View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15667_low_8 (Length: 433)

Name: NF15667_low_8
Description: NF15667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15667_low_8
NF15667_low_8
[»] chr6 (18 HSPs)
chr6 (1-417)||(3201763-3202188)
chr6 (166-252)||(696596-696682)
chr6 (171-252)||(31624089-31624170)
chr6 (174-245)||(4420645-4420716)
chr6 (183-253)||(2455821-2455891)
chr6 (165-246)||(3155169-3155249)
chr6 (213-253)||(3775117-3775157)
chr6 (185-233)||(31813174-31813222)
chr6 (162-233)||(2735059-2735130)
chr6 (182-253)||(34939754-34939825)
chr6 (165-246)||(281844-281925)
chr6 (212-253)||(2034435-2034476)
chr6 (167-248)||(30784552-30784632)
chr6 (212-252)||(2027396-2027436)
chr6 (165-253)||(4246403-4246491)
chr6 (185-253)||(6014548-6014616)
chr6 (166-246)||(17770450-17770530)
chr6 (168-252)||(32171373-32171457)
[»] chr3 (23 HSPs)
chr3 (183-252)||(45541582-45541651)
chr3 (166-252)||(39723230-39723316)
chr3 (183-253)||(37273145-37273215)
chr3 (207-252)||(27290891-27290936)
chr3 (171-245)||(44488881-44488956)
chr3 (183-252)||(21367678-21367748)
chr3 (162-252)||(54837024-54837114)
chr3 (172-244)||(20669172-20669244)
chr3 (183-233)||(16790387-16790437)
chr3 (165-227)||(24887298-24887360)
chr3 (172-250)||(39602202-39602280)
chr3 (186-252)||(50952347-50952413)
chr3 (172-253)||(1217789-1217870)
chr3 (162-270)||(27294336-27294445)
chr3 (212-253)||(30923887-30923928)
chr3 (171-232)||(44747418-44747479)
chr3 (172-253)||(52412893-52412974)
chr3 (212-252)||(5391919-5391959)
chr3 (185-253)||(24603741-24603809)
chr3 (212-252)||(24624250-24624290)
chr3 (212-252)||(36101608-36101648)
chr3 (212-252)||(36139918-36139958)
chr3 (212-252)||(53762384-53762424)
[»] chr7 (20 HSPs)
chr7 (166-252)||(11048021-11048107)
chr7 (166-252)||(43219634-43219720)
chr7 (165-233)||(40688995-40689063)
chr7 (172-253)||(18749806-18749887)
chr7 (186-233)||(39280983-39281030)
chr7 (172-224)||(12792642-12792694)
chr7 (183-246)||(45078289-45078352)
chr7 (183-245)||(7244691-7244753)
chr7 (212-273)||(36598324-36598386)
chr7 (212-253)||(12834951-12834992)
chr7 (171-252)||(25130079-25130160)
chr7 (171-220)||(27548262-27548311)
chr7 (212-253)||(39539770-39539811)
chr7 (169-233)||(5947181-5947245)
chr7 (164-252)||(12110352-12110440)
chr7 (172-248)||(12792492-12792568)
chr7 (164-200)||(27700195-27700231)
chr7 (164-252)||(30535555-30535643)
chr7 (165-233)||(38010707-38010775)
chr7 (165-245)||(44151477-44151557)
[»] chr2 (29 HSPs)
chr2 (166-252)||(29316765-29316851)
chr2 (164-252)||(680495-680583)
chr2 (165-233)||(28039341-28039409)
chr2 (206-252)||(1647270-1647316)
chr2 (183-253)||(34652025-34652095)
chr2 (162-248)||(42419987-42420073)
chr2 (165-252)||(18066121-18066209)
chr2 (187-252)||(43456697-43456762)
chr2 (162-230)||(12464485-12464553)
chr2 (213-252)||(787373-787412)
chr2 (189-252)||(14451040-14451103)
chr2 (206-253)||(27237882-27237929)
chr2 (173-252)||(44438829-44438908)
chr2 (183-233)||(750681-750731)
chr2 (206-248)||(5781703-5781745)
chr2 (173-231)||(16398115-16398173)
chr2 (162-232)||(33319822-33319892)
chr2 (165-246)||(6227744-6227825)
chr2 (183-252)||(35379006-35379075)
chr2 (172-253)||(41851153-41851234)
chr2 (183-232)||(42457959-42458008)
chr2 (183-251)||(1939323-1939391)
chr2 (165-233)||(3235393-3235461)
chr2 (212-248)||(5826257-5826293)
chr2 (192-252)||(5902539-5902599)
chr2 (165-233)||(22681194-22681262)
chr2 (162-226)||(29628759-29628823)
chr2 (213-252)||(41293152-41293192)
chr2 (173-233)||(44443322-44443382)
[»] chr8 (19 HSPs)
chr8 (162-252)||(42215296-42215386)
chr8 (162-233)||(2482855-2482924)
chr8 (187-247)||(42597453-42597513)
chr8 (186-232)||(43504765-43504811)
chr8 (164-233)||(10114481-10114550)
chr8 (212-252)||(3254265-3254305)
chr8 (165-253)||(6509292-6509380)
chr8 (162-233)||(8062319-8062390)
chr8 (162-233)||(33714245-33714316)
chr8 (206-252)||(9835890-9835936)
chr8 (171-233)||(27028830-27028892)
chr8 (212-253)||(11569446-11569487)
chr8 (186-247)||(20672764-20672825)
chr8 (186-253)||(3536933-3537001)
chr8 (183-247)||(11795103-11795167)
chr8 (165-233)||(28769348-28769416)
chr8 (165-253)||(31705078-31705166)
chr8 (185-252)||(31716216-31716284)
chr8 (165-233)||(38874639-38874707)
[»] chr1 (26 HSPs)
chr1 (162-248)||(34290226-34290312)
chr1 (162-247)||(7136993-7137078)
chr1 (186-270)||(28689423-28689508)
chr1 (172-252)||(6292493-6292573)
chr1 (165-233)||(14629975-14630043)
chr1 (162-233)||(45975680-45975751)
chr1 (212-250)||(1565527-1565565)
chr1 (183-252)||(5591956-5592025)
chr1 (183-248)||(12564493-12564558)
chr1 (172-253)||(27140478-27140559)
chr1 (165-233)||(9656643-9656711)
chr1 (212-252)||(28837035-28837075)
chr1 (166-233)||(2294905-2294972)
chr1 (206-253)||(26184782-26184829)
chr1 (165-252)||(31517730-31517817)
chr1 (185-252)||(35925703-35925770)
chr1 (175-252)||(4768819-4768896)
chr1 (165-226)||(6102147-6102208)
chr1 (162-227)||(7472301-7472366)
chr1 (164-268)||(10199381-10199486)
chr1 (171-252)||(10744300-10744381)
chr1 (212-253)||(37591471-37591512)
chr1 (212-252)||(4202141-4202181)
chr1 (212-252)||(10854773-10854813)
chr1 (212-252)||(11639406-11639446)
chr1 (165-253)||(24502817-24502905)
[»] chr5 (23 HSPs)
chr5 (173-233)||(4014433-4014493)
chr5 (168-252)||(28413274-28413358)
chr5 (183-273)||(37611183-37611274)
chr5 (183-273)||(37787913-37788004)
chr5 (206-252)||(1899188-1899234)
chr5 (171-233)||(7984968-7985030)
chr5 (164-252)||(39105456-39105545)
chr5 (172-253)||(41957440-41957521)
chr5 (165-233)||(12975340-12975407)
chr5 (165-253)||(32172646-32172734)
chr5 (186-253)||(2092374-2092441)
chr5 (165-252)||(4619700-4619787)
chr5 (162-233)||(9106811-9106882)
chr5 (162-252)||(17368666-17368756)
chr5 (206-248)||(38728436-38728478)
chr5 (173-253)||(9202736-9202817)
chr5 (212-273)||(14331407-14331468)
chr5 (172-233)||(34160731-34160792)
chr5 (183-252)||(40205064-40205133)
chr5 (164-252)||(6587097-6587185)
chr5 (164-232)||(12425563-12425631)
chr5 (212-248)||(17258877-17258913)
chr5 (183-231)||(36318785-36318833)
[»] scaffold0003 (1 HSPs)
scaffold0003 (214-253)||(306368-306407)
[»] chr4 (16 HSPs)
chr4 (183-252)||(488116-488185)
chr4 (165-273)||(50799998-50800106)
chr4 (183-246)||(825486-825549)
chr4 (162-273)||(7693979-7694090)
chr4 (206-253)||(29467613-29467660)
chr4 (163-246)||(42121479-42121561)
chr4 (183-253)||(4798555-4798625)
chr4 (185-231)||(14011247-14011293)
chr4 (165-231)||(51630104-51630170)
chr4 (183-252)||(2996584-2996653)
chr4 (183-252)||(23819100-23819169)
chr4 (206-243)||(45927383-45927420)
chr4 (162-231)||(55302239-55302308)
chr4 (212-248)||(41606226-41606262)
chr4 (212-248)||(51555751-51555787)
chr4 (173-253)||(52746829-52746909)
[»] scaffold0159 (1 HSPs)
scaffold0159 (206-248)||(27035-27077)
[»] scaffold0221 (1 HSPs)
scaffold0221 (162-231)||(22221-22290)
[»] scaffold0024 (1 HSPs)
scaffold0024 (165-253)||(27569-27657)


Alignment Details
Target: chr6 (Bit Score: 354; Significance: 0; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 417
Target Start/End: Complemental strand, 3202188 - 3201763
Alignment:
Q  1 attcagtacagattcatcacatcaaagtttatgtcataaataagcgaaaaactgattttcacaatttcatcttaaaagcttacttaaataaaattaaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  3202188 attcagtacagattcatcacatcaaagtttatgtcataaataagcgaaaaactgattttcacaagtttatcttaaaagcttacttaaataaaattaaaag 3202089  T
Q  101 ttacttatatgacatgcaggtcacaattcacaagctaaaaagttcataaagtacaaaagtcttgtataaactataagctatgttcataagctatcttgga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3202088 ttacttatatgacatgcaggtcacaattcacaagctaaaaagttcataaagtacaaaagtcttgtataaactataagctatgttcataagctatcttgga 3201989  T
Q  201 taacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttcgtgagttctctcaaacaatcataaa----------ttttatgcccgt 290  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||    
T  3201988 taacatatgggaataagctgaaaacaacttatgcgcatgtcataagctgtttcgtgagttctctcaaacaatcataaattttcataaattttatgcccgt 3201889  T
Q  291 nnnnnnnctcaaaataaccgatacaaacaagctctaaattaaaattttaattttccaatgtattcaaccttatagtttatcctccaaataaagggaaaca 390  Q
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3201888 -aaaaaactcaaaataaccgatacaaacaagctctaaattaaaattttaattttccaatgtattcaaccttatagtttatcctccaaataaagggaaaca 3201790  T
Q  391 aatcagaaaagtatttaacattaaaat 417  Q
    |||||||||||||||||||||||||||    
T  3201789 aatcagaaaagtatttaacattaaaat 3201763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 696596 - 696682
Alignment:
Q  166 ataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||| |||||| || |||  ||||||| ||| || |||| |||||||||||||||||||||||  |||||||||||||||||    
T  696596 ataaactattagctattttaatagcctatcttcgatgacttatgagaataagctgaaaacagcttatgaacatgtcataagctgttt 696682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 31624089 - 31624170
Alignment:
Q  171 ctataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||| | |||||| ||||||||||| ||  ||||  |||||| |||||||||||||||  |||||||||||||||||    
T  31624089 ctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttt 31624170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 4420645 - 4420716
Alignment:
Q  174 taagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataa 245  Q
    |||| ||| ||| |||||||||||||| | | ||||| ||||||||||||||||||||||  ||||||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataa 4420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 2455821 - 2455891
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||||||||||| | | ||||| |||||| |||||| || ||||| |||||||||||| ||||||    
T  2455821 ttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttc 2455891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 3155169 - 3155249
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataag 246  Q
    ||||| ||||||||||| |||||||| |||| |||| | | ||||| |||||||||||||||||||||   |||||||||||    
T  3155169 tataacctataagctattttcataagatatcctggagagc-tatggaaataagctgaaaacagcttatagacatgtcataag 3155249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 3775157 - 3775117
Alignment:
Q  213 ataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  3775157 ataagctgaaaacagtttatgcacatgtcataagctgtttc 3775117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 31813174 - 31813222
Alignment:
Q  185 cataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||||||||||| ||||||||  |||||||||||||| |||||||    
T  31813174 cataagctatcttggagaacatatgaaaataagctgaaaacggcttatg 31813222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 2735059 - 2735130
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||| ||||||||| | ||||||||| |||||| | ||| ||||  ||||||| ||||||||||||||    
T  2735059 ttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatg 2735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 34939754 - 34939825
Alignment:
Q  182 gttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||||||| |||| |   ||||| |||||||||||||||  |||||  ||||||||||||||||||    
T  34939754 gttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttc 34939825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 281925 - 281844
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataag 246  Q
    ||||| ||||||||| ||||||||||||||| | || | |  |||| ||||||||||||||| |||||   |||||||||||    
T  281925 tataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataag 281844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 2034476 - 2034435
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||||||||||||||||||||   |||||||||||||||||    
T  2034476 aataagctgaaaacagcttatggaaatgtcataagctgtttc 2034435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 30784552 - 30784632
Alignment:
Q  167 taaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    ||||||| |||| || |||||||| ||||||||| | | ||||| |||||||| |||||||||||||  ||| |||||||||    
T  30784552 taaactacaagccattttcataagttatcttggagacc-tatggaaataagctcaaaacagcttatggacatttcataagct 30784632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 2027436 - 2027396
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  2027436 aataagctgaaaacagcttatggaaatgtcataagctgttt 2027396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 4246403 - 4246491
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||| ||||||||| | ||||||||||||  |||| | |||||   |||||| |||||||||||||||  |||||||| || ||||||    
T  4246403 tataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatgagttgtttc 4246491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 6014548 - 6014616
Alignment:
Q  185 cataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||| ||||||| | ||| ||||| ||||| || |||||||||||||| | ||||||||| ||||||    
T  6014548 cataagttatcttgaagaacctatggaaataatctcaaaacagcttatgcacctgtcataagttgtttc 6014616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 17770530 - 17770450
Alignment:
Q  166 ataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataag 246  Q
    ||||||||| |||||| ||||||| ||||||| ||| || ||||  |||||| |||||| || |||||  |||||||||||    
T  17770530 ataaactattagctattttcataacctatctttgatgacttatgaaaataagttgaaaatagtttatgaacatgtcataag 17770450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 32171457 - 32171373
Alignment:
Q  168 aaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||| |||| | ||||| || |||| |||||| | ||||| ||||||||||||| ||||| ||  | |||||||||||||||    
T  32171457 aaactatgagctgttttcattagttatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttt 32171373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 45541582 - 45541651
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||  |||||||||||||||||    
T  45541582 ttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttt 45541651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 39723316 - 39723230
Alignment:
Q  166 ataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||| |||||| || |||  ||||||| ||| || |||| |||||||||||||||||||||||  |||||||||||||||||    
T  39723316 ataaactattagctattttaatagcctatcttcgatgacttatgagaataagctgaaaacagcttatgaacatgtcataagctgttt 39723230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 37273145 - 37273215
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||||||||||| ||| ||||| |||||| |||||||| ||||||  ||||||||||| ||||||    
T  37273145 ttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttc 37273215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 27290936 - 27290891
Alignment:
Q  207 atgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  27290936 atggaaataagctgaaaacagcttatgggcatgtcataagctgttt 27290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 44488881 - 44488956
Alignment:
Q  171 ctataagctatgtt-cataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataa 245  Q
    ||||||||||| || ||||||||||||| || ||| ||||| |||||||||||||| ||| ||| |||||||||||    
T  44488881 ctataagctatttttcataagctatcttagagaacttatggaaataagctgaaaaccgctcatgggcatgtcataa 44488956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 21367678 - 21367748
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgc-atgtcataagctgttt 252  Q
    |||||||||||||||||| ||| ||||  ||||||||||||||||||| ||  | ||||||||||||||||    
T  21367678 ttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttt 21367748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 54837114 - 54837024
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||| |||| ||| |||||||||||||||||| | | |||   ||||||| |||||||  |||||  |||||||||||||||||    
T  54837114 ttgtataaactgtaagttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataagctgttt 54837024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 20669172 - 20669244
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcata 244  Q
    |||||||| | |||||||||||||||||| | | ||||  ||||||| ||||||||||||||  |||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 16790437 - 16790387
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||||||||||||||| | ||||  ||||| ||||||||||||||||    
T  16790437 ttcataagctatcttggatagcttatgaaaataaactgaaaacagcttatg 16790387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 24887360 - 24887298
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacag 227  Q
    ||||| ||| ||||| | ||||||||||||| |||| | | ||||||||||||||||||||||    
T  24887360 tataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaacag 24887298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 39602280 - 39602202
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgt 250  Q
    |||||||| | ||||||||||||||| || ||| ||||  |||||| ||||||||  |||||  |||||||||||||||    
T  39602280 tataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgt 39602202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 50952347 - 50952413
Alignment:
Q  186 ataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||| |||||||||| | | ||||| |||||||| ||||||| |||||  |||||||||||||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttt 50952413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 1217870 - 1217789
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||| | ||||||||||||| | || ||| ||||  | |||| |||||||| ||||||  ||||||||||||||||||    
T  1217870 tataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttc 1217789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 27294336 - 27294445
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc-gtgagtt 260  Q
    |||||||| ||||||||| | ||||||| || || || | | |||| || |||||| ||||||||||||||| |||| |||| || ||||||  |||| |    
T  27294336 ttgtataagctataagctgttttcataaactgtcatgtagatcataaggaaataagatgaaaacagcttatgagcatatcatgagttgtttctatgagct 27294435  T
Q  261 ctctcaaaca 270  Q
    ||||||||||    
T  27294436 ctctcaaaca 27294445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 30923928 - 30923887
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  30923928 aataagctgaaaacagcttatagacatgtcataagctgtttc 30923887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 44747479 - 44747418
Alignment:
Q  171 ctataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttat 232  Q
    ||||||||| | |||||||||||||||||| ||| ||||  ||||||||||||  |||||||    
T  44747479 ctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaagaagcttat 44747418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 52412974 - 52412893
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||| |||||||| | || | || | ||||||| |||||||||||||||||||||   ||||||||| | ||||||    
T  52412974 tataagctattttcataagttgtcctagagagcatatggaaataagctgaaaacagcttataaacatgtcataggttgtttc 52412893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 5391919 - 5391959
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||| |||||||||||||||  |||||||||||||||||    
T  5391919 aataagttgaaaacagcttatgaacatgtcataagctgttt 5391959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 24603809 - 24603741
Alignment:
Q  185 cataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||| |||||||||  || ||||| ||||   ||||||||||||||| ||||||||||| |||||||    
T  24603809 cataagttatcttggaggacttatggaaatatcttgaaaacagcttatgggcatgtcataaactgtttc 24603741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 24624250 - 24624290
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||||||| |||||  |||||||||||||||||    
T  24624250 aataagctgaaaacagtttatggacatgtcataagctgttt 24624290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 36101608 - 36101648
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||||||||||| ||  |||||||||||||||||    
T  36101608 aataagctgaaaacagcttgtgaacatgtcataagctgttt 36101648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 36139918 - 36139958
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||||||||||| ||  |||||||||||||||||    
T  36139918 aataagctgaaaacagcttgtgaacatgtcataagctgttt 36139958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 53762424 - 53762384
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||| |||||||||||||||  |||||||||||||||||    
T  53762424 aataagttgaaaacagcttatgaacatgtcataagctgttt 53762384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 11048021 - 11048107
Alignment:
Q  166 ataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||| |||||| || ||| |||||||| ||| || |||| |||||||||||||||||||||||  ||||||||||| |||||    
T  11048021 ataaactattagctattttaataggctatcttcgatgacttatgagaataagctgaaaacagcttatgaacatgtcataagttgttt 11048107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 43219720 - 43219634
Alignment:
Q  166 ataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||| |||||| || |||  ||||||| ||| || |||| |||||||||||||||||||||||  |||||||||||||||||    
T  43219720 ataaactattagctattttaatagcctatcttcgatgacttatgagaataagctgaaaacagcttatgaacatgtcataagctgttt 43219634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 40689063 - 40688995
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| ||||||||| ||||||||||||||| |||||||| ||||  |||||||| |||||||||||||    
T  40689063 tataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatg 40688995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 18749887 - 18749806
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||| | |||||||||||||  ||| ||| ||||| |||||||||||||| |||||||  |||||| |||||||||||    
T  18749887 tataagctgttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacatgtcgtaagctgtttc 18749806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 39280983 - 39281030
Alignment:
Q  186 ataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  39280983 ataagctatcttggagaacatatggaaataagctgaaaacaacttatg 39281030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 12792694 - 12792642
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaa 224  Q
    |||||||||| |||||||||||||||| | | ||||||| |||||||||||||    
T  12792694 tataagctattttcataagctatcttgaagagcatatggaaataagctgaaaa 12792642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 45078289 - 45078352
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataag 246  Q
    |||||||||||||  ||||||| | ||| |||||| |||||||||||||||  |||||||||||    
T  45078289 ttcataagctatcacggataacttgtggaaataagttgaaaacagcttatggacatgtcataag 45078352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 7244691 - 7244753
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataa 245  Q
    |||||||||||| ||||| | | ||||  ||||||||||||||| |||||| |||||||||||    
T  7244691 ttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataa 7244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 36598386 - 36598324
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt-cgtgagttctctcaaacaatc 273  Q
    ||||||||||||||||||||||  ||||||||||| ||||| | | || ||||||||||||||    
T  36598386 aataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatc 36598324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 12834992 - 12834951
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||||||||| |||||  ||||||||||||||||||    
T  12834992 aataagctgaaaacagtttatggacatgtcataagctgtttc 12834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 25130160 - 25130079
Alignment:
Q  171 ctataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||| | |||| ||||||||||||| ||  | ||  |||| |||||||||||||||||  |||||||||| ||||||    
T  25130160 ctataagctgttttcaaaagctatcttggaaaatttctgaaaatatgctgaaaacagcttatgaacatgtcataaactgttt 25130079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 27548262 - 27548311
Alignment:
Q  171 ctataagctatgttcataagctatcttggataacatatgggaataagctg 220  Q
    ||||||||| | |||||||||||||||||||||| |||||  ||||||||    
T  27548262 ctataagctgttttcataagctatcttggataacttatggagataagctg 27548311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 39539811 - 39539770
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||||||||||||||||||||  ||||||||||| ||||||    
T  39539811 aataagctgaaaacagcttatggacatgtcataagttgtttc 39539770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 5947181 - 5947245
Alignment:
Q  169 aactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||||||||| | |||||||||||||| ||| ||  ||||  ||||||||||||| ||||||||    
T  5947181 aactataagctgtattcataagctatctaggagaagttatgaaaataagctgaaaagagcttatg 5947245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 12110352 - 12110440
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||| ||||||||| | |||||||||||||||| | ||| ||||  ||||| || ||||||| || ||  ||||||||||| |||||    
T  12110352 gtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataagttgttt 12110440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 12792568 - 12792492
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    |||||||||| |||||||||||||||| | | | ||| | |||||||||| ||||| ||||| |||| | |||||||    
T  12792568 tataagctattttcataagctatcttgaagagcttattgaaataagctgataacagtttatgagcatattataagct 12792492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 27700231 - 27700195
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttgga 200  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  27700231 gtataaactataagctattttcataagctatcatgga 27700195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 30535555 - 30535643
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||| ||||||||| | | |||||||||||||  | ||||||||  ||||| |||||||||||||| |  ||| ||||||| |||||    
T  30535555 gtataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatcataagttgttt 30535643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 38010707 - 38010775
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| ||||||||| | ||||||| ||||| | || ||| ||||| |||||||| |||||||||||||    
T  38010707 tataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatg 38010775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 44151557 - 44151477
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataa 245  Q
    ||||| ||||||| | | ||||||| |||||||| | | | ||||| ||||||||||||||| ||||||  ||||||||||    
T  44151557 tataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 29316851 - 29316765
Alignment:
Q  166 ataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||| ||||||||| | ||||| |||||||||||| ||| ||||| ||||||||||||| | ||||||  |||||||||||||||||    
T  29316851 ataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgttt 29316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 680495 - 680583
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||| ||||||||||| |||||||||||||||| | ||| | ||  |||||||||||||||| ||||   |||||||||||||||||    
T  680495 gtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgttt 680583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 28039409 - 28039341
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||||||||| || |||||||||| ||||||| ||  ||||| ||||||||||||||||||||||    
T  28039409 tataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatg 28039341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 1647270 - 1647316
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  1647270 tatggaaataagctgaaaacagcttatgagcatgtcataagctgttt 1647316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 34652095 - 34652025
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||||||||||| | | ||||| |||||| |||||||||||||||  ||||||||||| ||||||    
T  34652095 ttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttc 34652025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 42419987 - 42420073
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    |||||||| ||||||||||| ||||||||||||| |||||| | ||||| ||| |||||||||||  |||||  |||| ||||||||    
T  42419987 ttgtataatctataagctattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacataagct 42420073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 18066121 - 18066209
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgc-atgtcataagctgttt 252  Q
    ||||| ||||||||| | |||||||||||||||||| ||| || |  |||||| |||||| |||||||| || ||||||||||||||||    
T  18066121 tataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctgttt 18066209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 43456762 - 43456697
Alignment:
Q  187 taagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||| | ||||||||| |||||||||||||||| |||||  |||||||| || |||||    
T  43456762 taagctatcttgaaaaacatatggaaataagctgaaaacagtttatggacatgtcatgagttgttt 43456697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 12464553 - 12464485
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagctt 230  Q
    |||||||  ||||||||||| |||||||||||||||||| ||| | ||  ||||||||||||| |||||    
T  12464553 ttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagctt 12464485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 787373 - 787412
Alignment:
Q  213 ataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  787373 ataagctgaaaacagcttatggacatgtcataagctgttt 787412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 14451103 - 14451040
Alignment:
Q  189 agctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||| ||||||||| | | ||| ||||||||||||||||||||||  ||||||||||| |||||    
T  14451103 agctgtcttggatagcttgtggaaataagctgaaaacagcttatggtcatgtcataagttgttt 14451040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 27237929 - 27237882
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||| |||||||| |||||||||||||  ||||||||||||||||||    
T  27237929 tatggaaataagctaaaaacagcttatgtacatgtcataagctgtttc 27237882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 44438908 - 44438829
Alignment:
Q  173 ataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||| | |||||||| |||| |||| | | | ||| |||||||||||||||| |||||  |||||||||||||||||    
T  44438908 ataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaacatgtcataagctgttt 44438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 750681 - 750731
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||||||||||||| ||| ||||  |||||||| |||||||||||||    
T  750681 ttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatg 750731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 5781703 - 5781745
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    ||||| |||||||||||||||| |||||| |||||||||||||    
T  5781703 tatggaaataagctgaaaacagtttatgcacatgtcataagct 5781745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 16398115 - 16398173
Alignment:
Q  173 ataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagctta 231  Q
    ||||||||| |||||||| ||| ||||| ||| ||||  ||||||||||||||||||||    
T  16398115 ataagctattttcataagttatgttggagaacttatgaaaataagctgaaaacagctta 16398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 33319892 - 33319822
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttat 232  Q
    ||||||| ||||||| || | ||||||| |||||||||| ||| ||||  ||||||||||||| |||||||    
T  33319892 ttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 33319822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 6227744 - 6227825
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataag 246  Q
    |||||||||||||   | |||||||||||| ||||| | | ||||| || |||||||||||| ||||| | |||||||||||    
T  6227744 tataaactataagtggttttcataagctattttggagagcttatggtaacaagctgaaaacaacttatactcatgtcataag 6227825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 35379075 - 35379006
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||||||||| | | ||||  ||||||||||||||| ||||||  || ||||| ||||||||    
T  35379075 ttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttt 35379006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 41851234 - 41851153
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||| ||| || ||| ||||||||||||||| |||||  ||||  ||||| | |||||||  ||||||||||||||||||    
T  41851234 tataagttatttttatatgctatcttggataacttatggagataaagtgaaatcggcttatggacatgtcataagctgtttc 41851153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 42457959 - 42458008
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttat 232  Q
    ||||||||||||||| || ||||||||  ||||||||||||||| |||||    
T  42457959 ttcataagctatcttagagaacatatgaaaataagctgaaaacaacttat 42458008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 1939391 - 1939323
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtt 251  Q
    ||||||||||||  |||| | | ||||| |||||| |||||||||||||||  ||||||||||| ||||    
T  1939391 ttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 3235461 - 3235393
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||||||||||||| | ||||||  |||||||| | |   ||||| ||||||||||||||||||||||    
T  3235461 tataaactataagctgttttcatatactatcttgaaaagtttatggaaataagctgaaaacagcttatg 3235393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 5826257 - 5826293
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    |||||||||||||||| |||||| |||||||||||||    
T  5826257 aataagctgaaaacagtttatgcacatgtcataagct 5826293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 5902599 - 5902539
Alignment:
Q  192 tatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||| |||||||   || ||||||||||||| |||||  |||||||||||||||||    
T  5902599 tatcttggagaacatataaaaacaagctgaaaacagtttatgaacatgtcataagctgttt 5902539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 22681262 - 22681194
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| ||||||||| | ||||||| ||||| | || ||| ||||| |||||||| |||||||||||||    
T  22681262 tataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatg 22681194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 29628823 - 29628759
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaaca 226  Q
    |||||||| ||||||| | |  ||||||||||||||||| ||  ||||| |||||||||||||||    
T  29628823 ttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaaca 29628759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 41293192 - 41293152
Alignment:
Q  213 ataagctgaaaacagcttatgcg-catgtcataagctgttt 252  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  41293192 ataagctgaaaacagcttatgcgaaatgtcataagctgttt 41293152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 44443322 - 44443382
Alignment:
Q  173 ataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||| |||| ||||||||||||||| || | ||||||  ||||||||||||||| ||||||    
T  44443322 ataatctattttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatg 44443382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 42215386 - 42215296
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||| |||||| |||| |||||| |||||| |||| | | ||||  ||||||||||||||||||||||  || ||||||||||||||    
T  42215386 ttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttt 42215296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 2482855 - 2482924
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||| ||||||||| | |||||  ||||||||||||||| ||| | ||||||||||||||||||||||    
T  2482855 ttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttatg 2482924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 42597453 - 42597513
Alignment:
Q  187 taagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagc 247  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||   ||||||||||||    
T  42597453 taagctatcttggataacttatggaaataagttgaaaacagcttatagacatgtcataagc 42597513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 43504765 - 43504811
Alignment:
Q  186 ataagctatcttggataacatatgggaataagctgaaaacagcttat 232  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  43504765 ataagctatcttggagaacttatggaaataagctgaaaacagcttat 43504811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 10114481 - 10114550
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||| ||||||||| | ||||| |||||| ||||| ||||||||  ||||||||||||||||| ||||    
T  10114481 gtataagctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacagcatatg 10114550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 3254265 - 3254305
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  3254265 aataagctgaaaacagcttatgaacatgtcataagctgttt 3254305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 6509380 - 6509292
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||| ||||||||| | ||||||||||||| |||| | | ||| | |||||| |||||| || ||||  |||||||||||||||||||    
T  6509380 tataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttc 6509292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 8062319 - 8062390
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||| ||||||||| | ||||||||||||||| || |   ||||| ||||||||||||||| ||||||    
T  8062319 ttgtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatg 8062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 33714316 - 33714245
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| || ||||||||||| |||||||||||||| ||| | | |||   ||||||||||||||||||||||    
T  33714316 ttgtacaatctataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatg 33714245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 9835936 - 9835890
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||| |||||| |||||||||||||||  |||||||||||||||||    
T  9835936 tatggaaataagatgaaaacagcttatgaacatgtcataagctgttt 9835890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 27028830 - 27028892
Alignment:
Q  171 ctataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||||||| | |||||||||||||||||| | | ||||  ||||||||||||| ||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatg 27028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 11569487 - 11569446
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||||||||||||| ||||||  ||||||||||||||||||    
T  11569487 aataagctgaaaacaacttatgtacatgtcataagctgtttc 11569446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 20672764 - 20672825
Alignment:
Q  186 ataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagc 247  Q
    |||||||||| |||| | | ||||  ||||||||||||||||||||||  ||||||||||||    
T  20672764 ataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagc 20672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 3537001 - 3536933
Alignment:
Q  186 ataagctatcttggataacatatgggaataagctgaaaacagcttatgcgc-atgtcataagctgtttc 253  Q
    ||||| ||||||||| ||| ||||| |||||||||||||||  |||||  | |||||||||||||||||    
T  3537001 ataagatatcttggagaacttatggaaataagctgaaaacaatttatgaacaatgtcataagctgtttc 3536933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 11795103 - 11795167
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagc 247  Q
    ||||||||||||  |||| | | ||||| |||||||||||||||| |||||  ||||||||||||    
T  11795103 ttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataagc 11795167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 28769416 - 28769348
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| ||||||||| | |||||||||||| ||||| |   ||||| ||||||||||||||| ||||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatg 28769348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 31705078 - 31705166
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||| ||||||||| | |||||||||| || | || |   ||||| ||||||||||||||||||||||| ||| || |||||| ||||    
T  31705078 tataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatgcacatctcttaagctatttc 31705166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 31716284 - 31716216
Alignment:
Q  185 cataagctatcttggataacatatgggaataagctgaaaacagcttatg-cgcatgtcataagctgttt 252  Q
    |||||||||||||||| ||  ||| | ||||||||||||| ||||||||  | ||||||||||||||||    
T  31716284 cataagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttt 31716216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 38874639 - 38874707
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| || |||||| | |||||||||||| ||||| ||||||||  |||||||| |||| ||||||||    
T  38874639 tataagctctaagctgttttcataagctattttggagaacatatgaaaataagctaaaaatagcttatg 38874707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 34290226 - 34290312
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    |||||||| ||||||||| | |||||||||||||||| | ||| ||||  ||||||||||||||| ||||||   ||||||||||||    
T  34290226 ttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagct 34290312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 7137078 - 7136993
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagc 247  Q
    |||||||| ||||||||| | |||||||||||||||||| ||| ||||  ||||||||||||| | ||||||   |||||||||||    
T  7137078 ttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagc 7136993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 28689508 - 28689423
Alignment:
Q  186 ataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt-cgtgagttctctcaaaca 270  Q
    ||||||||||||||| | | ||||  ||||||||||||||| ||||||  ||||||||||||||||| ||| |||||||| |||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagttctctaaaaca 28689423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 6292493 - 6292573
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||| ||| ||| |||| ||||| | | ||||  ||||||||||||||||||||||  |||||||||||||||||    
T  6292493 tataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttt 6292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 14630043 - 14629975
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| ||||||||||| |||||||||||||||||| |   ||||| ||||||||||||||| ||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatg 14629975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 45975680 - 45975751
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||| ||| ||||| | |||||||||||||||||| ||  ||||  ||||||||||||||||||||||    
T  45975680 ttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 45975751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 250
Target Start/End: Complemental strand, 1565565 - 1565527
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgt 250  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1565565 aataagctgaaaacagcttatgcacatgtcataagctgt 1565527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 5592025 - 5591956
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||| |||||| |||||| ||||| |||||  ||||||| |||||||| | |||||||||||||||    
T  5592025 ttcataagatatcttagataacttatggaaataaattgaaaacggcttatgcacgtgtcataagctgttt 5591956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 12564558 - 12564493
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||| |||||   | |||||||||||    
T  12564558 ttcataagctatcttggagaacttatggaaataagctgaaaacaacttattgacttgtcataagct 12564493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 27140478 - 27140559
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||| | || |||||||||| |||| | | ||||  ||||||||||||||| ||||||  ||||||||||||||||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttc 27140559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 9656643 - 9656711
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| ||||||||| ||||||||||||||| ||||| |  ||||  |||||||| |||||||||||||    
T  9656643 tataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaacagcttatg 9656711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 28837075 - 28837035
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  28837075 aataagctgaaaacagcttatgtgcatgtcattagctgttt 28837035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 2294905 - 2294972
Alignment:
Q  166 ataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||| ||||||||||| ||||||| |||||||||| ||| || |  |||||| |||||||||||||||    
T  2294905 ataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttatg 2294972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 26184782 - 26184829
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||| ||||| ||||||||||||||||  ||||||||||||||||||    
T  26184782 tatggaaataatctgaaaacagcttatggacatgtcataagctgtttc 26184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 31517817 - 31517730
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||| ||||||||| | ||||||| || ||||||| | | ||||  ||||||||||||||||||||||  |||||||| || |||||    
T  31517817 tataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttt 31517730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 35925703 - 35925770
Alignment:
Q  185 cataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||| |||| |   ||||| |||||| |||||||||||||||  |||||||||||||||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttt 35925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 4768896 - 4768819
Alignment:
Q  175 aagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||| |||||| | ||||||||| ||  ||||| |||||||||||||||  |||||  |||||| ||||||||||    
T  4768896 aagctattttcatatgatatcttggagaatttatggaaataagctgaaaacaagttatggacatgtcgtaagctgttt 4768819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 6102147 - 6102208
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaaca 226  Q
    |||| |||||||||| | |||||||||||||| ||| ||  ||||| |||||||||||||||    
T  6102147 tatacactataagctgttttcataagctatctgggagaatttatggaaataagctgaaaaca 6102208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 7472301 - 7472366
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacag 227  Q
    |||||||| ||||||||| | | |||||||||||||||| | | ||||  ||||||||||||||||    
T  7472301 ttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaacag 7472366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 10199486 - 10199381
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagct-gtttcgtgagttct 262  Q
    |||||| | ||||||| | |||||||||||| || || | | ||||  ||||||||||||||| ||||||  |||||||||||||  |||| ||||||||    
T  10199486 gtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttct 10199387  T
Q  263 ctcaaa 268  Q
    | ||||    
T  10199386 cccaaa 10199381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 10744300 - 10744381
Alignment:
Q  171 ctataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||| | |||||||||| |||| || ||| |||   |||||| |||||||||||||||  |||| ||||||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttt 10744381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 37591471 - 37591512
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||||||||||| |||||||| || ||||||||||||||||    
T  37591471 aataagctgaaaagagcttatgagcctgtcataagctgtttc 37591512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 4202181 - 4202141
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||||| ||||||||  |||||||||||||||||    
T  4202181 aataagctgaaaatagcttatggacatgtcataagctgttt 4202141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 10854773 - 10854813
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||||||||||| ||  |||||||||||||||||    
T  10854773 aataagctgaaaacagcttgtgaacatgtcataagctgttt 10854813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 11639446 - 11639406
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||| |||||||||||||  |||||||||||||||||    
T  11639446 aataagctaaaaacagcttatggacatgtcataagctgttt 11639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 24502905 - 24502817
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||| |||||||||| ||| ||||||| || | ||||| || || |||||||||||||||  ||||   ||||||||||| ||||||    
T  24502905 tataaattataagctattttcttaagctacctggaataacttacggaaataagctgaaaacaaattattgacatgtcataagttgtttc 24502817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 4014493 - 4014433
Alignment:
Q  173 ataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||||| | |||||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 28413358 - 28413274
Alignment:
Q  168 aaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||| ||| |||||||||| ||||||||| |   ||||| ||||||||||||||||||||||  |||  ||||||||||||    
T  28413358 aaactatacgctgtgttcataagttatcttggagagtttatggaaataagctgaaaacagcttatgaacattccataagctgttt 28413274  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 37611274 - 37611183
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctg-tttcgtgagttctctcaaacaatc 273  Q
    |||||||||||||||||| | | ||||| ||||| ||||||||||||||||  ||||||| ||| || |||| | || ||||||||||||||    
T  37611274 ttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatc 37611183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 37788004 - 37787913
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctg-tttcgtgagttctctcaaacaatc 273  Q
    |||||||||||||||||| | | ||||| ||||| ||||||||||||||||  ||||||| ||| || |||| | || ||||||||||||||    
T  37788004 ttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatc 37787913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 1899188 - 1899234
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  1899188 tatggaaataagctgaaaacaacttatgcacatgtcataagctgttt 1899234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 7984968 - 7985030
Alignment:
Q  171 ctataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||||||| | |||||||||||||||||| ||  ||||  ||||||||||||||||||||||    
T  7984968 ctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 39105456 - 39105545
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgc-atgtcataagctgttt 252  Q
    |||||| |||||| || | |||||||||||||||||| ||| ||||  |||||||| |||| ||||||||  | ||||||||||||||||    
T  39105456 gtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttt 39105545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 41957521 - 41957440
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||| | ||||||||||||| | || ||| ||||  |||||| |||||||| ||||||  ||||||||||||||||||    
T  41957521 tataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttc 41957440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 12975340 - 12975407
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    ||||| ||||||||| |||||||||||||||||||| | | ||| |||||||| |||||||| ||||||    
T  12975340 tataagctataagctgtgttcataagctatcttggagagcttat-ggaataagttgaaaacaacttatg 12975407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 32172646 - 32172734
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||| ||||||||| | ||||||||||||| || | |||  |||| |||||||||||||  |||||||  ||||||||||| ||||||    
T  32172646 tataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgtttc 32172734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 2092374 - 2092441
Alignment:
Q  186 ataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||||||||||||| ||| ||||| || ||||  |||||||||||||  ||||||||||||| ||||    
T  2092374 ataagctatcttggaaaacttatggtaaaaagcaaaaaacagcttatggacatgtcataagctatttc 2092441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 4619700 - 4619787
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||| |||||| || | ||||||||||||| |||| ||| ||||| |||||| ||||| |||||||||  |||||||| || |||||    
T  4619700 tataatctataaactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttt 4619787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 9106811 - 9106882
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||| ||||||||||| |||||||| |||| ||   | | ||||| ||||||||||||||||||||||    
T  9106811 ttgtataatctataagctattttcataagttatcctgctaagcttatggaaataagctgaaaacagcttatg 9106882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 17368666 - 17368756
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||| ||| ||||||| | | |||||||||||||||||| |   ||||| |||||||||||||| || ||||  ||||||||||| |||||    
T  17368666 ttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttt 17368756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 38728436 - 38728478
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    ||||| |||||||||||||||||||| | ||||||||||||||    
T  38728436 tatggaaataagctgaaaacagcttaggagcatgtcataagct 38728478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 9202817 - 9202736
Alignment:
Q  173 ataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgc-atgtcataagctgtttc 253  Q
    ||||||| | |||||||| ||||||| | ||| ||||  ||||||||| ||||||||||||  | |||||||||||||||||    
T  9202817 ataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttc 9202736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 14331407 - 14331468
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagctgtttcgtgagttctctcaaacaatc 273  Q
    |||||||||||| |||||||||  ||||||||||||||||| || |||| |  |||||||||    
T  14331407 aataagctgaaatcagcttatggacatgtcataagctgttttgtaagtttttccaaacaatc 14331468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 34160731 - 34160792
Alignment:
Q  172 tataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatg 233  Q
    |||||||||| ||||| || ||||||||| ||| ||||  |||||||||||||||| |||||    
T  34160731 tataagctattttcattagatatcttggagaacttatgaaaataagctgaaaacagtttatg 34160792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 40205133 - 40205064
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    ||||||||||||| |||| | | ||| | |||||||||||||||| |||||  ||||| |||||||||||    
T  40205133 ttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataagctgttt 40205064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 6587185 - 6587097
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||| ||||||| | | ||||||||||||  |||| ||| | ||  ||||||||| ||||||||||||  | |||||||||||||||    
T  6587185 gtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctgttt 6587097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 12425563 - 12425631
Alignment:
Q  164 gtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttat 232  Q
    |||||| ||||||||| | |||| ||||||||||||| ||| ||||  |||||| |||||||| |||||    
T  12425563 gtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttat 12425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 17258913 - 17258877
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    ||||||||||||||||||||||  |||||||||||||    
T  17258913 aataagctgaaaacagcttatgaacatgtcataagct 17258877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 36318785 - 36318833
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagctta 231  Q
    |||||||||||||||||| ||  ||||  ||||||||||||||||||||    
T  36318785 ttcataagctatcttggagaatttatgtaaataagctgaaaacagctta 36318833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 306368 - 306407
Alignment:
Q  214 taagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  306368 taagctgaaaacagcttatgggcatgtcataagctgtttc 306407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 488185 - 488116
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||||||||| ||  || |  |||||| |||||||||||||||| ||||||||||| |||||    
T  488185 ttcataagctatcttggagaatttacgtaaataagatgaaaacagcttatgcacatgtcataagttgttt 488116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 273
Target Start/End: Complemental strand, 50800106 - 50799998
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt-cgtgagttctc 263  Q
    ||||| ||||||||| | ||| ||||||||| |||| ||| | ||| |||||||||||||||||||||   ||||||||||| ||||| | | |||||||    
T  50800106 tataagctataagctgttttcttaagctatcatggagaactt-tggaaataagctgaaaacagcttatagacatgtcataagttgtttacattagttctc 50800008  T
Q  264 tcaaacaatc 273  Q
     |||||||||    
T  50800007 ccaaacaatc 50799998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 825549 - 825486
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataag 246  Q
    |||||||||||| ||||| ||| ||||  |||||||||||||||| | ||| ||||||||||||    
T  825549 ttcataagctattttggagaacttatgaaaataagctgaaaacagttaatgagcatgtcataag 825486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 273
Target Start/End: Complemental strand, 7694090 - 7693979
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttcgtgagttc 261  Q
    |||||||| ||||||||| | |||||||| |||| |||| |   ||||| ||||||||||||||| ||||||  |||||||| | || |||| | ||||     
T  7694090 ttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcattaactatttcataagttt 7693991  T
Q  262 tctcaaacaatc 273  Q
    || |||||||||    
T  7693990 tcacaaacaatc 7693979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 29467660 - 29467613
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||| ||||||||||||||||||||||  |||||||||||| |||||    
T  29467660 tatggaaataagctgaaaacagcttatggacatgtcataagccgtttc 29467613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 42121479 - 42121561
Alignment:
Q  163 tgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataag 246  Q
    ||||||| ||||||| | | ||||| |||||||||||| ||| | ||| ||||||||| ||||||||||||  |||||||||||    
T  42121479 tgtataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctg-aaacagcttatgaacatgtcataag 42121561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 4798625 - 4798555
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    |||||||||||||||||| | | ||||  |||||||| |||||||||||||  ||||||| |||| |||||    
T  4798625 ttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtcagaagccgtttc 4798555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 14011247 - 14011293
Alignment:
Q  185 cataagctatcttggataacatatgggaataagctgaaaacagctta 231  Q
    |||||||||||||||| | | ||||| ||||||||||||||||||||    
T  14011247 cataagctatcttggagagcttatggaaataagctgaaaacagctta 14011293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 51630104 - 51630170
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagctta 231  Q
    ||||| ||||||||||| |||||||||||||||| | ||  ||||  ||||||||||||||| ||||    
T  51630104 tataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaacatctta 51630170  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 2996584 - 2996653
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||||||||| | | ||||  |||||| |||||| ||||||||  ||||||||||| |||||    
T  2996584 ttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttt 2996653  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 23819100 - 23819169
Alignment:
Q  183 ttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgttt 252  Q
    |||||||||||||||| | | | ||| | |||||| |||||||| ||||||  |||||||||||||||||    
T  23819100 ttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttt 23819169  T

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Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 45927383 - 45927420
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcat 243  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  45927383 tatggaaataagctgaaaacagcttatgcgtatgtcat 45927420  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 55302239 - 55302308
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagctta 231  Q
    ||||||| |||||||||| |  ||||||||||| ||||| ||| ||||  ||||||||||||| ||||||    
T  55302239 ttgtatatactataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagctta 55302308  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 41606226 - 41606262
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  41606226 aataagctgaaaatagcttatgcacatgtcataagct 41606262  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 51555787 - 51555751
Alignment:
Q  212 aataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  51555787 aataagttgaaaacagcttatgggcatgtcataagct 51555751  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 52746909 - 52746829
Alignment:
Q  173 ataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||||| | |||||||||||||||| |   | ||||  ||| ||||||||||||||||||  |||||| |||||||||||    
T  52746909 ataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgtcttaagctgtttc 52746829  T

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Target: scaffold0159 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 27035 - 27077
Alignment:
Q  206 tatgggaataagctgaaaacagcttatgcgcatgtcataagct 248  Q
    ||||| |||||||||||||||| |||||| |||||||||||||    
T  27035 tatggaaataagctgaaaacagtttatgcacatgtcataagct 27077  T

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Target: scaffold0221 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 22221 - 22290
Alignment:
Q  162 ttgtataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagctta 231  Q
    ||||||| |||||||||| |  ||||||||||| ||||| ||| ||||  ||||||||||||| ||||||    
T  22221 ttgtatatactataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagctta 22290  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 27569 - 27657
Alignment:
Q  165 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacagcttatgcgcatgtcataagctgtttc 253  Q
    ||||||||||||| | | ||||||| |||||||||  | | | ||| ||||||||||||||| |||||   ||||||||||||| ||||    
T  27569 tataaactataagttgttttcataaactatcttggtaagcgtgtggaaataagctgaaaacaacttatagccatgtcataagctatttc 27657  T

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