-24649816)
chr3 (706-830)||(17064330-17064454)
chr3 (714-837)||(22137280-22137403)
chr3 (706-837)||(24620196-24620330)
chr3 (713-800)||(22494784-22494871)
chr3 (426-490)||(24649524-24649588)
chr3 (426-493)||(28746063-28746130)
chr3 (735-825)||(15806531-15806621)
chr3 (706-830)||(22356048-22356173)
chr3 (426-493)||(8592174-8592241)
chr3 (426-493)||(22355841-22355908)
chr3 (735-837)||(27676358-27676460)
chr3 (426-492)||(29067564-29067630)
chr3 (429-493)||(39428194-39428258)
chr3 (426-493)||(20766676-20766743)
chr3 (426-493)||(24619972-24620039)
chr3 (760-837)||(28135724-28135801)
chr3 (433-493)||(3041510-3041570)
chr3 (745-837)||(17796379-17796471)
chr3 (745-837)||(19104819-19104911)
chr3 (706-766)||(42696920-42696980)
chr3 (426-493)||(8560232-8560299)
chr3 (425-478)||(6860985-6861038)
chr3 (735-786)||(10872971-10873022)
chr3 (426-493)||(18014278-18014345)
chr3 (706-837)||(25870363-25870503)
chr3 (426-477)||(41671482-41671533)
chr3 (735-837)||(13005929-13006031)
chr3 (745-835)||(17796272-17796362)
chr3 (745-835)||(19104712-19104802)
chr3 (427-493)||(19348840-19348906)
chr3 (425-478)||(10872489-10872542)
chr3 (429-493)||(30727636-30727701)
chr3 (745-837)||(17796488-17796580)
chr3 (745-837)||(19104928-19105020)
chr3 (426-477)||(15806223-15806274)
chr3 (429-488)||(21553671-21553730)
chr3 (426-493)||(22971096-22971162)
chr3 (433-491)||(9169884-9169942)
chr3 (430-476)||(13006129-13006174)
chr3 (426-476)||(27090746-27090796)
[»] chr1 (45 HSPs)
chr1 (706-837)||(23528658-23528789)
chr1 (706-837)||(9955031-9955162)
chr1 (706-837)||(19009942-19010073)
chr1 (713-837)||(41032673-41032797)
chr1 (706-837)||(9327211-9327342)
chr1 (706-837)||(12513283-12513414)
chr1 (693-819)||(17055982-17056108)
chr1 (713-837)||(21846271-21846395)
chr1 (706-837)||(13276262-13276393)
chr1 (715-837)||(25146773-25146895)
chr1 (706-837)||(9352059-9352190)
chr1 (713-835)||(13100195-13100317)
chr1 (715-837)||(18304815-18304938)
chr1 (706-837)||(42180061-42180192)
chr1 (707-822)||(16125452-16125570)
chr1 (706-837)||(9128836-9128967)
chr1 (426-493)||(9351838-9351905)
chr1 (426-493)||(13100477-13100544)
chr1 (706-837)||(17869746-17869872)
chr1 (427-493)||(21846050-21846116)
chr1 (426-477)||(9954771-9954822)
chr1 (434-493)||(9954816-9954875)
chr1 (426-493)||(25146543-25146610)
chr1 (426-476)||(14074258-14074308)
chr1 (430-493)||(13276038-13276098)
chr1 (428-493)||(16125232-16125297)
chr1 (428-493)||(17197306-17197371)
chr1 (764-837)||(30619077-30619150)
chr1 (735-837)||(18337547-18337648)
chr1 (443-493)||(19009740-19009790)
chr1 (752-837)||(12800623-12800708)
chr1 (753-837)||(14074413-14074497)
chr1 (773-837)||(34478833-34478897)
chr1 (426-493)||(17055695-17055761)
chr1 (430-493)||(17869529-17869592)
chr1 (426-477)||(18304593-18304644)
chr1 (706-741)||(13100391-13100426)
chr1 (428-476)||(12002638-12002686)
chr1 (706-762)||(18228278-18228333)
chr1 (706-750)||(32881416-32881460)
chr1 (432-493)||(8773555-8773613)
chr1 (426-493)||(23528943-23529010)
chr1 (426-477)||(30619244-30619294)
chr1 (735-824)||(8772719-8772809)
chr1 (426-476)||(41032548-41032598)
[»] chr2 (34 HSPs)
chr2 (693-837)||(25539209-25539353)
chr2 (706-837)||(31237973-31238104)
chr2 (713-837)||(23863324-23863448)
chr2 (706-837)||(1404785-1404916)
chr2 (706-837)||(35565950-35566081)
chr2 (707-837)||(31578007-31578136)
chr2 (703-830)||(15588843-15588969)
chr2 (706-837)||(36429850-36429981)
chr2 (706-794)||(30432464-30432552)
chr2 (733-837)||(1690785-1690889)
chr2 (713-800)||(19491896-19491982)
chr2 (713-837)||(20063716-20063840)
chr2 (426-493)||(20064010-20064077)
chr2 (740-837)||(16766712-16766809)
chr2 (425-493)||(25538919-25538987)
chr2 (426-493)||(19262091-19262158)
chr2 (426-493)||(21869096-21869163)
chr2 (436-493)||(27523881-27523938)
chr2 (737-837)||(17995057-17995157)
chr2 (433-493)||(20034004-20034064)
chr2 (426-493)||(30433102-30433169)
chr2 (430-493)||(31237755-31237818)
chr2 (425-493)||(1405070-1405138)
chr2 (426-493)||(19245876-19245943)
chr2 (737-800)||(31023262-31023325)
chr2 (426-491)||(7302071-7302136)
chr2 (426-493)||(974625-974693)
chr2 (426-478)||(8428524-8428576)
chr2 (761-837)||(15516610-15516686)
chr2 (736-812)||(34841583-34841659)
chr2 (736-837)||(5395674-5395775)
chr2 (706-741)||(13502566-13502601)
chr2 (736-837)||(8428144-8428245)
chr2 (760-837)||(19245155-19245232)
[»] scaffold0186 (2 HSPs)
scaffold0186 (706-837)||(8445-8576)
scaffold0186 (426-493)||(8728-8795)
[»] scaffold0417 (1 HSPs)
scaffold0417 (706-837)||(7451-7582)
[»] scaffold0510 (1 HSPs)
scaffold0510 (713-837)||(103-228)
[»] scaffold0042 (2 HSPs)
scaffold0042 (706-837)||(93702-93831)
scaffold0042 (707-741)||(93599-93633)
[»] scaffold0017 (2 HSPs)
scaffold0017 (426-491)||(38302-38367)
scaffold0017 (736-781)||(128985-129031)
[»] scaffold0048 (2 HSPs)
scaffold0048 (737-837)||(48816-48915)
scaffold0048 (737-795)||(61410-61468)
[»] scaffold0036 (1 HSPs)
scaffold0036 (735-837)||(37191-37293)
[»] scaffold0016 (1 HSPs)
scaffold0016 (426-477)||(56200-56251)
[»] scaffold2084 (1 HSPs)
scaffold2084 (426-491)||(117-182)
[»] scaffold0079 (1 HSPs)
scaffold0079 (426-493)||(14701-14768)
[»] scaffold0061 (1 HSPs)
scaffold0061 (426-491)||(76084-76149)
[»] scaffold0182 (1 HSPs)
scaffold0182 (444-491)||(24675-24722)
[»] scaffold0115 (1 HSPs)
scaffold0115 (754-837)||(35103-35186)
[»] scaffold0603 (1 HSPs)
scaffold0603 (739-837)||(9049-9147)
[»] scaffold0526 (1 HSPs)
scaffold0526 (426-491)||(8445-8510)


Alignment Details
Target: chr6 (Bit Score: 312; Significance: 1e-175; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 16 - 493
Target Start/End: Original strand, 3573279 - 3573742
Alignment:
Q  16 atgaatgtgattatgtgaatgatgatcatgcatattatcaacagtgtagcagacctaatgaaatgccaaagtattgtgcagttgattcttccaaaattcc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3573279 atgaatgtgattatgtgaatgatgatcatgcatattatcaacactgtagcagacctaatgaaatgccaaagtattgtgcagttgattcttccaaaattct 3573378  T
Q  116 aagttacttgtgattgcatctattattgtctgcattattccttgtctgcattattgataagtataagaaatcaattgtaattttacaatcaaataatagg 215  Q
    |||| |||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||||||| |||||||||||||||    
T  3573379 aagtcacttgtgattgcatctattattgtctgcattat----------------tgataagtataagaaatcaattgtaatttttcaatcaaataatagg 3573462  T
Q  216 tgtatcaatgtaaatataaaatnnnnnnntgtctaatttagttttagtttttgtg--tgtagaatatagagacagtaagtgattttaaaaatgctataaa 313  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||     
T  3573463 tgtatcaatgtaaatataaaataaaaaaatgtctaatttagttttagtttttgtgtgtgtagaatatagagacagtaagtgattttaaaaatgctataac 3573562  T
Q  314 ttctgctaaaaacactgccattgaatataaaatctagatttctttaaaaatgaaacatttcaa-attgannnnnnnnnnaccatgttataagtacgaaag 412  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||            |||||||||||||||||||||    
T  3573563 ttttgctaaaaacactgccattcaatataaaatctagatttctttaaaaatgaaacatttcaatatt--ttttttttttaccatgttataagtacgaaag 3573660  T
Q  413 tgattaatctctaaaggttgtcaaaatcgggactttacttcaggtcg-aaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3573661 tgattaatctctaaaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcg 3573742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 762 - 1028
Target Start/End: Original strand, 3573984 - 3574247
Alignment:
Q  762 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaacaccgaaaatacataagatgtgttct 861  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| | |||||| |||||||||||||| ||||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaacaccaaaaatacataagatatgttct 3574083  T
Q  862 ctcttttcatcc-aattttctctatcgaactcgtgagcacttgtttaaagagttcaaatttcttacaatttgaatcaatccactactagtaattaatatt 960  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    |||||||    
T  3574084 ctcttttcatccgaattttctctatcgaacttgtgagcacttgtttaaagagtccaaaattcttacaatttgaatcaatccactactag----taatatt 3574179  T
Q  961 tgtttcgtatacatatcaaccaattacttcattttaagagaacttggtttacaatgtgggaaggaatt 1028  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3574180 tgtttcttatacatatcaaccaattacttcattttaagagaacttggtttacaatgtgggaaggaatt 3574247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 714 - 837
Target Start/End: Original strand, 6943464 - 6943587
Alignment:
Q  714 aaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 813  Q
    |||||||||||||||||||||| ||||||  ||||||  ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| |    
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  814 atttaagtcggaattttaacaaca 837  Q
    ||||||||||| ||||| ||||||    
T  6943564 atttaagtcgggattttgacaaca 6943587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 17250190 - 17250059
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||| ||| ||||||| |||||| |||||||| ||||||||| |||||||||||||||||||||| || |||| |||     
T  17250190 gaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctgg 17250091  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||||||||||    
T  17250090 attttaggatttaagtcgggattttaacaaca 17250059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 27233273 - 27233404
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||||||||||  |||||| |||||||||||||||||| ||||||||||||||||||||||| | |||| |||     
T  27233273 gaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctgg 27233372  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| | ||| ||||||    
T  27233373 attttaggatttaagtcggtagtttgacaaca 27233404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 30912408 - 30912539
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||| || |    
T  30912408 gaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 30912507  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||||| || ||||| ||||||    
T  30912508 attttaggatttaagttgggattttgacaaca 30912539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 17543743 - 17543867
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    ||||||||||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||     
T  17543743 taaaatcgcaatcaaaatccatagattttgcttattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttag 17543842  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    |||||||||||  ||||| ||||||    
T  17543843 gatttaagtcgagattttgacaaca 17543867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 15528106 - 15528237
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||| ||||||||||||||||  ||||||  |||||||||||| |||| ||||||| ||||||||||||||||| |||| ||||    
T  15528106 gaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctga 15528205  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  15528206 attttaggatttaagtcgggattttgacaaca 15528237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 23897944 - 23897813
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||||||||| || |||||| | ||| ||||||||||||||||||||||| |||||||||||||| |||| |||     
T  23897944 gaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgc 23897845  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| || ||| |||||    
T  23897844 attttaggatttaagtcgggatcttatcaaca 23897813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 26053292 - 26053423
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||  |||||||||| ||||||||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||| |||| ||      
T  26053292 gaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctag 26053391  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||||||||||||| ||||| ||||||    
T  26053392 attttaagatttaagtcgggattttgacaaca 26053423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 26073345 - 26073476
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||  |||||||||| ||||||||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||| |||| ||      
T  26073345 gaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctag 26073444  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||||||||||||| ||||| ||||||    
T  26073445 attttaagatttaagtcgggattttgacaaca 26073476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 714 - 837
Target Start/End: Original strand, 7918385 - 7918508
Alignment:
Q  714 aaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 813  Q
    |||||| |||||||||||||| |||||||||||| || ||||| |||||||||||| |||||||||||||||| |||||||| |||| ||||||||||      
T  7918385 aaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatggatttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaga 7918484  T
Q  814 atttaagtcggaattttaacaaca 837  Q
    ||||||||||| ||||| ||||||    
T  7918485 atttaagtcgggattttgacaaca 7918508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 707 - 836
Target Start/End: Original strand, 2912245 - 2912373
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaa 806  Q
    ||||| |||||| |||||||||||||||| ||||||||||||||  ||||||||||| ||||||| ||||||||| || ||||||| || |||| || ||    
T  2912245 aaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttgaagatggagaaagttgcaaaatcctaaa 2912343  T
Q  807 ttttaagatttaagtcggaattttaacaac 836  Q
    |||||||||||||||||| ||||| |||||    
T  2912344 ttttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 7223645 - 7223521
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||       |||||||||||||||| |||| || |    
T  7223645 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattctactatggatttaag-------aggtgaagaaagtcgcaaaatcctaa 7223553  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  7223552 attttaggatttaagtcgggattttgacaaca 7223521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 713 - 835
Target Start/End: Original strand, 10509026 - 10509148
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||| |||||||||||||| ||||||| |||||| ||||||||||||  ||||||||| ||||| |||||||||||| | || ||||||||||||     
T  10509026 taaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtgaagaaagtcacaaatttctgaattttag 10509125  T
Q  813 gatttaagtcggaattttaacaa 835  Q
    |||||||||| | ||||| ||||    
T  10509126 gatttaagtctggattttgacaa 10509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 426 - 491
Target Start/End: Complemental strand, 7223869 - 7223804
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7223869 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaat 7223804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 17103328 - 17103204
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||| |||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||| ||       ||||| |||| ||||    
T  17103328 gaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagt-------gtcgcaaaatcctga 17103236  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||||||||||||| ||||| ||||||    
T  17103235 attttaagatttaagtcgggattttgacaaca 17103204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 706 - 830
Target Start/End: Complemental strand, 19748466 - 19748342
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||||| || |||||||||||| || | |||| |||     
T  19748466 gaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctgg 19748367  T
Q  806 attttaagatttaagtcggaatttt 830  Q
    ||| ||||||||||||||| |||||    
T  19748366 attgtaagatttaagtcgggatttt 19748342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 17103549 - 17103482
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17103549 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcg 17103482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 426 - 491
Target Start/End: Original strand, 7918125 - 7918190
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  7918125 aaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaat 7918190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 706 - 830
Target Start/End: Original strand, 22498881 - 22499005
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||| ||||| |||||||||||||||||  ||||||  |||| |||||||||||||||||||| ||||||||||||||||| ||||| ||     
T  22498881 gaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgagtcgttcaaggtgaagaaagtcgcaaaattgtgg 22498980  T
Q  806 attttaagatttaagtcggaatttt 830  Q
    | |||| ||||| ||| || |||||    
T  22498981 aatttaggattttagttgggatttt 22499005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 22498215 - 22498282
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  22498215 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcg 22498282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 11327574 - 11327698
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||| |||| |||||| ||||||||  ||| |||   || ||||||     
T  11327574 taaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttag 11327673  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    | |||||||||| ||||| ||||||    
T  11327674 gttttaagtcgggattttgacaaca 11327698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 11327337 - 11327404
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  11327337 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcg 11327404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 19748687 - 19748620
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||    
T  19748687 aaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcg 19748620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 706 - 793
Target Start/End: Complemental strand, 21354873 - 21354786
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtc 793  Q
    |||||| |||||||||||| |||| ||||||||||||  |||||| ||||||||| |||||||| ||||||||||||| |||||||||    
T  21354873 gaaatcgtaaaatcgcaataaaaaacgatggattttgtctattttgggattctaccatggatttaagtcgttgaaggtaaagaaagtc 21354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 17543505 - 17543572
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||||    
T  17543505 aaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcg 17543572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 747 - 830
Target Start/End: Original strand, 18491074 - 18491157
Alignment:
Q  747 tttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaatttt 830  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||  || |||||||| |||||| |||||||||||| |||||    
T  18491074 ttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggatttt 18491157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 21355029 - 21354962
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||| |||| ||||||||| || |||||||||||| ||||||||||||||||||||||    
T  21355029 aaggttgtcaaaattgggattttacttcaagttgaaagggaatagaaaaatcaggactcgtaaaatcg 21354962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 26053074 - 26053137
Alignment:
Q  429 gttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatc 492  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  26053074 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatc 26053137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 26073127 - 26073190
Alignment:
Q  429 gttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatc 492  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  26073127 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatc 26073190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 27614434 - 27614497
Alignment:
Q  429 gttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatc 492  Q
    |||||||||||  ||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  27614434 gttgtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatc 27614497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 431 - 490
Target Start/End: Complemental strand, 31108504 - 31108445
Alignment:
Q  431 tgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaa 490  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaa 31108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 27233074 - 27233141
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||| | |||||||||||||| |||||||||  ||||||| |||||| ||||||||    
T  27233074 aaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcg 27233141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 760 - 837
Target Start/End: Original strand, 5422798 - 5422875
Alignment:
Q  760 ctatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||| |||||||||||||||||||||| ||||| || ||||  |||||||||  ||||||||||| ||||| ||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaaca 5422875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 493
Target Start/End: Original strand, 15527892 - 15527952
Alignment:
Q  433 tcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||  |||||||||||||||||||||| |||||||||||| | ||||| |||||||    
T  15527892 tcaaaatcctgactttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcg 15527952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 737 - 800
Target Start/End: Original strand, 4841946 - 4842009
Alignment:
Q  737 attttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaat 800  Q
    ||||||| |||| | ||||||| ||| ||||||||||||||||||||||| |||||||| ||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaat 4842009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 17250411 - 17250345
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| |||||||||||||||||||||||||||||||| ||| ||  |||  |||||||||||||||    
T  17250411 aaggttatcaaaatcgggactttacttcaggtcgaaaggaaatggc-gaattgggactcgtaaaatcg 17250345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 426 - 495
Target Start/End: Complemental strand, 27890740 - 27890671
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcgta 495  Q
    |||||||||||| ||| |||||||||||| || |||||||| ||| |||||  | |||||||||||||||    
T  27890740 aaggttgtcaaattcgagactttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgta 27890671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 747 - 811
Target Start/End: Original strand, 18490998 - 18491062
Alignment:
Q  747 tttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaatttta 811  Q
    |||| ||||||| ||||||||||||||| ||||||||||| ||||| || |||| ||| ||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggatttta 18491062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 837
Target Start/End: Original strand, 10958239 - 10958314
Alignment:
Q  762 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||||||||| || ||||||||||   ||||||| |||| ||||||||| ||||||||||||  ||||| ||||||    
T  10958239 atggatttgaatccttgaaggtgagtcaagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaaca 10958314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 30912181 - 30912232
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    ||||||||||||||||| | ||| |||||||| ||||| |||||||||||||    
T  30912181 aaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatc 30912232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 487 - 532
Target Start/End: Original strand, 3573748 - 3573793
Alignment:
Q  487 aaaatcgtaggaattcactcaactacttttgtagaatcgatttaag 532  Q
    ||||||||||||||| ||||||||||| ||||||||| ||| ||||    
T  3573748 aaaatcgtaggaatttactcaactactcttgtagaatagatataag 3573793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 4e-47; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 707 - 835
Target Start/End: Original strand, 3094250 - 3094378
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaa 806  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || |||| |||||    
T  3094250 aaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaa 3094349  T
Q  807 ttttaagatttaagtcggaattttaacaa 835  Q
    ||||||||||||||||| |||||| ||||    
T  3094350 ttttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 713 - 837
Target Start/End: Complemental strand, 15294796 - 15294672
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||     
T  15294796 taaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttag 15294697  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    |||||||||||| ||||| ||||||    
T  15294696 gatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 713 - 837
Target Start/End: Complemental strand, 15475165 - 15475041
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||     
T  15475165 taaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttag 15475066  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    |||||||||||| ||||| ||||||    
T  15475065 gatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 721 - 837
Target Start/End: Complemental strand, 17647111 - 17646995
Alignment:
Q  721 caatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaag 820  Q
    ||||||||||||||| ||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  17647111 caatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaag 17647012  T
Q  821 tcggaattttaacaaca 837  Q
    |||||||||| ||||||    
T  17647011 tcggaattttgacaaca 17646995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 11879733 - 11879602
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| ||||| | |||||| |||||||||||| |||||||||||||||| ||||||||||| || |||| ||||    
T  11879733 gaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctga 11879634  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||| ||||||| ||||||    
T  11879633 attttaggatttaagtcagaattttgacaaca 11879602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 11897149 - 11897018
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| ||||| | |||||| |||||||||||| |||||||||||||||| ||||||||||| || |||| ||||    
T  11897149 gaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctga 11897050  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||| ||||||| ||||||    
T  11897049 attttaggatttaagtcagaattttgacaaca 11897018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 19704451 - 19704583
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattc-tg 804  Q
    |||||| |||||| |||||||||||||||||||||||| |||| | | |||||||||||||||||||||||||||||||||||||||||| |||  | ||    
T  19704451 gaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttg 19704550  T
Q  805 aattttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||||||||||| || ||||| ||||||    
T  19704551 aattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 714 - 837
Target Start/End: Complemental strand, 5922174 - 5922051
Alignment:
Q  714 aaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 813  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||||| | ||||||||||||||||||||||| | |||| ||| |||||| |    
T  5922174 aaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttagg 5922075  T
Q  814 atttaagtcggaattttaacaaca 837  Q
    ||||||||||| ||||| ||||||    
T  5922074 atttaagtcgggattttgacaaca 5922051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 706 - 824
Target Start/End: Original strand, 22910198 - 22910316
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||  ||||||||||| |||||||||||||||| |||||||||||||  |||| || |    
T  22910198 gaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaagattctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaa 22910297  T
Q  806 attttaagatttaagtcgg 824  Q
    |||||| ||||||||||||    
T  22910298 attttaggatttaagtcgg 22910316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 706 - 835
Target Start/End: Complemental strand, 31424296 - 31424167
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||||| | |||||||||||  |||| ||||    
T  31424296 gaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctga 31424197  T
Q  806 attttaagatttaagtcggaattttaacaa 835  Q
    ||||||  ||||||||| | ||||| ||||    
T  31424196 attttagaatttaagtcaggattttgacaa 31424167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 708 - 837
Target Start/End: Complemental strand, 45403160 - 45403031
Alignment:
Q  708 aatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaat 807  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||| ||||||||||||| ||||||||||| ||||  || ||    
T  45403160 aatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggat 45403061  T
Q  808 tttaagatttaagtcggaattttaacaaca 837  Q
    ||||  ||||||||||  ||||| ||||||    
T  45403060 tttagaatttaagtcgcgattttgacaaca 45403031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 706 - 800
Target Start/End: Original strand, 29384313 - 29384406
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaat 800  Q
    |||||| |||||||||||||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  29384313 gaaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 29384406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 703 - 800
Target Start/End: Complemental strand, 6810957 - 6810861
Alignment:
Q  703 tatgaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaat 800  Q
    ||||||||| |||||||| |||||||||||||| ||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6810957 tatgaaatcgtaaaatcgtaatcaaaatcgatg-attttgcctattttaaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 706 - 790
Target Start/End: Complemental strand, 23142308 - 23142224
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaa 790  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||    
T  23142308 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggattctactatggatttcagtcgttgaagttgaagaaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 719 - 835
Target Start/End: Original strand, 6292351 - 6292467
Alignment:
Q  719 cgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagattta 818  Q
    |||||||||||||| || ||||| |||||||| | ||| |||||||| ||||||||||| ||| |||| |||||| | ||||  | ||||||||||||||    
T  6292351 cgcaatcaaaatcgttgaatttttcttattttagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagattta 6292450  T
Q  819 agtcggaattttaacaa 835  Q
    |||||| ||||||||||    
T  6292451 agtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 27836467 - 27836591
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||| | ||||||||| |||| |||||||||||||| | |||||||||||||||| ||| |||||||||||| |||  ||| |||| ||||||||||     
T  27836467 taaaattgtaatcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttag 27836566  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    ||| |||||  ||||||| ||||||    
T  27836567 gatctaagtttgaattttgacaaca 27836591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 428 - 479
Target Start/End: Complemental strand, 5922400 - 5922349
Alignment:
Q  428 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcag 479  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5922400 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcag 5922349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 7489058 - 7489125
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  7489058 aaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcg 7489125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 11879954 - 11879887
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | |||||||||||||    
T  11879954 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcg 11879887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 11897370 - 11897303
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | |||||||||||||    
T  11897370 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcg 11897303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 40541595 - 40541662
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| |||||||||||||||||||||| ||||||||| | |||||||||| |||||||||||||||    
T  40541595 aaggttatcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcg 40541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 430 - 493
Target Start/End: Complemental strand, 45403379 - 45403316
Alignment:
Q  430 ttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcg 45403316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 24414062 - 24414129
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||||    
T  24414062 aaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcg 24414129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 435 - 493
Target Start/End: Complemental strand, 2040464 - 2040406
Alignment:
Q  435 aaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||||| |||||||| || |||||||||| | |||||||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcg 2040406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 706 - 750
Target Start/End: Original strand, 9212251 - 9212295
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttt 750  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  9212251 gaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttt 9212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 433 - 493
Target Start/End: Complemental strand, 16752370 - 16752310
Alignment:
Q  433 tcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||| || ||||||||||| ||||||||||| |||||||||  |||||||||||||||    
T  16752370 tcaaaattggaactttacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcg 16752310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 493
Target Start/End: Original strand, 19704247 - 19704299
Alignment:
Q  441 gggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||| ||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  19704247 gggattttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcg 19704299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 493
Target Start/End: Complemental strand, 23142529 - 23142461
Alignment:
Q  425 aaaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||| |||||||| ||||  ||||||||||||||||||| | | | |||||||||||    
T  23142529 aaaggttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcg 23142461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 706 - 819
Target Start/End: Original strand, 7489279 - 7489393
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttattttt----ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaatt 801  Q
    |||||| |||||| |||||||||||||||  ||||||  ||||||     | ||||||||| |||||| ||||||||||||||||||||   || |||||    
T  7489279 gaaatcataaaattgcaatcaaaatcgataaattttgtctattttatttagaattctactacggattttagtcgttgaaggtgaagaaa---gcaaaatt 7489375  T
Q  802 ctgaattttaagatttaa 819  Q
    ||| |||||| |||||||    
T  7489376 ctgtattttacgatttaa 7489393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 760 - 822
Target Start/End: Original strand, 24056618 - 24056680
Alignment:
Q  760 ctatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtc 822  Q
    |||||||||||||||||| || ||||| |||||||| |||| ||| |||||| ||||||||||    
T  24056618 ctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtc 24056680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 707 - 777
Target Start/End: Complemental strand, 32424464 - 32424394
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgtt 777  Q
    ||||| ||||||||||||||||||| ||  ||||||  |||||| ||||||||||||| |||||| |||||    
T  32424464 aaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattctactatgaatttgaatcgtt 32424394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 764 - 837
Target Start/End: Original strand, 477101 - 477174
Alignment:
Q  764 ggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||| |||||||||||||||||| | |||| ||| |||||| |||||||||| | ||||| ||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaaca 477174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 713 - 789
Target Start/End: Complemental strand, 15231850 - 15231774
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaa 789  Q
    ||||||||||||||||   | |||||||||| ||||||  |||| || |||| |||| |||||||||||||||||||    
T  15231850 taaaatcgcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaa 15231774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 737 - 837
Target Start/End: Original strand, 15761466 - 15761566
Alignment:
Q  737 attttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaac 836  Q
    ||||||| |||||| ||||| | ||||| |||||||||||||||||| || ||| || | |||| ||| | |||| |||||||||||  ||||| |||||    
T  15761466 attttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaac 15761565  T
Q  837 a 837  Q
    |    
T  15761566 a 15761566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 705 - 741
Target Start/End: Original strand, 19704349 - 19704385
Alignment:
Q  705 tgaaatcttaaaatcgcaatcaaaatcgatggatttt 741  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19704349 tgaaatcttaaaatcacaatcaaaatcgatggatttt 19704385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 741
Target Start/End: Original strand, 29384205 - 29384240
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggatttt 741  Q
    |||||| |||||||||||||||||||||||||||||    
T  29384205 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 31424518 - 31424451
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||| || |||||||||||||||||| ||  |||||||||   | |||||||||||    
T  31424518 aaggttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatcgacaatcgtaaaatcg 31424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 426 - 476
Target Start/End: Complemental strand, 19335329 - 19335279
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaat 476  Q
    ||||||||||||||||||||||||||| ||||| ||| | ||||| |||||    
T  19335329 aaggttgtcaaaatcgggactttactttaggtcaaaaagaaatagtaaaat 19335279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 486 - 527
Target Start/End: Complemental strand, 15231903 - 15231862
Alignment:
Q  486 taaaatcgtaggaattcactcaactacttttgtagaatcgat 527  Q
    |||||||||| || || |||||||||||||||||||||||||    
T  15231903 taaaatcgtacgattttactcaactacttttgtagaatcgat 15231862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 426 - 463
Target Start/End: Original strand, 29384087 - 29384124
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaag 463  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  29384087 aaggttgtcaaaatcgggattttgcttcaggtcgaaag 29384124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 1e-44; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 693 - 837
Target Start/End: Original strand, 8011199 - 8011343
Alignment:
Q  693 tgcgattttgtatgaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagt 792  Q
    ||||||||||| |||||||  |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  8011199 tgcgattttgtttgaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagt 8011298  T
Q  793 cgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||| |||| |||||||||| ||||| ||| || ||||| ||||||    
T  8011299 cgcaaaatcctgaattttaggatttgagttgggattttgacaaca 8011343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 5361959 - 5362090
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||| |||||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  5361959 gaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 5362058  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  5362059 attttaggatttaagtcgggattttgacaaca 5362090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 17466212 - 17466081
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||| || ||| |||||||| |||| |||| || |    
T  17466212 gaaatcgtaaaatcgcaatctaaatcgatggattttgcttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaa 17466113  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||||||||||||| |||||||| ||||||    
T  17466112 attttaagatttaagttggaattttgacaaca 17466081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 36120957 - 36120826
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | ||| || ||||||||| |||||||||||||||||||| |||| |||| || |    
T  36120957 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaa 36120858  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||| |||||| |||||||||| ||||||    
T  36120857 attttaaaatttaaatcggaattttgacaaca 36120826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 706 - 830
Target Start/End: Complemental strand, 8889361 - 8889237
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||| |||||||| |||| |||||||||||||| |||||||||| || | |||| |||     
T  8889361 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctgg 8889262  T
Q  806 attttaagatttaagtcggaatttt 830  Q
    |||||| |||||||||||| |||||    
T  8889261 attttaggatttaagtcgggatttt 8889237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 9770245 - 9770114
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||| ||| |||||||  |||||| ||||||||||||||||||||||||||||||||||| |||||| | |||| ||      
T  9770245 gaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctag 9770146  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  ||||||||||  ||||||||||||    
T  9770145 attttagaatttaagtcgagattttaacaaca 9770114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 706 - 817
Target Start/End: Original strand, 9911407 - 9911518
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||  | ||||||||||||||||||| || ||||  |||    
T  9911407 gaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttga 9911506  T
Q  806 attttaagattt 817  Q
    |||||| |||||    
T  9911507 attttaggattt 9911518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 13551618 - 13551749
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||   |||||| |||||||||||||||||||||||||| |||||||| |||| || |    
T  13551618 gaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaa 13551717  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||| |||||||  ||||| ||||||    
T  13551718 attttaggatataagtcgagattttgacaaca 13551749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 707 - 837
Target Start/End: Complemental strand, 13023702 - 13023569
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggattttgcttattttt--ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctg 804  Q
    ||||| |||||||||||||||||||||| ||||||   |||||||  ||||||||||||||||||||||| |||||||||||||||||||| |||| ||     
T  13023702 aaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatccta 13023603  T
Q  805 aa-ttttaagatttaagtcggaattttaacaaca 837  Q
    || ||||| ||||||||| || ||||| ||||||    
T  13023602 aatttttaggatttaagttgggattttgacaaca 13023569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 9770466 - 9770399
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  9770466 aaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcg 9770399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 10143032 - 10142901
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||| ||||||||||||||||||||||  |||||| | ||| ||||||||| ||||||| ||||||||| |||||||||| ||||  | |    
T  10143032 gaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaa 10142933  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  ||||||||||| ||||| ||||||    
T  10142932 attttagaatttaagtcgggattttcacaaca 10142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 735 - 837
Target Start/End: Complemental strand, 7044831 - 7044729
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| || ||||  || |||||| |||||||||||| ||||| |||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  835 aca 837  Q
    |||    
T  7044731 aca 7044729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 37240390 - 37240264
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| ||| ||| |||||| || |||||||||||||||||||||||||||||||| |||||||  |    || |    
T  37240390 gaaatcgtaaaatcgcaatcaaaatcgatgaattatgcctattttggg-ttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaa 37240296  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||||| || ||||||||||||    
T  37240295 attttaggatttaagtagggattttaacaaca 37240264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 23064959 - 23065090
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||| ||||| |||||||||||||||  | |||||| | ||||||| ||||||||||||||||||| |||||||||||  | |||| |||     
T  23064959 gaaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactgg 23065058  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  |||||||||||  |||||||||||    
T  23065059 attttagaatttaagtcggggttttaacaaca 23065090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 736 - 837
Target Start/End: Complemental strand, 4156866 - 4156765
Alignment:
Q  736 gattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 835  Q
    ||||||||||||||| |||||||||||  ||||||||||||| |||||||| ||||||   |||| || |||||||||||||||||||| ||||| ||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  836 ca 837  Q
    ||    
T  4156766 ca 4156765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 427 - 493
Target Start/End: Original strand, 23064737 - 23064803
Alignment:
Q  427 aggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| | |||||||||||||    
T  23064737 aggttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcg 23064803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 735 - 835
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    ||||||||| |||||| |||||||||||||| ||||||||| | ||| |||| |||||| | |||| ||| |||||| |||||||||||| |||||||||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  835 a 835  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 5375797 - 5375666
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||| |||||| ||||||  ||||||   |||||| |||| |||| ||||||||||||||||||||||||| ||||  | |    
T  5375797 gaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaa 5375698  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  ||||| || || ||||| ||||||    
T  5375697 attttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 735 - 837
Target Start/End: Original strand, 18459733 - 18459835
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||| ||||| | |||||| ||||  || |||||| ||||| |||||| ||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  835 aca 837  Q
    |||    
T  18459833 aca 18459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 746 - 837
Target Start/End: Complemental strand, 24719610 - 24719519
Alignment:
Q  746 atttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||  |||||||||  | ||||||||  ||||| ||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaaca 24719519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 36121177 - 36121110
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||| |||||||||| || |||||||||||||  |||| |||||||||||||||    
T  36121177 aaggttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcg 36121110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 735 - 837
Target Start/End: Complemental strand, 7452523 - 7452422
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    ||||||||| ||| || ||| || |||||||||| ||||||||||||||||| ||||| || |||||||| ||||||  ||||||||||| ||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggatt-gagtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  835 aca 837  Q
    |||    
T  7452424 aca 7452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 427 - 493
Target Start/End: Original strand, 13551448 - 13551514
Alignment:
Q  427 aggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||| || ||| |||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  13551448 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcg 13551514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 5376019 - 5375952
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||| |||||||||||||||||| |||   ||||| |||||| |||||||||||||||    
T  5376019 aaggttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcg 5375952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 760 - 835
Target Start/End: Original strand, 6347114 - 6347189
Alignment:
Q  760 ctatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 835  Q
    |||||||||||||||||||||||| || ||||| || |||| ||| |||||| ||||||||| |||||||| ||||    
T  6347114 ctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaa 6347189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 9911186 - 9911253
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||| |||||||||  |||||||||||||  |||||||||||||| |||||| |||||||||||||||    
T  9911186 aagggtgtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcg 9911253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 55476342 - 55476275
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||  |||||| | |||||||||||||    
T  55476342 aaggttatcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcg 55476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 435 - 492
Target Start/End: Complemental strand, 13023903 - 13023846
Alignment:
Q  435 aaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatc 492  Q
    ||||| |||||||||||||| |||||||| ||||||||||||| | ||||||||||||    
T  13023903 aaaattgggactttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatc 13023846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 478
Target Start/End: Complemental strand, 7045298 - 7045246
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatca 478  Q
    |||||||||||||| || | |||||||||||||||||||||| ||||||||||    
T  7045298 aaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatca 7045246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 774 - 830
Target Start/End: Original strand, 46664421 - 46664477
Alignment:
Q  774 cgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaatttt 830  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||| | ||||||    
T  46664421 cgttgaagatgaacaaagtcgcaaaattctgaattttaagatttaagttgaaatttt 46664477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 6346730 - 6346781
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    ||||||||||||||||| | ||| |||||||||||||||||| |||||||||    
T  6346730 aaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatc 6346781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 24719922 - 24719871
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    |||||||||||||||| || ||| |||||||||||||||||| |||||||||    
T  24719922 aaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatc 24719871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 741
Target Start/End: Complemental strand, 4157088 - 4157053
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggatttt 741  Q
    |||||| |||||||||||||||||||||||||||||    
T  4157088 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 476
Target Start/End: Complemental strand, 8409863 - 8409820
Alignment:
Q  433 tcaaaatcgggactttacttcaggtcgaaagggaatagcaaaat 476  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  8409863 tcaaaatcgggactttacttcaagttgaaagggagtagcaaaat 8409820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 27528189 - 27528138
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    |||||||||||||||| || |||||||||  ||||||||||||| |||||||    
T  27528189 aaggttgtcaaaatcgagattttacttcatatcgaaagggaataacaaaatc 27528138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 703 - 740
Target Start/End: Original strand, 5361855 - 5361892
Alignment:
Q  703 tatgaaatcttaaaatcgcaatcaaaatcgatggattt 740  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  5361855 tatgaaatcgtaaaatcgcaatcaaagtcgatggattt 5361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 426 - 463
Target Start/End: Complemental strand, 8889570 - 8889533
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaag 463  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  8889570 aaggttgtcaaaatcgggattttgcttcaggtcgaaag 8889533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 9e-42; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 26281306 - 26281436
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  26281306 gaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 26281404  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||||||||| ||||||    
T  26281405 attttatgatttaagtcggaattttgacaaca 26281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 699 - 837
Target Start/End: Original strand, 22687653 - 22687791
Alignment:
Q  699 tttgtatgaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaa 798  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||| ||||||| ||||||||||||| ||    
T  22687653 tttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcgcaaa 22687752  T
Q  799 attctgaattttaagatttaagtcggaattttaacaaca 837  Q
     | |||||||||| |||||||||||| ||||| ||||||    
T  22687753 ttcctgaattttaggatttaagtcgggattttgacaaca 22687791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 5058662 - 5058531
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||  ||||||||| ||||||  |||||||||||||||||  ||||||||||||||||||| |||| |||||||||    
T  5058662 gaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctga 5058563  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  5058562 attttaggatttaagtcgggattttgacaaca 5058531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 8346529 - 8346660
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| || |    
T  8346529 gaaatcgtaaaatcgcaattaaaatcgatggatttttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 8346628  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||| ||||| ||| | ||||| ||||||    
T  8346629 attttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 24990067 - 24990198
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||| ||||||||| | |||| || |    
T  24990067 gaaatcgtaaaattgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaa 24990166  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||  |||||||||||||||||| ||||||    
T  24990167 atttttggatttaagtcggaattttgacaaca 24990198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 27221551 - 27221420
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||||||||||||  |||||  |||||||||||| |||||||||||||||| ||||||||||||| |||| ||||    
T  27221551 gaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 27221452  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  |||||||| || ||||||||||||    
T  27221451 attttagaatttaagttgggattttaacaaca 27221420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 713 - 837
Target Start/End: Complemental strand, 11326512 - 11326388
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||| ||||| ||||||||||||||||||| |||| || |||||||     
T  11326512 taaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaaattttag 11326413  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    ||||||||| || ||||| ||||||    
T  11326412 gatttaagttgggattttgacaaca 11326388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 715 - 830
Target Start/End: Complemental strand, 8571367 - 8571252
Alignment:
Q  715 aaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaaga 814  Q
    |||||||||||||||||||||| ||||   |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||| ||    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  815 tttaagtcggaatttt 830  Q
    |||||||||| |||||    
T  8571267 tttaagtcgggatttt 8571252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 44944848 - 44944976
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaag----gtgaagaaagtcgcgaaattctgaatt 808  Q
    ||||||| ||||||||||||||||||||||  |||||| |||||||||||||||||||| |||||||||    |||||||||||||| |||| |||||||    
T  44944848 taaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcctgaatt 44944947  T
Q  809 ttaagatttaagtcggaattttaacaaca 837  Q
    ||| |||||||||||| ||||| ||||||    
T  44944948 ttaggatttaagtcgggattttgacaaca 44944976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 706 - 818
Target Start/End: Original strand, 8343796 - 8343908
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||| ||||| |||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| | |     
T  8343796 gaaatcgtaaaatcgcaattaaaattgatggatttttcatattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccagg 8343895  T
Q  806 attttaagattta 818  Q
    |||||| ||||||    
T  8343896 attttaggattta 8343908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 713 - 837
Target Start/End: Complemental strand, 14055377 - 14055253
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    ||||||||||||||||||| ||||||||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||| ||||  || ||||||     
T  14055377 taaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttag 14055278  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    ||| ||||| || ||||| ||||||    
T  14055277 gatataagtggggattttcacaaca 14055253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 713 - 837
Target Start/End: Complemental strand, 14365405 - 14365281
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    ||||||||||||||||||| ||||||||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||| ||||  || ||||||     
T  14365405 taaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttag 14365306  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    ||| ||||| || ||||| ||||||    
T  14365305 gatataagtggggattttcacaaca 14365281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 4247489 - 4247358
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||| |||||| |||||||||||  | |||| ||||    
T  4247489 gaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctga 4247390  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||| | || ||||| ||||||    
T  4247389 attttaggatttaaattgggattttgacaaca 4247358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 5715422 - 5715292
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||| | ||||||||||| |||| ||| |||||||||| | |||||||| |||| ||||    
T  5715422 gaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctga 5715324  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  5715323 attttaggatttaagtcgggattttgacaaca 5715292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 713 - 822
Target Start/End: Complemental strand, 39182385 - 39182277
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||| ||  ||||||     
T  39182385 taaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaatcctagattttag 39182287  T
Q  813 gatttaagtc 822  Q
    ||||||||||    
T  39182286 gatttaagtc 39182277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 9685240 - 9685371
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||   |||||| |||||||||||||||||||||||||| |||||||| |||| || |    
T  9685240 gaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaa 9685339  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||| |||||||  ||||| ||||||    
T  9685340 attttaggatataagtcgagattttgacaaca 9685371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 24725473 - 24725604
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| | |||||| ||||||||| |||||||||||| ||||||  ||||||||||||||||||||| ||||||||||||||||||||  ||||  ||     
T  24725473 gaaatcgtcaaatcgtaatcaaaattgatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttgg 24725572  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||| | ||||| ||||||    
T  24725573 attttaggatttaagtctggattttgacaaca 24725604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 707 - 837
Target Start/End: Original strand, 8330042 - 8330172
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaa 806  Q
    ||||| |||||||||||| |||||| ||| ||||| | |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||    
T  8330042 aaatcgtaaaatcgcaattaaaatcaatgaatttttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaa 8330141  T
Q  807 ttttaagatttaagtcggaattttaacaaca 837  Q
    |||||  ||||| ||| | ||||| ||||||    
T  8330142 ttttagaatttaggtcaggattttgacaaca 8330172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 7730339 - 7730469
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||| ||||||||||||||||||||| | |||||| | |||||||| ||||||||||| ||| ||||||||||||||||| |||  |||     
T  7730339 gaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtgaagaaagtcgc-aaaacctgg 7730437  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||| | ||||| ||||||    
T  7730438 attttaggatttaagtcaggattttgacaaca 7730469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 706 - 784
Target Start/End: Complemental strand, 1977785 - 1977707
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtg 784  Q
    |||||| ||||||||||||||||||||| | ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  1977785 gaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtg 1977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 706 - 830
Target Start/End: Complemental strand, 11325111 - 11324988
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||| |||||||||||||  ||| ||||||| |||||| | |||||| |||||||||||||||||||||||||||||| || | ||||  |||    
T  11325111 gaaatcgtaaattcgcaatcaaaatt-atgaattttgcctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatga 11325013  T
Q  806 attttaagatttaagtcggaatttt 830  Q
    |||||| |||||||||||| |||||    
T  11325012 attttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 706 - 835
Target Start/End: Complemental strand, 17811480 - 17811355
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||| |||||||  ||||||   ||||||||||||||||||||||||||||||||| |||||| | ||||   ||    
T  17811480 gaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcaaga 17811381  T
Q  806 attttaagatttaagtcggaattttaacaa 835  Q
    |||||||    |||||||||||||| ||||    
T  17811380 attttaa----taagtcggaattttgacaa 17811355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 717 - 837
Target Start/End: Original strand, 21846433 - 21846552
Alignment:
Q  717 atcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatt 816  Q
    |||||||||||||||||| |||||| | | |||| | |||||||||||||| |||||||||||| ||||| |||||||| |||| ||||||||||  |||    
T  21846433 atcgcaatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatt 21846531  T
Q  817 taagtcggaattttaacaaca 837  Q
    |||||||| ||||| ||||||    
T  21846532 taagtcgggattttgacaaca 21846552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 17811702 - 17811635
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  17811702 aaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcg 17811635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 426 - 491
Target Start/End: Original strand, 24989549 - 24989614
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  24989549 aaggttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaat 24989614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 706 - 834
Target Start/End: Original strand, 27509939 - 27510067
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||| |||| ||||||| |||||||  |||||||||| ||||||| |||||| | ||||||||| |||| |||| ||      
T  27509939 gaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttggatgtgaagaaaatcgcaaaatccttt 27510038  T
Q  806 attttaagatttaagtcggaattttaaca 834  Q
    ||||||  |||||| |||  |||||||||    
T  27510039 attttagaatttaattcgatattttaaca 27510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 25842506 - 25842573
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| ||||||| |||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  25842506 aaggttatcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcg 25842573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 713 - 830
Target Start/End: Original strand, 26617475 - 26617596
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttattttt--ggattctactat--ggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaatt 808  Q
    |||||||||||||||||||||| |||||||| ||| |||  | ||||||||||  | ||||  ||||||||||||||| |||||||| |||| |||||||    
T  26617475 taaaatcgcaatcaaaatcgatagattttgcctatattttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaatt 26617574  T
Q  809 ttaagatttaagtcggaatttt 830  Q
    ||| |||| ||||| |||||||    
T  26617575 ttaggattaaagtcagaatttt 26617596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 44944620 - 44944687
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||  | |||||||||||||||    
T  44944620 aaggttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcg 44944687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 426 - 491
Target Start/End: Complemental strand, 5058882 - 5058817
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||| | | |||||||||    
T  5058882 aaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaat 5058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 427 - 493
Target Start/End: Original strand, 9685070 - 9685136
Alignment:
Q  427 aggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||| || ||| |||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  9685070 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcg 9685136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 426 - 495
Target Start/End: Original strand, 1981100 - 1981169
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcgta 495  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||| |||||  | |||||||||||||||    
T  1981100 aaggttatcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgta 1981169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 736 - 829
Target Start/End: Original strand, 21157800 - 21157893
Alignment:
Q  736 gattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattt 829  Q
    |||||| ||| |||| ||||| | ||||||||||||||||||| | ||||  |||||||| |||  ||||||||||||||||||||| ||||||    
T  21157800 gatttttcttgttttaggattttgctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaattt 21157893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 428 - 492
Target Start/End: Complemental strand, 8304438 - 8304374
Alignment:
Q  428 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatc 492  Q
    |||||||||||||| |||||||||||| |||||||| || ||||||||||  |||||||||||||    
T  8304438 ggttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatc 8304374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 697 - 769
Target Start/End: Original strand, 20570872 - 20570944
Alignment:
Q  697 attttgtatgaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggattt 769  Q
    ||||| || |||||| |||||| |||||||||||||||||||||||  ||||||| ||||||||||| |||||    
T  20570872 attttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttagattctactatagattt 20570944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 10285678 - 10285745
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||| |||||||||||||||||| ||| || |||||||  | |||||||||||    
T  10285678 aaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcg 10285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 26281165 - 26281230
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||| |||||||||||    
T  26281165 aaggttgtcaaaatcaggactttactttaggtcgaaaaggaatagc-aaatcagga-tcgtaaaatcg 26281230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 5715635 - 5715572
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||||    ||||||||| ||||| |||||| |||||||||||||||    
T  5715635 aaggttgtcaaaatcgggactttact----gtcgaaaggaaatagaaaaatcgggactcgtaaaatcg 5715572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 428 - 493
Target Start/End: Original strand, 20570662 - 20570727
Alignment:
Q  428 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||||   ||||| ||||||||    
T  20570662 ggttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcg 20570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 430 - 493
Target Start/End: Complemental strand, 4247706 - 4247643
Alignment:
Q  430 ttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||| |||||||||||||| ||||||||||||||  |||||  ||| |||||||||||    
T  4247706 ttgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcg 4247643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 426 - 492
Target Start/End: Complemental strand, 11326637 - 11326571
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatc 492  Q
    ||||||||||||||| | |||||| ||||||| ||||| ||||||||||||  |||||| |||||||    
T  11326637 aaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatc 11326571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 735 - 837
Target Start/End: Original strand, 26565653 - 26565755
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    |||| |||| ||||||  |||||| ||||| |||||| ||||| || ||||| |||||  | ||||||||||||||| |||||||| | ||||||| |||    
T  26565653 ggatcttgcatattttgagattctgctatgaatttgaatcgttaaaagtgaataaagttacaaaattctgaattttatgatttaaggcagaattttgaca 26565752  T
Q  835 aca 837  Q
    |||    
T  26565753 aca 26565755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 433 - 493
Target Start/End: Complemental strand, 27221762 - 27221701
Alignment:
Q  433 tcaaaatcgggactttacttc-aggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||  |||||||||| | ||||||||||| ||| |||||||||||    
T  27221762 tcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcg 27221701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 822
Target Start/End: Complemental strand, 4574544 - 4574488
Alignment:
Q  766 atttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtc 822  Q
    |||||| |||||||||||||  |||||||| |||||||| |||||| ||||||||||    
T  4574544 atttgaatcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtc 4574488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 741
Target Start/End: Complemental strand, 4247592 - 4247557
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggatttt 741  Q
    |||||| |||||||||||||||||||||||||||||    
T  4247592 gaaatcataaaatcgcaatcaaaatcgatggatttt 4247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 427 - 493
Target Start/End: Complemental strand, 4575083 - 4575017
Alignment:
Q  427 aggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||| | || ||| |||||||| |||||||||||| |||||||  | |||||||||||    
T  4575083 aggttgtcaaaattgagatttttcttcaggttgaaagggaatagtaaaatcaaaaatcgtaaaatcg 4575017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 487 - 532
Target Start/End: Complemental strand, 39182437 - 39182392
Alignment:
Q  487 aaaatcgtaggaattcactcaactacttttgtagaatcgatttaag 532  Q
    ||||||| |||| || ||||||||||||||||||||||||| ||||    
T  39182437 aaaatcgaaggattttactcaactacttttgtagaatcgatataag 39182392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 9e-42; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 19579075 - 19578944
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||| |||| |||     
T  19579075 gaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctgg 19578976  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||||| |||||||| ||||||    
T  19578975 attttatgatttaagttggaattttgacaaca 19578944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 18843848 - 18843717
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| || ||| |||||||||||||||| ||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  18843848 gaaatcgtataattgcaatcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 18843749  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||| || |||||||||||||||||||||||||    
T  18843748 attataggatttaagtcggaattttaacaaca 18843717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 714 - 837
Target Start/End: Complemental strand, 20923843 - 20923720
Alignment:
Q  714 aaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 813  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||| |    
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  814 atttaagtcggaattttaacaaca 837  Q
    ||||||||||| ||||| ||||||    
T  20923743 atttaagtcgggattttgacaaca 20923720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 43235001 - 43234870
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  43235001 gaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctga 43234902  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||||| || ||||| ||||||    
T  43234901 attttaggatttaagttgggattttgacaaca 43234870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 18051526 - 18051657
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| || |||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||||||||| ||||||||||||| |||| ||      
T  18051526 gaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctat 18051625  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  18051626 attttaggatttaagtcgggattttgacaaca 18051657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 22645722 - 22645846
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||||||||||||| |||||| ||| |||||||| ||||| |||||||||||| | ||||||||||||||||||||||| |||| ||| ||||||     
T  22645722 taaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaaggtgaagaaagtcgcaaaatactggattttag 22645821  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    |||||||||||| ||||| ||||||    
T  22645822 gatttaagtcgggattttgacaaca 22645846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 706 - 830
Target Start/End: Original strand, 27340182 - 27340306
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    ||||| |||||||| ||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||||||| ||||||||||||| ||||  | |    
T  27340182 gaaatattaaaatctcaatcaaaatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataa 27340281  T
Q  806 attttaagatttaagtcggaatttt 830  Q
    |||||| |||||||||||| |||||    
T  27340282 attttatgatttaagtcgggatttt 27340306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 21059152 - 21059282
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||||||| |||| ||      
T  21059152 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctag 21059250  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||| |||| ||||| ||||||    
T  21059251 attttaggatttaaatcgggattttgacaaca 21059282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 707 - 837
Target Start/End: Original strand, 23172425 - 23172559
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggat----tttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattc 802  Q
    ||||| ||||||||| |||||||||||| |||    ||||  |||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||| |    
T  23172425 aaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctattttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcc 23172524  T
Q  803 tgaattttaagatttaagtcggaattttaacaaca 837  Q
    | ||||||| |||||||||||| ||||| ||||||    
T  23172525 taaattttaggatttaagtcgggattttgacaaca 23172559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 38158250 - 38158381
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||  ||| ||||||| ||||||||||  |||||| |||||||||| ||||||||||| |||||| || ||||||||||| |||| ||      
T  38158250 gaaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctag 38158349  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||||||||| ||||||    
T  38158350 attttaggatttaagtcggaattttgacaaca 38158381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 427 - 493
Target Start/End: Complemental strand, 18844068 - 18844002
Alignment:
Q  427 aggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcg 18844002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 706 - 821
Target Start/End: Original strand, 41688661 - 41688775
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| | ||| ||||||  |||| |||||||||||||||||||| | || ||| || ||    
T  41688661 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaagaaaattgc-aaaatccga 41688759  T
Q  806 attttaagatttaagt 821  Q
    |||||| |||||||||    
T  41688760 attttaggatttaagt 41688775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 426 - 491
Target Start/End: Original strand, 6852341 - 6852406
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  6852341 aaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaat 6852406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 41688439 - 41688508
Alignment:
Q  424 taaaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  41688439 taaaggttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcg 41688508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 706 - 790
Target Start/End: Complemental strand, 19979732 - 19979648
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaa 790  Q
    |||||| ||||||||||||||||||| ||||||||||| | |||| ||||||||| ||| |||||||||||||||| ||||||||    
T  19979732 gaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttgggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 15051870 - 15051939
Alignment:
Q  424 taaaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||| |||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||    
T  15051870 taaaggttatcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcg 15051939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 41427773 - 41427706
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||| |||||||||||  ||||||||||| |||||||||| |||||||||||||||    
T  41427773 aaggttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcg 41427706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 20321297 - 20321230
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||| |||||| |||||| ||||||||    
T  20321297 aaggttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcg 20321230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 43235222 - 43235155
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||| |||||||||||||  | |||||||||||||||||||||| |||| ||||||||    
T  43235222 aaggttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcg 43235155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 23172219 - 23172267
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaa 474  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  23172219 aaggttgtcaaaatcggaactttacttcaggttgaaagggaatagcaaa 23172267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 18051308 - 18051375
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||| |||||| ||||| ||| |||||    
T  18051308 aaggtagtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcg 18051375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 27339962 - 27340013
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    ||||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  27339962 aaggttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatc 27340013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 426 - 491
Target Start/End: Original strand, 22645502 - 22645567
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||||||||| |||| |||||||||| |||| |||||||||||||||||   ||||||||||||    
T  22645502 aaggttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaat 22645567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 19579298 - 19579230
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaat-agcaaaatcaggactcgtaaaatcg 493  Q
    ||||| ||||||||||||| ||||||||||||||||||||| | ||||||||  |||||| ||||||||    
T  19579298 aaggtagtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcg 19579230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 708 - 790
Target Start/End: Complemental strand, 20321074 - 20320992
Alignment:
Q  708 aatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaa 790  Q
    |||| |||||||||||||||| | |||| |||||   |||||| | ||| |||||||||||| |||| |||||||||||||||    
T  20321074 aatcgtaaaatcgcaatcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggtgaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 765 - 837
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  765 gatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||||||||||||||||||||||| | ||||  | |||||||  |||||||| || ||||| ||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 19042206 - 19042269
Alignment:
Q  429 gttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatc 492  Q
    |||||||| ||| ||||||| ||  ||||||||||| |||||||||||  ||||||||||||||    
T  19042206 gttgtcaatatcaggactttgctctaggtcgaaaggaaatagcaaaatagggactcgtaaaatc 19042269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 26021665 - 26021614
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    ||||||||||||||||||| ||| ||||||| | |||||||| |||||||||    
T  26021665 aaggttgtcaaaatcgggattttgcttcaggccaaaagggaagagcaaaatc 26021614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 426 - 476
Target Start/End: Original strand, 13341472 - 13341522
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaat 476  Q
    ||||||||||||||||||| ||| |||||  |||||||||||||| |||||    
T  13341472 aaggttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaat 13341522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 819
Target Start/End: Complemental strand, 24106714 - 24106661
Alignment:
Q  766 atttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaa 819  Q
    |||||||||||||  |||||||||||| || |||| |||||||||| |||||||    
T  24106714 atttgagtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaa 24106661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 34703023 - 34702982
Alignment:
Q  425 aaaggttgtcaaaatcgggactttacttcaggtcgaaaggga 466  Q
    ||||||||||||||||| || ||||||||| |||||||||||    
T  34703023 aaaggttgtcaaaatcgagattttacttcaagtcgaaaggga 34702982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 9e-42; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 29067417 - 29067286
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||| ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29067417 gaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 29067318  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  ||||||||||| ||||| ||||||    
T  29067317 attttagaatttaagtcgggattttgacaaca 29067286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 20756172 - 20756041
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||| ||||||||||||||| |||||||| ||||||  |||||||||||||||||||||| ||||||||||||||| |||| |||| ||||    
T  20756172 gaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctga 20756073  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  ||||||||||| ||||| ||||||    
T  20756072 attttataatttaagtcgggattttgacaaca 20756041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 28745903 - 28745772
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||| ||||||  ||||||  |||||||||||| |||||||||||||||||||||||||||||| |||| || |    
T  28745903 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 28745804  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||| |||| ||||| ||||||    
T  28745803 attttaggatttaaatcgggattttgacaaca 28745772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 714 - 832
Target Start/End: Complemental strand, 21963554 - 21963436
Alignment:
Q  714 aaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 813  Q
    |||||||| ||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||  ||||  ||||||||| |    
T  21963554 aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttagg 21963455  T
Q  814 atttaagtcggaattttaa 832  Q
    ||||||||||| |||||||    
T  21963454 atttaagtcgggattttaa 21963436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 714 - 832
Target Start/End: Complemental strand, 21985990 - 21985872
Alignment:
Q  714 aaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 813  Q
    |||||||| ||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||  ||||  ||||||||| |    
T  21985990 aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttagg 21985891  T
Q  814 atttaagtcggaattttaa 832  Q
    ||||||||||| |||||||    
T  21985890 atttaagtcgggattttaa 21985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 713 - 822
Target Start/End: Original strand, 30727694 - 30727803
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    ||||||||||||||||||||||| ||||||  |||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||| | |||||||    
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  813 gatttaagtc 822  Q
    ||||||||||    
T  30727794 gatttaagtc 30727803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 3449288 - 3449418
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||| |||||| ||||||||||| |||||| |||||||||||| ||||| || |||||||||| ||||||||||| |||| ||||    
T  3449288 gaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaaggtaaagaaagtcgcaaaatcctga 3449386  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  3449387 attttaggatttaagtcgggattttgacaaca 3449418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 8156126 - 8156258
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttg-cttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctg 804  Q
    |||||| |||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||| ||| |||  ||||||||    
T  8156126 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctg 8156225  T
Q  805 aattttaagatttaagtcggaattttaacaaca 837  Q
    |||||||  |||||||| || ||||| ||||||    
T  8156226 aattttagaatttaagttgggattttgacaaca 8156258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 706 - 836
Target Start/End: Complemental strand, 39428035 - 39427905
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||||| ||||  |||||| |||||||||||| |||||||||||||||| ||||||||||| || |||| | |     
T  39428035 gaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccagg 39427936  T
Q  806 attttaagatttaagtcggaattttaacaac 836  Q
    ||||||| |||||| |||| ||||| |||||    
T  39427935 attttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 693 - 837
Target Start/End: Original strand, 24649671 - 24649816
Alignment:
Q  693 tgcgattttgtatgaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttgga-ttctactatggatttgagtcgttgaaggtgaagaaag 791  Q
    |||||| |||||||||||| ||||||| || ||||||| |||| |||||||||  ||||||| ||||||||||||||||||||||||||||||||| |||    
T  24649671 tgcgatattgtatgaaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaag 24649770  T
Q  792 tcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||   |||| ||  |||||| |||||||||||| ||||| ||||||    
T  24649771 tcaaaaaatcctagattttacgatttaagtcgggattttgacaaca 24649816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 706 - 830
Target Start/End: Complemental strand, 17064454 - 17064330
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||| |||||||||| ||||||  |||||| | ||||||||||| ||| ||||||||||||||||| | | |||| |||| ||||    
T  17064454 gaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctga 17064355  T
Q  806 attttaagatttaagtcggaatttt 830  Q
    ||||||||||||||||||| |||||    
T  17064354 attttaagatttaagtcgggatttt 17064330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 714 - 837
Target Start/End: Complemental strand, 22137403 - 22137280
Alignment:
Q  714 aaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 813  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||  | ||  ||||||||| |    
T  22137403 aaaatcgcaattaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttagg 22137304  T
Q  814 atttaagtcggaattttaacaaca 837  Q
    ||||||||| | ||||||| ||||    
T  22137303 atttaagtcaggattttaaaaaca 22137280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 24620196 - 24620330
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcg---cgaaattc 802  Q
    |||||| |||||| ||||| |||||||||| ||||||| ||||||  ||||||||| || |||||||||||||||||||||||||||||   | ||||      
T  24620196 gaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatct 24620295  T
Q  803 tgaattttaagatttaagtcggaattttaacaaca 837  Q
    | ||||||| |||||||||||||||||| ||||||    
T  24620296 taaattttaggatttaagtcggaattttgacaaca 24620330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 713 - 800
Target Start/End: Original strand, 22494784 - 22494871
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaat 800  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||||| |||| |||||||||||||||| |||||||| ||||    
T  22494784 taaaatcgcaatcaaaatcgatgaattttgtttattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaat 22494871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 426 - 490
Target Start/End: Original strand, 24649524 - 24649588
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaa 490  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  24649524 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 28746130 - 28746063
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||||||||    
T  28746130 aaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcg 28746063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 735 - 825
Target Start/End: Original strand, 15806531 - 15806621
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcgga 825  Q
    ||||||||| | |||| ||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| ||| || |||||||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtcgga 15806621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 706 - 830
Target Start/End: Original strand, 22356048 - 22356173
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtg-aagaaagtcgcgaaattctg 804  Q
    |||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||  | | ||||||| || || ||| ||   |||| |||    
T  22356048 gaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaaaaatcttaaaatcctg 22356147  T
Q  805 aattttaagatttaagtcggaatttt 830  Q
    ||||||| ||||||||||||||||||    
T  22356148 aattttaggatttaagtcggaatttt 22356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 8592174 - 8592241
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||||    
T  8592174 aaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcg 8592241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 22355841 - 22355908
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  22355841 aaggttctcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcg 22355908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 735 - 837
Target Start/End: Complemental strand, 27676460 - 27676358
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    ||||||| | |||||| ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||| |||||| |||||||||| | ||||| |||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  835 aca 837  Q
    |||    
T  27676360 aca 27676358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 426 - 492
Target Start/End: Complemental strand, 29067630 - 29067564
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatc 492  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| | |||| |||||||    
T  29067630 aaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatc 29067564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 429 - 493
Target Start/End: Complemental strand, 39428258 - 39428194
Alignment:
Q  429 gttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||| ||||||||    
T  39428258 gttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcg 39428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 20766676 - 20766743
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||||||||||||||  ||||||| || ||||||||||  ||||||||||||||    
T  20766676 aaggttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcg 20766743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 24619972 - 24620039
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||||||  ||||| |||||||||    
T  24619972 aaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcg 24620039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 760 - 837
Target Start/End: Complemental strand, 28135801 - 28135724
Alignment:
Q  760 ctatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||||||||||||||  |||| ||||| |||||||| |||| |||||||||| ||||||| |||||||||| ||||||    
T  28135801 ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaaca 28135724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 433 - 493
Target Start/End: Complemental strand, 3041570 - 3041510
Alignment:
Q  433 tcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcg 3041510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 745 - 837
Target Start/End: Complemental strand, 17796471 - 17796379
Alignment:
Q  745 tatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||| ||||| |||||||| ||||||| |||| |||||||  |||| ||  |||||| |||||||||||||||||| ||||||    
T  17796471 tattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaaca 17796379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 745 - 837
Target Start/End: Complemental strand, 19104911 - 19104819
Alignment:
Q  745 tatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||| ||||| |||||||| ||||||| |||| |||||||  |||| ||  |||||| |||||||||||||||||| ||||||    
T  19104911 tattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaaca 19104819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 706 - 766
Target Start/End: Complemental strand, 42696980 - 42696920
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatgga 766  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||    
T  42696980 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 8560232 - 8560299
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| |||||||||||||||||||||| ||| ||||||| ||||||||||  ||||||| ||||||    
T  8560232 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcg 8560299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 425 - 478
Target Start/End: Original strand, 6860985 - 6861038
Alignment:
Q  425 aaaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatca 478  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||    
T  6860985 aaaggttgtcaaaattgggattttgcttcaggtcgaaagggaatagtaaaatca 6861038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 735 - 786
Target Start/End: Original strand, 10872971 - 10873022
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaa 786  Q
    ||||||||| ||||||  |||||| |||||||||||||||||||||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaa 10873022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 18014345 - 18014278
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| |||||||||||||||||||||| ||  ||| ||| |||||||||  |||||||||||||||    
T  18014345 aaggttatcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcg 18014278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 25870363 - 25870503
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaat-----cgatggattttgcttatttttggattctactatggatttgag----tcgttgaaggtgaagaaagtcgcg 796  Q
    |||||| ||||||||||||||||||     ||||||||||||| ||||||  | |||||||| | |||||||    ||||||||| ||||||||||| |     
T  25870363 gaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagatgaagaaagtcaca 25870462  T
Q  797 aaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||  || |||||| |||||||||||  ||||| ||||||    
T  25870463 aaatcttggattttaggatttaagtcgagattttgacaaca 25870503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 41671533 - 41671482
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    ||||||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  41671533 aaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatc 41671482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 735 - 837
Target Start/End: Complemental strand, 13006031 - 13005929
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    ||||||||| | |||| ||||| | ||||||||||||   ||| |||||||| |||||||| ||||| |||||||| | ||||||||||  ||||| |||    
T  13006031 ggattttgcatgttttgggattttgctatggatttgaaatgttaaaggtgaataaagtcgcaaaattatgaattttgaaatttaagtcgagattttgaca 13005932  T
Q  835 aca 837  Q
    |||    
T  13005931 aca 13005929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 745 - 835
Target Start/End: Complemental strand, 17796362 - 17796272
Alignment:
Q  745 tatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 835  Q
    |||||| ||||||| ||||| |||| ||| |||||||||||| |||||| | |||| ||  |||||| ||||||||| |||||||| ||||    
T  17796362 tattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 17796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 745 - 835
Target Start/End: Complemental strand, 19104802 - 19104712
Alignment:
Q  745 tatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 835  Q
    |||||| ||||||| ||||| |||| ||| |||||||||||| |||||| | |||| ||  |||||| ||||||||| |||||||| ||||    
T  19104802 tattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 19104712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 427 - 493
Target Start/End: Complemental strand, 19348906 - 19348840
Alignment:
Q  427 aggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||| ||||||| | |||||||||||| ||| ||||||| ||||||||||  ||||||||||||||    
T  19348906 aggttatcaaaattgagactttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcg 19348840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 425 - 478
Target Start/End: Original strand, 10872489 - 10872542
Alignment:
Q  425 aaaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatca 478  Q
    |||||||||||||||| ||| ||||||||||||| |||||||| || |||||||    
T  10872489 aaaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatca 10872542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 429 - 493
Target Start/End: Original strand, 30727636 - 30727701
Alignment:
Q  429 gttgtcaaaatcgggacttt-acttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||| |||||| ||||||| ||||||||| |||||||||||||||||||  ||||| ||||||||    
T  30727636 gttgttaaaatctggacttttacttcaggttgaaagggaatagcaaaatcgagactcctaaaatcg 30727701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 745 - 837
Target Start/End: Complemental strand, 17796580 - 17796488
Alignment:
Q  745 tatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||| ||||| |||| ||| |||||||||||| |||||||  |||| ||  |||||| ||||||| ||| |||||| ||||||    
T  17796580 tattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaaca 17796488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 745 - 837
Target Start/End: Complemental strand, 19105020 - 19104928
Alignment:
Q  745 tatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||| ||||| |||| ||| |||||||||||| |||||||  |||| ||  |||||| ||||||| ||| |||||| ||||||    
T  19105020 tattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaaca 19104928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 15806223 - 15806274
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    |||||||||||||||| || ||| |||||| ||||||||||| |||||||||    
T  15806223 aaggttgtcaaaatcgagattttgcttcagctcgaaagggaaaagcaaaatc 15806274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 488
Target Start/End: Original strand, 21553671 - 21553730
Alignment:
Q  429 gttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaa 488  Q
    ||||| ||||||||||||||||||||  |||||||||| ||| |||||| ||||| ||||    
T  21553671 gttgtaaaaatcgggactttacttcaaatcgaaagggagtagaaaaatcgggactggtaa 21553730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 22971162 - 22971096
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| ||||||| |||||||||||||| ||  ||||| | |||||||||| |||||||||||||||    
T  22971162 aaggttatcaaaattgggactttacttcaagttaaaagg-agtagcaaaatcgggactcgtaaaatcg 22971096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 433 - 491
Target Start/End: Complemental strand, 9169942 - 9169884
Alignment:
Q  433 tcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||||||| ||||||||||| ||||||||| | |||||||||  |||| ||||||||    
T  9169942 tcaaaatcggaactttacttcaagtcgaaaggaagtagcaaaattgggacccgtaaaat 9169884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 430 - 476
Target Start/End: Complemental strand, 13006174 - 13006129
Alignment:
Q  430 ttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaat 476  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  13006174 ttgtcaaaatcggga-tttgctttaggtcgaaagggaatagcaaaat 13006129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 426 - 476
Target Start/End: Complemental strand, 27090796 - 27090746
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaat 476  Q
    ||||||||| |||||| || ||||||| ||||||||||||||||| |||||    
T  27090796 aaggttgtcgaaatcgagattttactttaggtcgaaagggaatagaaaaat 27090746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 9e-42; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 23528789 - 23528658
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  23528789 gaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 23528690  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||||||||||||| || ||||| ||||||    
T  23528689 attttaagatttaagttgggattttgacaaca 23528658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 9955031 - 9955162
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||| |||| || |    
T  9955031 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaa 9955130  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||||| || ||||| ||||||    
T  9955131 attttaggatttaagttgggattttgacaaca 9955162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 19009942 - 19010073
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| |||| ||||||||||| |||||||| |||| ||||    
T  19009942 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctga 19010041  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||| | ||||| ||||||    
T  19010042 attttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 41032673 - 41032797
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||     
T  41032673 taaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctgaattctac 41032772  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    |||||||||||  ||||| ||||||    
T  41032773 gatttaagtcgagattttgacaaca 41032797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 9327211 - 9327342
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||||||||||  |||||| ||||| |||||| |||||||||||||||||||| |||||||||| |||  || |    
T  9327211 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaa 9327310  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||| | ||||||||||||    
T  9327311 attttaggatttaagtcaggattttaacaaca 9327342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 12513414 - 12513283
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||| ||||||||||||| |||| ||      
T  12513414 gaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctag 12513315  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||| || |||||||||||| ||||| ||||||    
T  12513314 attgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 693 - 819
Target Start/End: Original strand, 17055982 - 17056108
Alignment:
Q  693 tgcgattttgtatgaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagt 792  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||   |||||||||||||| |||||||||||||||| ||||| |    
T  17055982 tgcgattttgtatgaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaat 17056081  T
Q  793 cgcgaaattctgaattttaagatttaa 819  Q
     || |||| ||| |||||| |||||||    
T  17056082 tgcaaaatcctggattttaggatttaa 17056108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 21846271 - 21846395
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||||||||||||||||||||||||   ||||||  |||||||||||||||||||||||||||||||||| |||||||| |||| ||| ||||||     
T  21846271 taaaatcgcaatcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttag 21846370  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    ||||||| |||| ||||| ||||||    
T  21846371 gatttaactcgggattttgacaaca 21846395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 13276262 - 13276393
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||  |||||||||| ||||||||||||| |||| ||      
T  13276262 gaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttaggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctag 13276361  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||| |||| ||||| ||||||    
T  13276362 attttaggatttaaatcgggattttgacaaca 13276393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 715 - 837
Target Start/End: Original strand, 25146773 - 25146895
Alignment:
Q  715 aaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaaga 814  Q
    |||||||||| ||||| |||| | ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  25146773 aaatcgcaattaaaattgatgtactttgtctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttagga 25146872  T
Q  815 tttaagtcggaattttaacaaca 837  Q
    |||||||| | ||||| ||||||    
T  25146873 tttaagtcaggattttgacaaca 25146895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 9352059 - 9352190
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||| ||||||||  |||||| ||| ||| |||| |||||||||| |||||||||||||||||||| |||  |||     
T  9352059 gaaatcataaaatcgcaatcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctgg 9352158  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  9352159 attttaggatttaagtcgggattttgacaaca 9352190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 713 - 835
Target Start/End: Complemental strand, 13100317 - 13100195
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||  |||| ||  ||||||     
T  13100317 taaaatcgcaatcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttag 13100218  T
Q  813 gatttaagtcggaattttaacaa 835  Q
     |||||||| || ||||| ||||    
T  13100217 aatttaagttgggattttgacaa 13100195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 715 - 837
Target Start/End: Original strand, 18304815 - 18304938
Alignment:
Q  715 aaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcg-ttgaaggtgaagaaagtcgcgaaattctgaattttaag 813  Q
    |||||||||||||||| |||||||||||  ||||||  |||||||||||| |||||||||| |||||||||||||||||||| |||| ||| |||||| |    
T  18304815 aaatcgcaatcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttagg 18304914  T
Q  814 atttaagtcggaattttaacaaca 837  Q
    |||||||| || ||||| ||||||    
T  18304915 atttaagttgggattttgacaaca 18304938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 42180061 - 42180192
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| || |||| ||||||||||||||| ||||||| ||||||   |||||||||||||||||| |||||||||| |||||||||||| |||| ||||    
T  42180061 gaaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctga 42180160  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  |||||||| || ||||| ||||||    
T  42180161 attttagaatttaagttgggattttgacaaca 42180192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 707 - 822
Target Start/End: Original strand, 16125452 - 16125570
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtg---aagaaagtcgcgaaattct 803  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||  |||| ||||||||||||  |||||||||||||   ||||||||||| |||| ||    
T  16125452 aaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcct 16125551  T
Q  804 gaattttaagatttaagtc 822  Q
    |||||||| ||||||||||    
T  16125552 gaattttaggatttaagtc 16125570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 9128836 - 9128967
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| | ||||||||||||||||||||| ||||||  ||||||  |||||||||||  |||||||||||| || |||||||||||||| | || || |    
T  9128836 gaaatcgtcaaatcgcaatcaaaatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaa 9128935  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
     ||||| |||||||||||  ||||||||||||    
T  9128936 tttttaggatttaagtcgtgattttaacaaca 9128967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 9351838 - 9351905
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9351838 aaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcg 9351905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 13100544 - 13100477
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||    
T  13100544 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcg 13100477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 17869746 - 17869872
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||| |||||||||||||| | ||||||| |||||| |||||||||| |||||||  ||||| |||||||||||||||||| |||| |       
T  17869746 gaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcc--- 17869842  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
      ||||||||||||||| | ||||| ||||||    
T  17869843 --tttaagatttaagtcaggattttgacaaca 17869872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 427 - 493
Target Start/End: Original strand, 21846050 - 21846116
Alignment:
Q  427 aggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcg 21846116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 9954771 - 9954822
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9954771 aaggttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaatc 9954822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 434 - 493
Target Start/End: Original strand, 9954816 - 9954875
Alignment:
Q  434 caaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcg 9954875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 25146543 - 25146610
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||| | | |||||||||||    
T  25146543 aaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcg 25146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 426 - 476
Target Start/End: Original strand, 14074258 - 14074308
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaat 476  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14074258 aaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaat 14074308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 13276038 - 13276098
Alignment:
Q  430 ttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  13276038 ttgtcaaaatcgggactttact---ggtcgaaagagaatagcaaaatcaggactcgtaaaatcg 13276098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 428 - 493
Target Start/End: Original strand, 16125232 - 16125297
Alignment:
Q  428 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  16125232 ggttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcg 16125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 428 - 493
Target Start/End: Original strand, 17197306 - 17197371
Alignment:
Q  428 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||| | |||||||||||||    
T  17197306 ggttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcg 17197371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 764 - 837
Target Start/End: Complemental strand, 30619150 - 30619077
Alignment:
Q  764 ggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||||||||||||||||||||| |||| |||| ||| |||||| |||||||||||| ||||| ||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaaca 30619077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 735 - 837
Target Start/End: Original strand, 18337547 - 18337648
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    ||||||||| |||||| || |||| ||||||||||||||||||||||||||| ||||| || |||| ||| ||||| || | |||||||| ||||| |||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggatttt-aggtataagtcgggattttgaca 18337645  T
Q  835 aca 837  Q
    |||    
T  18337646 aca 18337648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 443 - 493
Target Start/End: Original strand, 19009740 - 19009790
Alignment:
Q  443 gactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  19009740 gactttacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcg 19009790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 752 - 837
Target Start/End: Original strand, 12800623 - 12800708
Alignment:
Q  752 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||| |||||| |||||||||||||||| |||||||||||||  |||| || ||||||| ||||||||| || ||||| ||||||    
T  12800623 ggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaaca 12800708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 753 - 837
Target Start/End: Original strand, 14074413 - 14074497
Alignment:
Q  753 gattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||| ||||||||||||||||||  ||||||||||||| |||| ||  |||||| |||||||| ||| ||||| ||||||    
T  14074413 gattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaaca 14074497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 773 - 837
Target Start/End: Original strand, 34478833 - 34478897
Alignment:
Q  773 tcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||||||||||||||| | |||| |  |||||||||||||||||||| ||||||||||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaaca 34478897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 17055695 - 17055761
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||| |||||||| |||||||||||| || | |||||| |||||||||||||||    
T  17055695 aaggttgtcaaaatcgggtctttactt-aggtcgaaaggggattgtaaaatcgggactcgtaaaatcg 17055761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 17869529 - 17869592
Alignment:
Q  430 ttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||| || |||||||| |||||||| ||||||||| |||| ||||||||||    
T  17869529 ttgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcg 17869592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 18304593 - 18304644
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  18304593 aaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaatc 18304644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 706 - 741
Target Start/End: Complemental strand, 13100426 - 13100391
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggatttt 741  Q
    ||||||||||||||||||||||||||||||||||||    
T  13100426 gaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 428 - 476
Target Start/End: Original strand, 12002638 - 12002686
Alignment:
Q  428 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaat 476  Q
    |||||||||||||||||||||| || | ||||||||||| |||||||||    
T  12002638 ggttgtcaaaatcgggactttaatttaagtcgaaagggagtagcaaaat 12002686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 706 - 762
Target Start/End: Complemental strand, 18228333 - 18228278
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctacta 762  Q
    |||||| ||||||| |||||||||| |||||||||||| |||||| |||||||||||    
T  18228333 gaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattctacta 18228278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 706 - 750
Target Start/End: Complemental strand, 32881460 - 32881416
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttt 750  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  32881460 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 32881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 493
Target Start/End: Complemental strand, 8773613 - 8773555
Alignment:
Q  432 gtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||| |||||||||| | ||||||||||||||||| |||   ||||||||||||||    
T  8773613 gtcaaaatcgagactttacttaaagtcgaaagggaatagcagaat---gactcgtaaaatcg 8773555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 23529010 - 23528943
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||| |||||| |||||||  ||| |||| || || ||| |||||||||||||||    
T  23529010 aaggttgtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcg 23528943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 30619294 - 30619244
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    ||||||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  30619294 aaggttgtcaaaatcgggatttt-cttcaggtcgaaagagaagagcaaaatc 30619244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 735 - 824
Target Start/End: Complemental strand, 8772809 - 8772719
Alignment:
Q  735 ggattttg-cttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcgg 824  Q
    |||||||| ||| |||| ||| ||| |||||||||||||| ||||||| |  | |||||||| |||||||| |||||  ||||||||||||    
T  8772809 ggattttgtctttttttgggactctgctatggatttgagttgttgaagctacacaaagtcgcaaaattctggattttgggatttaagtcgg 8772719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 426 - 476
Target Start/End: Original strand, 41032548 - 41032598
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaat 476  Q
    |||||||||||||| |||| |||||||||||| ||||| ||| ||||||||    
T  41032548 aaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaat 41032598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 1e-40; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 693 - 837
Target Start/End: Original strand, 25539209 - 25539353
Alignment:
Q  693 tgcgattttgtatgaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagt 792  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| |    
T  25539209 tgcgattttgtatgaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaat 25539308  T
Q  793 cgcgaaattc-tgaattttaagatttaagtcggaattttaacaaca 837  Q
     || |||||| ||||||||| ||||||| |||| ||||||||||||    
T  25539309 tgc-aaattcttgaattttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 31237973 - 31238104
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||  |||||||||||| ||||||||||||||||||||||||||| || |||| ||      
T  31237973 gaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctag 31238072  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  31238073 attttaggatttaagtcgggattttgacaaca 31238104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 23863324 - 23863448
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    ||||||||||| ||||||||||||||||||| ||||||  ||||||||||||||||| |||||||||| |||||||||||||| |||||||  ||||||     
T  23863324 taaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattttag 23863423  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
     ||||||||||| ||||| ||||||    
T  23863424 aatttaagtcgggattttgacaaca 23863448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 1404916 - 1404785
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||| ||||||||||||||||||||||| || ||| ||||||||| |||||||| ||||||||||||||||||||||| | |||| || |    
T  1404916 gaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaa 1404817  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  ||||||||||| ||||| ||||||    
T  1404816 attttagaatttaagtcgggattttgacaaca 1404785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 35565950 - 35566081
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||  |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||  ||||||||||||| |||| ||||    
T  35565950 gaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctga 35566049  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||  ||||||||| || ||||| ||||||    
T  35566050 attttgtgatttaagttgggattttgacaaca 35566081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 707 - 837
Target Start/End: Complemental strand, 31578136 - 31578007
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaa 806  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||| | |||||||||||||||||| |||| ||||  | ||    
T  31578136 aaatcgtaaaattgcaatcaaaattgatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaa 31578038  T
Q  807 ttttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||||||| ||||| ||||||    
T  31578037 ttttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 703 - 830
Target Start/End: Original strand, 15588843 - 15588969
Alignment:
Q  703 tatgaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattc 802  Q
    ||||||||| |||||||||||| |||| |||| |||||||  ||||||  |||||||||||| |||||||| ||||||||||||||||| ||| |||| |    
T  15588843 tatgaaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcc 15588942  T
Q  803 tgaattttaagatttaagtcggaatttt 830  Q
    |||||||||||| ||||||||| |||||    
T  15588943 tgaattttaaga-ttaagtcgggatttt 15588969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 36429981 - 36429850
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| || |||||||||||||||||||||||||||| ||||||  |||||| ||||| | |||||||||||||||||||||||||||| |||| ||      
T  36429981 gaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctag 36429882  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||| || ||||||||| || ||||| ||||||    
T  36429881 attataggatttaagttgggattttgacaaca 36429850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 706 - 794
Target Start/End: Complemental strand, 30432552 - 30432464
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcg 794  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  30432552 gaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatggatttgagtcgttgaaggcgaagaaagtcg 30432464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 733 - 837
Target Start/End: Original strand, 1690785 - 1690889
Alignment:
Q  733 atggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaa 832  Q
    |||| |||||| |||||| ||||| |||||||||| |||||||| |||||||||||||||| | |||| || ||||||||||||||||||||| |||| |    
T  1690785 atgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttga 1690884  T
Q  833 caaca 837  Q
    |||||    
T  1690885 caaca 1690889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 713 - 800
Target Start/End: Complemental strand, 19491982 - 19491896
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaat 800  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||| ||| ||||||||||||| ||||    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctatttt-ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaat 19491896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 713 - 837
Target Start/End: Complemental strand, 20063840 - 20063716
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||| |||| |||||| ||||||||  ||| |||   || ||||||     
T  20063840 taaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttag 20063741  T
Q  813 gatttaagtcggaattttaacaaca 837  Q
    | |||||||||| ||||| ||||||    
T  20063740 gttttaagtcgggattttgacaaca 20063716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 20064077 - 20064010
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  20064077 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcg 20064010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 740 - 837
Target Start/End: Complemental strand, 16766809 - 16766712
Alignment:
Q  740 ttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||| ||| |||  |||| || ||||||||||||||||||  |||||| ||||||    
T  16766809 ttgcttattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaaca 16766712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 425 - 493
Target Start/End: Original strand, 25538919 - 25538987
Alignment:
Q  425 aaaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| |||||| || ||||||||||||    
T  25538919 aaaggttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcg 25538987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 19262091 - 19262158
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||| ||||||| ||||||||||| |||||| ||||||||||||||| |||||||||||||||    
T  19262091 aaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcg 19262158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 21869096 - 21869163
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||    
T  21869096 aaggtcgtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcg 21869163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 436 - 493
Target Start/End: Original strand, 27523881 - 27523938
Alignment:
Q  436 aaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcg 27523938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 837
Target Start/End: Complemental strand, 17995157 - 17995057
Alignment:
Q  737 attttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaac 836  Q
    ||||||| |||||| | ||| | ||| | |||||||||||||| |||||| ||| |||| |||||||| |||||| | ||||||||||||||||||||||    
T  17995157 attttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaac 17995058  T
Q  837 a 837  Q
    |    
T  17995057 a 17995057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 433 - 493
Target Start/End: Original strand, 20034004 - 20034064
Alignment:
Q  433 tcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||    
T  20034004 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcg 20034064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 30433169 - 30433102
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||||||||||||||||| |||||||||||||||| | ||||| |||||| |||||| ||||||||    
T  30433169 aaggttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcg 30433102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 31237755 - 31237818
Alignment:
Q  430 ttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||| |||||||||||||| || ||||||||||| |||||| |||||||||||||||    
T  31237755 ttgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcg 31237818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 425 - 493
Target Start/End: Complemental strand, 1405138 - 1405070
Alignment:
Q  425 aaaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||| ||||||| || ||||| |||||||||||||||||| | |||| ||||||||    
T  1405138 aaaggttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcg 1405070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 19245943 - 19245876
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    ||||||||||||||||||| ||| ||||| || ||||||||||||||||||||  | |||||||||||    
T  19245943 aaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcg 19245876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 737 - 800
Target Start/End: Complemental strand, 31023325 - 31023262
Alignment:
Q  737 attttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaat 800  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaat 31023262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 426 - 491
Target Start/End: Complemental strand, 7302136 - 7302071
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||| |||||||||||||||||||||| || ||| |||  |||||||||| |||||||||||||    
T  7302136 aaggttatcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaat 7302071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 974693 - 974625
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcag-gactcgtaaaatcg 493  Q
    |||||| |||| ||||||||||||||||| ||||||||||| |||||||||| |  |||||||||||||    
T  974693 aaggttatcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcg 974625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 478
Target Start/End: Complemental strand, 8428576 - 8428524
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatca 478  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||    
T  8428576 aaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatca 8428524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 761 - 837
Target Start/End: Original strand, 15516610 - 15516686
Alignment:
Q  761 tatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||| |||||| | |||||||||||| |||||||| |||| |||||| ||||||||||||| |  ||||||||||||    
T  15516610 tatgaatttgaattgttgaaggtgaataaagtcgcaaaatgctgaatattaagatttaagttgcgattttaacaaca 15516686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 736 - 812
Target Start/End: Complemental strand, 34841659 - 34841583
Alignment:
Q  736 gattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 812  Q
    |||||||| | |||| | ||||| ||||||||||||||||||||||||||| ||||||||  ||| || ||||||||    
T  34841659 gattttgcatgttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaattttaa 34841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 736 - 837
Target Start/End: Original strand, 5395674 - 5395775
Alignment:
Q  736 gattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 835  Q
    |||||||| ||||||  |||||| ||||||||||||||| || ||| |||| |||||||| |||| ||  |||||| |||||| |||  |||||| ||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaa 5395773  T
Q  836 ca 837  Q
    ||    
T  5395774 ca 5395775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 741
Target Start/End: Original strand, 13502566 - 13502601
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggatttt 741  Q
    |||||| |||||||||||||||||||||||||||||    
T  13502566 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 736 - 837
Target Start/End: Complemental strand, 8428245 - 8428144
Alignment:
Q  736 gattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 835  Q
    |||||||| ||||||  |||||| ||||| ||||||||| || ||||| |  ||| |||| ||||| | |||||||||||| || || ||||||| ||||    
T  8428245 gattttgcctattttaagattctcctatgaatttgagtcattaaaggtaagtaaaatcgcaaaattttaaattttaagattgaattctgaattttgacaa 8428146  T
Q  836 ca 837  Q
    ||    
T  8428145 ca 8428144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 837
Target Start/End: Complemental strand, 19245232 - 19245155
Alignment:
Q  760 ctatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    |||||||||||| ||| | ||| |||  |||||||  |||| ||||||||||| ||||||||||| ||||| ||||||    
T  19245232 ctatggatttgaatcgctaaagatgagtaaagtcgtaaaatcctgaattttaaaatttaagtcgggattttgacaaca 19245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 706 - 837
Target Start/End: Complemental strand, 8576 - 8445
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||||||| ||||  ||     
T  8576 gaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtgg 8477  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| ||||||||| || ||||| ||||||    
T  8476 attttaggatttaagtagggattttgacaaca 8445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 426 - 493
Target Start/End: Complemental strand, 8795 - 8728
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  8795 aaggttctcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcg 8728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 7451 - 7582
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||   ||||||||||| ||||||||||| |||| ||||    
T  7451 gaaatcgtaaaatcgcaattaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctga 7550  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    ||||||  ||||||||||| ||| ||||||||    
T  7551 attttagaatttaagtcgggattctaacaaca 7582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 713 - 837
Target Start/End: Original strand, 103 - 228
Alignment:
Q  713 taaaatcgcaatcaaaatcgatggatttt-gcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaatttta 811  Q
    ||||||| ||||||||||||||||||||| || |||||| | ||| ||||||||||||||||||||||| |||||||||||||| |||| ||| ||||||    
T  103 taaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcatttta 202  T
Q  812 agatttaagtcggaattttaacaaca 837  Q
     |||||||||||| || ||| |||||    
T  203 ggatttaagtcgggatcttatcaaca 228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 65; Significance: 5e-28; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 706 - 837
Target Start/End: Original strand, 93702 - 93831
Alignment:
Q  706 gaaatcttaaaatcgcaatcaaaatcgatggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctga 805  Q
    |||||| |||||||||||||||||||||||||||| || |||||| | ||||| |||||||||||||| ||||| |||||||||| |  | ||||||||     
T  93702 gaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctgg 93799  T
Q  806 attttaagatttaagtcggaattttaacaaca 837  Q
    |||||| |||||||||||| ||||| ||||||    
T  93800 attttaggatttaagtcgggattttgacaaca 93831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 707 - 741
Target Start/End: Original strand, 93599 - 93633
Alignment:
Q  707 aaatcttaaaatcgcaatcaaaatcgatggatttt 741  Q
    ||||| |||||||||||||||||||||||||||||    
T  93599 aaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 426 - 491
Target Start/End: Original strand, 38302 - 38367
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  38302 aaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaat 38367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 736 - 781
Target Start/End: Original strand, 128985 - 129031
Alignment:
Q  736 gattttgcttatttttg-gattctactatggatttgagtcgttgaag 781  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  128985 gattttgtttatttttgagattctgctatggatttgagtcgttgaag 129031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 53; Significance: 7e-21; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 737 - 837
Target Start/End: Original strand, 48816 - 48915
Alignment:
Q  737 attttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaac 836  Q
    ||||||||| |||| |||||||  |||||||||||||||||||||||||| ||||| || |||||||  |||||| |||||||||||||||||| |||||    
T  48816 attttgctt-ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaac 48914  T

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Target: scaffold0048; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 737 - 795
Target Start/End: Original strand, 61410 - 61468
Alignment:
Q  737 attttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgc 795  Q
    |||||||||||||| |||||||  |||||||||||  ||||||||| ||| ||||||||    
T  61410 attttgcttattttgggattctcatatggatttgaaccgttgaaggcgaataaagtcgc 61468  T

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Target: scaffold0036 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 735 - 837
Target Start/End: Original strand, 37191 - 37293
Alignment:
Q  735 ggattttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 834  Q
    ||||||| | ||||||  |||||| |||||||||||||| |||||||||||| ||| | || |||||||||||||||| ||||||||||| ||||| |||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  835 aca 837  Q
    |||    
T  37291 aca 37293  T

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Target: scaffold0016 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 56200 - 56251
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatc 477  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  56200 aaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatc 56251  T

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Target: scaffold2084 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 426 - 491
Target Start/End: Complemental strand, 182 - 117
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||| |||||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||||    
T  182 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaat 117  T

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Target: scaffold0079 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 426 - 493
Target Start/End: Original strand, 14701 - 14768
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaatcg 493  Q
    |||||| ||||||||||| |||||||||| ||||||| ||| |||||||||| |||||||||||||||    
T  14701 aaggttatcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcg 14768  T

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Target: scaffold0061 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 426 - 491
Target Start/End: Original strand, 76084 - 76149
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||  | |||||||||||||    
T  76084 aaggttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaat 76149  T

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Target: scaffold0182 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 444 - 491
Target Start/End: Complemental strand, 24722 - 24675
Alignment:
Q  444 actttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  24722 actttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaat 24675  T

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Target: scaffold0115 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 754 - 837
Target Start/End: Original strand, 35103 - 35186
Alignment:
Q  754 attctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||||| ||| |||||||||||| |||||||| |||||  | ||||| |||||||||  ||||||||||  ||||| ||||||    
T  35103 attctacaatgaatttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaaca 35186  T

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Target: scaffold0603 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 837
Target Start/End: Original strand, 9049 - 9147
Alignment:
Q  739 tttgcttatttttggattctactatggatttgagtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 837  Q
    ||||| |||||  ||||| | ||||||||||||||||||||||||||| ||| || | |||| ||  ||||||| |||||| || | ||||| ||||||    
T  9049 tttgcctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaaca 9147  T

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Target: scaffold0526 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 426 - 491
Target Start/End: Complemental strand, 8510 - 8445
Alignment:
Q  426 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcaggactcgtaaaat 491  Q
    |||||| |||||||||||| ||||||| | ||||||||||| ||| |||||  |||||| ||||||    
T  8510 aaggttatcaaaatcgggagtttactttaagtcgaaagggagtagtaaaattgggactcataaaat 8445  T

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