View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15667_low_17 (Length: 319)

Name: NF15667_low_17
Description: NF15667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15667_low_17
NF15667_low_17
[»] chr7 (52 HSPs)
chr7 (169-308)||(4788019-4788172)
chr7 (20-103)||(4787870-4787953)
chr7 (184-259)||(33187878-33187953)
chr7 (195-259)||(1277911-1277976)
chr7 (170-259)||(7391428-7391516)
chr7 (184-248)||(31055359-31055423)
chr7 (184-251)||(32820263-32820330)
chr7 (184-249)||(45940432-45940498)
chr7 (184-251)||(42112991-42113058)
chr7 (179-249)||(2826274-2826345)
chr7 (184-249)||(16805599-16805665)
chr7 (194-268)||(19791655-19791729)
chr7 (182-263)||(31179997-31180078)
chr7 (184-249)||(38505366-38505432)
chr7 (25-70)||(23552340-23552385)
chr7 (194-275)||(42622319-42622400)
chr7 (180-249)||(46442692-46442761)
chr7 (185-268)||(33872144-33872228)
chr7 (186-249)||(35264906-35264970)
chr7 (195-249)||(15748992-15749047)
chr7 (194-253)||(30301966-30302025)
chr7 (195-251)||(13697263-13697320)
chr7 (25-70)||(22556577-22556622)
chr7 (184-248)||(42253942-42254007)
chr7 (197-258)||(46509252-46509312)
chr7 (198-253)||(9172486-9172542)
chr7 (188-251)||(38137922-38137986)
chr7 (194-249)||(44487359-44487415)
chr7 (203-262)||(374618-374677)
chr7 (186-264)||(17818274-17818353)
chr7 (199-264)||(21018741-21018808)
chr7 (184-263)||(22556733-22556812)
chr7 (196-258)||(38680058-38680120)
chr7 (195-262)||(39856408-39856475)
chr7 (180-243)||(42620380-42620443)
chr7 (184-243)||(46449164-46449223)
chr7 (184-249)||(4058171-4058237)
chr7 (195-249)||(4125932-4125985)
chr7 (203-249)||(10592002-10592048)
chr7 (184-249)||(43348261-43348327)
chr7 (198-251)||(46611873-46611927)
chr7 (182-262)||(23550758-23550839)
chr7 (198-251)||(24924626-24924679)
chr7 (258-295)||(31180092-31180129)
chr7 (185-249)||(34670179-34670244)
chr7 (25-70)||(40985272-40985317)
chr7 (194-268)||(6746611-6746687)
chr7 (202-253)||(9153076-9153128)
chr7 (184-251)||(17884226-17884291)
chr7 (194-250)||(23551640-23551696)
chr7 (199-258)||(30081352-30081412)
chr7 (202-268)||(41471412-41471480)
[»] chr2 (56 HSPs)
chr2 (169-301)||(11522197-11522333)
chr2 (194-263)||(39819867-39819936)
chr2 (184-266)||(31584798-31584881)
chr2 (171-263)||(9087484-9087576)
chr2 (198-265)||(14166934-14167001)
chr2 (184-249)||(1364816-1364882)
chr2 (184-249)||(11515027-11515093)
chr2 (184-257)||(15803163-15803237)
chr2 (184-249)||(21626106-21626172)
chr2 (185-254)||(30072095-30072164)
chr2 (184-295)||(44656782-44656888)
chr2 (185-268)||(15555378-15555463)
chr2 (184-249)||(30523230-30523295)
chr2 (184-248)||(34757589-34757654)
chr2 (185-249)||(37194250-37194315)
chr2 (184-268)||(43572576-43572661)
chr2 (184-263)||(5322151-5322231)
chr2 (184-259)||(12941830-12941906)
chr2 (186-253)||(36870242-36870310)
chr2 (198-261)||(3737272-3737335)
chr2 (184-243)||(41100137-41100196)
chr2 (184-249)||(26905787-26905853)
chr2 (169-247)||(35550175-35550253)
chr2 (194-263)||(37664547-37664617)
chr2 (184-249)||(40211986-40212052)
chr2 (25-70)||(11522055-11522100)
chr2 (185-263)||(27987634-27987716)
chr2 (185-263)||(28074167-28074249)
chr2 (186-268)||(4003391-4003475)
chr2 (188-251)||(16519125-16519189)
chr2 (184-251)||(21834922-21834990)
chr2 (184-243)||(32243464-32243524)
chr2 (194-253)||(44954039-44954098)
chr2 (184-249)||(13018510-13018576)
chr2 (25-103)||(15803303-15803380)
chr2 (185-243)||(38293878-38293936)
chr2 (208-265)||(5003183-5003240)
chr2 (184-249)||(6656101-6656169)
chr2 (186-238)||(3254630-3254682)
chr2 (184-243)||(30312437-30312497)
chr2 (194-269)||(36030776-36030852)
chr2 (184-243)||(13765971-13766030)
chr2 (184-243)||(19382867-19382926)
chr2 (257-295)||(39180999-39181037)
chr2 (194-263)||(42644626-42644696)
chr2 (184-240)||(8555808-8555865)
chr2 (184-263)||(26599281-26599362)
chr2 (184-268)||(31082779-31082864)
chr2 (25-66)||(36870404-36870445)
chr2 (200-268)||(39750115-39750184)
chr2 (184-260)||(39913228-39913304)
chr2 (180-243)||(18018625-18018688)
chr2 (180-243)||(25960638-25960702)
chr2 (195-227)||(28539469-28539501)
chr2 (208-256)||(39181054-39181102)
chr2 (198-251)||(39671094-39671149)
[»] chr8 (47 HSPs)
chr8 (188-266)||(41455223-41455301)
chr8 (184-267)||(28416193-28416276)
chr8 (199-290)||(31149849-31149946)
chr8 (184-257)||(1839852-1839926)
chr8 (169-262)||(44879517-44879610)
chr8 (169-262)||(44880311-44880404)
chr8 (195-259)||(13406401-13406465)
chr8 (180-251)||(40985102-40985174)
chr8 (169-259)||(27085322-27085412)
chr8 (197-258)||(5911471-5911532)
chr8 (194-263)||(8948595-8948664)
chr8 (184-268)||(21173890-21173975)
chr8 (184-268)||(23932590-23932675)
chr8 (185-268)||(39193894-39193979)
chr8 (171-258)||(10589778-10589866)
chr8 (195-269)||(5858307-5858382)
chr8 (184-243)||(31297380-31297439)
chr8 (197-260)||(31598467-31598529)
chr8 (183-249)||(41866148-41866215)
chr8 (184-249)||(79645-79711)
chr8 (185-266)||(9054544-9054629)
chr8 (179-249)||(43239653-43239723)
chr8 (185-250)||(43733153-43733219)
chr8 (197-253)||(11229268-11229325)
chr8 (184-243)||(25033369-25033429)
chr8 (185-265)||(12506229-12506311)
chr8 (183-251)||(13537175-13537243)
chr8 (183-251)||(13626723-13626791)
chr8 (185-268)||(14581781-14581865)
chr8 (182-262)||(16424118-16424198)
chr8 (194-250)||(22330673-22330729)
chr8 (184-256)||(31305807-31305879)
chr8 (187-251)||(37388254-37388318)
chr8 (197-256)||(8950322-8950381)
chr8 (184-243)||(13865124-13865183)
chr8 (195-249)||(8228517-8228571)
chr8 (257-295)||(8948548-8948586)
chr8 (184-249)||(26772674-26772740)
chr8 (185-239)||(33231049-33231103)
chr8 (197-251)||(42651628-42651682)
chr8 (25-70)||(32319-32364)
chr8 (180-268)||(34336005-34336093)
chr8 (194-234)||(4008977-4009017)
chr8 (194-249)||(4873301-4873357)
chr8 (180-260)||(12318971-12319051)
chr8 (198-263)||(35376673-35376741)
chr8 (184-216)||(36837520-36837552)
[»] chr6 (18 HSPs)
chr6 (186-262)||(4464916-4464992)
chr6 (184-251)||(13380521-13380590)
chr6 (184-268)||(32719408-32719493)
chr6 (184-259)||(4089429-4089504)
chr6 (184-249)||(33590360-33590425)
chr6 (184-251)||(26713844-26713912)
chr6 (195-249)||(1567264-1567319)
chr6 (184-226)||(24874967-24875009)
chr6 (195-262)||(25073288-25073357)
chr6 (203-251)||(5613475-5613523)
chr6 (185-225)||(22788551-22788591)
chr6 (179-241)||(5825324-5825386)
chr6 (197-254)||(22817386-22817443)
chr6 (185-249)||(32221986-32222051)
chr6 (184-243)||(23095160-23095220)
chr6 (184-243)||(26574427-26574487)
chr6 (184-236)||(33184194-33184246)
chr6 (185-263)||(33676992-33677072)
[»] chr4 (50 HSPs)
chr4 (195-282)||(55813669-55813760)
chr4 (182-265)||(9119816-9119899)
chr4 (169-249)||(28175481-28175562)
chr4 (195-259)||(47063666-47063730)
chr4 (184-253)||(42650615-42650685)
chr4 (184-258)||(45899370-45899443)
chr4 (179-268)||(52636724-52636813)
chr4 (181-249)||(30198800-30198869)
chr4 (184-249)||(12708866-12708932)
chr4 (184-249)||(29114265-29114331)
chr4 (180-263)||(3075791-3075874)
chr4 (184-257)||(13984996-13985070)
chr4 (184-254)||(21443001-21443071)
chr4 (184-268)||(35959159-35959245)
chr4 (184-249)||(49668136-49668202)
chr4 (198-254)||(30307351-30307408)
chr4 (181-249)||(38136863-38136932)
chr4 (198-262)||(46669991-46670056)
chr4 (184-251)||(46176959-46177027)
chr4 (194-249)||(49936498-49936554)
chr4 (197-249)||(51974311-51974363)
chr4 (185-254)||(4442012-4442082)
chr4 (189-249)||(16318600-16318661)
chr4 (197-265)||(27485287-27485356)
chr4 (205-253)||(29576188-29576236)
chr4 (184-243)||(31530008-31530068)
chr4 (184-243)||(38317261-38317321)
chr4 (184-250)||(13269935-13270002)
chr4 (184-227)||(15498826-15498869)
chr4 (182-260)||(18396181-18396260)
chr4 (184-243)||(38366018-38366077)
chr4 (195-262)||(54723940-54724007)
chr4 (194-259)||(18319714-18319780)
chr4 (194-259)||(18398901-18398967)
chr4 (184-258)||(19154025-19154099)
chr4 (184-249)||(45823538-45823604)
chr4 (184-218)||(48620312-48620346)
chr4 (194-251)||(54205820-54205878)
chr4 (25-70)||(18397076-18397121)
chr4 (195-251)||(21081331-21081388)
chr4 (179-243)||(21296132-21296197)
chr4 (184-287)||(27938817-27938922)
chr4 (25-70)||(28880154-28880199)
chr4 (184-267)||(48417632-48417717)
chr4 (194-254)||(52430597-52430658)
chr4 (184-243)||(7182223-7182283)
chr4 (184-243)||(20533916-20533976)
chr4 (183-251)||(32866762-32866829)
chr4 (25-69)||(42650796-42650840)
chr4 (204-259)||(48620252-48620308)
[»] chr1 (62 HSPs)
chr1 (184-295)||(25561349-25561465)
chr1 (184-259)||(17556640-17556716)
chr1 (184-268)||(41817331-41817416)
chr1 (184-263)||(41432798-41432878)
chr1 (184-259)||(12625856-12625931)
chr1 (184-263)||(34552120-34552198)
chr1 (180-259)||(50097601-50097680)
chr1 (184-249)||(5584488-5584554)
chr1 (184-268)||(29092050-29092135)
chr1 (186-253)||(49102986-49103054)
chr1 (180-282)||(51303204-51303308)
chr1 (184-295)||(2909059-2909167)
chr1 (184-249)||(17760507-17760573)
chr1 (184-257)||(24436964-24437038)
chr1 (184-249)||(34154360-34154426)
chr1 (184-249)||(46001549-46001615)
chr1 (184-249)||(52068169-52068235)
chr1 (180-249)||(32287564-32287633)
chr1 (185-249)||(37649649-37649714)
chr1 (25-70)||(49102848-49102893)
chr1 (184-257)||(50084101-50084173)
chr1 (184-251)||(28848821-28848889)
chr1 (194-249)||(36269726-36269782)
chr1 (25-69)||(50084291-50084335)
chr1 (184-243)||(14153101-14153160)
chr1 (185-248)||(33579219-33579282)
chr1 (184-251)||(42333626-42333693)
chr1 (194-263)||(43036355-43036425)
chr1 (184-243)||(45565119-45565178)
chr1 (184-268)||(7915476-7915562)
chr1 (195-253)||(42806151-42806209)
chr1 (185-250)||(50476520-50476586)
chr1 (200-253)||(52331028-52331082)
chr1 (199-251)||(23412000-23412053)
chr1 (25-70)||(50097777-50097822)
chr1 (199-268)||(51839230-51839299)
chr1 (25-69)||(5883477-5883521)
chr1 (185-249)||(17416750-17416814)
chr1 (185-268)||(36886833-36886917)
chr1 (180-243)||(51246591-51246655)
chr1 (196-243)||(1688261-1688308)
chr1 (191-249)||(9595558-9595617)
chr1 (204-251)||(34749647-34749694)
chr1 (197-263)||(36269469-36269536)
chr1 (183-268)||(50587010-50587094)
chr1 (184-263)||(15426294-15426375)
chr1 (263-301)||(47742445-47742483)
chr1 (25-70)||(25561191-25561236)
chr1 (184-248)||(30543385-30543450)
chr1 (28-65)||(36385506-36385543)
chr1 (195-249)||(39886968-39887024)
chr1 (179-251)||(41428021-41428093)
chr1 (24-69)||(43530170-43530215)
chr1 (185-249)||(50226023-50226088)
chr1 (197-249)||(69717-69769)
chr1 (184-243)||(12293799-12293859)
chr1 (25-69)||(17556956-17557000)
chr1 (183-251)||(18937306-18937374)
chr1 (184-243)||(23871495-23871555)
chr1 (184-243)||(33991530-33991590)
chr1 (196-256)||(45752268-45752327)
chr1 (184-251)||(52073480-52073548)
[»] chr5 (38 HSPs)
chr5 (184-262)||(19389850-19389928)
chr5 (197-265)||(7398825-7398893)
chr5 (184-256)||(39428918-39428990)
chr5 (184-259)||(3938162-3938238)
chr5 (194-269)||(6491147-6491223)
chr5 (195-268)||(3925824-3925897)
chr5 (184-268)||(5772752-5772837)
chr5 (184-263)||(35708785-35708866)
chr5 (169-247)||(6373123-6373201)
chr5 (186-268)||(43496895-43496977)
chr5 (184-268)||(10843008-10843093)
chr5 (25-70)||(12063855-12063900)
chr5 (184-252)||(12150563-12150631)
chr5 (185-253)||(29022598-29022666)
chr5 (194-249)||(35683515-35683571)
chr5 (184-262)||(13569333-13569412)
chr5 (184-255)||(29799624-29799695)
chr5 (184-249)||(10437969-10438035)
chr5 (180-249)||(10955718-10955788)
chr5 (184-249)||(14570072-14570138)
chr5 (186-248)||(18671017-18671079)
chr5 (184-249)||(38568399-38568465)
chr5 (184-249)||(39649554-39649620)
chr5 (181-243)||(41638344-41638406)
chr5 (195-263)||(3081374-3081443)
chr5 (184-249)||(18675745-18675810)
chr5 (179-243)||(41694966-41695031)
chr5 (184-243)||(25026911-25026971)
chr5 (184-259)||(37908974-37909050)
chr5 (184-258)||(12229495-12229570)
chr5 (219-269)||(6491391-6491441)
chr5 (184-249)||(9096302-9096368)
chr5 (184-276)||(29709478-29709572)
chr5 (258-295)||(12064108-12064145)
chr5 (197-262)||(22103487-22103551)
chr5 (188-244)||(13294010-13294066)
chr5 (185-240)||(27480205-27480261)
chr5 (184-243)||(35701049-35701109)
[»] chr3 (60 HSPs)
chr3 (194-262)||(7435657-7435725)
chr3 (169-263)||(35283055-35283151)
chr3 (169-259)||(53888460-53888551)
chr3 (184-254)||(48444485-48444555)
chr3 (184-268)||(33944672-33944757)
chr3 (194-254)||(3458328-3458388)
chr3 (184-263)||(32858799-32858879)
chr3 (184-249)||(38639572-38639638)
chr3 (185-249)||(53664632-53664697)
chr3 (183-255)||(50345678-50345750)
chr3 (185-249)||(51686490-51686554)
chr3 (194-269)||(16883318-16883393)
chr3 (180-251)||(29623218-29623289)
chr3 (185-251)||(45570976-45571043)
chr3 (184-249)||(3537191-3537257)
chr3 (184-249)||(5939813-5939879)
chr3 (184-249)||(25754134-25754200)
chr3 (184-249)||(33908981-33909047)
chr3 (194-258)||(11500078-11500143)
chr3 (186-263)||(32721095-32721172)
chr3 (185-249)||(50948189-50948254)
chr3 (194-249)||(15499341-15499397)
chr3 (183-247)||(35989102-35989166)
chr3 (184-262)||(1132957-1133036)
chr3 (184-243)||(47714705-47714764)
chr3 (184-262)||(49855840-49855919)
chr3 (180-253)||(33281734-33281808)
chr3 (184-250)||(48370212-48370278)
chr3 (180-233)||(52620853-52620907)
chr3 (184-268)||(44400673-44400758)
chr3 (184-249)||(49183679-49183744)
chr3 (202-278)||(3353960-3354036)
chr3 (196-251)||(24588327-24588383)
chr3 (184-247)||(27197237-27197301)
chr3 (194-268)||(40118926-40119002)
chr3 (184-263)||(48908906-48908986)
chr3 (196-243)||(2420660-2420707)
chr3 (184-243)||(17642579-17642638)
chr3 (170-269)||(27921927-27922025)
chr3 (26-68)||(40674272-40674314)
chr3 (194-247)||(44979404-44979458)
chr3 (180-250)||(47434347-47434417)
chr3 (169-257)||(3333839-3333928)
chr3 (25-70)||(36637962-36638007)
chr3 (195-258)||(38401952-38402017)
chr3 (204-249)||(49860563-49860608)
chr3 (25-70)||(50201731-50201776)
chr3 (185-245)||(50535135-50535196)
chr3 (25-66)||(53888653-53888694)
chr3 (184-251)||(517664-517731)
chr3 (25-65)||(3457471-3457511)
chr3 (186-214)||(3990028-3990056)
chr3 (194-253)||(11040870-11040930)
chr3 (184-263)||(21777668-21777748)
chr3 (184-243)||(24242124-24242184)
chr3 (184-243)||(31178278-31178338)
chr3 (194-249)||(37674182-37674238)
chr3 (196-243)||(38526142-38526190)
chr3 (198-269)||(49304191-49304263)
chr3 (211-259)||(54917744-54917792)
[»] scaffold0598 (2 HSPs)
scaffold0598 (184-259)||(9437-9511)
scaffold0598 (206-249)||(9722-9765)
[»] scaffold0248 (1 HSPs)
scaffold0248 (184-263)||(228-308)
[»] scaffold0051 (4 HSPs)
scaffold0051 (184-249)||(6789-6855)
scaffold0051 (184-249)||(7772-7838)
scaffold0051 (184-249)||(723-788)
scaffold0051 (184-249)||(3600-3665)
[»] scaffold0031 (1 HSPs)
scaffold0031 (184-249)||(93538-93604)
[»] scaffold0519 (1 HSPs)
scaffold0519 (197-253)||(7494-7551)
[»] scaffold0274 (1 HSPs)
scaffold0274 (179-251)||(15899-15971)
[»] scaffold0136 (1 HSPs)
scaffold0136 (194-268)||(2065-2140)
[»] scaffold0128 (1 HSPs)
scaffold0128 (184-249)||(26362-26429)
[»] scaffold0036 (1 HSPs)
scaffold0036 (194-259)||(82769-82835)
[»] scaffold0991 (1 HSPs)
scaffold0991 (185-244)||(3237-3297)
[»] scaffold0053 (1 HSPs)
scaffold0053 (194-249)||(29227-29283)
[»] scaffold0028 (1 HSPs)
scaffold0028 (184-243)||(35487-35546)
[»] scaffold0026 (1 HSPs)
scaffold0026 (184-245)||(74722-74784)
[»] scaffold0063 (1 HSPs)
scaffold0063 (184-257)||(56568-56641)


Alignment Details
Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 169 - 308
Target Start/End: Original strand, 4788019 - 4788172
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcc-- 266  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||      
T  4788019 ccctcccaaatccctcaaaaccctactccaatacaattttttagttccccaaataaggatgattttatattatgaagaaaaataagcccccaaagtcctc 4788118  T
Q  267 ------------tctatttcttccacttactcattctttttcttcaaggccttt 308  Q
                ||||||||||||||||||||||||||||||||||||||||||    
T  4788119 cttccaatgtcatctatttcttccacttactcattctttttcttcaaggccttt 4788172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 4787870 - 4787953
Alignment:
Q  20 atacgaatatagggaaaaattgagaaaattttcacattttttgaaagagtaannnnnnnngagagtgataaattaatgcttatg 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  4787870 atacgaatatagggaaaaattgagaaatttttcacattttttgaaagagtaatttttttagagagtgataaattaatgcttatg 4787953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 33187878 - 33187953
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  33187878 caaaactctcctccaatacaattttttagttcctcaaatgaggatgattttatattttgaagaaaaacaagccccc 33187953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 1277976 - 1277911
Alignment:
Q  195 tccaatacaattttttagttccccaaa-tgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  1277976 tccaatacaattttttagttccccaaaatgaggatggttttatattttgaagaaaaataagccccc 1277911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 7391428 - 7391516
Alignment:
Q  170 cctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||||  |||| |||||||||  ||||||||| |||||||||||||||||| |||| | ||||||||| |||||||||||||||||||    
T  7391428 cctcccagatcccccaaaaccctcatccaataca-ttttttagttccccaaataaggagggttttatattttgaagaaaaataagccccc 7391516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 31055423 - 31055359
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaa 248  Q
    ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| | ||||||    
T  31055423 caaaaccctcctccaatacaattttttagttccccaaatgaggagggttttatattttaaagaaa 31055359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 32820263 - 32820330
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||| ||||| ||||| ||||||||||    
T  32820263 caaaacccttctccaatacaactttttagttccccaaacgaggataattttgtattaggaagaaaaat 32820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 45940432 - 45940498
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  45940432 caaaactctactccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 45940498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 42112991 - 42113058
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgatttta-tattatgaagaaaaat 251  Q
    |||||||||| |||||||||| |||||||||||||||||||||| || |||| ||||||||||||||||    
T  42112991 caaaaccctattccaatacaactttttagttccccaaatgagga-gagtttagtattatgaagaaaaat 42113058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 2826274 - 2826345
Alignment:
Q  179 tccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||| | |||  ||||||||||||||    
T  2826274 tcccccaaaaccctcctccaatacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaa 2826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 16805599 - 16805665
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| |||||||| || | |||| ||||||||||||||    
T  16805599 caaaaccctcctccaatacaattttttagttcctccaaatgaagaaggttttgtattatgaagaaaa 16805665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 19791729 - 19791655
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||||||||||||||||||||||||||||  | |||  |||||||||||||| | | || |||||||||||    
T  19791729 ctccaatacaattttttagttccccaaatgaggtgggtttagtattatgaagaaaagttaacctccaaagtcctc 19791655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 31179997 - 31180078
Alignment:
Q  182 ctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataag-cccccaaag 263  Q
    |||||||| || ||||||||||||||||||| ||| ||||||||||   ||||||||| |||||||||||||| |||||||||    
T  31179997 ctcaaaactctcctccaatacaattttttag-tcctcaaatgaggagagttttatattttgaagaaaaataagacccccaaag 31180078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 38505366 - 38505432
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||| | |||| ||||||||||||||    
T  38505366 caaaaccctcctccaatacaattttatagttcccccaaatgaggagggttttgtattatgaagaaaa 38505432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 23552385 - 23552340
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||    
T  23552385 aatatagagaaaaattgagaaatttttcacattttttgaaagagta 23552340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 42622400 - 42622319
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctctatttct 275  Q
    ||||||||||| |||||||||||| ||||||| |||||||| ||| ||||||||| || | ||||||||  |||||| ||||    
T  42622400 ctccaatacaactttttagttccctaaatgagaatgattttgtatgatgaagaaatattaacccccaaaaccctctaattct 42622319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 46442761 - 46442692
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| ||||  ||||| |||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  46442761 ccctcaaaccccttttccaaaacaattttttagctccccaaatgatgaggattttgtattatgaagaaaa 46442692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 33872144 - 33872228
Alignment:
Q  185 aaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||| |||||||||||||| |||||| ||||||||||||| | |||  |||||||||||||| | | ||||||||| ||||    
T  33872144 aaaaccctcctccaatacaatttgttagttcccccaaatgaggagggtttagtattatgaagaaaagttaacccccaaagccctc 33872228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 35264906 - 35264970
Alignment:
Q  186 aaaccctactccaatacaattttttagttccccaaatgagga-tgattttatattatgaagaaaa 249  Q
    ||||||| ||||||||||||||||||||||||||||||| || || |||| |||||| |||||||    
T  35264906 aaaccctcctccaatacaattttttagttccccaaatgaagagtgtttttgtattattaagaaaa 35264970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 15748992 - 15749047
Alignment:
Q  195 tccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  15748992 tccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 15749047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 30301966 - 30302025
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    ||||||||||||||||||||| | ||||||||||   ||||||||| |||||||||||||    
T  30301966 ctccaatacaattttttagtttctcaaatgaggagagttttatattttgaagaaaaataa 30302025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 13697320 - 13697263
Alignment:
Q  195 tccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||||||| ||||||||||||| ||||||||| | |||| ||||||||||||||||    
T  13697320 tccaatacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaat 13697263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 22556577 - 22556622
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||    
T  22556577 aatatagggaaaaattgagaaatctttcacattttttaaaagagta 22556622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 42254007 - 42253942
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaa 248  Q
    ||||||||| || ||||| |||||||||||||| ||||||||||| | |||| |||||||||||||    
T  42254007 caaaaccctccttcaatataattttttagttcctccaaatgaggagggttttgtattatgaagaaa 42253942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 46509312 - 46509252
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccc 258  Q
    ||||||||||||||||||  | ||||||||| | ||||||||||||||||||||||| ||||    
T  46509312 caatacaattttttagttttctaaatgaggagg-ttttatattatgaagaaaaataaacccc 46509252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 9172542 - 9172486
Alignment:
Q  198 aatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataa 253  Q
    |||||||||||  ||||||  ||||||||||||||||| ||||||||||||||||||    
T  9172542 aatacaattttgaagttcctacaaatgaggatgattttgtattatgaagaaaaataa 9172486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 38137986 - 38137922
Alignment:
Q  188 accctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||| ||||||||||| |||| || ||||| ||||||||| |||||| ||||||||||||||||    
T  38137986 accctcctccaatacaaattttgagctcccccaaatgaggaggattttgtattatgaagaaaaat 38137922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 44487359 - 44487415
Alignment:
Q  194 ctccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||| |||||||||    
T  44487359 ctccaatacaattttttagttcctctaaatgaggagaattttatattttgaagaaaa 44487415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 374618 - 374677
Alignment:
Q  203 aattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    |||||||||||||  ||||||||   ||||||||||||||||||||||||| || |||||    
T  374618 aattttttagttcttcaaatgagagagattttatattatgaagaaaaataaacctccaaa 374677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 17818353 - 17818274
Alignment:
Q  186 aaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagt 264  Q
    ||||||| ||||||||||||||||||||||| | |||||| || | |||| |||| ||||||||| | | ||||||||||    
T  17818353 aaaccctcctccaatacaattttttagttcctctaaatgatgagggttttgtattctgaagaaaagttaacccccaaagt 17818274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 21018741 - 21018808
Alignment:
Q  199 atacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaat-aagcccccaaagt 264  Q
    |||||||||||||||||| ||||| ||||| |||| | |||||||||||||||| ||| |||||||||    
T  21018741 atacaattttttagttcctccaaacgaggaggattctgtattatgaagaaaaatgaagtccccaaagt 21018808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 22556733 - 22556812
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||| ||| || ||||||||||||   |||||||||||||| |   ||||||||| |||||||| ||||||||||||||    
T  22556733 caaaatcctccttcaatacaattttaaggttccccaaatgagaagagttttatattttgaagaaatataagcccccaaag 22556812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 38680058 - 38680120
Alignment:
Q  196 ccaatacaattttttagttccccaaatgaggatga-ttttatattatgaagaaaaataagcccc 258  Q
    ||||||||||| ||||||||||||||| |||| || ||||||||| ||||||||||||| ||||    
T  38680058 ccaatacaattatttagttccccaaat-aggaagagttttatattttgaagaaaaataaacccc 38680120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 39856408 - 39856475
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    |||||||||| ||||||||| || |||||||||||||||| |||||| || |||| ||| | ||||||    
T  39856408 tccaatacaactttttagtttccgaaatgaggatgattttgtattattaaaaaaattaacctcccaaa 39856475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 42620380 - 42620443
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| ||| | |||||||||||||| ||||||||||||||||   ||||| ||||||||    
T  42620380 ccctcaaaatcctcccccaatacaatttttgagttccccaaatgaggggaattttttattatga 42620443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 46449223 - 46449164
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| ||||||| ||||||||  |||||| ||||||||    
T  46449223 caaaacccttccccaatacaatttttgagttccctaaatgagggagattttttattatga 46449164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 4058171 - 4058237
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||  |||||||||||||||||||| | ||||| ||||| | |||| ||||||||||||||    
T  4058171 caaaaccctcatccaatacaattttttagttgctccaaacgaggagggttttgtattatgaagaaaa 4058237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 4125985 - 4125932
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||| |||||||||| ||||||||| |||||  ||||||||||||||    
T  4125985 tccaatacaattgtttagttccc-aaatgaggaggatttagtattatgaagaaaa 4125932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 10592002 - 10592048
Alignment:
Q  203 aattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||    
T  10592002 aatttttgagttccccaaatgaggatacttttgtattatgaagaaaa 10592048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 43348261 - 43348327
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||| ||||||||||||||||| |||||||| |||| |||||  ||||||||| ||||    
T  43348261 caaaaccctcctctaatacaattttttagttcccccaaataaggaggatttagtattatgaaaaaaa 43348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 46611873 - 46611927
Alignment:
Q  198 aatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||||||||||||||||| |||||| ||| | ||||||||| |||||||||||    
T  46611873 aatacaattttttagttccctcaaatggggagggttttatattttgaagaaaaat 46611927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 23550839 - 23550758
Alignment:
Q  182 ctcaaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||||| ||| |||||||||||   ||||||||||| ||||||  | | ||||||||||||||||||||| | ||||||||    
T  23550839 ctcaaaatcctcctccaatacaacgctttagttcccccaaatgaaaaaggttttatattatgaagaaaaattaacccccaaa 23550758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 24924626 - 24924679
Alignment:
Q  198 aatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||||||||  |||||| |||||||||| | |||| ||||||||||||||||    
T  24924626 aatacaattttcaagttcctcaaatgaggagggttttgtattatgaagaaaaat 24924679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 31180092 - 31180129
Alignment:
Q  258 ccaaagtcctctatttcttccacttactcattcttttt 295  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  31180092 ccaatgtcctctatttcttccacttactcattcctttt 31180129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 34670244 - 34670179
Alignment:
Q  185 aaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| ||| |||||||||| |||  || |||||||||||| |||||| ||||||||||||||    
T  34670244 aaaaccctcctctaatacaatttcttaagtcacccaaatgaggaggattttgtattatgaagaaaa 34670179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 40985272 - 40985317
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    |||||||| |||||| ||||||  ||||||||||||||||||||||    
T  40985272 aatataggaaaaaatagagaaatatttcacattttttgaaagagta 40985317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 6746611 - 6746687
Alignment:
Q  194 ctccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaagtcctc 268  Q
    |||||||||||||||| |||| |||||||||||||   |||| |||||| |||||||| ||| ||||||||| ||||    
T  6746611 ctccaatacaatttttgagttcccccaaatgaggaaagttttgtattataaagaaaaattaaccccccaaagccctc 6746687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 9153128 - 9153076
Alignment:
Q  202 caattttttagttccc-caaatgaggatgattttatattatgaagaaaaataa 253  Q
    |||||||| ||||||  ||||| ||||||||||| ||||||||||||||||||    
T  9153128 caatttttaagttcctacaaattaggatgattttgtattatgaagaaaaataa 9153076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 17884226 - 17884291
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||| |||| ||||||||||||||||||||||| ||||| || |   |||| ||||||||||||||||    
T  17884226 caaagccctcctccaatacaattttttagttcctcaaataagaa--gttttgtattatgaagaaaaat 17884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 23551696 - 23551640
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaa 250  Q
    |||||||||||  ||||||||||| ||||||||| |  ||| |||||||||||||||    
T  23551696 ctccaatacaaccttttagttcccaaaatgaggagggctttgtattatgaagaaaaa 23551640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 30081412 - 30081352
Alignment:
Q  199 atacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccc 258  Q
    |||||||||||||||||| |||| |||| | | |||| |||| ||||||||||||||||||    
T  30081412 atacaattttttagttcctccaagtgagaagggttttttattttgaagaaaaataagcccc 30081352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 41471480 - 41471412
Alignment:
Q  202 caattttttagttcccc-aaatgaggatgattttatattatgaagaaaaat-aagcccccaaagtcctc 268  Q
    |||||||| |||||||| ||||||||| |||||| |||| | ||||||||| || ||||||||||||||    
T  41471480 caatttttcagttcccccaaatgaggaggattttgtattcttaagaaaaatgaaccccccaaagtcctc 41471412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 301
Target Start/End: Original strand, 11522197 - 11522333
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttata-ttatgaagaaaaataagcc---cccaaagt 264  Q
    |||||||||  ||| ||||||||| ||||||||||| |||||||||||||||||||||| | ||||||| || ||||||||||||||||   ||||| ||    
T  11522197 ccctcccaaaccccccaaaaccctcctccaatacaactttttagttccccaaatgaggagggttttatatttttgaagaaaaataagcccctcccaatgt 11522296  T
Q  265 cctctatttcttccacttactcattctttttcttcaa 301  Q
    ||||||||||||||| |||||| ||| |||| |||||    
T  11522297 cctctatttcttccatttactccttcctttttttcaa 11522333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 39819936 - 39819867
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| | |||||||||    
T  39819936 ctccaatacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaatgaacccccaaag 39819867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 31584798 - 31584881
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccc-caaagtcc 266  Q
    ||||| ||| || ||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||||    
T  31584798 caaaatcctccttcaatataattttttagttccccaaatgaggagggttttatattttgaagaaaaataagcccctcaaagtcc 31584881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 9087484 - 9087576
Alignment:
Q  171 ctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||||  ||| ||||| ||| |||| ||||||||||| ||||||||||||||||| | ||||||||| ||||||||| |||| ||||||||    
T  9087484 ctcccaaaccccccaaaatcctcctccgatacaatttttcagttccccaaatgaggagggttttatattttgaagaaaattaagtccccaaag 9087576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 14167001 - 14166934
Alignment:
Q  198 aatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtc 265  Q
    ||||||||||||||||| |  |||||| |||||||||||||||||||||||||||| ||| |||||||    
T  14167001 aatacaattttttagtttcttaaatgatgatgattttatattatgaagaaaaataatcccgcaaagtc 14166934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 1364882 - 1364816
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  1364882 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 1364816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 11515093 - 11515027
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  11515093 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 11515027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 15803237 - 15803163
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaa-tgaggatgattttatattatgaagaaaaataagccc 257  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||| | ||||||||| |||||||||||||||||    
T  15803237 caaaatcctcctccaatacaattttttagttcccccaactgaggagggttttatattttgaagaaaaataagccc 15803163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 21626172 - 21626106
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||    
T  21626172 caaaacccttctccaatacaactttttagttcccccaaatgaggatggttttgtattatgaagaaaa 21626106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 30072095 - 30072164
Alignment:
Q  185 aaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaaataag 254  Q
    |||||||| |||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||    
T  30072095 aaaaccctcctccaatacaattttt-agttctcccaaatgaggaggattttatattttgaagaaaaataag 30072164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 44656782 - 44656888
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctctatttcttccactta 283  Q
    ||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||     | ||||| ||||||||||| ||||||| |    
T  44656782 caaaaccctccaccaatacagttttt-agttccccaaatgaggatgattttatattttgaagaaaat----ctcccaatgtcctctattttttccactaa 44656876  T
Q  284 ctcattcttttt 295  Q
    ||| ||| ||||    
T  44656877 ctccttcctttt 44656888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 15555378 - 15555463
Alignment:
Q  185 aaaaccct-actccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||| |||||||||||||||||||||||| ||||||||| | | |||| |||||||||||||||| | ||||||||| ||||    
T  15555378 aaaaccctcactccaatacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaaattaacccccaaagccctc 15555463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 30523295 - 30523230
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||| ||| ||||||||||||||||||||||||||||| || | |||||| ||||||||||||||    
T  30523295 caaaatcctcctccaatacaattttttagttccccaaattagaaggattttgtattatgaagaaaa 30523230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 34757654 - 34757589
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaa 248  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||    
T  34757654 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaa 34757589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 37194315 - 37194250
Alignment:
Q  185 aaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  37194315 aaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 37194250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 43572576 - 43572661
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||| || ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  43572576 caaaactctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 43572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 5322151 - 5322231
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||||||  ||||||||| ||||| |||||||| ||||||||| |||||| |||||||||||||||| | |||||||||    
T  5322151 caaaacccttttccaatacagtttttgagttcccccaaatgaggaggattttgtattatgaagaaaaatgaacccccaaag 5322231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 12941830 - 12941906
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||| || |||||||| |||||| ||||||||| ||||||| | ||||||||||| |||||||||||||||||||    
T  12941830 caaaactctcctccaatataattttctagttcccccaaatgagaaggattttatattttgaagaaaaataagccccc 12941906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 36870310 - 36870242
Alignment:
Q  186 aaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| | |||| |||| |||||||||||||    
T  36870310 aaaccctcctccaatacaattttttagttcccccaaatgaggagggttttctattttgaagaaaaataa 36870242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 3737272 - 3737335
Alignment:
Q  198 aatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaa 261  Q
    |||||||||||| |||||  ||||||||||||||||| |||||||||||||||| | |||||||    
T  3737272 aatacaatttttgagttcttcaaatgaggatgattttgtattatgaagaaaaattaacccccaa 3737335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 41100137 - 41100196
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| | |||| ||||||||    
T  41100137 caaaatcctcctccaatacaattttttagttccccaaatgaggagggttttgtattatga 41100196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 26905853 - 26905787
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||| ||||||||||    
T  26905853 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaa 26905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 35550175 - 35550253
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaa 247  Q
    |||||| || |||| |||||| |||||||| ||||| |||||||||||||||||||||| | |||  ||||||||||||    
T  35550175 ccctccaaaatcccacaaaactctactccagtacaactttttagttccccaaatgaggagggtttagtattatgaagaa 35550253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 37664617 - 37664547
Alignment:
Q  194 ctccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||||||||||||| |||||| |||||| |||  ||||||||||||||||||||||||| || ||||||    
T  37664617 ctccaatacaatttttaagttcctccaaataagggagattttatattatgaagaaaaataaaccaccaaag 37664547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 40212052 - 40211986
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||  |||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  40212052 caaaaccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 40211986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 11522055 - 11522100
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  11522055 aatatagggaaaaattgagaaatctttcacattttttgaaagagta 11522100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 27987716 - 27987634
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgaggatga----ttttatattatgaagaaaaataagcccccaaag 263  Q
    |||||||| || |||||||||||||||||||| |||| ||||  ||    ||||||||| |||||||||||||||||||||||    
T  27987716 aaaacccttctacaatacaattttttagttcctcaaacgagggagaagagttttatattttgaagaaaaataagcccccaaag 27987634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 28074249 - 28074167
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgaggatga----ttttatattatgaagaaaaataagcccccaaag 263  Q
    |||||||| || |||||||||||||||||||| |||| ||||  ||    ||||||||| |||||||||||||||||||||||    
T  28074249 aaaacccttctacaatacaattttttagttcctcaaacgagggagaagagttttatattttgaagaaaaataagcccccaaag 28074167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 4003475 - 4003391
Alignment:
Q  186 aaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaagtcctc 268  Q
    ||||||| |||||||||||||||| |||| |||||||||||||   |||| ||||||||||||||| ||| ||||||||| ||||    
T  4003475 aaaccctcctccaatacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaattaaccccccaaagccctc 4003391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 16519125 - 16519189
Alignment:
Q  188 accctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||| ||| ||||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  16519125 accctcctctaatacaactttttagtttccccaaatgaggaggattttgtattatgaagaaaaat 16519189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 21834990 - 21834922
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||| ||| ||||||| ||||||||||||| |||||||||   |||||||||||||||||||||    
T  21834990 caaaaccctcctctaatacaactttttagttcccctaaatgaggagagttttatattatgaagaaaaat 21834922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 32243524 - 32243464
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  32243524 caaaaccctcccccaatacaatttttgagttcccccaaatgaggatgattttttattatga 32243464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 44954039 - 44954098
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    ||||||||||||||||||||||   ||||||||| | ||||||||| |||||||||||||    
T  44954039 ctccaatacaattttttagttcttaaaatgaggagggttttatattttgaagaaaaataa 44954098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 13018510 - 13018576
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| | |||||||| |||||||||||| ||||||||||| | |||| ||||||||||||||    
T  13018510 caaaaccctcccccaatacatttttttagttcctccaaatgaggagggttttgtattatgaagaaaa 13018576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 15803380 - 15803303
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagtaannnnnnnngagagtgataaattaatgcttatg 103  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||| |        ||||||||||||||||||||||||    
T  15803380 aatataggggaaaattgagaaatctttcacattttttgaaagagt-atttttttagagagtgataaattaatgcttatg 15803303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 38293936 - 38293878
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    |||||||| | |||||||||||||| ||||||||||||||||  |||||| ||||||||    
T  38293936 aaaaccctcccccaatacaatttttgagttccccaaatgagggagattttttattatga 38293878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 5003183 - 5003240
Alignment:
Q  208 tttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtc 265  Q
    ||||||| | |||||||||||||||||||||||| ||||||||| | ||| |||||||    
T  5003183 tttagtttctcaaatgaggatgattttatattataaagaaaaatgaaccctcaaagtc 5003240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 6656169 - 6656101
Alignment:
Q  184 caaaaccctactccaatacaattt--tttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||  ||||||||| ||||||||||| | |||| ||||||||||||||    
T  6656169 caaaaccctcctccaatacaatttgttttagttcctccaaatgaggagggttttgtattatgaagaaaa 6656101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 3254682 - 3254630
Alignment:
Q  186 aaaccctactccaatacaattttttagttccccaaatgaggatgattttatat 238  Q
    |||||||  |||||| |||||||||||||||||||||||||| | ||||||||    
T  3254682 aaaccctcatccaatgcaattttttagttccccaaatgaggagggttttatat 3254630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 30312437 - 30312497
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| || |||||||||||||||||| ||||||||||||  |||||| ||||||||    
T  30312437 caaaaccctccttcaatacaattttttagttcccccaaatgagggggattttttattatga 30312497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 36030852 - 36030776
Alignment:
Q  194 ctccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctct 269  Q
    ||||| |||||||||| |||||||| |||||||||  ||||| |||| ||||||||||| | ||||||||| |||||    
T  36030852 ctccattacaatttttgagttcccccaaatgaggagaattttgtattctgaagaaaaatgaacccccaaagccctct 36030776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 13765971 - 13766030
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| ||||||||||||||||   ||||| ||||||||    
T  13765971 caaaaccctcccccaatacaatttttgagttccccaaatgaggggaattttttattatga 13766030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 19382926 - 19382867
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | ||||||| |||||| ||||||||||||||||  |||||| ||||||||    
T  19382926 caaaaccctcccccaatacgatttttgagttccccaaatgagggggattttttattatga 19382867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 39181037 - 39180999
Alignment:
Q  257 cccaaagtcctctatttcttccacttactcattcttttt 295  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  39181037 cccaaagtcctctatttcttccacttactccttcctttt 39180999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 42644696 - 42644626
Alignment:
Q  194 ctccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||||||||||||||||||| |||||||| |||  || ||| |||||||||||||| ||| || ||||||    
T  42644696 ctccaatacaattttttagttcccccaaattagggggaatttgtattatgaagaaaactaaacctccaaag 42644626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 8555808 - 8555865
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatatta 240  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||  |||||| |||||    
T  8555808 caaaaccctcccccaatacaattttttagttcccccaaatgagggggattttttatta 8555865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 26599281 - 26599362
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaat-aagcccccaaag 263  Q
    ||||||||| |||||||||||||| | |||| ||||||||||||| |   || |||||||||||||||| || |||||||||    
T  26599281 caaaaccctcctccaatacaatttgtgagttcccccaaatgaggagggaattgtattatgaagaaaaatgaaccccccaaag 26599362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 31082864 - 31082779
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||||| |||||||||||| |||||||| ||||||| ||||| | |||  ||||| |||||||| | | ||||||||| ||||    
T  31082864 caaaaccctcctccaatacaatattttagttcccccaaacgaggagggtttagtattacgaagaaaagttaacccccaaagccctc 31082779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 36870445 - 36870404
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaag 66  Q
    ||||||||| |||||||||||| |||||||| ||||||||||    
T  36870445 aatataggggaaaattgagaaatttttcacaatttttgaaag 36870404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 39750184 - 39750115
Alignment:
Q  200 tacaattttttagttccccaaatgaggatgattttatatta-tgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||||||||||||||||||||||| | |||| | ||| ||||||||| | | ||||||||| ||||    
T  39750184 tacaattttttagttccccaaatgaggagggttttgtgttattgaagaaaagttaacccccaaagccctc 39750115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 39913304 - 39913228
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgat-tttatattatgaagaaaaataagccccca 260  Q
    ||||| ||| |||||||| ||||||| ||||||||||||||||| ||| ||||||| | |||||||||| | ||||||    
T  39913304 caaaatcctcctccaatataatttttgagttccccaaatgagga-gatatttatatcaggaagaaaaatgaaccccca 39913228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 18018625 - 18018688
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  18018625 ccctcaaaaccctcc-ccaatacaatttttgagttcccccaaatgagggagattttttattatga 18018688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 25960638 - 25960702
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||||||| | || ||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  25960638 ccctcaaaaccctcccccgatacaatttttgagttcccccaaatgagggagattttctattatga 25960702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 28539469 - 28539501
Alignment:
Q  195 tccaatacaattttttagttccccaaatgagga 227  Q
    ||||||||||||||||||| |||||||||||||    
T  28539469 tccaatacaattttttagtcccccaaatgagga 28539501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 39181102 - 39181054
Alignment:
Q  208 tttagttccccaaatgaggatgattttatattatgaagaaaaataagcc 256  Q
    ||||||||| ||||||||||   ||||||||| ||||||||||||||||    
T  39181102 tttagttcctcaaatgaggagagttttatattttgaagaaaaataagcc 39181054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 39671094 - 39671149
Alignment:
Q  198 aatacaattttttagttcccc--aaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||||||||| |||||  ||||||| || ||||| ||||||||||||||||    
T  39671094 aatacaattttttagctccccccaaatgagaattattttgtattatgaagaaaaat 39671149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 41455301 - 41455223
Alignment:
Q  188 accctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcc 266  Q
    ||||| ||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  41455301 accctcctccaatacaattttttagtttcccaaatgaggagggttttatattttgaagaaaaataagcccccaaagtcc 41455223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 28416193 - 28416276
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcct 267  Q
    |||||||||  |||||||||||||| ||||||||||||| |||| | ||||||||| ||||||||||||| |||||||||||||    
T  28416193 caaaaccctcatccaatacaattttgtagttccccaaataaggagggttttatattttgaagaaaaataaccccccaaagtcct 28416276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 31149946 - 31149849
Alignment:
Q  199 atacaattttttagttccccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaagt-----cctctatttcttccacttactcattc 290  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||||     |||||||||||||||||| |||||||    
T  31149946 atacaactttttagttccccaaatgaggatgattttgtattaggaagaaaaattaaccccccaaagtctacccctctatttcttccacttgctcattc 31149849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 1839852 - 1839926
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagccc 257  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||| | ||||||||| |||||||||||||||||    
T  1839852 caaaaccctcctccaatacaatttttaagttcccccaaatgaggagggttttatattttgaagaaaaataagccc 1839926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 44879610 - 44879517
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    |||||| || |||||||||||| | |||||||||||||||||||||||| |||||||||  |||||  || |||||||||||||  ||||||||    
T  44879610 ccctccaaaatccctcaaaaccttcctccaatacaattttttagttccctaaatgaggagaattttgaatcatgaagaaaaatacacccccaaa 44879517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 44880311 - 44880404
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    |||||| || |||||||||||| | |||||||||||||||||||||||| |||||||||  |||||  || |||||||||||||  ||||||||    
T  44880311 ccctccaaaatccctcaaaaccttcctccaatacaattttttagttccctaaatgaggagaattttgaatcatgaagaaaaatacacccccaaa 44880404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 13406465 - 13406401
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||| |||||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||    
T  13406465 tccaattcaattttttagttccccaaatgaggattgttttatattttgaagaaatataagccccc 13406401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 40985102 - 40985174
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||| ||||||||| ||||||    
T  40985102 ccctcaaaaccctcctccaatacaatttttgagttcccccaaatgaggaggattttgtattatgaataaaaat 40985174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 27085412 - 27085322
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||||||  |||| |||||| | |||||||||||||||||||||||||||||||| |   ||||||||| | |||||||||||| ||||    
T  27085412 ccctcccaaaccccttaaaaccatcctccaatacaattttttagttccccaaatgagaagagttttatattttaaagaaaaataagtcccc 27085322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 5911471 - 5911532
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccc 258  Q
    ||||||||||||||||||||||||||||||| | ||||||||| | ||||||||||| ||||    
T  5911471 caatacaattttttagttccccaaatgaggagggttttatattttaaagaaaaataaacccc 5911532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 8948664 - 8948595
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||||||||||||||||||||| |||||| || | ||||| ||| ||||||||||||||||| |||||    
T  8948664 ctccaatacaattttttagttcccaaaatgacgagggttttacattttgaagaaaaataagcccacaaag 8948595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 21173890 - 21173975
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  21173890 caaaaccctcctccaatataattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 21173975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 23932590 - 23932675
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  23932590 caaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 23932675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 39193979 - 39193894
Alignment:
Q  185 aaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaagtcctc 268  Q
    |||||||| ||||||||||| ||||||||| |||||||||| || | |||||||||||||||||||| ||| ||||||||| ||||    
T  39193979 aaaaccctcctccaatacaactttttagttcccccaaatgaagagggttttatattatgaagaaaaattaaccccccaaagccctc 39193894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 10589866 - 10589778
Alignment:
Q  171 ctcccaagtccctcaaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccc 258  Q
    |||||||  ||| ||||| ||| ||||||||||||||||||||||  | ||||||| ||||||||||||| ||||||||||||| ||||    
T  10589866 ctcccaaaccccccaaaatcctcctccaatacaattttttagttcttctaaatgagaatgattttatattttgaagaaaaataaacccc 10589778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 5858307 - 5858382
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaata-agcccccaaagtcctct 269  Q
    |||||||||||||||||||| ||||||||| || | ||||||||| |||||||||||| | ||||||||| |||||    
T  5858307 tccaatacaattttttagtttcccaaatgatgagggttttatattttgaagaaaaatataccccccaaagccctct 5858382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 31297380 - 31297439
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |  |||| ||||||||    
T  31297380 caaaaccctcctccaatacaattttttagttccccaaatgaggttttttttttattatga 31297439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 31598467 - 31598529
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccca 260  Q
    |||||||||||||| |||| | ||||||||| ||||||||||| ||||||||||||||||||||    
T  31598467 caatacaatttttt-gttctcaaaatgaggaggattttatattttgaagaaaaataagccccca 31598529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 41866148 - 41866215
Alignment:
Q  183 tcaaaaccctactccaatacaattttttag-ttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||| | ||| |||||||||||||||    
T  41866148 tcaaaaccctcctccaatacaattttttagtttccccaaataaggagggtttaatattatgaagaaaa 41866215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 79645 - 79711
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| | |||  ||||||||||||||    
T  79645 caaaaccctcctccaatacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaa 79711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 9054544 - 9054629
Alignment:
Q  185 aaaaccctactccaatacaatttttt--agttccc-caaatgaggatgattttatattatgaagaaaaataagccc-ccaaagtcc 266  Q
    |||||||| |||||||||||||||||  |||| || |||||||||| |||||| |||| ||||||||||||||||| |||||||||    
T  9054544 aaaaccctcctccaatacaattttttttagtttcctcaaatgaggaggattttgtattttgaagaaaaataagccctccaaagtcc 9054629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 43239723 - 43239653
Alignment:
Q  179 tccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||| |||  ||||||||||||||||| ||||||||||||||| | |||| | ||||||||||||    
T  43239723 tccctcaaaaacctcatccaatacaattttttaattccccaaatgaggaggcttttgtgttatgaagaaaa 43239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 43733153 - 43733219
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaa 250  Q
    |||||||| |||||||||||||||||| ||||| |||||||||| |||||| ||||||||| |||||    
T  43733153 aaaaccctcctccaatacaattttttaattccctcaaatgaggaggattttgtattatgaataaaaa 43733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 11229268 - 11229325
Alignment:
Q  197 caatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    |||||||||||||||||||| |||||||| || |||||| ||||||||||||||||||    
T  11229268 caatacaattttttagttcctccaaatgacgaagattttgtattatgaagaaaaataa 11229325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 25033429 - 25033369
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  25033429 caaaaccctcccccaatacaatttttgagttcccccaaatgaggatgattttttattatga 25033369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 12506229 - 12506311
Alignment:
Q  185 aaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa-ataagcccccaaagtc 265  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||| | ||| ||||| |||||||||  ||| |||||||||||    
T  12506229 aaaatccttctccaatacaattttttagttcccccaaatgaggagggtttaatattttgaagaaaagttaaccccccaaagtc 12506311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 13537243 - 13537175
Alignment:
Q  183 tcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||| || |||||||| ||||||| |||| | ||||| |||| || ||||||||||||||||||||    
T  13537243 tcaaaactcttctccaatataatttttgagtttctcaaataaggacgaatttatattatgaagaaaaat 13537175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 13626791 - 13626723
Alignment:
Q  183 tcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||| || |||||||| ||||||| |||| | ||||| |||| || ||||||||||||||||||||    
T  13626791 tcaaaactcttctccaatataatttttgagtttctcaaataaggacgaatttatattatgaagaaaaat 13626723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 14581781 - 14581865
Alignment:
Q  185 aaaaccctactccaatacaatttttt-agttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||||||||||||||| |||||| | | ||||||||||||| | |||  |||||||||||||| ||| ||| ||||| ||||    
T  14581781 aaaaccctactccaatacagttttttaactcccccaaatgaggagggtttattattatgaagaaaagtaaaccctcaaagccctc 14581865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 16424198 - 16424118
Alignment:
Q  182 ctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||||| ||| ||| ||||||||||||||||||| | |||||  ||| |||  |||| ||||||||||||||||| ||||    
T  16424198 ctcaaaatcctcctctaatacaattttttagttcctcgaatgataatggtttcttattttgaagaaaaataagccctcaaa 16424118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 22330729 - 22330673
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaa 250  Q
    |||||||||||||||||||||||  ||| |||||  ||||| |||||||||||||||    
T  22330729 ctccaatacaattttttagttcctaaaaagaggagaattttgtattatgaagaaaaa 22330673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 31305807 - 31305879
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcc 256  Q
    ||||| ||| ||||||||||||| ||| ||||||||||| | || | ||||| ||| ||||||||||||||||    
T  31305807 caaaatccttctccaatacaattgtttcgttccccaaattaagagggttttacattttgaagaaaaataagcc 31305879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 37388318 - 37388254
Alignment:
Q  187 aaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||| |||||||||||||||||| ||| ||||||||||  | |||||| |||||| |||||||||    
T  37388318 aaccatactccaatacaatttttgagtcccccaaatgaaaaagattttttattataaagaaaaat 37388254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 8950381 - 8950322
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcc 256  Q
    ||||||||||||||||||  |||||| | || |||||| |||||||||||||| ||||||    
T  8950381 caatacaattttttagttttccaaattacgaggattttgtattatgaagaaaactaagcc 8950322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 13865124 - 13865183
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||||||||||| |||  |||||| ||||||||    
T  13865124 caaaaccctcccccaatacaatttttgagttccccaaataagggggattttttattatga 13865183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 8228571 - 8228517
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| ||||||||||||||||||||| || | |||| ||||||||| ||||    
T  8228571 tccaatacgattttttagttccccaaatgatgagggttttgtattatgaaaaaaa 8228517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 8948586 - 8948548
Alignment:
Q  257 cccaaagtcctctatttcttccacttactcattcttttt 295  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  8948586 cccaaagtcctctatttcttccacttaatcattcctttt 8948548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 26772674 - 26772740
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||  ||||||||||||||||||||||  ||||||| || | |||| ||||||||||||||    
T  26772674 caaaaccctcatccaatacaattttttagttccttcaaatgatgagggttttgtattatgaagaaaa 26772740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 33231049 - 33231103
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgaggatgattttatatt 239  Q
    |||||||| |||||||||||||||| |||| ||||||| |||| |||||| ||||    
T  33231049 aaaaccctcctccaatacaatttttaagtttcccaaataaggaagattttttatt 33231103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 42651682 - 42651628
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||||| |||||| ||||| |||||||||  ||||| ||||||||||||||||    
T  42651682 caatacaactttttaattcccaaaatgaggaaaattttgtattatgaagaaaaat 42651628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 32364 - 32319
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||| ||||||||| ||||||  ||||||||||||||||||||||    
T  32364 aatatggggaaaaatagagaaatctttcacattttttgaaagagta 32319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 34336093 - 34336005
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||||| || ||||||| |||||||||||||||| |||||||||| | |||  ||| |||||||||| | | ||||||||| ||||    
T  34336093 ccctcaaaacactcctccaatgcaattttttagttccctcaaatgagga-ggtttagtatcatgaagaaaagttaacccccaaagccctc 34336005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 4009017 - 4008977
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgatttt 234  Q
    |||||| ||||||||| ||||||||||||||||| ||||||    
T  4009017 ctccaacacaatttttaagttccccaaatgaggaagatttt 4008977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 4873301 - 4873357
Alignment:
Q  194 ctccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||| ||||| |||||||||| |||||||||| | ||| |||||||||||||||    
T  4873301 ctccaatgcaattgtttagttccctcaaatgaggagggtttcatattatgaagaaaa 4873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 12318971 - 12319051
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccca 260  Q
    ||||||||| ||| |||||||||||  ||||||||| |||| |||||| | |||  ||||||||||||  |||| ||||||    
T  12318971 ccctcaaaatccttctccaatacaaaattttagttctccaagtgaggagggtttattattatgaagaatcataaaccccca 12319051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 35376673 - 35376741
Alignment:
Q  198 aatacaatttttt-agttcccc-aaatgaggatgattttatattatgaagaaaaat-aagcccccaaag 263  Q
    ||||||||||||| |||||||| ||||||||| |||||| ||| |||||||||||| || |||||||||    
T  35376673 aatacaattttttcagttcccccaaatgaggaagattttgtatcatgaagaaaaatgaaccccccaaag 35376741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 36837520 - 36837552
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc 216  Q
    ||||||||| |||||||||||||||||||||||    
T  36837520 caaaaccctcctccaatacaattttttagttcc 36837552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 4464992 - 4464916
Alignment:
Q  186 aaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||||| |||||||||||||||||||||||||||||||||| | || |||||| ||||||||||||||||||||||    
T  4464992 aaaccctcctccaatacaattttttagttccccaaatgaggaaggttgtatattttgaagaaaaataagcccccaaa 4464916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 13380590 - 13380521
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc--aaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||||||  ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  13380590 caaaaccctcttccaatacaatttttgagttccccccaaatgaggatgattttatattatgaagaaaaat 13380521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 32719408 - 32719493
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  32719408 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 32719493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 4089429 - 4089504
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||| ||| |||||||||||||| |||||||| ||||||||||   ||||||||| |||||||||||||||||||    
T  4089429 caaaatccttctccaatacaatttcttagttcctcaaatgaggagagttttatattttgaagaaaaataagccccc 4089504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 33590360 - 33590425
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||  |||||||||||||||||| |||||||||||||| | |||| ||||||||||||||    
T  33590360 caaaaccctcatccaatacaattttttagctccccaaatgaggagggttttgtattatgaagaaaa 33590425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 26713912 - 26713844
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgatttt-atattatgaagaaaaat 251  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| ||||||  ||| ||||||||||||    
T  26713912 caaaaccctcctccaatacaatttttgagttccccaaatgaggaggattttcttatcatgaagaaaaat 26713844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 1567319 - 1567264
Alignment:
Q  195 tccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  1567319 tccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 1567264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 24874967 - 24875009
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgagg 226  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  24874967 caaaaccctcctccaatacaatgttttagttccccaaatgagg 24875009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 25073288 - 25073357
Alignment:
Q  195 tccaatacaattttt-tagttccccaaa-tgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    |||| |||||||||| |||||||||||| |||||| | ||||||||| ||||||||||||| ||||||||    
T  25073288 tccattacaatttttgtagttccccaaaatgaggagggttttatattttgaagaaaaataaacccccaaa 25073357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 5613523 - 5613475
Alignment:
Q  203 aattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||||| |||||||||||||||| | ||||||||| |||||||||||    
T  5613523 aatttttttgttccccaaatgaggagggttttatattttgaagaaaaat 5613475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 22788551 - 22788591
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgag 225  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  22788551 aaaaccctcctccaatacaattttttagttcctcaaatgag 22788591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 5825386 - 5825324
Alignment:
Q  179 tccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattat 241  Q
    |||| ||||||||| | ||||||||| |||| ||||||||||||||||  |||||| ||||||    
T  5825386 tcccccaaaaccctcccccaatacaaattttgagttccccaaatgagggggattttttattat 5825324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 22817386 - 22817443
Alignment:
Q  197 caatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataag 254  Q
    |||||||| ||||||||||||| |||| |||| ||||||||||| ||||||||||||||    
T  22817386 caatacaa-tttttagttccccaaaataaggaggattttatattttgaagaaaaataag 22817443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 32222051 - 32221986
Alignment:
Q  185 aaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||| || ||||||||||||||||||||||| |||||||||||   ||| ||||||| |||||||    
T  32222051 aaaactctcctccaatacaattttttagttcctccaaatgaggagagtttgatattataaagaaaa 32221986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 23095160 - 23095220
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | || |||||||||||||||| ||||||||||||  |||||| ||||||||    
T  23095160 caaaaccctccccccatacaattttttagttcccccaaatgagggggattttttattatga 23095220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 26574427 - 26574487
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  26574427 caaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatga 26574487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 33184246 - 33184194
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttat 236  Q
    |||||||||  || ||||||||||||||||||| |||||||||| | ||||||    
T  33184246 caaaaccctcttctaatacaattttttagttcctcaaatgaggagggttttat 33184194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 33677072 - 33676992
Alignment:
Q  185 aaaaccctactccaatacaattt-tttagttccccaaa-tgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||||||| |||||| ||| || |||||||||| ||| ||||||   ||||||||| ||||||||||||||||| |||||    
T  33677072 aaaaccctagtccaattcaacttgtttagttccctaaaatgaggagagttttatattttgaagaaaaataagcccacaaag 33676992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 55813669 - 55813760
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtc----ctctatttcttccactt 282  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| || ||    |||||||||||||||||    
T  55813669 tccaatacaattttttagtttcccaaatgaggaagattttatattttgaagaaaaataagccccctaaatcccctctctatttcttccactt 55813760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 9119816 - 9119899
Alignment:
Q  182 ctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtc 265  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||   ||||||||| ||||||||||||||||| |||||||    
T  9119816 ctcaaaaccctcctccaatacaatattttagtttcccaaatgaggagagttttatattttgaagaaaaataagccctcaaagtc 9119899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 28175481 - 28175562
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||| || |||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  28175481 ccctccaaaatccctcaaaaccctcctcctatacaattttttagttcctccaaatgaggaggattttgtattatgaagaaaa 28175562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 47063730 - 47063666
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||||||    
T  47063730 tccaatacaattttttagttccccaaatgaggagggttttatattttaaagaaaaataagccccc 47063666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 42650685 - 42650615
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||    
T  42650685 caaaaccctcctccaatacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataa 42650615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 45899443 - 45899370
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccc 258  Q
    ||||||||| ||||||||||||||||||||||||||||| |||  |||||| |||||||||||||| ||||||||    
T  45899443 caaaaccctcctccaatacaattttttagttccccaaattagg-ggattttgtattatgaagaaaactaagcccc 45899370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 52636813 - 52636724
Alignment:
Q  179 tccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaagtcctc 268  Q
    ||||||||||||||||| |||||||| |||| ||||| ||||||||||| | |||||||||||||||||||| ||| ||||||||| ||||    
T  52636813 tccctcaaaaccctacttcaatacaagtttt-agttctccaaatgaggagggttttatattatgaagaaaaattaaccccccaaagccctc 52636724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 30198800 - 30198869
Alignment:
Q  181 cctcaaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  30198800 cctcaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 30198869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 12708866 - 12708932
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  12708866 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 12708932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 29114265 - 29114331
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  29114265 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 29114331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 3075791 - 3075874
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||||||||||| ||||||||  ||||||||||| | ||||||| || | ||||||||  |||||||||||||| ||||||||    
T  3075791 ccctcaaaaccctcctccaatattattttttagtttcgcaaatgaagagggttttatatcttgaagaaaaataagtccccaaag 3075874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 13984996 - 13985070
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagccc 257  Q
    ||||||||| ||||||||||||||||||||||| | |||||| || | ||||||||| | |||||||||||||||    
T  13984996 caaaaccctcctccaatacaattttttagttccactaaatgaagagggttttatattttaaagaaaaataagccc 13985070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 21443071 - 21443001
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataag 254  Q
    |||||| || ||| |||| |||||||||||||| |||||||||| | ||||||||| ||||||||||||||    
T  21443071 caaaactcttctctaatataattttttagttcctcaaatgaggagggttttatattttgaagaaaaataag 21443001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 35959245 - 35959159
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaa-taagcccccaaagtcctc 268  Q
    |||||| || ||||||||||| ||||||||||||| ||||||||| | |||| ||||||||||||||| ||| ||||||||| ||||    
T  35959245 caaaacgctcctccaatacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaaacccccaaagccctc 35959159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 49668136 - 49668202
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||| | ||| |||||||||||||||    
T  49668136 caaaaccctcctccaatacaattttttagttcccttaaatgaggagggtttaatattatgaagaaaa 49668202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 30307408 - 30307351
Alignment:
Q  198 aatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataag 254  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||    
T  30307408 aatacaattttttagttcccccaaatgaggaggattttatattttgaagaaaagtaag 30307351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 38136863 - 38136932
Alignment:
Q  181 cctcaaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| | | |||| ||||||||| ||||    
T  38136863 cctcaaaaccctcctccaatacaattttttagttcctccaaatgagaagggttttgtattatgaaaaaaa 38136932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 46669991 - 46670056
Alignment:
Q  198 aatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    |||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||| ||| ||||    
T  46669991 aatacaattttttagttccctcaaatgaggagggttttatattttgaagaaaaataacccctcaaa 46670056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 46176959 - 46177027
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||| | |||| |||||| |||||||||    
T  46176959 caaaaccctcctccaatacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaat 46177027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 49936554 - 49936498
Alignment:
Q  194 ctccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||    
T  49936554 ctccaatacaattttttagttcccccaaattaggaggattttgtattatgaagaaaa 49936498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 51974363 - 51974311
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||| |||||||||||||||| || |||||| ||||||||||||||    
T  51974363 caatacaatttgttagttccccaaatgaagaggattttgtattatgaagaaaa 51974311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 4442012 - 4442082
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataag 254  Q
    ||||||||  |||||||||||||| ||| |||| |||||||||| | ||||||||| ||||||||||||||    
T  4442012 aaaaccctcttccaatacaattttgtagctccctcaaatgaggagggttttatattttgaagaaaaataag 4442082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 16318661 - 16318600
Alignment:
Q  189 ccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||| ||||||||||||||||||||||| ||||||||||| | |||| || |||||||||||    
T  16318661 ccctcctccaatacaattttttagttcctccaaatgaggagggttttgtaatatgaagaaaa 16318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 27485287 - 27485356
Alignment:
Q  197 caatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataagcccccaaagtc 265  Q
    ||||||| ||||  ||||||| |||||||||| |||||| |||||||||||||||| | |||||||||||    
T  27485287 caatacatttttcgagttccctcaaatgaggaggattttgtattatgaagaaaaatgaacccccaaagtc 27485356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 29576188 - 29576236
Alignment:
Q  205 ttttttagttccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    |||||||||||||||||||||||   ||||||||| |||||||||||||    
T  29576188 ttttttagttccccaaatgaggagcgttttatattttgaagaaaaataa 29576236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 31530068 - 31530008
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||| |||||| ||||||||    
T  31530068 caaaaccctcccccaatacaatttttgagttcccccaaatgaggaggattttttattatga 31530008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 38317261 - 38317321
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||| |||||| ||||||||    
T  38317261 caaaaccctcccccaatacaatttttgagttcccccaaatgaggaggattttttattatga 38317321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 13270002 - 13269935
Alignment:
Q  184 caaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaaa 250  Q
    ||||||||| |  ||||||||||||| ||||| |||||||||||  |||||| |||||||||||||||    
T  13270002 caaaaccctcccacaatacaatttttgagttctcccaaatgagggagattttttattatgaagaaaaa 13269935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 15498826 - 15498869
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgagga 227  Q
    |||||||||  ||||||||||||||| |||||||||||||||||    
T  15498826 caaaaccctcatccaatacaatttttgagttccccaaatgagga 15498869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 18396260 - 18396181
Alignment:
Q  182 ctcaaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagccccca 260  Q
    ||||||||||| |||||||||  ||||||||||||  |||||| ||| | ||||||||| ||||||||||| | ||||||    
T  18396260 ctcaaaaccctcctccaatactgttttttagttccatcaaatggggagggttttatattttgaagaaaaattaaccccca 18396181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 38366077 - 38366018
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||||||||||||||   |||||| ||||||||    
T  38366077 caaaaccctcccccaatacaatttttgagttccccaaatgagagggattttttattatga 38366018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 54723940 - 54724007
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||||| ||||||||| || | |||||||| | |||||| |||||||||||||||||| || |||||    
T  54723940 tccaatataattttttaatttctcaaatgagtaggattttgtattatgaagaaaaataaacctccaaa 54724007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 18319714 - 18319780
Alignment:
Q  194 ctccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||||||| ||||||||||||  |||||| ||| | ||||||||| ||||||||||| |||||||    
T  18319714 ctccaatacagttttttagttccatcaaatggggagggttttatattttgaagaaaaatgagccccc 18319780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 18398967 - 18398901
Alignment:
Q  194 ctccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||||||| ||||||||||||  |||||| ||| | ||||||||| ||||||||||| |||||||    
T  18398967 ctccaatacagttttttagttccatcaaatggggagggttttatattttgaagaaaaatgagccccc 18398901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 19154099 - 19154025
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccc 258  Q
    ||||||| | |||||||| | |||||||||||||||||| |||   ||| | |||||||||||||| ||||||||    
T  19154099 caaaaccttcctccaatatagttttttagttccccaaattaggggaattctgtattatgaagaaaactaagcccc 19154025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 45823604 - 45823538
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| || ||||||||||||| |||| |||||||||||||   |||| ||||||||||||||    
T  45823604 caaaaccctccttcaatacaatttttaagtttccccaaatgaggagagttttgtattatgaagaaaa 45823538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 48620346 - 48620312
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc 218  Q
    ||||||||| |||||||||||||||||||||||||    
T  48620346 caaaaccctcctccaatacaattttttagttcccc 48620312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 54205878 - 54205820
Alignment:
Q  194 ctccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaat 251  Q
    |||| ||||||||||| |||||||| ||||||||| |||||| | ||||||||||||||    
T  54205878 ctcctatacaatttttgagttcccccaaatgaggaggattttgttttatgaagaaaaat 54205820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 18397121 - 18397076
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||||| | ||||||||||||  ||||||||||||||||||||||    
T  18397121 aatatagaggaaaattgagaaatctttcacattttttgaaagagta 18397076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 21081388 - 21081331
Alignment:
Q  195 tccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||||||||| |||| ||||||||||||| | |||| | ||||||||||||||    
T  21081388 tccaatacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaat 21081331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 21296132 - 21296197
Alignment:
Q  179 tccctcaaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatga 243  Q
    |||||||||||||| | |||||||||||||| ||||| ||||||| |||  |||||| ||||||||    
T  21296132 tccctcaaaaccctcccccaatacaatttttgagttctcccaaataagggggattttttattatga 21296197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 27938817 - 27938922
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaat-gaggatgattttatattatgaagaaaaataagc-ccccaaagtcctctatttcttccact 281  Q
    ||||| ||| |||||||||| ||| |||||||||| ||| ||||  |||| | |||||||||||||||||| | |||||||| |||| ||  ||||||||    
T  27938817 caaaatcctcctccaatacattttgttagttcccccaattgagggagattctgtattatgaagaaaaataaactccccaaagccctccatcccttccact 27938916  T
Q  282 tactca 287  Q
     |||||    
T  27938917 aactca 27938922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 28880199 - 28880154
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||||||| ||||||||||||  ||| ||||||||||||||||||    
T  28880199 aatataggggaaaattgagaaatcttttacattttttgaaagagta 28880154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 48417632 - 48417717
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgatt-ttatattatgaagaaaaataagcccccaaagtcct 267  Q
    ||||| ||| |||||||||||||||| |||| |||||||| | || |||| || |||||||||||||||  | |||||||||||||    
T  48417632 caaaatcctcctccaatacaatttttgagttcccccaaattaagaagattcttgtattatgaagaaaaacgaacccccaaagtcct 48417717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 52430597 - 52430658
Alignment:
Q  194 ctccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataag 254  Q
    |||||||| |||||||||||| ||| |||||||||   ||||||||| ||||||||||||||    
T  52430597 ctccaatataattttttagtttccctaaatgaggagagttttatattttgaagaaaaataag 52430658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 7182223 - 7182283
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  7182223 caaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatga 7182283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 20533976 - 20533916
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  20533976 caaaaccctcccccaatacaatttttgagttcccccaaatgagggagattttttattatga 20533916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 32866762 - 32866829
Alignment:
Q  183 tcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||| || ||||  |||||||||||||||||| |||||||||  | ||| ||||||||||||||||    
T  32866762 tcaaaactctcctccgctacaattttttagttccc-aaatgaggagaactttgtattatgaagaaaaat 32866829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 42650840 - 42650796
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagt 69  Q
    |||||||||||||||||| |||  ||||||| |||||||||||||    
T  42650840 aatatagggaaaaattgataaatctttcacaatttttgaaagagt 42650796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 48620308 - 48620252
Alignment:
Q  204 attttttagttccccaa-atgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||||||||||||| | ||||||| | ||||||||| ||||| |||||||||||||    
T  48620308 attttttagttcccccagatgaggagggttttatattttgaagtaaaataagccccc 48620252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 25561349 - 25561465
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccc------ccaaagtcctctatttcttc 277  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||      |||| |||||||||||||||    
T  25561349 caaaaccctcctccaatataattttttagttccccaaatgacgatggttttatattttgaag-aaaataagcccctccttccaatgtcctctatttcttc 25561447  T
Q  278 cacttactcattcttttt 295  Q
    ||||||||| ||| ||||    
T  25561448 cacttactccttcctttt 25561465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 17556716 - 17556640
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||    
T  17556716 caaaaccctcctccaatagaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataagccccc 17556640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 41817331 - 41817416
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||||| ||||||||||||||||||||||| |||||||| || | |||| |||||||||||||| | | ||||||||||||||    
T  41817331 caaaaccctcctccaatacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaagttaacccccaaagtcctc 41817416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 41432798 - 41432878
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat-aagcccccaaag 263  Q
    ||||||||| ||||||||||| |||| ||| ||||||||||||| | ||||||||||||||||||||| || |||||||||    
T  41432798 caaaaccctcctccaatacaaattttgagtcccccaaatgaggagggttttatattatgaagaaaaatgaaacccccaaag 41432878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 12625856 - 12625931
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||| || ||||||||||| |||||||||| |||||||||||   ||||||||| |||||||||||||||||||    
T  12625856 caaaactctcctccaatacaagtttttagttctccaaatgaggagatttttatattttgaagaaaaataagccccc 12625931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 34552120 - 34552198
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||| | ||||||||| | ||||||||||| |||||||||    
T  34552120 caaaaccttactcca-tacaattttttagttcctcaaatgaggagggttttatattttaaagaaaaataaacccccaaag 34552198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 50097680 - 50097601
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||||||| |||  |||||||||| ||||||||||| ||||| |||||| ||||||||| ||||||||||||| |||||    
T  50097680 ccctcaaaaacctcatccaatacaactttttagttcctcaaataaggatggttttatattttgaagaaaaataaaccccc 50097601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 5584554 - 5584488
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  5584554 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 5584488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 29092135 - 29092050
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||| || ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  29092135 caaaactctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 29092050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 49102986 - 49103054
Alignment:
Q  186 aaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| | |||||| || |||||||||||||    
T  49102986 aaaccctcctccaatacaattttttagttcccccaaatgaggagggttttatgttttgaagaaaaataa 49103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 51303204 - 51303308
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaagtcctctatttcttc 277  Q
    ||||||||||||| ||| ||| |||||||| |||||| ||||||||||| |||||||| |||||| ||||||  || ||||||||  ||| |||||||||    
T  51303204 ccctcaaaaccctcctcaaatgcaatttttgagttccaccaaatgaggaggattttatgttatgatgaaaaacaaaccccccaaatccctttatttcttc 51303303  T
Q  278 cactt 282  Q
    |||||    
T  51303304 cactt 51303308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 295
Target Start/End: Complemental strand, 2909167 - 2909059
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctctatttcttccactt 282  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| | | |||| ||||||||||||    |||  ||||   |||||||||||||||||||    
T  2909167 caaaaccctcctccaatacaattttttagttcctccaaatgagtagggttttctattatgaagaa----aagttcccattttcctctatttcttccactt 2909072  T
Q  283 actcattcttttt 295  Q
    ||| |||| ||||    
T  2909071 acttattcctttt 2909059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 17760507 - 17760573
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  17760507 caaaacccccctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 17760573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 24436964 - 24437038
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagccc 257  Q
    ||||||||| ||| ||||||||||||||  ||||| ||||||||| | ||||||||| |||||||||||||||||    
T  24436964 caaaaccctcctctaatacaattttttaactcccccaaatgaggagggttttatattttgaagaaaaataagccc 24437038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 34154360 - 34154426
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  34154360 caaaacccccctccaatacaattttttagttcctccaaatgaggaaggttttgtattatgaagaaaa 34154426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 46001615 - 46001549
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||| || ||| ||||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  46001615 caaaactctcctcaaatacaattttttagttcctccaaatgaggagggttttatattatgaagaaaa 46001549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 52068169 - 52068235
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||   |||| ||||||||||||||    
T  52068169 caaaaccctcctccaatacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaa 52068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 32287633 - 32287564
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||||  |||||||||||||||||||||| ||||||| || |||| | ||||| ||||||||    
T  32287633 ccctcaaaaccctcatccaatacaattttttagttcctcaaatgaagaggattgtgtattaagaagaaaa 32287564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 37649649 - 37649714
Alignment:
Q  185 aaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| | |||| |||||| |||||||    
T  37649649 aaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattataaagaaaa 37649714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 49102848 - 49102893
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  49102848 aatatagggaaaaattgagaaatctttcacattttttgaaagagta 49102893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 50084173 - 50084101
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccc 257  Q
    |||||| |||||  ||||||||||||||||||||||||||| || | ||||||||| | |||||||||||||||    
T  50084173 caaaactctactaaaatacaattttttagttccccaaatgacgagggttttatatt-ttaagaaaaataagccc 50084101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 28848821 - 28848889
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||| | |||| | ||||||||||||||    
T  28848821 caaaaccctcctccaatacaatttttgagttcccccaaatgaggagggttttgtgttatgaagaaaaat 28848889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 36269782 - 36269726
Alignment:
Q  194 ctccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||||||| ||||||||||||| | |||| ||||||||||||||    
T  36269782 ctccaatacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaa 36269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 50084335 - 50084291
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagt 69  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  50084335 aatataggaaaaaattgagaaatttttcacattttttgaaagagt 50084291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 14153160 - 14153101
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||  |||||| ||||||||    
T  14153160 caaaaccctaccccaatacaatttttgagttccctaaatgagggagattttttattatga 14153101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 33579282 - 33579219
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaa 248  Q
    |||||||| ||||||||||| |||| ||||||||||||||||| | |||| |||||| ||||||    
T  33579282 aaaaccctcctccaatacaacttttgagttccccaaatgaggagggttttgtattataaagaaa 33579219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 42333693 - 42333626
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||| || ||||||||||| | |||||||||| ||||||||| | |||| ||||||||||||||||    
T  42333693 caaaactctcctccaatacaactctttagttccctaaatgaggagggttttgtattatgaagaaaaat 42333626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 43036355 - 43036425
Alignment:
Q  194 ctccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaag 263  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||| ||| |||||||||    
T  43036355 ctccaatacaattttttagttctcccaaatgaggagggttttatatt-tgaagaaaaattaaccccccaaag 43036425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 45565178 - 45565119
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | ||||||||||||||||||||| |||||||||  |||||| ||||||||    
T  45565178 caaaaccctcccccaatacaattttttagttcctcaaatgagggagattttttattatga 45565119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 7915562 - 7915476
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaat-aagcccccaaagtcctc 268  Q
    ||||||||| |||||||||||||||| | | |||| ||||||||| | || |||||||||||||||||| || ||||||||| ||||    
T  7915562 caaaaccctcctccaatacaatttttgaatcccccaaaatgaggagggttctatattatgaagaaaaatgaaccccccaaagccctc 7915476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 42806209 - 42806151
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    ||||||||||||||||||| ||| ||||||| | | ||||||||| |||||||||||||    
T  42806209 tccaatacaattttttagtccccaaaatgagaagggttttatattttgaagaaaaataa 42806151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 50476586 - 50476520
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaa 250  Q
    |||||||| |||||||||||||||| ||||||| |||||||||  |||||| ||||||||| |||||    
T  50476586 aaaaccctcctccaatacaatttttgagttccctcaaatgagggggattttgtattatgaataaaaa 50476520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 52331082 - 52331028
Alignment:
Q  200 tacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataa 253  Q
    |||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||    
T  52331082 tacaatttttaagttcctacaaatgaggatgattttgtattatgaagaaaaataa 52331028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 23412000 - 23412053
Alignment:
Q  199 atacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||||||||||||||| ||||||||||| ||||||  |||||||||||||||    
T  23412000 atacaattttttagttcctccaaatgaggaggattttgaattatgaagaaaaat 23412053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 50097822 - 50097777
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||    
T  50097822 aatataaggaaaaattgagaaatctttcacattttttgaaagagta 50097777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 51839230 - 51839299
Alignment:
Q  199 atacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||||||||||||| ||||| |||| |||||| |||| ||||||||| ||| ||| ||||| ||||    
T  51839230 atacaattttttagttcctcaaattaggaggattttgtattttgaagaaaactaaacccacaaagccctc 51839299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 5883477 - 5883521
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagt 69  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||    
T  5883477 aatataggaaaaaattgagaaatttttcatattttttgaaagagt 5883521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 17416750 - 17416814
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||| || |||||||||||||||| ||||||| ||||||  | |||||| ||||||||||||||    
T  17416750 aaaactcttctccaatacaatttttgagttcccaaaatgaaaaagattttgtattatgaagaaaa 17416814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 36886917 - 36886833
Alignment:
Q  185 aaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||  | |||  |||||||||||||| | | ||||||||| ||||    
T  36886917 aaaaccctcctccaatgcaattttttagttccccaaaatgaggggggtttagtattatgaagaaaagttaacccccaaagccctc 36886833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 51246591 - 51246655
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||||   |||||| ||||||||    
T  51246591 ccctcaaaaccctcctccaatacaatttttgagttcccccaaatgagagagattttttattatga 51246655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 1688261 - 1688308
Alignment:
Q  196 ccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    |||||||||||||| ||||||||||||||||  |||||| ||||||||    
T  1688261 ccaatacaatttttgagttccccaaatgagggggattttttattatga 1688308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 9595617 - 9595558
Alignment:
Q  191 ctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| ||||||||||||||| |||||||| |||  |||||| ||||||||||||||    
T  9595617 ctactccactacaattttttagttcccccaaattagggggattttgtattatgaagaaaa 9595558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 34749694 - 34749647
Alignment:
Q  204 attttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||||| |||||||||||| | |||| ||||||||||||||||    
T  34749694 attttttagtttcccaaatgaggacgtttttgtattatgaagaaaaat 34749647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 36269469 - 36269536
Alignment:
Q  197 caatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||||||||||||||||||| |||| | |  |||||||| |||| ||||||||||| |||||||||    
T  36269469 caatacaattttttagttcccccaaattatggggattttatgttatcaagaaaaataaccccccaaag 36269536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 50587094 - 50587010
Alignment:
Q  183 tcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat-aagcccccaaagtcctc 268  Q
    |||||||||| ||||||| |||||||  | |  |||||||||||| |||||| |||||||||||||||| || ||||||||| ||||    
T  50587094 tcaaaaccctcctccaatgcaatttt--aatggcccaaatgaggaggattttgtattatgaagaaaaatgaaccccccaaagccctc 50587010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 15426294 - 15426375
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt--ccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||| || |||||||||||||||| ||||  ||||||||| | ||||||||  ||||||||||||| ||| ||| |||||    
T  15426294 caaaactcttctccaatacaatttttgagttccccccaaatgtgaatgattttgcattatgaagaaaactaacccctcaaag 15426375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 47742483 - 47742445
Alignment:
Q  263 gtcctctatttcttccacttactcattctttttcttcaa 301  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  47742483 gtcctctatttcttccacttactccttcttttttttcaa 47742445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 25561191 - 25561236
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||||| | ||||||||||||  ||||||||||||||||||||||    
T  25561191 aatatagaggaaaattgagaaatctttcacattttttgaaagagta 25561236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 30543385 - 30543450
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaa-atgaggatgattttatattatgaagaaa 248  Q
    ||||||||| |  ||||||||||||| |||||||| | ||||||| |||||| |||||||||||||    
T  30543385 caaaaccctccagcaatacaatttttgagttcccccacatgaggaagattttgtattatgaagaaa 30543450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 36385543 - 36385506
Alignment:
Q  28 atagggaaaaattgagaaaattttcacattttttgaaa 65  Q
    |||||||||||||||||||  |||||||||||||||||    
T  36385543 atagggaaaaattgagaaatctttcacattttttgaaa 36385506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 39886968 - 39887024
Alignment:
Q  195 tccaatacaattttttagttcc--ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||||||||  ||||||||||| | |||  ||||||||||||||    
T  39886968 tccaatacaattttttagttcccaccaaatgaggagggtttagtattatgaagaaaa 39887024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 41428021 - 41428093
Alignment:
Q  179 tccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgatt-ttatattatgaagaaaaat 251  Q
    |||| ||||| ||| |||||||| ||||||| ||||||||||||||||| |||| ||  |||||||||||||||    
T  41428021 tcccccaaaatcctcctccaatataatttttgagttccccaaatgagga-gattctttcattatgaagaaaaat 41428093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 43530170 - 43530215
Alignment:
Q  24 gaatatagggaaaaattgagaaaattttcacattttttgaaagagt 69  Q
    |||||||||| ||||||||||||  ||||||||||||| |||||||    
T  43530170 gaatataggggaaaattgagaaatctttcacattttttaaaagagt 43530215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 50226088 - 50226023
Alignment:
Q  185 aaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||| || ||||||||||||||||||||||  ||||||||| | | ||| |||||||||||||||    
T  50226088 aaaacgctcctccaatacaattttttagttcttccaaatgagaagggtttaatattatgaagaaaa 50226023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 69769 - 69717
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||||||||||| |||| ||||| | |||  ||||||||||||||    
T  69769 caatacaattttttagttcctcaaacgaggagggtttagtattatgaagaaaa 69717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 12293859 - 12293799
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  12293859 caaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatga 12293799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 17557000 - 17556956
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagt 69  Q
    ||||||||||||||| ||||||  ||||||||||||| |||||||    
T  17557000 aatatagggaaaaatagagaaatctttcacatttttttaaagagt 17556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 18937374 - 18937306
Alignment:
Q  183 tcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||| ||| |||||||||||||||| ||||| | |  ||||||  ||||||||| ||||||||||||    
T  18937374 tcaaaatcctcctccaatacaatttttgagttctctatgtgaggagaattttatataatgaagaaaaat 18937306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 23871495 - 23871555
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  23871495 caaaaccctccgccaatacaatttttgagttcccccaaatgagggagattttttattatga 23871555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 33991590 - 33991530
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  33991590 caaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatga 33991530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 45752268 - 45752327
Alignment:
Q  196 ccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcc 256  Q
    ||||||||||||||||||||||| ||||  || | ||||||||| |||||||||| |||||    
T  45752268 ccaatacaattttttagttcccc-aatggagaaggttttatattttgaagaaaaacaagcc 45752327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 52073480 - 52073548
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||| ||| | |||||||||| |||||||| ||||||||| | ||||  |||||||||||||||    
T  52073480 caaaaccctcctctagtacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaat 52073548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 19389850 - 19389928
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| | ||||||||    
T  19389850 caaaatcctcctccaatacaattttttagttccccaaatgaggaggattttgtattatgaagataaatgaacccccaaa 19389928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 7398825 - 7398893
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtc 265  Q
    ||||||||||||  ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  7398825 caatacaattttaaagttccccaaatgaggatgattttgaattatgaagaaaaatgagcccccaaagtc 7398893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 39428990 - 39428918
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcc 256  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||    
T  39428990 caaaaccctcctctaatacaattttttagttcctcaaatgaggaagattttatattttgaagataaataagcc 39428918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 3938162 - 3938238
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| | | |||||||||  ||||||||||||||||||    
T  3938162 caaaatcctactccaatacaattttttagttccccaaaatgagcagggttttatatttcgaagaaaaataagccccc 3938238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 6491223 - 6491147
Alignment:
Q  194 ctccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctct 269  Q
    |||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| | ||||||||| |||||    
T  6491223 ctccaatacaatttttgagttcccccaaatgaggaagattttgtattatgaagaaaaatgaacccccaaagccctct 6491147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 3925824 - 3925897
Alignment:
Q  195 tccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||||||||||||||||||||||||||||  ||| ||||| |||||||||||| |  |||| ||||||||    
T  3925824 tccaatacaattttttagttccccaaatgaggagaattctatatcatgaagaaaaattaatcccccaagtcctc 3925897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 5772752 - 5772837
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  5772752 caaaaccctcctccaatacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 5772837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 35708785 - 35708866
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaa-taagcccccaaag 263  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||| ||||||||| | |||||||||| ||| |||||||||    
T  35708785 caaaaccctcctccagtacaattttttagttccctcaaatgaggaggattttatactttgaagaaaaactaaccccccaaag 35708866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 6373201 - 6373123
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaa 247  Q
    |||||||||  ||| ||||||  | ||| |||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  6373201 ccctcccaaaccccccaaaactttcctcgaatacaattttttagttccccaaatgaggagggttttatattttgaagaa 6373123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 43496895 - 43496977
Alignment:
Q  186 aaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||| |||||||||||||||| ||||||||||||||| |   |||| |||||| ||||||||| | ||||||||| ||||    
T  43496895 aaaccctcctccaatacaatttttaagttccccaaatgagcagagttttgtattattaagaaaaattaacccccaaagccctc 43496977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 10843093 - 10843008
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||| | || |||||||||||||||||||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  10843093 caaaaccgtccttcaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 10843008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 12063855 - 12063900
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  12063855 aatatagggaaaaattgagaaatttttcatattttttgaaagagta 12063900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 12150631 - 12150563
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaata 252  Q
    ||||| ||| |||||||||||||||||||||||  |||| |||  |||||| |||||||||||||||||    
T  12150631 caaaatcctcctccaatacaattttttagttccttaaattagggagattttgtattatgaagaaaaata 12150563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 29022666 - 29022598
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    |||||| | |||||||||||||||||||||||  |||||||||   ||||||||| |||||||||||||    
T  29022666 aaaaccgtcctccaatacaattttttagttccttaaatgaggagagttttatattttgaagaaaaataa 29022598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 35683515 - 35683571
Alignment:
Q  194 ctccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  35683515 ctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 35683571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 13569412 - 13569333
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||||||| |||||||| |||||| ||||||| |||||||||||  ||||| |||||||||||||| | | ||||||||    
T  13569412 caaaaccctcctccaatataattttgtagttcctccaaatgaggaaaattttgtattatgaagaaaagttaacccccaaa 13569333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 29799695 - 29799624
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagc 255  Q
    |||||||||  ||||||||| ||||||||||||||| || | || | ||||||||| |||||||||||||||    
T  29799695 caaaaccctcatccaatacagttttttagttccccacataaagagggttttatattttgaagaaaaataagc 29799624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 10438035 - 10437969
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||| ||||||||||| | ||||||||| |||||| |||||| |||||||    
T  10438035 caaaaccctcctccaatacaactttttagttcctctaaatgaggaggattttgtattataaagaaaa 10437969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 10955718 - 10955788
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||| |||||||||||| |||||||| ||||||||||||| | |||| |||||||| |||||    
T  10955718 ccctcaaaatcctcctccaatacaatcttttagttcccccaaatgaggagggttttgtattatgatgaaaa 10955788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 14570072 - 14570138
Alignment:
Q  184 caaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| | |||  |||||| |||||||    
T  14570072 caaaaccctactccaatataattttttagttctcccaaatgaggagggtttagtattataaagaaaa 14570138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 18671079 - 18671017
Alignment:
Q  186 aaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaa 248  Q
    ||||||| ||||||||||||||||||||||| |||||||  | |||||  |||||||||||||    
T  18671079 aaacccttctccaatacaattttttagttcctcaaatgaaaaagatttagtattatgaagaaa 18671017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 38568399 - 38568465
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||| | |||  ||||||||||||||    
T  38568399 caaaaccctcctccaatataattttttagttcccccaaatgaggagggtttagtattatgaagaaaa 38568465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 39649620 - 39649554
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||| | |||| ||| ||||||||||    
T  39649620 caaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaa 39649554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 41638406 - 41638344
Alignment:
Q  181 cctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||   ||||| ||||||||    
T  41638406 cctccaaaccctcccccaatacaattttttagttccccaaatgagggaaattttttattatga 41638344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 3081374 - 3081443
Alignment:
Q  195 tccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||||| |||||||||||||   |||||||||| | ||||||||  |||||||||||||||||||||||    
T  3081374 tccaatataattttttagttctatcaaatgaggagggttttatatattgaagaaaaataagcccccaaag 3081443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 18675745 - 18675810
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| |||||||| ||| ||||||||||||||||||| | |||||  ||||| ||||||||    
T  18675745 caaaacccttctccaatataatcttttagttccccaaatgagaaggatttagtattacgaagaaaa 18675810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 41695031 - 41694966
Alignment:
Q  179 tccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    |||||||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  41695031 tccctcaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatga 41694966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 25026971 - 25026911
Alignment:
Q  184 caaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||||||||| |||||||||||  |||||| ||||||||    
T  25026971 caaaacccttccccaatacaattttttagttctcccaaatgagggagattttttattatga 25026911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 37909050 - 37908974
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||||||| ||||||||||| |||| |||| |||| ||| ||| ||||||| |||||||||||||| ||| |||||    
T  37909050 caaaaccctcctccaatacaacttttgagtttccccgaattaggttgattttgtattatgaagaaaattaaaccccc 37908974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 12229495 - 12229570
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataagcccc 258  Q
    ||||||||| ||| ||||||||||| ||||| |||||||| |||  ||||||  ||||||||||||| ||||||||    
T  12229495 caaaaccctcctctaatacaattttgtagttcccccaaatcagggggattttgaattatgaagaaaactaagcccc 12229570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 6491391 - 6491441
Alignment:
Q  219 aaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctct 269  Q
    ||||||||| |||||| |||||||||||||||| | ||||||||| |||||    
T  6491391 aaatgaggaagattttgtattatgaagaaaaatgaacccccaaagccctct 6491441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 9096368 - 9096302
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaa 249  Q
    ||||| ||| ||||||||||||| || |||||||| |||| |||| |||||| ||||||||||||||    
T  9096368 caaaatcctcctccaatacaattgttgagttcccccaaattaggaagattttgtattatgaagaaaa 9096302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 29709572 - 29709478
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaat-aagcccccaaagtcctctatttctt 276  Q
    ||||| ||| |||| ||||||||||||||||||  ||||||||||  ||||| ||||||| |||||| | || ||| |||| |||||||||||||    
T  29709572 caaaatcctcctccgatacaattttttagttccttcaaatgaggagaattttgtattatggagaaaagtgaacccctcaaaatcctctatttctt 29709478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 12064108 - 12064145
Alignment:
Q  258 ccaaagtcctctatttcttccacttactcattcttttt 295  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  12064108 ccaatgtcatctatttcttccacttactcattcttttt 12064145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 22103551 - 22103487
Alignment:
Q  197 caatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||||||||||| |||||||| ||||| || | |||| |||||||||||||||| | ||||||||    
T  22103551 caatacaattttt-agttccccgaatgatgagggttttgtattatgaagaaaaattaacccccaaa 22103487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 13294010 - 13294066
Alignment:
Q  188 accctactccaatacaattttttagttccccaaatgaggatgattttatattatgaa 244  Q
    ||||| |||||||||||||||| |||| |  ||||||||| |||||| |||||||||    
T  13294010 accctcctccaatacaatttttaagtttcttaaatgaggaggattttgtattatgaa 13294066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 27480205 - 27480261
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccc-caaatgaggatgattttatatta 240  Q
    |||||||| | |||||||||||||| ||||||| |||||||||| |||||| |||||    
T  27480205 aaaaccctcccccaatacaatttttgagttccctcaaatgaggaggattttttatta 27480261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 35701109 - 35701049
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  35701109 caaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatga 35701049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 7435657 - 7435725
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| | ||||||||||    
T  7435657 ctccaatacaattttttagttctccagatgaggaggattttatattatgaagaaaagttagcccccaaa 7435725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 35283151 - 35283055
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaag 263  Q
    |||||||||  ||||||||||| | ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||| ||| |||||||||    
T  35283151 ccctcccaaacccctcaaaaccttcctccaatacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaattaaccccccaaag 35283055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 53888551 - 53888460
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||||||  ||| ||||||||| ||||||||||||||||||||| |||||||  |||| | ||||||||| |||||||||||||||||||    
T  53888551 ccctcccaaaccccccaaaaccctcctccaatacaattttttagttcccccaaacaaggagggttttatattttgaagaaaaataagccccc 53888460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 48444555 - 48444485
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataag 254  Q
    |||||||||  |||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||    
T  48444555 caaaaccctcatccaatacaattttttagatccccaaatgaggaaggttttatattttgaagaaaaataag 48444485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 33944672 - 33944757
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  33944672 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 33944757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 3458328 - 3458388
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataag 254  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||    
T  3458328 ctccaatacaattttttagttccccaaacgaggacggttttatattttgaagaaaaataag 3458388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 263
Target Start/End: Complemental strand, 32858879 - 32858799
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||| || ||| |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| | |||||||||    
T  32858879 caaaactctcctcgaatacaatttttgagttcccccaaatgaggaggattttatattatgaagaaaaatgaacccccaaag 32858799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 38639638 - 38639572
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  38639638 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 38639572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 53664632 - 53664697
Alignment:
Q  185 aaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  53664632 aaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 53664697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 50345678 - 50345750
Alignment:
Q  183 tcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagc 255  Q
    ||||||||||  |||||||||||| |||||||||||||| |||||   ||||||||| |||||||||||||||    
T  50345678 tcaaaaccctcatccaatacaattctttagttccccaaacgaggagtgttttatattttgaagaaaaataagc 50345750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 51686554 - 51686490
Alignment:
Q  185 aaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| |||||||||||||||||||||||||||||||||  | |||  ||||||||||||||    
T  51686554 aaaaccctcctccaatacaattttttagttccccaaatgaggggggtttagtattatgaagaaaa 51686490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 16883393 - 16883318
Alignment:
Q  194 ctccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctct 269  Q
    ||||||||||||||||| ||| |||||| ||||| |||||  |||||||||||||||| | ||| |||||||||||    
T  16883393 ctccaatacaatttttttgtttcccaaacgaggaggatttggtattatgaagaaaaattaaccctcaaagtcctct 16883318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 29623289 - 29623218
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||||||| || |||||||| |||| |||| |||||||||||| | |||| ||||||||||||||||    
T  29623289 ccctcaaaaccctcctgcaatacaacttttgagtttcccaaatgaggagggttttgtattatgaagaaaaat 29623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 45570976 - 45571043
Alignment:
Q  185 aaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||    
T  45570976 aaaatcctcctccaatacaattttttagttcccccaaatgaggagggtttaatattatgaagaaaaat 45571043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 3537257 - 3537191
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||| || ||||||||||||||||||||| ||||||||||||| | |||| ||||||||||||||    
T  3537257 caaaactctcctccaatacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaa 3537191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 5939813 - 5939879
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| |||||||||| |||| ||||||| ||||||||||| |||||| ||||||||||||||    
T  5939813 caaaaccctcctccaatacagttttgtagttcctccaaatgaggaagattttgtattatgaagaaaa 5939879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 25754134 - 25754200
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  25754134 caaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 25754200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 33908981 - 33909047
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||| | |||| ||||||||||||||    
T  33908981 caaaaccctcctccaatacaactttttagtttccccaaatgaggagggttttgtattatgaagaaaa 33909047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 11500143 - 11500078
Alignment:
Q  194 ctccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaaataagcccc 258  Q
    |||||||||||||||||||||  |||||||||||| | |||| |||||||||||||||||| ||||    
T  11500143 ctccaatacaattttttagttatcccaaatgaggagggttttctattatgaagaaaaataaccccc 11500078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 32721095 - 32721172
Alignment:
Q  186 aaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||||| ||||||| |||||||| |||| ||||||||| ||   ||||||||| |||||||||||||| ||||||||    
T  32721095 aaacccttctccaatgcaatttttgagtttcccaaatgaagagagttttatattttgaagaaaaataagtccccaaag 32721172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 50948254 - 50948189
Alignment:
Q  185 aaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||| ||||||||||||||||||||||| |||| |||||| | |||| ||||||||||||||    
T  50948254 aaaaccctcctccaatacaattttttagttcctccaactgaggagggttttgtattatgaagaaaa 50948189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 15499341 - 15499397
Alignment:
Q  194 ctccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaa 249  Q
    |||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||    
T  15499341 ctccaatacaatttttgagttctcccaaatgaggaagattttgtattatgaagaaaa 15499397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 35989166 - 35989102
Alignment:
Q  183 tcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaa 247  Q
    ||||||| || ||| ||||||||||||||||||||||||| |||| | ||| |||||||||||||    
T  35989166 tcaaaactctcctctaatacaattttttagttccccaaattaggagggtttaatattatgaagaa 35989102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 1132957 - 1133036
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||   |||| |||||||||| ||||| | ||||||||    
T  1132957 caaaaccctcctccaatacaatttttgagttccccaaaatgaggagagttttgtattatgaagtaaaatgaacccccaaa 1133036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 47714705 - 47714764
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| ||||||||||||||||  |||||| ||||||||    
T  47714705 caaaaccctcccccaatacaatttttgagttccccaaatgagggagattttttattatga 47714764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 49855840 - 49855919
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaa 262  Q
    ||||||||| || ||||||||||||| |||||| | ||||||| || ||||| |||||||||||||||| | ||||||||    
T  49855840 caaaaccctccttcaatacaatttttgagttcctctaaatgagaattattttgtattatgaagaaaaatgaacccccaaa 49855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 33281734 - 33281808
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataa 253  Q
    ||||||||| |||  ||||||||||||||| ||||||   ||||||||| |||||||||||||||| ||||||||    
T  33281734 ccctcaaaatcctcttccaatacaatttttgagttcctataaatgaggaggattttatattatgaaaaaaaataa 33281808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 48370212 - 48370278
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaa 250  Q
    ||||| ||| |||| ||||||||||| |||||||||||||||   |||||||||||||||| |||||    
T  48370212 caaaatccttctccgatacaatttttgagttccccaaatgagtgagattttatattatgaataaaaa 48370278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 52620853 - 52620907
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttc-cccaaatgaggatgattt 233  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||||| |||||    
T  52620853 ccctcaaaaccctcctccaatacaatttttgagttctcccaaatgaggaggattt 52620907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 44400758 - 44400673
Alignment:
Q  184 caaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    ||||||||| ||||||||||||||||||||||  |||||||| || | |||| ||| |||||||||| | | ||||||||| ||||    
T  44400758 caaaaccctcctccaatacaattttttagttcgtccaaatgaagagggttttgtatcatgaagaaaagttaacccccaaagccctc 44400673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 49183744 - 49183679
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| |  ||  ||||||||||||||    
T  49183744 caaaaccctcctctaatacaattttttagttctccaaatgaggagggattagtattatgaagaaaa 49183679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 3354036 - 3353960
Alignment:
Q  202 caattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctctatttcttcc 278  Q
    |||||||||| ||||||||| |||||   ||||||||| |||||||||||||||| || | || |||||||| ||||    
T  3354036 caattttttaattccccaaacgaggagagttttatattttgaagaaaaataagcctcccatgttctctattttttcc 3353960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 24588327 - 24588383
Alignment:
Q  196 ccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaat 251  Q
    |||||||||||||| |||||| ||||||||||  |||||| ||||||||||||||||    
T  24588327 ccaatacaatttttgagttcctccaaatgagggggattttgtattatgaagaaaaat 24588383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 27197301 - 27197237
Alignment:
Q  184 caaaaccctactccaatacaatttttt-agttccccaaatgaggatgattttatattatgaagaa 247  Q
    |||||||||  |||||||||||||||| |||||| |||||||||| | |||| ||||||||||||    
T  27197301 caaaaccctcatccaatacaatttttttagttcctcaaatgaggagggttttgtattatgaagaa 27197237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 40118926 - 40119002
Alignment:
Q  194 ctccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaa-taagcccccaaagtcctc 268  Q
    ||||||||||||||||||||| ||||||||||||| | |||| | | ||||||||||| ||| ||||||||| ||||    
T  40118926 ctccaatacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaaaattaaccccccaaagccctc 40119002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 48908906 - 48908986
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||||||| |||||||| |||||||||||||| |||||| | || | |||| |||||||||||||| | | |||||||||    
T  48908906 caaaaccctcctccaatataattttttagttcctccaaattatgagggttttgtattatgaagaaaagttaacccccaaag 48908986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 2420707 - 2420660
Alignment:
Q  196 ccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    |||||||||||||| ||||||||||||||||  |||||| ||||||||    
T  2420707 ccaatacaatttttgagttccccaaatgagggagattttttattatga 2420660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 17642638 - 17642579
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    |||||||||  ||| ||||||||||| ||||||||||||||||  |||||| ||||||||    
T  17642638 caaaaccctcatccgatacaatttttgagttccccaaatgagggagattttttattatga 17642579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 27922025 - 27921927
Alignment:
Q  170 cctcccaagtccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctct 269  Q
    ||||||||  ||| |||||||||  |||||||||| |||| |||| || | | ||||| | ||||||||| |||| |||||||| |||||||||||||||    
T  27922025 cctcccaaaccccccaaaaccctcttccaatacaacttttgagtttccaagacgaggagggttttatattttgaa-aaaaataaacccccaaagtcctct 27921927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 40674314 - 40674272
Alignment:
Q  26 atatagggaaaaattgagaaaattttcacattttttgaaagag 68  Q
    ||||| |||||||||||||||  ||||||||||||||||||||    
T  40674314 atatatggaaaaattgagaaacctttcacattttttgaaagag 40674272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 44979458 - 44979404
Alignment:
Q  194 ctccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaa 247  Q
    ||||||||||||||||||||| |||||||| |||  ||||| |||||||||||||    
T  44979458 ctccaatacaattttttagttcccccaaattagggggatttaatattatgaagaa 44979404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 47434347 - 47434417
Alignment:
Q  180 ccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaa 250  Q
    ||||||||||||| |  ||| ||||||||| |||||||||||||||   |||||| ||||||||| |||||    
T  47434347 ccctcaaaaccctccctcaacacaatttttgagttccccaaatgagatggattttttattatgaataaaaa 47434417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 3333928 - 3333839
Alignment:
Q  169 ccctcccaagtccctcaaaaccctactccaatacaatttttt-agttccccaaatgaggatgattttatattatgaagaaaaataagccc 257  Q
    ||||||||| |||| ||||||| | ||||||  ||||||||| |  |||||||||||||| | ||| ||||| |||||||| ||||||||    
T  3333928 ccctcccaaatcccccaaaaccttcctccaagtcaatttttttaactccccaaatgaggagggtttcatattttgaagaaatataagccc 3333839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 36638007 - 36637962
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    ||||||||| ||||||||||||  ||||||||||||||||| ||||    
T  36638007 aatataggggaaaattgagaaatctttcacattttttgaaaaagta 36637962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 38401952 - 38402017
Alignment:
Q  195 tccaatacaattttttagttcccc-aaatgaggatgatt-ttatattatgaagaaaaataagcccc 258  Q
    |||||||||||||||||||||||| |||||| || | || | ||||| ||||||||||||||||||    
T  38401952 tccaatacaattttttagttcccctaaatgacgaaggttctaatattttgaagaaaaataagcccc 38402017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 49860563 - 49860608
Alignment:
Q  204 attttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||    
T  49860563 attttttagttccccaaatgaggagaattttgtattatgaaaaaaa 49860608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 50201776 - 50201731
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaagagta 70  Q
    |||||||||||||||||| |||  ||||||| ||||||||||||||    
T  50201776 aatatagggaaaaattgaaaaatctttcacaatttttgaaagagta 50201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 50535135 - 50535196
Alignment:
Q  185 aaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaag 245  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||| | |||  ||||||||||    
T  50535135 aaaatccttctccaatacaattttttagttcccctaaatgaggagggtttagtattatgaag 50535196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 53888694 - 53888653
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaag 66  Q
    ||||||||| ||||||||||||  ||||||||||||||||||    
T  53888694 aatataggggaaaattgagaaatctttcacattttttgaaag 53888653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 517664 - 517731
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaat 251  Q
    ||||||||| || ||||||||||||  |||||||| ||||||||| | |||| ||||||||||||||||    
T  517664 caaaaccctccttcaatacaattttg-agttcccccaaatgaggagggttttgtattatgaagaaaaat 517731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 3457471 - 3457511
Alignment:
Q  25 aatatagggaaaaattgagaaaattttcacattttttgaaa 65  Q
    |||||||||||||||| |||||  |||||||||||||||||    
T  3457471 aatatagggaaaaattaagaaatctttcacattttttgaaa 3457511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 214
Target Start/End: Complemental strand, 3990056 - 3990028
Alignment:
Q  186 aaaccctactccaatacaattttttagtt 214  Q
    |||||||||||||||||||||||||||||    
T  3990056 aaaccctactccaatacaattttttagtt 3990028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 11040870 - 11040930
Alignment:
Q  194 ctccaatacaattttttagtt-ccccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    |||||||||||||||| |||| |||||||| |||  |||||| ||||||| ||||||||||    
T  11040870 ctccaatacaatttttgagttcccccaaataagggagattttgtattatggagaaaaataa 11040930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 21777668 - 21777748
Alignment:
Q  184 caaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    |||||| || |||||||||||||||| | ||| ||||||||| ||   |||| |||||||||||||||| | |||||||||    
T  21777668 caaaactctcctccaatacaatttttgatttctcccaaatgatgagagttttgtattatgaagaaaaatgaacccccaaag 21777748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 24242124 - 24242184
Alignment:
Q  184 caaaaccctactccaatacaattttttagtt-ccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||| ||||||||    
T  24242124 caaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatga 24242184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 31178278 - 31178338
Alignment:
Q  184 caaaaccctactccaatacaattttttagttc-cccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| ||||| |||||||||||  |||||| ||||||||    
T  31178278 caaaacccttccccaatacaatttttaagttctcccaaatgagggagattttttattatga 31178338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 37674182 - 37674238
Alignment:
Q  194 ctccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||||||||| | ||||||||| | |||| ||| ||||||||||    
T  37674182 ctccaatacaattttttagttcctcaaaatgaggagggttttgtatcatgaagaaaa 37674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 38526190 - 38526142
Alignment:
Q  196 ccaatacaattttttagttcccc-aaatgaggatgattttatattatga 243  Q
    |||||||||||||| |||||||| ||||||||  |||||||||||||||    
T  38526190 ccaatacaatttttgagttcccccaaatgagggagattttatattatga 38526142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 49304263 - 49304191
Alignment:
Q  198 aatacaattttttagttcccc-aaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctct 269  Q
    |||||||||||| |||||| | ||||||| | |||||| |||  ||||||||||||| ||||||||| |||||    
T  49304263 aatacaatttttgagttcctctaaatgagtaagattttgtatcgtgaagaaaaataaacccccaaagccctct 49304191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 54917792 - 54917744
Alignment:
Q  211 agttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||||||||| |||| |||||| ||||| |||||||||||| |||||    
T  54917792 agttccccaaattaggaggattttgtattacgaagaaaaataaaccccc 54917744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 9437 - 9511
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    ||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||    
T  9437 caaaaccctcctccagtacaattttttagttccccaaatgagaatgactttatatt-ttaagaaaaataagccccc 9511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 9765 - 9722
Alignment:
Q  206 tttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||| | || |||||||||||||||||||||    
T  9765 tttttagttccccaaattaagaggattttatattatgaagaaaa 9722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 228 - 308
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaag 263  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||| | |||| |||||||||||||| | | |||||||||    
T  228 caaaaccctcctccaatacaattttttagttcctccaaataaggagggttttgtattatgaagaaaagttaacccccaaag 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 6789 - 6855
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||| | |||| ||||||||||||||    
T  6789 caaaaccctcctccaatacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaa 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 7772 - 7838
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||| | |||| ||||||||||||||    
T  7772 caaaaccctcctccaatacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaa 7838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 723 - 788
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||| | |||||| ||||| |||||||||| |||||||||| | |||| ||||||||||||||    
T  723 caaaaccatcctccaagacaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaa 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 3600 - 3665
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||| | |||||| ||||| |||||||||| |||||||||| | |||| ||||||||||||||    
T  3600 caaaaccatcctccaagacaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaa 3665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 93538 - 93604
Alignment:
Q  184 caaaaccctactccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||   |||| ||||||||||||||    
T  93538 caaaaccctcctccaatacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaa 93604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 7551 - 7494
Alignment:
Q  197 caatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataa 253  Q
    |||||||||||||||||||| |||||||| || |||||| ||||||||||||||||||    
T  7551 caatacaattttttagttcctccaaatgacgaagattttgtattatgaagaaaaataa 7494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 15971 - 15899
Alignment:
Q  179 tccctcaaaaccctactccaatacaattttttagttccccaaatgaggatgattttat-attatgaagaaaaat 251  Q
    |||| ||||||||| |||||||||||||||| | ||||||||||||||| |||||| | |||||||||||||||    
T  15971 tcccccaaaaccctcctccaatacaatttttaaattccccaaatgagga-gattttttcattatgaagaaaaat 15899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 2065 - 2140
Alignment:
Q  194 ctccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaaataagcccccaaagtcctc 268  Q
    |||||||||||||||| |||||| ||||||||||| | |||| |||||||||||||| | | ||||||||| ||||    
T  2065 ctccaatacaatttttcagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctc 2140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 26429 - 26362
Alignment:
Q  184 caaaaccctactccaa-tacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||| | |||| ||||||||||||||    
T  26429 caaaaccctcctccaaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 26362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 82835 - 82769
Alignment:
Q  194 ctccaatacaattttttagttccc-caaatgaggatgattttatattatgaagaaaaataagccccc 259  Q
    |||||||||||||||  ||||||| ||||| |||| |||||| |||||||||||||||||| |||||    
T  82835 ctccaatacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaataaaccccc 82769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 3297 - 3237
Alignment:
Q  185 aaaaccctactccaatacaatttttta-gttccccaaatgaggatgattttatattatgaa 244  Q
    ||||| || ||| |||||||||||||| |||||||||||||||| |||||| |||||||||    
T  3297 aaaactcttctctaatacaattttttaagttccccaaatgaggaggattttgtattatgaa 3237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 29283 - 29227
Alignment:
Q  194 ctccaatacaattttttagttcc-ccaaatgaggatgattttatattatgaagaaaa 249  Q
    ||||||||||||||||||||||| |||||||| || | |||| ||||||||||||||    
T  29283 ctccaatacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaa 29227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 35487 - 35546
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatga 243  Q
    ||||||||| | |||||||||||||| ||||||||||||||||   ||||| ||||||||    
T  35487 caaaaccctcccccaatacaatttttgagttccccaaatgaggggaattttttattatga 35546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 74722 - 74784
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccc-caaatgaggatgattttatattatgaag 245  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||  |||||| ||||||||||    
T  74722 caaaaccctcctccaatacaatttttcagttccctcaaattagggggattttgtattatgaag 74784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 56568 - 56641
Alignment:
Q  184 caaaaccctactccaatacaattttttagttccccaaatgaggatgattttatattatgaagaaaaataagccc 257  Q
    ||||| ||| |||||||| ||||||||||||| |||||| ||    |||||||||||| ||||||| |||||||    
T  56568 caaaatcctcctccaatataattttttagttctccaaataagaggtattttatattattaagaaaactaagccc 56641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University