View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15669_high_6 (Length: 336)
Name: NF15669_high_6
Description: NF15669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15669_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 11 - 322
Target Start/End: Original strand, 25640734 - 25641060
Alignment:
| Q |
11 |
caaaggaagctcagatcagattgggataaaatataaaaagtattatggcgaccacttgaccacatgatttcagccccaagaaattcaacttttgacttct |
110 |
Q |
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| T |
25640734 |
caaaggaagctcagatcagattgggataaaatataaaaagtattatggcgaccacttgaccacatgattccagccccaagaaattcaacttttgactttt |
25640833 |
T |
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| Q |
111 |
ttcaaagcaagtaattaaagtggtccaatcataagcaagtaacttagtcattcacacttaaccattataactcatgtgacaagtgatgaaaaggttaaaa |
210 |
Q |
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| T |
25640834 |
ttcaaagcaagtaattaaagtggtccaatcataagcaagtaacttagtcattcacacttaaccattataactcatgtgacaagtgatgaaaaggttaaaa |
25640933 |
T |
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| Q |
211 |
gagagtgcacagtgtcatatgaaggtgcaatatgatggccttacttagcaaacaa---------------ggaaggaaacctaacgttgaagaacgaatt |
295 |
Q |
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| T |
25640934 |
gagagtgcacagtgtcatatgaaggtgcaatatgatggccttacttagcaaacaaggaaggaaatcaagtggaaggaaacctaacgttgaagaacgaatt |
25641033 |
T |
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| Q |
296 |
ttattggttcaaggagtggcaagaaac |
322 |
Q |
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| T |
25641034 |
ttattggttcaaggagtggcaagaaac |
25641060 |
T |
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