View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15669_high_10 (Length: 310)

Name: NF15669_high_10
Description: NF15669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15669_high_10
NF15669_high_10
[»] chr8 (32 HSPs)
chr8 (209-298)||(10660160-10660249)
chr8 (20-83)||(31685918-31685981)
chr8 (20-135)||(13405695-13405810)
chr8 (20-135)||(3272967-3273082)
chr8 (20-135)||(9180292-9180407)
chr8 (20-135)||(6943904-6944019)
chr8 (21-135)||(26479347-26479460)
chr8 (20-133)||(13154486-13154599)
chr8 (20-71)||(24332509-24332560)
chr8 (20-83)||(26479541-26479604)
chr8 (21-134)||(2835342-2835454)
chr8 (20-83)||(6891851-6891914)
chr8 (20-83)||(6943730-6943793)
chr8 (20-83)||(18764532-18764595)
chr8 (20-83)||(31186620-31186683)
chr8 (20-135)||(18764306-18764421)
chr8 (20-83)||(220585-220648)
chr8 (20-83)||(689740-689803)
chr8 (20-83)||(734208-734271)
chr8 (20-83)||(858104-858167)
chr8 (20-83)||(13154312-13154375)
chr8 (20-83)||(24332335-24332398)
chr8 (20-83)||(31403160-31403223)
chr8 (20-75)||(31685751-31685806)
chr8 (20-64)||(37586110-37586154)
chr8 (20-83)||(31402986-31403049)
chr8 (20-72)||(2835209-2835261)
chr8 (20-60)||(3272816-3272856)
chr8 (20-60)||(6892025-6892065)
chr8 (31-83)||(31186447-31186499)
chr8 (20-83)||(20112663-20112726)
chr8 (20-61)||(37586264-37586305)
[»] scaffold0817 (2 HSPs)
scaffold0817 (20-135)||(4229-4344)
scaffold0817 (20-83)||(4056-4119)
[»] chr6 (31 HSPs)
chr6 (20-135)||(30608887-30609002)
chr6 (20-135)||(17238281-17238396)
chr6 (20-133)||(28853732-28853845)
chr6 (20-138)||(9571643-9571761)
chr6 (20-83)||(5404817-5404880)
chr6 (20-135)||(5924074-5924190)
chr6 (20-132)||(26272227-26272339)
chr6 (20-135)||(3485021-3485136)
chr6 (20-132)||(8926434-8926548)
chr6 (20-132)||(8936691-8936805)
chr6 (20-135)||(19661371-19661485)
chr6 (20-83)||(31717422-31717485)
chr6 (20-83)||(3345093-3345156)
chr6 (20-83)||(3345266-3345329)
chr6 (20-83)||(16525440-16525503)
chr6 (20-74)||(29819633-29819687)
chr6 (20-83)||(19661596-19661659)
chr6 (20-83)||(29819459-29819522)
chr6 (20-83)||(33783644-33783707)
chr6 (20-135)||(31717196-31717311)
chr6 (20-83)||(3484857-3484920)
chr6 (20-83)||(5923900-5923963)
chr6 (20-83)||(8926260-8926323)
chr6 (20-83)||(8936517-8936580)
chr6 (20-75)||(30609113-30609168)
chr6 (20-75)||(33783478-33783533)
chr6 (20-73)||(17238117-17238170)
chr6 (20-83)||(16525266-16525329)
chr6 (20-83)||(28853558-28853621)
chr6 (20-60)||(5404666-5404706)
chr6 (48-83)||(5409170-5409205)
[»] scaffold0103 (2 HSPs)
scaffold0103 (20-135)||(43298-43413)
scaffold0103 (20-83)||(43525-43588)
[»] chr2 (48 HSPs)
chr2 (20-135)||(18369034-18369149)
chr2 (20-135)||(29683421-29683536)
chr2 (20-138)||(14379131-14379249)
chr2 (20-135)||(28921440-28921555)
chr2 (20-83)||(7877397-7877460)
chr2 (20-135)||(10748515-10748630)
chr2 (20-135)||(12806796-12806911)
chr2 (20-135)||(17457739-17457854)
chr2 (20-135)||(41593972-41594087)
chr2 (20-83)||(3371549-3371612)
chr2 (20-83)||(3948437-3948500)
chr2 (20-83)||(33940754-33940817)
chr2 (20-135)||(41594198-41594313)
chr2 (20-76)||(6163978-6164034)
chr2 (20-83)||(6880046-6880109)
chr2 (20-83)||(19204839-19204902)
chr2 (20-75)||(37609037-37609092)
chr2 (20-135)||(2395404-2395519)
chr2 (20-135)||(4171772-4171887)
chr2 (20-77)||(32521722-32521779)
chr2 (20-137)||(13572718-13572835)
chr2 (20-83)||(3371375-3371438)
chr2 (20-83)||(6164145-6164208)
chr2 (20-83)||(7877571-7877634)
chr2 (20-83)||(19204665-19204728)
chr2 (20-75)||(42705199-42705254)
chr2 (20-65)||(30432686-30432731)
chr2 (20-134)||(30432842-30432956)
chr2 (20-76)||(17457965-17458021)
chr2 (20-83)||(2395230-2395293)
chr2 (20-83)||(3948611-3948674)
chr2 (20-83)||(4171598-4171661)
chr2 (20-83)||(12806622-12806685)
chr2 (20-83)||(13572544-13572607)
chr2 (20-83)||(28921266-28921329)
chr2 (20-76)||(6880220-6880276)
chr2 (20-83)||(18369260-18369323)
chr2 (20-83)||(25318389-25318452)
chr2 (20-75)||(30771149-30771204)
chr2 (20-75)||(38873553-38873608)
chr2 (97-135)||(13278116-13278154)
chr2 (20-72)||(10748741-10748793)
chr2 (20-72)||(32521559-32521611)
chr2 (20-75)||(14379360-14379415)
chr2 (20-83)||(33940924-33940987)
chr2 (20-138)||(37609201-37609320)
chr2 (20-73)||(25318541-25318594)
chr2 (20-77)||(29683255-29683311)
[»] chr5 (32 HSPs)
chr5 (20-138)||(3598660-3598778)
chr5 (20-138)||(43196919-43197037)
chr5 (20-135)||(6497439-6497554)
chr5 (20-135)||(22394145-22394260)
chr5 (20-83)||(10461418-10461481)
chr5 (20-83)||(4122650-4122713)
chr5 (20-135)||(14868920-14869034)
chr5 (20-125)||(24491090-24491195)
chr5 (20-83)||(5933198-5933261)
chr5 (20-83)||(15969677-15969740)
chr5 (20-135)||(3598434-3598549)
chr5 (20-134)||(6542281-6542395)
chr5 (20-135)||(24490865-24490979)
chr5 (20-134)||(25329119-25329233)
chr5 (20-76)||(14868753-14868809)
chr5 (20-83)||(5933372-5933435)
chr5 (20-83)||(7133372-7133435)
chr5 (20-75)||(18786062-18786117)
chr5 (20-83)||(43197148-43197211)
chr5 (20-78)||(18786228-18786286)
chr5 (20-138)||(15969448-15969566)
chr5 (20-77)||(29991181-29991238)
chr5 (20-83)||(6497265-6497328)
chr5 (20-83)||(6542506-6542569)
chr5 (20-83)||(10461592-10461655)
chr5 (20-75)||(22394371-22394426)
chr5 (20-83)||(29991349-29991412)
chr5 (20-75)||(41137222-41137277)
chr5 (20-60)||(41137388-41137428)
chr5 (20-83)||(4122824-4122887)
chr5 (20-83)||(40588897-40588959)
chr5 (20-83)||(40589500-40589562)
[»] chr7 (31 HSPs)
chr7 (20-136)||(40729310-40729426)
chr7 (20-134)||(42517114-42517228)
chr7 (20-134)||(44483473-44483587)
chr7 (20-135)||(19157940-19158055)
chr7 (20-135)||(20757339-20757454)
chr7 (20-134)||(24378-24492)
chr7 (20-77)||(829928-829985)
chr7 (20-77)||(1195108-1195165)
chr7 (20-135)||(44219315-44219430)
chr7 (20-83)||(34487389-34487452)
chr7 (20-83)||(34595392-34595455)
chr7 (20-135)||(13426539-13426654)
chr7 (20-135)||(42516888-42517003)
chr7 (20-126)||(35026691-35026797)
chr7 (20-83)||(19157766-19157829)
chr7 (20-83)||(19476641-19476704)
chr7 (20-83)||(20757165-20757228)
chr7 (20-83)||(22954413-22954476)
chr7 (20-83)||(31579504-31579567)
chr7 (20-83)||(40729136-40729199)
chr7 (20-83)||(24603-24666)
chr7 (24-83)||(22364727-22364785)
chr7 (20-83)||(22364898-22364961)
chr7 (20-83)||(31579678-31579741)
chr7 (20-83)||(34595566-34595629)
chr7 (20-83)||(22954578-22954641)
chr7 (20-83)||(44219541-44219604)
chr7 (20-77)||(44483309-44483366)
chr7 (20-75)||(35026525-35026580)
chr7 (95-135)||(13426346-13426386)
chr7 (20-76)||(34487222-34487278)
[»] chr4 (42 HSPs)
chr4 (20-135)||(17865223-17865338)
chr4 (20-135)||(32592764-32592879)
chr4 (20-83)||(43750194-43750257)
chr4 (20-134)||(37815588-37815703)
chr4 (20-135)||(4712425-4712539)
chr4 (20-78)||(2184472-2184530)
chr4 (20-135)||(26314497-26314611)
chr4 (20-75)||(16491894-16491949)
chr4 (20-75)||(16959845-16959900)
chr4 (20-75)||(22487467-22487522)
chr4 (20-75)||(46481164-46481219)
chr4 (20-70)||(13683251-13683301)
chr4 (20-77)||(11021752-11021809)
chr4 (22-83)||(17107681-17107742)
chr4 (20-133)||(12792595-12792708)
chr4 (20-83)||(2184641-2184704)
chr4 (20-83)||(5721025-5721088)
chr4 (20-83)||(12792819-12792882)
chr4 (20-83)||(46081621-46081684)
chr4 (20-135)||(13492905-13493020)
chr4 (20-135)||(13683025-13683140)
chr4 (22-83)||(17107505-17107566)
chr4 (20-76)||(22487300-22487356)
chr4 (20-74)||(5721199-5721254)
chr4 (20-83)||(9301643-9301706)
chr4 (20-83)||(17865049-17865112)
chr4 (20-71)||(20046049-20046100)
chr4 (20-75)||(37815422-37815477)
chr4 (20-83)||(43750020-43750083)
chr4 (20-135)||(989322-989437)
chr4 (33-87)||(4712248-4712302)
chr4 (20-73)||(11021920-11021973)
chr4 (20-133)||(989101-989211)
chr4 (20-75)||(9301816-9301871)
chr4 (20-83)||(13493131-13493194)
chr4 (20-75)||(16960011-16960066)
chr4 (20-83)||(39385408-39385471)
chr4 (20-83)||(46480990-46481053)
chr4 (20-77)||(16491726-16491783)
chr4 (28-75)||(6100561-6100608)
chr4 (31-83)||(20045875-20045927)
chr4 (31-83)||(26314733-26314785)
[»] chr3 (34 HSPs)
chr3 (20-135)||(17109872-17109987)
chr3 (20-135)||(49500090-49500205)
chr3 (20-132)||(50645719-50645831)
chr3 (20-83)||(52835792-52835855)
chr3 (20-76)||(29838374-29838430)
chr3 (20-83)||(889201-889264)
chr3 (20-138)||(14545853-14545972)
chr3 (20-135)||(32315397-32315512)
chr3 (20-131)||(42093420-42093531)
chr3 (20-135)||(46962603-46962718)
chr3 (20-134)||(26582635-26582748)
chr3 (20-135)||(27284991-27285106)
chr3 (20-83)||(14546083-14546146)
chr3 (20-83)||(33162393-33162456)
chr3 (28-132)||(38807793-38807897)
chr3 (20-83)||(49499916-49499979)
chr3 (20-83)||(52835618-52835681)
chr3 (20-135)||(26582859-26582974)
chr3 (20-83)||(27285216-27285279)
chr3 (20-83)||(27934524-27934587)
chr3 (20-83)||(38807611-38807674)
chr3 (20-77)||(42093642-42093699)
chr3 (20-77)||(46962829-46962886)
chr3 (20-76)||(55092454-55092510)
chr3 (20-83)||(7029458-7029521)
chr3 (20-83)||(16056421-16056484)
chr3 (20-83)||(27934698-27934761)
chr3 (20-75)||(50645553-50645608)
chr3 (20-75)||(55092288-55092343)
chr3 (20-73)||(32315623-32315676)
chr3 (20-83)||(21323135-21323198)
chr3 (20-75)||(29838541-29838596)
chr3 (20-75)||(33162567-33162622)
chr3 (20-75)||(49121797-49121852)
[»] chr1 (33 HSPs)
chr1 (20-135)||(20061819-20061934)
chr1 (20-135)||(28031894-28032009)
chr1 (20-135)||(43191677-43191792)
chr1 (20-135)||(50625013-50625126)
chr1 (20-132)||(42154997-42155108)
chr1 (20-135)||(50096154-50096269)
chr1 (20-133)||(33804-33917)
chr1 (20-125)||(10914021-10914126)
chr1 (20-83)||(14602257-14602320)
chr1 (20-83)||(47829209-47829272)
chr1 (20-83)||(50096380-50096443)
chr1 (20-76)||(39288233-39288290)
chr1 (20-76)||(33637-33693)
chr1 (31-132)||(39027505-39027606)
chr1 (20-83)||(12322339-12322402)
chr1 (20-83)||(20062045-20062108)
chr1 (20-83)||(26244796-26244859)
chr1 (20-83)||(43191903-43191966)
chr1 (20-83)||(50624839-50624902)
chr1 (20-135)||(26244570-26244685)
chr1 (20-135)||(37172269-37172384)
chr1 (20-83)||(14602083-14602146)
chr1 (20-83)||(28031720-28031783)
chr1 (20-83)||(33619143-33619206)
chr1 (20-83)||(42154823-42154886)
chr1 (20-83)||(47829035-47829098)
chr1 (20-76)||(33618976-33619032)
chr1 (20-72)||(51999559-51999611)
chr1 (20-83)||(10913847-10913910)
chr1 (20-87)||(12322161-12322228)
chr1 (20-75)||(18963690-18963745)
chr1 (20-83)||(37172495-37172558)
chr1 (20-61)||(39288401-39288442)
[»] scaffold0170 (2 HSPs)
scaffold0170 (20-83)||(8615-8678)
scaffold0170 (20-83)||(8789-8852)
[»] scaffold0137 (2 HSPs)
scaffold0137 (20-83)||(36838-36901)
scaffold0137 (20-60)||(37012-37052)
[»] scaffold0021 (1 HSPs)
scaffold0021 (20-135)||(118279-118394)
[»] scaffold0028 (2 HSPs)
scaffold0028 (20-83)||(74161-74224)
scaffold0028 (20-66)||(74005-74051)
[»] scaffold0006 (2 HSPs)
scaffold0006 (20-134)||(212434-212548)
scaffold0006 (20-83)||(212659-212722)
[»] scaffold0167 (1 HSPs)
scaffold0167 (20-83)||(4634-4697)
[»] scaffold0147 (2 HSPs)
scaffold0147 (20-132)||(25147-25259)
scaffold0147 (20-83)||(25358-25421)
[»] scaffold0126 (2 HSPs)
scaffold0126 (20-83)||(36241-36304)
scaffold0126 (20-75)||(36075-36130)


Alignment Details
Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 10660160 - 10660249
Alignment:
Q  209 acgttctaaacgagttaatatttgaatttggggtggaccccgataactcatacctaaagccaatcaagaccagaaaaaccttctctcctt 298  Q
    ||||| |||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10660160 acgttttaaacgagttaacatttgaatttggggtggacactgataactcatacctaaagccaatcaagaccagaaaaaccttctatcctt 10660249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 31685918 - 31685981
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31685918 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagggactaa 31685981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 13405695 - 13405810
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||       |||| ||||||| | |||||| |||    
T  13405695 tttacaaggaataaaacaaaataccaaggaccaaaaccaaattttttatatttgaagggactaaaaccaaaaaaatatttttacagggattaaaaccaaa 13405794  T
Q  120 atgtcaaatatttgca 135  Q
    ||||||||||||||||    
T  13405795 atgtcaaatatttgca 13405810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 3272967 - 3273082
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| | |       |||| ||| ||| |||||||| |||    
T  3272967 tttacaaggactaaaacaaaataccaaggaccaaaaccaagttttttatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaaccaaa 3273066  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  3273067 atgtcagatatttgca 3273082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 9180292 - 9180407
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | ||||| |||       |||| ||||||| | |||||| |||    
T  9180292 tttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaaggactaaaaccaaaacaatatttttacagggattaaaaccaaa 9180391  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  9180392 atgtcagatatttgca 9180407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 6943904 - 6944019
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||| ||||||  ||| ||||||| ||||||||| ||||||||||| ||||| |||       |||| |||||||||||||||| |||    
T  6943904 tttacaaggactaaaataaaatatcaagaaccaaaatcaaatttttcatatttgcagggactaaaaccaaaaaaatatttttacaggaactaaaaccaaa 6944003  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  6944004 atgtcagatatttgca 6944019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 26479460 - 26479347
Alignment:
Q  21 ttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaaa 120  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||  ||||| |||       | || ||||||| |||||||| ||||    
T  26479460 ttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagtgactaaaaccaatttttt-tttttacagggactaaaaccaaaa 26479362  T
Q  121 tgtcaaatatttgca 135  Q
    |||||||||||||||    
T  26479361 tgtcaaatatttgca 26479347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 13154486 - 13154599
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||       |||| ||||||| | |||||  |||    
T  13154486 tttacaaggacaaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaaccaaaaaaatatttttacagggattaaaatcaaa 13154585  T
Q  120 atgtcaaatatttg 133  Q
    |||||| |||||||    
T  13154586 atgtcagatatttg 13154599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 24332509 - 24332560
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatt 71  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24332509 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatt 24332560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 26479541 - 26479604
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||||||||||||||||||||| || |||||||||||| |||||    
T  26479541 tttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagggactaa 26479604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 2835342 - 2835454
Alignment:
Q  21 ttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaaa 120  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||| | |       |||| ||||||  |||||||| ||||    
T  2835342 ttacaaggactaaaacaaaataccaagaaccaaaacc-aattttttatatttgcagggactaaaatcaaaaaaatatttttacagcgactaaaaccaaaa 2835440  T
Q  121 tgtcaaatatttgc 134  Q
    ||||| ||||||||    
T  2835441 tgtcagatatttgc 2835454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 6891914 - 6891851
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  6891914 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 6891851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 6943793 - 6943730
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  6943793 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 6943730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 18764532 - 18764595
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  18764532 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 18764595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 31186620 - 31186683
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||| |||||    
T  31186620 tttacaaggactacaacaaaataccaaggaccaaaaccaaattttttagatttacagggactaa 31186683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 18764421 - 18764306
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||| |||||||||||| || ||||||||||||| |||||||||||| ||| ||| | |||       |||| ||||| | |||||||| |||    
T  18764421 tttacaaggacaaaaacaaaataccaaagaccaaaaccaaagtttttatatttgaagggactcaaaccaaaaaaatatttttacaaggactaaaaccaaa 18764322  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  18764321 atgtcagatatttgca 18764306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 220648 - 220585
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  220648 tttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 220585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 689803 - 689740
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  689803 tttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 689740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 734271 - 734208
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  734271 tttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 734208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 858167 - 858104
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  858167 tttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 858104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 13154375 - 13154312
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| || |||||||||||| |||||    
T  13154375 tttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaa 13154312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 24332398 - 24332335
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||| ||||||||| || |||||||||||| |||||    
T  24332398 tttacaaggattaaaacaaaataccaaggacccaaaccaaatattctatatttgcagggactaa 24332335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 31403160 - 31403223
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||| ||| |||||    
T  31403160 tttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgaagggactaa 31403223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 31685806 - 31685751
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||    
T  31685806 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgca 31685751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 37586154 - 37586110
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaatttt 64  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  37586154 tttacaaggactaaaacaaaataccaaggaccaaaactaaatttt 37586110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 31403049 - 31402986
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||| ||| |||||||| ||| || |||||||||||||| ||||||||||||||| |||||    
T  31403049 tttacaaagacgaaaacaaattaccaacgaccaaaaccaaatattttatatttgcagggactaa 31402986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 2835261 - 2835209
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatattt 72  Q
    ||||||| || |||||||||||||  |||||||||||||||| ||||||||||    
T  2835261 tttacaatgattaaaacaaaataccgaggaccaaaaccaaatattttatattt 2835209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 3272856 - 3272816
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaa 60  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  3272856 tttacaaggattaaaacaaaataccaaggaccaaaaccaaa 3272816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 6892025 - 6892065
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaa 60  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  6892025 tttacaaggactaaaacaaaacaccaaggaccaaaaccaaa 6892065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 31186499 - 31186447
Alignment:
Q  31 taaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||||||||| || |||||||||||||| || |||||||||||| |||||    
T  31186499 taaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggactaa 31186447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 20112663 - 20112726
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||||||||||||||||  |||||  |||| ||||||||||||||||  |||||||||    
T  20112663 tttagaaggactaaaacaaaatatcaaggattaaaatcaaattttttatatttagaggaactaa 20112726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 37586264 - 37586305
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaat 61  Q
    ||||| |||| ||||||||||||| |||||||||||||||||    
T  37586264 tttaccaggattaaaacaaaataccaaggaccaaaaccaaat 37586305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 4229 - 4344
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  4229 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 4328  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  4329 atgtcagatatttgca 4344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 4119 - 4056
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||||||| |||| |||||    
T  4119 tttacaaggattaaaacaaaataccaaggaccaaaaccaaattttctatatttacagggactaa 4056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 30609002 - 30608887
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  30609002 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaactaaa 30608903  T
Q  120 atgtcaaatatttgca 135  Q
    || |||||||||||||    
T  30608902 atatcaaatatttgca 30608887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 17238281 - 17238396
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  17238281 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcagggactaaaaccaaaaaattatttttacagggactaaaaccaaa 17238380  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  17238381 atgtcagatatttgca 17238396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 28853732 - 28853845
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||       |||| ||| ||| |||||||| |||    
T  28853732 tttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaaccaaaaaaatatttttatagggactaaaaccaaa 28853831  T
Q  120 atgtcaaatatttg 133  Q
    |||||| |||||||    
T  28853832 atgtcagatatttg 28853845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 9571643 - 9571761
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  9571643 tttacaaggactaaaacaaaatacgaaggatcaaaatcaaatttttcatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaactaaa 9571742  T
Q  120 atgtcaaatatttgcaagg 138  Q
    |||||| ||||||||||||    
T  9571743 atgtcagatatttgcaagg 9571761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 5404817 - 5404880
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  5404817 tttacaaggactaaaacaaaatactaatgaccaaaaccaaattttttatatttgcagggactaa 5404880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 5924074 - 5924190
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaatac-cnnnnnnntattgttacaggaactaaaacaaa 118  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||         |||| |||||||||||||||| ||    
T  5924074 tttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgtagggactaaaacataaaaaaatatttttacaggaactaaaaccaa 5924173  T
Q  119 aatgtcaaatatttgca 135  Q
    ||||||| |||||||||    
T  5924174 aatgtcagatatttgca 5924190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 26272227 - 26272339
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||       |||| ||| ||| |||||||| |||    
T  26272227 tttacaaggactaaaacaatataccaaggaccaaaatcaaattttttatatttgcaggaactaaaaccaaaaatatatttttatagggactaaaaccaaa 26272326  T
Q  120 atgtcaaatattt 132  Q
    |||||| ||||||    
T  26272327 atgtcagatattt 26272339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 3485021 - 3485136
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| | |       |||| || |||| |||||||| |||    
T  3485021 tttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttgcagggactaaaaccaaa 3485120  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  3485121 atgtcacatatttgca 3485136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 8926434 - 8926548
Alignment:
Q  20 tttacaaggactaaaacaaaata--ctaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaa 117  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |    
T  8926434 tttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 8926533  T
Q  118 aaatgtcaaatattt 132  Q
    |||||||| ||||||    
T  8926534 aaatgtcagatattt 8926548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 8936691 - 8936805
Alignment:
Q  20 tttacaaggactaaaacaaaata--ctaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaa 117  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |    
T  8936691 tttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 8936790  T
Q  118 aaatgtcaaatattt 132  Q
    |||||||| ||||||    
T  8936791 aaatgtcagatattt 8936805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 19661485 - 19661371
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||       |||| |||||| ||||||||| |||    
T  19661485 tttacaaagactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaacc-aaaaaatatttttacagaaactaaaaccaaa 19661387  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  19661386 atgtcagatatttgca 19661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 31717422 - 31717485
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  31717422 tttacaaggactaaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaa 31717485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 3345156 - 3345093
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  3345156 tttacaagaagtaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 3345093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 3345266 - 3345329
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  3345266 tttacaaggattaaaacaaaatactaaggaccaaaaccaaatgttctatatttacaggaactaa 3345329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 16525440 - 16525503
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  16525440 tttacaaggattaaaacaaaatacgaaggaccaaaaccaaattttttatatttacagggactaa 16525503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 29819633 - 29819687
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgc 74  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  29819633 tttacaaggactaaaacaaaataccaatgaccaaaaccaaattttttatatttgc 29819687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 19661596 - 19661659
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  19661596 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 19661659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 29819522 - 29819459
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  29819522 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 29819459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 33783644 - 33783707
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  33783644 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 33783707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 31717311 - 31717196
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||| | ||||| |||       |||| ||| ||| | |||||| |||    
T  31717311 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaaccaaaaaaatatttttatagggattaaaaccaaa 31717212  T
Q  120 atgtcaaatatttgca 135  Q
    | ||||||||||||||    
T  31717211 acgtcaaatatttgca 31717196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 3484920 - 3484857
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||| || ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  3484920 tttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 3484857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 5923963 - 5923900
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||| |||||||| |||||    
T  5923963 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaa 5923900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 8926323 - 8926260
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||| |||||||| |||||    
T  8926323 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaa 8926260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 8936580 - 8936517
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||| |||||||| |||||    
T  8936580 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaa 8936517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 30609113 - 30609168
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||    
T  30609113 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgca 30609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 33783533 - 33783478
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    ||||||||||| |||||||||||  ||| |||||||||||||||||||||||||||    
T  33783533 tttacaaggacaaaaacaaaatatcaagaaccaaaaccaaattttttatatttgca 33783478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 17238170 - 17238117
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttg 73  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||||||||    
T  17238170 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttg 17238117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 16525329 - 16525266
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| || ||  |||||||||| ||||||||||||||| |||||    
T  16525329 tttacaaggattaaaacaaaataccaaagataaaaaccaaatattttatatttgcagggactaa 16525266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 28853621 - 28853558
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||| ||||||||||||| |||||||||||| |||| || |||||||||||| |||||    
T  28853621 tttagaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaa 28853558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 5404706 - 5404666
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaa 60  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  5404706 tttacaaggattaaaacaaaataccaaggaccaaaaccaaa 5404666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 5409170 - 5409205
Alignment:
Q  48 gaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||||||||| |||||    
T  5409170 gaccaaaaccaaattttttatatttgcagggactaa 5409205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 43413 - 43298
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||        |||| ||||||| |||||||| |||    
T  43413 tttacaagtactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacaaaaaatatatttttacagggactaaaaccaaa 43314  T
Q  120 atgtcaaatatttgca 135  Q
    ||||||||||||||||    
T  43313 atgtcaaatatttgca 43298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 43525 - 43588
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| || |||||||||||| |||||    
T  43525 tttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaa 43588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 18369149 - 18369034
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  18369149 tttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaacccaaaaaatatttttacagggactaaaaccaaa 18369050  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  18369049 atgtcagatatttgca 18369034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 29683421 - 29683536
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||  |||    
T  29683421 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaatcaaa 29683520  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  29683521 atgtcagatatttgca 29683536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 14379249 - 14379131
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  14379249 tttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttacatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 14379150  T
Q  120 atgtcaaatatttgcaagg 138  Q
    |||||| ||||||||||||    
T  14379149 atgtcagatatttgcaagg 14379131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 28921440 - 28921555
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| | |||||| |||    
T  28921440 tttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggattaaaaccaaa 28921539  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  28921540 atgtcatatatttgca 28921555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 7877460 - 7877397
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  7877460 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 7877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 10748630 - 10748515
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| | ||| |||       |||| ||||||| |||||||| |||    
T  10748630 tttacaaggactaaaacaaagtaccaaggaccaaaaccaaattttttatatttgcagggattaaaaccaaaaaaatatttttacagggactaaaaccaaa 10748531  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| || ||||||    
T  10748530 atgtcagatgtttgca 10748515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 12806796 - 12806911
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||       |||| |||| || |||||||| |||    
T  12806796 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaatatttttacggggactaaaaccaaa 12806895  T
Q  120 atgtcaaatatttgca 135  Q
    |||| | |||||||||    
T  12806896 atgttagatatttgca 12806911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 17457854 - 17457739
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |         | || |||||||||||||||| |||    
T  17457854 tttacaaggactaaaacaaaatatcaaggaccaaaacctaattttttatatttgcaggaactaaaataaattttttttttttacaggaactaaaaccaaa 17457755  T
Q  120 atgtcaaatatttgca 135  Q
    || |||||||||||||    
T  17457754 atttcaaatatttgca 17457739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 41594087 - 41593972
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||| |||||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||       |||| ||||||| |||||||| |||    
T  41594087 tttacaaagactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcaggaactaaaaccaaaaaaatatttttacagggactaaaaccaaa 41593988  T
Q  120 atgtcaaatatttgca 135  Q
    || ||| |||||||||    
T  41593987 atatcagatatttgca 41593972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 3371549 - 3371612
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  3371549 tttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaa 3371612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 3948500 - 3948437
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||    
T  3948500 tttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttgcagggactaa 3948437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 33940817 - 33940754
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  33940817 tttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaa 33940754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 41594198 - 41594313
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||  || |||||||||||||| ||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  41594198 tttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 41594297  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  41594298 atgtcagatatttgca 41594313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 6164034 - 6163978
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  6164034 tttacaaggactaaaacaaaataccaaggaccaaaactaaattttttatatttgcag 6163978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 6880109 - 6880046
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  6880109 tttacatggactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaa 6880046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 19204839 - 19204902
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  19204839 tttacaagtattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 19204902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 37609092 - 37609037
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  37609092 tttacaaggacaaaaacaaaataccaaggaccaaaaccaaattttttatatttgca 37609037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 2395404 - 2395519
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||| ||||||||||  ||||||||||| ||||||||||||||||||||| | ||| ||        |||| ||||||| |||||||| |||    
T  2395404 tttacaaggacttaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggattaaaacaaaaaaaatatttttacagggactaaaaccaaa 2395503  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  2395504 atgtcagatatttgca 2395519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 4171772 - 4171887
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| || ||||| |||       |||| |||| |  |||||||| |||    
T  4171772 tttacaaggattaaaacaaattaccaaggaccaaaaccaaattttttatatttgctgggactaaaaccaaaaaaatatttttaccgagactaaaaccaaa 4171871  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  4171872 atgtcagatatttgca 4171887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 32521722 - 32521779
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  32521722 tttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagg 32521779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 13572718 - 13572835
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||||||||||| |||| |||  |||||| |||||||||||||||||| || ||||| |||       |||| ||||||| | |||||| |||    
T  13572718 tttacaaggactaaaacaatatacaaagtgccaaaatcaaattttttatatttgctgggactaaaaccaaaaaaatatttttacagggattaaaaccaaa 13572817  T
Q  120 atgtcaaatatttgcaag 137  Q
    |||||| |||||||||||    
T  13572818 atgtcatatatttgcaag 13572835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 3371438 - 3371375
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| |||||||||||| |||| || ||||||||||||||||||    
T  3371438 tttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaggaactaa 3371375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 6164145 - 6164208
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||||||||||||||||||||| || ||||||||| || |||||    
T  6164145 tttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgctgggactaa 6164208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 7877571 - 7877634
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  7877571 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 7877634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 19204728 - 19204665
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  19204728 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 19204665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 42705199 - 42705254
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  42705199 tttacaaggattaaaacaaaataccaaggtccaaaaccaaattttttatatttgca 42705254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 30432731 - 30432686
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttt 65  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  30432731 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttt 30432686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 30432842 - 30432956
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||  || |||||||||||||  || |||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  30432842 tttacaaggattaaaacaaaataacaaagaccaaaaccaaaaattctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 30432941  T
Q  120 atgtcaaatatttgc 134  Q
    |||||| ||||||||    
T  30432942 atgtcagatatttgc 30432956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 17457965 - 17458021
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    |||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||    
T  17457965 tttacaaggattaaaacaaaataccaaggaccaaaactaaatattttatatttgcag 17458021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 2395293 - 2395230
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||| ||||||| |||||| |||||||||| || |||||||||||| |||||    
T  2395293 tttacaaggactaaaataaaataccaaggactaaaaccaaatattctatatttgcagggactaa 2395230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 3948611 - 3948674
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||  ||||||||||||||||| || |||||||||||| |||||    
T  3948611 tttacaaggattaaaacaaaatataaaggaccaaaaccaaatattctatatttgcagggactaa 3948674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 4171661 - 4171598
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| || |||||||||||||| || |||||||||||| |||||    
T  4171661 tttacaaggattaaaacaaaataccaaagaccaaaaccaaatgttctatatttgcagggactaa 4171598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 12806685 - 12806622
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| || |||||||||||| |||||    
T  12806685 tttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaa 12806622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 13572607 - 13572544
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||  || |||||||||||| |||||    
T  13572607 tttacaaggattaaaacaaaataccaaggaccaaaaccaaacattctatatttgcagggactaa 13572544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 28921329 - 28921266
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| || |||||||||||| |||||    
T  28921329 tttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaa 28921266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 6880220 - 6880276
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    ||||||| || ||||||||||||| ||||||||||||||||| || |||||||||||    
T  6880220 tttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcag 6880276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 18369260 - 18369323
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||  || |||||||||||||| || |||||||||||| |||||    
T  18369260 tttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaa 18369323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 25318452 - 25318389
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| |||||| |||||||||||  ||||||||||||||| |||||||||||||| | ||||||    
T  25318452 tttataaggacaaaaacaaaatatcaaggaccaaaaccaatttttttatatttgctgaaactaa 25318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 30771204 - 30771149
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||| ||||||    
T  30771204 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgca 30771149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 38873608 - 38873553
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||| | ||||||||||||| ||||||||||||||||| || ||||||||||    
T  38873608 tttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgca 38873553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 13278116 - 13278154
Alignment:
Q  97 ttgttacaggaactaaaacaaaaatgtcaaatatttgca 135  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13278116 ttgttacaggaactaaaactaaaatgtcaaatatttgca 13278154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 10748741 - 10748793
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatattt 72  Q
    |||||||||| ||||||||||||| || |||||||||||||| || |||||||    
T  10748741 tttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatattt 10748793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 32521611 - 32521559
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatattt 72  Q
    ||||||| || ||||||||||||| || |||||||||||||| ||||||||||    
T  32521611 tttacaaagattaaaacaaaataccaaagaccaaaaccaaatattttatattt 32521559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 14379360 - 14379415
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| |||||| |||||||||| || ||| ||||||    
T  14379360 tttacaaggattaaaacaaaataccaaggacaaaaaccaaatattctatttttgca 14379415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 33940924 - 33940987
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||| ||||||||||||  || |||||||||||||| || |||||||||||| |||||    
T  33940924 tttataaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaa 33940987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 37609201 - 37609320
Alignment:
Q  20 tttacaaggactaaaa-caaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaa 118  Q
    |||||||||| ||||| | ||| || ||||||||||||||||| || |||||||||||| ||||| |||       |||| ||| ||| |||||||| ||    
T  37609201 tttacaaggattaaaaactaaaaaccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttagagggactaaaaccaa 37609300  T
Q  119 aatgtcaaatatttgcaagg 138  Q
    || | || ||||||||||||    
T  37609301 aacgccagatatttgcaagg 37609320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 25318541 - 25318594
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttg 73  Q
    |||||||||| ||||||||||||| || |||||||| ||||| || ||||||||    
T  25318541 tttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttg 25318594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 29683311 - 29683255
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||||||||| ||||||||||||| |||| || ||||||||| || ||||||||||||    
T  29683311 tttacaaggattaaaacaaaataccaagggcc-aaaccaaatattctatatttgcagg 29683255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 9e-27; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 3598660 - 3598778
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  3598660 tttacaaggactaaaacaaaataccaaggaccaaaaccaaatttcctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 3598759  T
Q  120 atgtcaaatatttgcaagg 138  Q
    |||||| ||||||||||||    
T  3598760 atgtcagatatttgcaagg 3598778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 43197037 - 43196919
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  43197037 tttacaaggactaaaacaaaacactaaggaccaaaactaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 43196938  T
Q  120 atgtcaaatatttgcaagg 138  Q
    |||||| ||||||| ||||    
T  43196937 atgtcagatatttgtaagg 43196919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 6497439 - 6497554
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| | |       |||| ||||||| |||||||| |||    
T  6497439 tttacaaggactaaaacaaaatatcaaggatcaaaaccaaattttttatatttgcaggaactaaaatcaaaaaaatatttttacagggactaaaaccaaa 6497538  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  6497539 atgtcagatatttgca 6497554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 22394260 - 22394145
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  22394260 tttacaaggactaaaacaaaatatcagggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 22394161  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  22394160 atgtcagatatttgca 22394145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 10461481 - 10461418
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  10461481 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 10461418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 4122713 - 4122650
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  4122713 tttacaaagactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 4122650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 14868920 - 14869034
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||| |||       |||| ||||||  |||||||| |||    
T  14868920 tttacaaggactaaaacaaaataccaaggatcaaaaccaaa-tttttatatttgcagggactaaaaccaaaaaaatatttttacagtgactaaaaccaaa 14869018  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  14869019 atgtcagatatttgca 14869034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 24491090 - 24491195
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  ||||||||||||||||| || |||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  24491090 tttacaaggactaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaacaaatatttttacagggactaaaaccaaa 24491189  T
Q  120 atgtca 125  Q
    ||||||    
T  24491190 atgtca 24491195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 5933261 - 5933198
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| |||||    
T  5933261 tttacaaggactaaaacaaaataccaaagaccaaaaccaaatattttatatttgcagggactaa 5933198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 15969677 - 15969740
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  15969677 tttacaagaacttaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 15969740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 3598549 - 3598434
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||| | ||||||||||||| ||||||||||||||||| || |||||||||||| ||||| |||       |||| ||||||| |||||| | |||    
T  3598549 tttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaatccaaa 3598450  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  3598449 atgtcagatatttgca 3598434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 6542395 - 6542281
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||| ||||| |||       |||| ||||| | |||||||| |||    
T  6542395 tttacaaggactaaaataaaataccaaggatcaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacatggactaaaaccaaa 6542296  T
Q  120 atgtcaaatatttgc 134  Q
    || ||| ||||||||    
T  6542295 atatcagatatttgc 6542281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 24490979 - 24490865
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||||||||||||||||  | || |||||||||||||| |||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  24490979 tttacaaggactaaaacaaaataccgatgatcaaaaccaaattttctatatttgcagggactaaaacc-aaaaaatatttttacagggactaaaaccaaa 24490881  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  24490880 atgtcagatatttgca 24490865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 25329233 - 25329119
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||| ||||| ||        |||| |||||||||||||||  |||    
T  25329233 tttacaaggactaaaacataatacgaaggaccaaaatcaaattttttatatttgtagggactaaaacaaaaaatatatttttacaggaactaaaatcaaa 25329134  T
Q  120 atgtcaaatatttgc 134  Q
    || ||| ||||||||    
T  25329133 atatcagatatttgc 25329119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 14868809 - 14868753
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    |||||||||| ||||||||||||||||||||||||||||||| || |||||||||||    
T  14868809 tttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcag 14868753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 5933372 - 5933435
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  5933372 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 5933435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 7133372 - 7133435
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||| |||||    
T  7133372 tttacaaggactaaaaaaaaataccaaggaccaaaaccaaaaattttatatttgcagggactaa 7133435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 18786117 - 18786062
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  18786117 tttacaaggactaaaacaaaataccaaggaccaaaaccaaatattctatatttgca 18786062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 43197148 - 43197211
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  43197148 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 43197211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 18786228 - 18786286
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagga 78  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||||    
T  18786228 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagga 18786286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 15969566 - 15969448
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||  ||||| |||       |||| ||| ||| |||||||| |||    
T  15969566 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagactaaaaccaaaaatatatttttatagggactaaaaccaaa 15969467  T
Q  120 atgtcaaatatttgcaagg 138  Q
    | | |||||||||| ||||    
T  15969466 acgccaaatatttgtaagg 15969448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 29991238 - 29991181
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||    
T  29991238 tttacaaggattaaaacaaaataccaagaaccaaaaccaaatattttatatttgcagg 29991181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 6497328 - 6497265
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  6497328 tttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 6497265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 6542506 - 6542569
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| |||||| |||||||||| || |||||||||||| |||||    
T  6542506 tttacaaggattaaaacaaaataccaaggactaaaaccaaatattctatatttgcagggactaa 6542569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 10461592 - 10461655
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| || |||||||||||||| || |||||||||||| |||||    
T  10461592 tttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggactaa 10461655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 22394371 - 22394426
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||    
T  22394371 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgca 22394426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 29991349 - 29991412
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||  || |||||||| ||||||||||||||||| ||| |||||    
T  29991349 tttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgtagggactaa 29991412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 41137277 - 41137222
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| |||||||||||| |||| || ||||||||||    
T  41137277 tttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgca 41137222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 41137388 - 41137428
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaa 60  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  41137388 tttacaaggactaaaacaaaataccaaggactaaaaccaaa 41137428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 4122824 - 4122887
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||| |||| ||||||||||||  ||||||||||||||||| || ||||||| |||| |||||    
T  4122824 tttactaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttacagggactaa 4122887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 40588897 - 40588959
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||| | ||||||||||||| ||||| |||| |||||| ||||||||||||||| |||||    
T  40588897 tttacaagaattaaaacaaaataccaaggatcaaa-ccaaatattttatatttgcagggactaa 40588959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 40589500 - 40589562
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||| | ||||||||||||| ||||| |||| |||||| ||||||||||||||| |||||    
T  40589500 tttacaagaattaaaacaaaataccaaggatcaaa-ccaaatattttatatttgcagggactaa 40589562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 40729310 - 40729426
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  40729310 tttacaaggactaaaacaaaacaccaaggaccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 40729409  T
Q  120 atgtcaaatatttgcaa 136  Q
    |||||| ||||||||||    
T  40729410 atgtcagatatttgcaa 40729426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 42517114 - 42517228
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  42517114 tttacaaggactaaaacaaaataccaaggactaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 42517213  T
Q  120 atgtcaaatatttgc 134  Q
    |||||| ||||||||    
T  42517214 atgtcagatatttgc 42517228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 44483473 - 44483587
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  44483473 tttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 44483572  T
Q  120 atgtcaaatatttgc 134  Q
    |||| ||||||||||    
T  44483573 atgttaaatatttgc 44483587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 19157940 - 19158055
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||        |||| ||||||| |||||||| |||    
T  19157940 tttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaaccaaa 19158039  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  19158040 atgtcagatatttgca 19158055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 20757339 - 20757454
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||        |||| ||||||| |||||||| |||    
T  20757339 tttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaaccaaa 20757438  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  20757439 atgtcagatatttgca 20757454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 24492 - 24378
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  24492 tttacaaggaataaaacaaaatacaaaggtccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 24393  T
Q  120 atgtcaaatatttgc 134  Q
    |||||| ||||||||    
T  24392 atgtcagatatttgc 24378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 829928 - 829985
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  829928 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagg 829985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 1195108 - 1195165
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1195108 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagg 1195165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 44219430 - 44219315
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||| | |       |||| ||||||  |||||||| |||    
T  44219430 tttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttatagggactaaaaacaaaaaaatatttttacagtgactaaaaccaaa 44219331  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  44219330 atgtcagatatttgca 44219315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 34487389 - 34487452
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||    
T  34487389 tttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttggagggactaa 34487452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 34595455 - 34595392
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| |||||    
T  34595455 tttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttaatttgcagggactaa 34595392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 13426539 - 13426654
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| ||||| |||       |||| ||| ||| |||||||| |||    
T  13426539 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttagagggactaaaactaaa 13426638  T
Q  120 atgtcaaatatttgca 135  Q
    | |||| |||||||||    
T  13426639 acgtcagatatttgca 13426654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 42517003 - 42516888
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| |||||||||||| |||| || |||||||||||| ||||| |||       |||| ||| |||||||||||| |||    
T  42517003 tttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaaaaccaaaaaaatatttttataggaactaaaaccaaa 42516904  T
Q  120 atgtcaaatatttgca 135  Q
    ||| || |||||||||    
T  42516903 atgccagatatttgca 42516888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 35026691 - 35026797
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||  ||||| |||       |||| ||||| |||||||||| |||    
T  35026691 tttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttacagagactaaaaccaaaaaaatatttttacatgaactaaaaccaaa 35026790  T
Q  120 atgtcaa 126  Q
    |||||||    
T  35026791 atgtcaa 35026797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 19157829 - 19157766
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  19157829 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 19157766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 19476641 - 19476704
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  19476641 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 19476704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 20757228 - 20757165
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  20757228 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 20757165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 22954476 - 22954413
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||  |||||||| |||||| ||||||||||||||||| |||||    
T  22954476 tttacaaggactaaaacaaaatatcaaggaccacaaccaatttttttatatttgcagggactaa 22954413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 31579567 - 31579504
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||||||| |||||    
T  31579567 tttacaaggacaaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaa 31579504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 40729199 - 40729136
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  40729199 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 40729136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 24603 - 24666
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||| |||||||| |||||    
T  24603 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaa 24666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 22364785 - 22364727
Alignment:
Q  24 caaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||||||| |||||    
T  22364785 caaggactaaaacaaaatatcaaggaccaaa-ccaaattttttatatttgcagggactaa 22364727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 22364898 - 22364961
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| || |||||||||||| |||||    
T  22364898 tttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaa 22364961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 31579678 - 31579741
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| || |||||||| ||||| ||||||||||||||| |||||    
T  31579678 tttacaaggattaaaacaaaataccaaagaccaaaatcaaatattttatatttgcagggactaa 31579741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 34595566 - 34595629
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| |||||||| |||| ||||||||||||||||| || |||||||||||| |||||    
T  34595566 tttacaaggattaaaacaatataccaaggaccaaaaccaaatattctatatttgcagggactaa 34595629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 22954578 - 22954641
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| || |||||||| ||||| || |||||||||||| |||||    
T  22954578 tttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgcagggactaa 22954641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 44219541 - 44219604
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| |||| |||||||||||| || ||| |||||||| |||||    
T  44219541 tttacaaggattaaaacaaaataccaagggccaaaaccaaatattctatttttgcagggactaa 44219604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 44483366 - 44483309
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||||||||| ||||||||||||  |||||| |||||||||| || ||||||||||||    
T  44483366 tttacaaggattaaaacaaaatatcaaggactaaaaccaaatattctatatttgcagg 44483309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 35026580 - 35026525
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| || || ||||||||||| || ||||||||||    
T  35026580 tttacaaggattaaaacaaaataccaatgatcaaaaccaaatattctatatttgca 35026525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 13426386 - 13426346
Alignment:
Q  95 tattgttacaggaactaaaacaaaaatgtcaaatatttgca 135  Q
    |||| |||||||||||||||| ||||||||| |||||||||    
T  13426386 tatttttacaggaactaaaaccaaaatgtcagatatttgca 13426346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 34487278 - 34487222
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    ||||||| || ||||||||||||| || ||| |||||||||| || |||||||||||    
T  34487278 tttacaacgattaaaacaaaataccaaagacaaaaaccaaatattctatatttgcag 34487222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 17865223 - 17865338
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  17865223 tttacaaggattaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 17865322  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  17865323 atgtcagatatttgca 17865338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 32592879 - 32592764
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| ||||| |||       |||| ||||| | |||||||| |||    
T  32592879 tttacaaggactaaaacaaaatatcaaggaccaaaaccaaaatttttatatttgcagggactaaaaccaaaaaaatatttttacaaggactaaaaccaaa 32592780  T
Q  120 atgtcaaatatttgca 135  Q
    ||||||||||||||||    
T  32592779 atgtcaaatatttgca 32592764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 43750194 - 43750257
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  43750194 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 43750257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 37815588 - 37815703
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaatacc-nnnnnnntattgttacaggaactaaaacaaa 118  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||        |||| ||||||| |||||||| ||    
T  37815588 tttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaaatatttttacagggactaaaaccaa 37815687  T
Q  119 aatgtcaaatatttgc 134  Q
    ||||||| ||||||||    
T  37815688 aatgtcagatatttgc 37815703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 4712425 - 4712539
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||| ||| |||||||| |||    
T  4712425 tttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc-aaaaaatatttttatagggactaaaaccaaa 4712523  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  4712524 atgtcagatatttgca 4712539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 2184530 - 2184472
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagga 78  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  2184530 tttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttaatatttgcagga 2184472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 26314611 - 26314497
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||| ||||| |||       || | ||||||| |||||||| |||    
T  26314611 tttacaaggactaaaacaaaataccaaggaccaaaaac-aattttttatatttgcagggactaaaaccaaaaaaatagttttacagggactaaaaccaaa 26314513  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  26314512 atgtcagatatttgca 26314497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 16491894 - 16491949
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  16491894 tttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgca 16491949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 16959900 - 16959845
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  16959900 tttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgca 16959845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 22487467 - 22487522
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  22487467 tttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttcatatttgca 22487522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 46481164 - 46481219
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  46481164 tttacaaggactaaaacaaaataccaaggaccataaccaaattttttatatttgca 46481219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 13683251 - 13683301
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatat 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13683251 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatat 13683301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 11021809 - 11021752
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  11021809 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagg 11021752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 17107681 - 17107742
Alignment:
Q  22 tacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||    
T  17107681 tacaaggactaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaa 17107742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 12792708 - 12792595
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||||||||||||||||| ||||| | |       |||| ||||||| |||||||| |||    
T  12792708 tttacaaggattaaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggactaaaatcaaaaaaatatttttacagggactaaaaccaaa 12792609  T
Q  120 atgtcaaatatttg 133  Q
    ||| || |||||||    
T  12792608 atgacagatatttg 12792595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 2184641 - 2184704
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  2184641 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 2184704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 5721088 - 5721025
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  5721088 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 5721025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 12792819 - 12792882
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  12792819 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 12792882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 46081621 - 46081684
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||| ||||||    
T  46081621 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagaaactaa 46081684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 13493020 - 13492905
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| || |||||||||||| |||||| |||||||||| ||||| |||       |||| ||| ||| |||||||| |||    
T  13493020 tttacaaggaataaaacaaaataccaaagaccaaaaccaatttttttttatttgcagggactaaaaccaaaaaaatatttttagagggactaaaaccaaa 13492921  T
Q  120 atgtcaaatatttgca 135  Q
    | |||| |||||||||    
T  13492920 aagtcagatatttgca 13492905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 13683140 - 13683025
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| |||| |||||||| ||||||||||||||||| || ||||||| |||| ||||| |||       |||| ||| ||| |||||||| |||    
T  13683140 tttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttacagggactaaaaccaaaaaaatatttttatagggactaaaaccaaa 13683041  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  13683040 atgtcagatatttgca 13683025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 17107566 - 17107505
Alignment:
Q  22 tacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  17107566 tacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 17107505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 22487356 - 22487300
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||    
T  22487356 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcag 22487300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 5721199 - 5721254
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggacc-aaaaccaaattttttatatttgc 74  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||||||||||    
T  5721199 tttacaaggactaaaacaaaataccaatgaccaaaaaccaaattttttatatttgc 5721254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 9301706 - 9301643
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||| |||| ||| |||||    
T  9301706 tttacaaggactaaaacaaaatttcaaggaccaaaaccaaattttttatgtttgaagggactaa 9301643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 17865112 - 17865049
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||  ||||||||||||||||| || |||||||||||| |||||    
T  17865112 tttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggactaa 17865049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 20046049 - 20046100
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatt 71  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  20046049 tttacaagaactaaaacaaaatagcaaggaccaaaaccaaattttttatatt 20046100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 37815477 - 37815422
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||    
T  37815477 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgca 37815422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 43750083 - 43750020
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| |||| |||||||| ||||||||||||||||| || |||||||||||| |||||    
T  43750083 tttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 43750020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 989322 - 989437
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| || |||||||||||||| || ||||| |||||| ||||| |||       |||| ||| ||| |||||||| |||    
T  989322 tttacaaggattaaaacaaaataccaaagaccaaaaccaaatattctatatctgcagggactaaaaccaaaaaaatatttttatagggactaaaaccaaa 989421  T
Q  120 atgtcaaatatttgca 135  Q
    | |||| |||||||||    
T  989422 acgtcagatatttgca 989437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 4712302 - 4712248
Alignment:
Q  33 aaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaatacc 87  Q
    ||||||||||| ||||||||||||||||| || |||||||||||| |||||||||    
T  4712302 aaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaatacc 4712248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 11021920 - 11021973
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttg 73  Q
    ||||||| ||||||||||||||||  |||||||||| |||||||||||||||||    
T  11021920 tttacaaagactaaaacaaaataccgaggaccaaaatcaaattttttatatttg 11021973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 989211 - 989101
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||| ||||||||||| ||||| ||||||||| |||||||||||| |||| ||||| |||       |||| ||||||| |||||||| |||    
T  989211 tttacaaggactgaaacaaaatac-aaggatcaaaaccaatttttttatatttacagg-actaaaaccaaaaaaatatttttacagg-actaaaaccaaa 989115  T
Q  120 atgtcaaatatttg 133  Q
    |||||| |||||||    
T  989114 atgtcagatatttg 989101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 9301816 - 9301871
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| || ||||||||||    
T  9301816 tttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgca 9301871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 13493131 - 13493194
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| | ||| ||||||||||| || |||||||||||| |||||    
T  13493131 tttacaaggattaaaacaaaataccatggatcaaaaccaaatattctatatttgcagggactaa 13493194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 16960011 - 16960066
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || ||| ||||||    
T  16960011 tttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgca 16960066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 39385408 - 39385471
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| |||||||| |||| || ||| |||||||||| ||||||||||||||| |||||    
T  39385408 tttacaaggattaaaacaatataccaaagacaaaaaccaaatattttatatttgcagggactaa 39385471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 46481053 - 46480990
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||| || ||||||||||||| ||||||||||||||||| || |||||||| ||| |||||    
T  46481053 tttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggactaa 46480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 16491783 - 16491726
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||| ||||| ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  16491783 tttataaggattaaaataaaataccaaggaccaaaaccaaatattctatatttgcagg 16491726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 6100561 - 6100608
Alignment:
Q  28 gactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||||||||| |||||||||||  ||||||| ||||||||||    
T  6100561 gactaaaacaaaataccaaggaccaaaatgaaattttctatatttgca 6100608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 20045927 - 20045875
Alignment:
Q  31 taaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| || || ||||||||| |||| || ||||||||||||||||||    
T  20045927 taaaacaaaacaccaaagaccaaaactaaatattatatatttgcaggaactaa 20045875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 26314733 - 26314785
Alignment:
Q  31 taaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||||||||| ||||| | ||||||||| || |||||||||||| |||||    
T  26314733 taaaacaaaataccaaggatctaaaccaaatattctatatttgcagggactaa 26314785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 17109987 - 17109872
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||||| | | |||||| |||    
T  17109987 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaggcactaaaaccaaaaaaatatttttacaaggattaaaaccaaa 17109888  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  17109887 atgtcagatatttgca 17109872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 49500090 - 49500205
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||       |||| ||||||| |||||||| |||    
T  49500090 tttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 49500189  T
Q  120 atgtcaaatatttgca 135  Q
    || |||||||||||||    
T  49500190 atatcaaatatttgca 49500205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 50645719 - 50645831
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||       |||| ||| ||| |||||||| |||    
T  50645719 tttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaactaaa 50645818  T
Q  120 atgtcaaatattt 132  Q
    |||||| ||||||    
T  50645819 atgtcagatattt 50645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 52835792 - 52835855
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  52835792 tttacaaggactaaaacaaaatacgaaggaccaaaaccaaattttttatatttgcagggactaa 52835855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 29838430 - 29838374
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29838430 tttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgcag 29838374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 889264 - 889201
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  889264 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttacgggaactaa 889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 14545972 - 14545853
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaatt-ttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaa 118  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| | |       || | ||||| | |||||||| ||    
T  14545972 tttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttatatttgcagggactaaaatcaaaaaaatacttttacatggactaaaaccaa 14545873  T
Q  119 aatgtcaaatatttgcaagg 138  Q
    ||||||| ||||||||||||    
T  14545872 aatgtcagatatttgcaagg 14545853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 32315512 - 32315397
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||| | |       |||| ||||||  |||||||| |||    
T  32315512 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcaaggactaaaatcaaaaaaatatttttacagagactaaaaccaaa 32315413  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  32315412 atgtcagatatttgca 32315397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 42093531 - 42093420
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||| |||       |||| ||||||| |||||| | |||    
T  42093531 tttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagagactaaaaccaaaaaaatatttttacagggactaaatccaaa 42093432  T
Q  120 atgtcaaatatt 131  Q
    |||||| |||||    
T  42093431 atgtcagatatt 42093420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 46962718 - 46962603
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||       | || ||||||| |||||||| |||    
T  46962718 tttacagggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaattttttttacagggactaaaaccaaa 46962619  T
Q  120 atgtcaaatatttgca 135  Q
    || ||| |||||||||    
T  46962618 atatcagatatttgca 46962603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 26582748 - 26582635
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  26582748 tttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcagg-actaacaccaacaaaatatttttacagggactaaaaccaaa 26582650  T
Q  120 atgtcaaatatttgc 134  Q
    || ||| ||||||||    
T  26582649 atatcagatatttgc 26582635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 27285106 - 27284991
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| ||||| |||       |||| ||| |||||||||||  |||    
T  27285106 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttataggaactaaaatcaaa 27285007  T
Q  120 atgtcaaatatttgca 135  Q
    ||| || |||||||||    
T  27285006 atgccagatatttgca 27284991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 14546083 - 14546146
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  14546083 tttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgcagggactaa 14546146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 33162456 - 33162393
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||| |||||    
T  33162456 tttacaaggactaaaacaaaataccaaggatcaaaaccaaatttttttaatttgcagggactaa 33162393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 38807793 - 38807897
Alignment:
Q  28 gactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaaatgtcaaa 127  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||  ||||||||| |    
T  38807793 gactaaaataaaatacagaggaccaaaaccaaattttttatatttgcagggactaaaaccaaacatatatttttacagggactaaaatcaaaatgtcaga 38807892  T
Q  128 tattt 132  Q
    |||||    
T  38807893 tattt 38807897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 49499979 - 49499916
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  49499979 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggactaa 49499916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 52835681 - 52835618
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  52835681 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 52835618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 26582859 - 26582974
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| || |||||||||||| ||||| | |       |||| ||||||| |||||||  |||    
T  26582859 tttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaaaatcaaaaaaatatttttacagggactaaaatcaaa 26582958  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  26582959 atgtcagatatttgca 26582974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 27285216 - 27285279
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||| |||||||||||||||  || ||||||||||||| |||||||||||||||| |||||    
T  27285216 tttacaaagactaaaacaaaatatcaatgaccaaaaccaaactttttatatttgcagggactaa 27285279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 27934587 - 27934524
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||| ||| |||||    
T  27934587 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgaagggactaa 27934524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 38807674 - 38807611
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| | ||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  38807674 tttacaaggattgaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 38807611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 42093642 - 42093699
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| || ||||||||||||    
T  42093642 tttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagg 42093699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 46962829 - 46962886
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagg 77  Q
    |||||||||| ||||||||||||| ||| ||||||||||||| || ||||||||||||    
T  46962829 tttacaaggattaaaacaaaataccaagaaccaaaaccaaatattctatatttgcagg 46962886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 55092454 - 55092510
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    ||||||| || |||||||| |||| ||||||||||| ||||||||||||||||||||    
T  55092454 tttacaatgattaaaacaatataccaaggaccaaaatcaaattttttatatttgcag 55092510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 7029521 - 7029458
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| |||||||||||||  | |||||||||||||| || |||||||||||| |||||    
T  7029521 tttacaaggattaaaacaaaataccgaagaccaaaaccaaatattctatatttgcagggactaa 7029458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 16056484 - 16056421
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||  || |||||||||||||| || |||||||||||| |||||    
T  16056484 tttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaa 16056421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 27934698 - 27934761
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||  ||||||||||||||||   ||||||||| |||| |||||    
T  27934698 tttacaaggactaaaacaaaataacaaggaccaaaaccaaaaaatttatatttacagggactaa 27934761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 50645608 - 50645553
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || ||| ||||||    
T  50645608 tttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgca 50645553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 55092343 - 55092288
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||  ||||||||||||||||| || ||||||||||    
T  55092343 tttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgca 55092288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 32315623 - 32315676
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttg 73  Q
    ||||||| || ||||||||||||| ||||||||||||||||| || ||||||||    
T  32315623 tttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctatatttg 32315676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 21323135 - 21323198
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||| ||||| ||||||||||||| |||||  |||||||||| || |||||||||||| |||||    
T  21323135 tttataaggattaaaacaaaataccaaggattaaaaccaaatattctatatttgcagggactaa 21323198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 29838541 - 29838596
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||| |||||||||||| |||| || ||| ||||||    
T  29838541 tttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatttttgca 29838596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 33162567 - 33162622
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||| ||||||||  ||||||||||||||||| || ||||||||||    
T  33162567 tttacaaggattaacacaaaatatcaaggaccaaaaccaaatattctatatttgca 33162622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 49121852 - 49121797
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    ||||||| || ||||||||||||  |||||||||||| |||| |||||||||||||    
T  49121852 tttacaatgattaaaacaaaatatcaaggaccaaaactaaatattttatatttgca 49121797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 20061934 - 20061819
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  20061934 tttacaaggagtaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 20061835  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  20061834 atgtcagatatttgca 20061819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 28031894 - 28032009
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||        |||| ||||||| |||||||| |||    
T  28031894 tttacaaggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaaccaaa 28031993  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  28031994 atgtcagatatttgca 28032009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 43191792 - 43191677
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  43191792 tttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaactaaa 43191693  T
Q  120 atgtcaaatatttgca 135  Q
    || ||| |||||||||    
T  43191692 atatcagatatttgca 43191677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 50625013 - 50625126
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||       | || ||||||| |||||||| |||    
T  50625013 tttacagggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc--aaatttttttttacagggactaaaaccaaa 50625110  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  50625111 atgtcagatatttgca 50625126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 42154997 - 42155108
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||       |||| |||||||| ||||||| |||    
T  42154997 tttataaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaacc-aaaaaatatttttacaggatctaaaaccaaa 42155095  T
Q  120 atgtcaaatattt 132  Q
    |||||| ||||||    
T  42155096 atgtcagatattt 42155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 50096269 - 50096154
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| || |||||||||||| ||||| |||       |||| ||||||| |||||||| |||    
T  50096269 tttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaaa 50096170  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  50096169 atgtcagatatttgca 50096154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 33804 - 33917
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||  | ||| |||       |||| ||||||| |||||||| |||    
T  33804 tttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttacagagaataaaaccaaaaaaatatttttacagggactaaaaccaaa 33903  T
Q  120 atgtcaaatatttg 133  Q
    |||||| |||||||    
T  33904 atgtcagatatttg 33917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 10914021 - 10914126
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |||       |||| ||||| | |||||||| |||    
T  10914021 tttacaaggactgaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaaccaaaaaaatatttttacacggactaaaaccaaa 10914120  T
Q  120 atgtca 125  Q
    ||||||    
T  10914121 atgtca 10914126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 14602257 - 14602320
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||    
T  14602257 tttacaaggactaaaacaaaataacaaggaccaaaaccaatttttttatatttgcagggactaa 14602320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 47829209 - 47829272
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||    
T  47829209 tttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttgcagggactaa 47829272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 50096380 - 50096443
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||||    
T  50096380 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgtagggactaa 50096443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 39288290 - 39288233
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaacc-aaattttttatatttgcag 76  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  39288290 tttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttatatttgcag 39288233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 33693 - 33637
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  33693 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcag 33637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 39027606 - 39027505
Alignment:
Q  31 taaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaaatgtcaaatat 130  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| |||       |||| ||||||| |||||||  ||||||||| ||||    
T  39027606 taaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaagcaaaatgtcagatat 39027507  T
Q  131 tt 132  Q
    ||    
T  39027506 tt 39027505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 12322339 - 12322402
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||  ||||||||| |||||    
T  12322339 tttacaaggactaaaacaaaatatcaaggaccaaaaccaaatttttttaatttgcagggactaa 12322402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 20062045 - 20062108
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  20062045 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 20062108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 26244796 - 26244859
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||| |||||    
T  26244796 tttacaatgactaaaacaaaataccaaggatcaaaaccaaattttctatatttgcagggactaa 26244859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 43191903 - 43191966
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||||||  |||||||||||| ||||||||||||||||| || ||||||||||||||||||    
T  43191903 tttacaaggatcaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaggaactaa 43191966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 50624902 - 50624839
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  50624902 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 50624839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 26244685 - 26244570
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| |||||| |||||| ||||||||||| ||||| || |||||||||||| |||||  ||       |||| ||||||| |||||||| |||    
T  26244685 tttacaaggattaaaactaaataccaaggaccaaaatcaaatattctatatttgcagggactaaatccaaaaaaatatttttacagggactaaaaccaaa 26244586  T
Q  120 atgtcaaatatttgca 135  Q
    |||||| |||||||||    
T  26244585 atgtcagatatttgca 26244570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 37172384 - 37172269
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||| ||| ||||| | |       |||| ||||||| |||||||| |||    
T  37172384 tttacaaggattaaaacaaaataccaaggatcaaaatcaaattttttatatttgaagggactaaaatcaaaaatatatttttacagggactaaaaccaaa 37172285  T
Q  120 atgtcaaatatttgca 135  Q
    ||| || |||||||||    
T  37172284 atgacagatatttgca 37172269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 14602146 - 14602083
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| || |||||||||||| |||||    
T  14602146 tttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaa 14602083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 28031783 - 28031720
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||  ||||||||||||||||| || |||||||||||| |||||    
T  28031783 tttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattatatatttgcagggactaa 28031720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 33619143 - 33619206
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||| ||| |||||    
T  33619143 tttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgtagggactaa 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 42154886 - 42154823
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| |||||||||||| |||| || |||||||||||| |||||    
T  42154886 tttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaa 42154823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 47829098 - 47829035
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||| ||||||| ||||||||||||||||| || |||||||||||| |||||    
T  47829098 tttacaaggattaaaagaaaataccaaggaccaaaaccaaatattctatatttgcagggactaa 47829035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 33619032 - 33618976
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcag 76  Q
    ||||||| ||| |||||||||||| || |||||||||||||| ||||||||||||||    
T  33619032 tttacaaagacgaaaacaaaataccaacgaccaaaaccaaatattttatatttgcag 33618976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 51999611 - 51999559
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatattt 72  Q
    |||||||||||||||||||||||  |||||  |||||||||||||||||||||    
T  51999611 tttacaaggactaaaacaaaatatcaaggattaaaaccaaattttttatattt 51999559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 10913910 - 10913847
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||  || |||||||||||||| || |||||||||||| |||||    
T  10913910 tttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaa 10913847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 12322228 - 12322161
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaatacc 87  Q
    |||||||||| |||||||| ||||  |||||||||||||||| || |||||||| ||| |||||||||    
T  12322228 tttacaaggattaaaacaatatacctaggaccaaaaccaaatattctatatttgtagggactaatacc 12322161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 18963745 - 18963690
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||| ||||||||||||  || |||||||||||||| || ||||||||||    
T  18963745 tttacaaggattaaaacaaaataacaatgaccaaaaccaaatattctatatttgca 18963690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 37172495 - 37172558
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||| || ||||||||||||| || |||||||||||||| || |||||| ||||| |||||    
T  37172495 tttacaatgattaaaacaaaataccaaagaccaaaaccaaatattctatattcgcagggactaa 37172558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 39288401 - 39288442
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaat 61  Q
    ||||||| || ||||||||||||| |||||||||||||||||    
T  39288401 tttacaaagattaaaacaaaataccaaggaccaaaaccaaat 39288442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 8678 - 8615
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  8678 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 8615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 8789 - 8852
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    ||||||| || ||||||||||||| ||||| ||||||||||| || |||||||||||| |||||    
T  8789 tttacaaagattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaa 8852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 36901 - 36838
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  36901 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaa 36838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 37012 - 37052
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaa 60  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  37012 tttacaaggattaaaacaaaataccaaggaccaaaaccaaa 37052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 118279 - 118394
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||       |||| ||||||| || ||||| |||    
T  118279 tttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaatatttttacagggacgaaaaccaaa 118378  T
Q  120 atgtcaaatatttgca 135  Q
    || ||| |||||||||    
T  118379 atatcagatatttgca 118394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 74161 - 74224
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  74161 tttacaaggactaaaacaaaataccaaggaccaaagccaaattttttatatttgcagggactaa 74224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 74051 - 74005
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaatttttt 66  Q
    |||| ||||| ||||||||||||| ||||||||||||||||| ||||    
T  74051 tttataaggattaaaacaaaatacgaaggaccaaaaccaaatatttt 74005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 212548 - 212434
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||  ||||||||| ||| | |||       |||| ||||||| |||||||| |||    
T  212548 tttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttaatttgcagggacttaaaccaaaaaaatatttttacagggactaaaaccaaa 212449  T
Q  120 atgtcaaatatttgc 134  Q
    |||||  ||||||||    
T  212448 atgtctgatatttgc 212434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 212659 - 212722
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| || |||||||||||||| || |||||||||||| |||||    
T  212659 tttacaaggattaaaacaaaatacgaaagaccaaaaccaaatattctatatttgcagggactaa 212722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 4634 - 4697
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||| |||||    
T  4634 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggactaa 4697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 25259 - 25147
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaataccnnnnnnntattgttacaggaactaaaacaaaa 119  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||||||| |||| ||||| |||       |||| ||| ||| |||||||| |||    
T  25259 tttacaaggattaaaacaaaatacgaaggaccaaaaccaaatattctatatttacagggactaaaaccaaaaaaatatttttatagggactaaaaccaaa 25160  T
Q  120 atgtcaaatattt 132  Q
    | |||||||||||    
T  25159 acgtcaaatattt 25147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 25358 - 25421
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||||||||| ||||||| ||||||||||||||||  ||||  ||||||||| |||||    
T  25358 tttacaaggactaaaataaaataccaaggaccaaaaccaaaaatttttaatttgcagggactaa 25421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 36241 - 36304
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcaggaactaa 83  Q
    |||||||||| ||||||||||||| ||||| ||||||||||| || ||||||||||||||||||    
T  36241 tttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcaggaactaa 36304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 36130 - 36075
Alignment:
Q  20 tttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgca 75  Q
    |||||||||||||||||||||||  || |||||||| |||||||||||||||||||    
T  36130 tttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgca 36075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University