View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1567-INSERTION-7 (Length: 89)
Name: NF1567-INSERTION-7
Description: NF1567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1567-INSERTION-7 |
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Alignment Details
Target: chr5 (Bit Score: 75; Significance: 4e-35; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 75; E-Value: 4e-35
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 2361645 - 2361567
Alignment:
| Q |
8 |
accaaaacaaccatttccaaaaatagtaagaataactgtcacagacaatgatgctacagattgtaccagcgacgaagaa |
86 |
Q |
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| T |
2361645 |
accaaaacaaccatttccaaaaatagtaagaataactgtcacagacaatgatgctacagattgttccagcgacgaagaa |
2361567 |
T |
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Target: chr6 (Bit Score: 70; Significance: 4e-32; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 70; E-Value: 4e-32
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 8861240 - 8861317
Alignment:
| Q |
9 |
ccaaaacaaccatttccaaaaatagtaagaataactgtcacagacaatgatgctacagattgtaccagcgacgaagaa |
86 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
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| T |
8861240 |
ccaaaacaaccatttccaaaaatagtaagaataactgtcacagacaatgatgctacagattattccagcgacgaagaa |
8861317 |
T |
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