View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15672_high_5 (Length: 574)

Name: NF15672_high_5
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15672_high_5
NF15672_high_5
[»] chr3 (24 HSPs)
chr3 (17-560)||(50802797-50803340)
chr3 (17-560)||(50872537-50873080)
chr3 (20-99)||(16342231-16342310)
chr3 (20-99)||(23194764-23194843)
chr3 (20-99)||(50741948-50742027)
chr3 (17-99)||(55294378-55294460)
chr3 (31-99)||(51248879-51248947)
chr3 (20-99)||(11597560-11597639)
chr3 (20-99)||(18741828-18741907)
chr3 (20-99)||(21699187-21699266)
chr3 (20-99)||(35087438-35087517)
chr3 (20-99)||(52462531-52462610)
chr3 (20-99)||(6103726-6103805)
chr3 (20-99)||(8243066-8243145)
chr3 (20-99)||(49113640-49113719)
chr3 (36-99)||(50770863-50770926)
chr3 (17-99)||(48520637-48520719)
chr3 (25-97)||(40824275-40824347)
chr3 (20-99)||(54513357-54513439)
chr3 (20-99)||(31368615-31368694)
chr3 (20-86)||(2843523-2843589)
chr3 (20-99)||(32756089-32756168)
chr3 (52-99)||(48977259-48977306)
chr3 (20-88)||(54934392-54934460)
[»] chr7 (23 HSPs)
chr7 (358-560)||(19058566-19058762)
chr7 (20-99)||(33638278-33638357)
chr7 (17-99)||(17470311-17470393)
chr7 (17-99)||(17582821-17582903)
chr7 (17-99)||(27734650-27734732)
chr7 (20-99)||(17478493-17478572)
chr7 (20-99)||(17482928-17483007)
chr7 (20-99)||(17570207-17570286)
chr7 (20-99)||(17574642-17574721)
chr7 (20-99)||(42688134-42688213)
chr7 (25-99)||(23299332-23299406)
chr7 (20-99)||(47175042-47175121)
chr7 (29-97)||(41261992-41262060)
chr7 (20-99)||(11500439-11500518)
chr7 (36-99)||(14309434-14309497)
chr7 (20-99)||(19521729-19521808)
chr7 (20-99)||(42826961-42827040)
chr7 (17-99)||(9149904-9149986)
chr7 (20-99)||(33031440-33031517)
chr7 (20-99)||(8925514-8925593)
chr7 (20-99)||(23766043-23766122)
chr7 (25-88)||(42918454-42918517)
chr7 (40-99)||(5963276-5963336)
[»] chr2 (21 HSPs)
chr2 (400-483)||(3111368-3111451)
chr2 (21-99)||(18092323-18092401)
chr2 (487-560)||(3111637-3111710)
chr2 (20-88)||(42885996-42886064)
chr2 (20-99)||(11707225-11707304)
chr2 (20-99)||(33663398-33663477)
chr2 (20-99)||(33907842-33907921)
chr2 (20-99)||(36632652-36632731)
chr2 (20-96)||(30570150-30570226)
chr2 (20-95)||(19126286-19126361)
chr2 (36-99)||(26822231-26822294)
chr2 (20-99)||(26828110-26828189)
chr2 (17-99)||(5252945-5253027)
chr2 (20-99)||(16723951-16724030)
chr2 (20-99)||(19167460-19167539)
chr2 (20-99)||(21098300-21098379)
chr2 (20-99)||(35285893-35285972)
chr2 (14-99)||(27364432-27364517)
chr2 (14-99)||(45399398-45399483)
chr2 (36-99)||(11448342-11448405)
chr2 (31-99)||(1514598-1514666)
[»] chr8 (26 HSPs)
chr8 (25-99)||(6477086-6477160)
chr8 (20-99)||(5835916-5835995)
chr8 (20-99)||(41629209-41629288)
chr8 (20-99)||(22332315-22332394)
chr8 (20-99)||(38994004-38994083)
chr8 (20-99)||(42810521-42810600)
chr8 (20-99)||(44600021-44600100)
chr8 (17-99)||(23522245-23522327)
chr8 (31-99)||(33423858-33423926)
chr8 (20-99)||(3751434-3751513)
chr8 (20-99)||(9761588-9761667)
chr8 (20-99)||(14078418-14078497)
chr8 (20-99)||(38962489-38962568)
chr8 (20-99)||(38992833-38992912)
chr8 (25-99)||(27273552-27273626)
chr8 (25-99)||(41533452-41533526)
chr8 (25-99)||(44382393-44382467)
chr8 (20-99)||(22946388-22946467)
chr8 (20-99)||(30826714-30826793)
chr8 (20-99)||(42785489-42785568)
chr8 (36-99)||(19248435-19248498)
chr8 (36-99)||(19321619-19321682)
chr8 (20-99)||(19395150-19395229)
chr8 (20-99)||(36597623-36597702)
chr8 (20-99)||(41977819-41977898)
chr8 (25-99)||(45293164-45293239)
[»] chr5 (25 HSPs)
chr5 (20-99)||(3029297-3029376)
chr5 (31-99)||(21030651-21030719)
chr5 (20-99)||(3150202-3150281)
chr5 (20-99)||(7286219-7286298)
chr5 (20-99)||(34373982-34374061)
chr5 (17-99)||(1851555-1851637)
chr5 (17-99)||(17997110-17997192)
chr5 (17-99)||(38935004-38935086)
chr5 (20-88)||(20995495-20995563)
chr5 (31-99)||(27066414-27066482)
chr5 (20-99)||(10511963-10512042)
chr5 (20-99)||(12420195-12420274)
chr5 (20-99)||(26320675-26320754)
chr5 (25-97)||(19448539-19448611)
chr5 (31-99)||(35539533-35539601)
chr5 (20-99)||(41781383-41781463)
chr5 (20-99)||(2195707-2195786)
chr5 (20-99)||(4882814-4882893)
chr5 (20-99)||(20350477-20350556)
chr5 (17-99)||(20758487-20758569)
chr5 (20-99)||(3396734-3396813)
chr5 (20-99)||(33610738-33610817)
chr5 (20-99)||(30689855-30689934)
chr5 (20-99)||(33930356-33930435)
chr5 (17-99)||(33706369-33706451)
[»] scaffold0032 (2 HSPs)
scaffold0032 (20-99)||(11014-11093)
scaffold0032 (20-99)||(4565-4644)
[»] chr6 (22 HSPs)
chr6 (20-99)||(17940080-17940159)
chr6 (20-99)||(11933090-11933169)
chr6 (20-99)||(21800101-21800180)
chr6 (20-99)||(33321061-33321140)
chr6 (20-99)||(33814551-33814630)
chr6 (17-99)||(1072868-1072950)
chr6 (17-99)||(35041648-35041730)
chr6 (20-99)||(4425045-4425124)
chr6 (20-99)||(7222871-7222950)
chr6 (20-99)||(18598593-18598672)
chr6 (20-99)||(34856512-34856591)
chr6 (25-99)||(34321655-34321729)
chr6 (20-99)||(2521725-2521804)
chr6 (20-99)||(14887546-14887625)
chr6 (20-99)||(22373451-22373530)
chr6 (20-99)||(30044768-30044847)
chr6 (17-99)||(18312351-18312432)
chr6 (20-99)||(15276196-15276275)
chr6 (20-88)||(25540503-25540571)
chr6 (17-83)||(14832059-14832125)
chr6 (254-318)||(24237083-24237147)
chr6 (348-393)||(8743888-8743933)
[»] chr4 (27 HSPs)
chr4 (20-99)||(7643407-7643486)
chr4 (20-99)||(37701212-37701291)
chr4 (17-99)||(22115663-22115745)
chr4 (20-99)||(13628651-13628730)
chr4 (20-99)||(17699772-17699851)
chr4 (20-99)||(19831012-19831091)
chr4 (20-99)||(33502616-33502695)
chr4 (20-99)||(35495216-35495295)
chr4 (20-99)||(38008857-38008936)
chr4 (20-99)||(53343006-53343085)
chr4 (17-99)||(2776873-2776955)
chr4 (25-99)||(7847620-7847694)
chr4 (20-99)||(8531414-8531493)
chr4 (20-99)||(14829126-14829205)
chr4 (17-88)||(36514952-36515023)
chr4 (20-99)||(41983848-41983927)
chr4 (36-99)||(54331274-54331337)
chr4 (20-88)||(39742609-39742677)
chr4 (20-99)||(17740637-17740716)
chr4 (20-99)||(40622747-40622826)
chr4 (17-99)||(5271887-5271969)
chr4 (25-99)||(28973658-28973732)
chr4 (17-99)||(47557038-47557120)
chr4 (20-82)||(55998327-55998389)
chr4 (31-99)||(23479496-23479564)
chr4 (36-99)||(36857664-36857727)
chr4 (20-99)||(34056178-34056257)
[»] scaffold0079 (1 HSPs)
scaffold0079 (17-99)||(10332-10414)
[»] scaffold0242 (1 HSPs)
scaffold0242 (20-99)||(3020-3099)
[»] scaffold0115 (1 HSPs)
scaffold0115 (20-99)||(523-602)
[»] scaffold0110 (1 HSPs)
scaffold0110 (20-99)||(48836-48915)
[»] scaffold0010 (2 HSPs)
scaffold0010 (20-99)||(177035-177114)
scaffold0010 (26-99)||(120481-120554)
[»] chr1 (17 HSPs)
chr1 (20-99)||(48340899-48340978)
chr1 (20-99)||(50561633-50561712)
chr1 (17-99)||(44406944-44407026)
chr1 (20-99)||(18814803-18814882)
chr1 (20-99)||(34688171-34688250)
chr1 (32-99)||(38844807-38844874)
chr1 (25-99)||(41962521-41962595)
chr1 (20-94)||(52521205-52521279)
chr1 (20-99)||(12245482-12245561)
chr1 (20-99)||(31620273-31620352)
chr1 (20-99)||(34692699-34692778)
chr1 (36-99)||(41829654-41829717)
chr1 (17-99)||(52310418-52310500)
chr1 (20-99)||(10694411-10694490)
chr1 (20-99)||(17672034-17672113)
chr1 (20-99)||(45005354-45005433)
chr1 (31-83)||(16031229-16031281)
[»] scaffold1634 (1 HSPs)
scaffold1634 (20-99)||(633-712)
[»] scaffold0047 (1 HSPs)
scaffold0047 (20-99)||(25960-26039)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-99)||(10504-10583)
[»] scaffold0121 (1 HSPs)
scaffold0121 (35-99)||(14953-15017)
[»] scaffold0045 (1 HSPs)
scaffold0045 (20-99)||(12529-12608)
[»] scaffold0016 (1 HSPs)
scaffold0016 (36-99)||(101286-101349)
[»] scaffold0231 (1 HSPs)
scaffold0231 (254-318)||(3736-3800)
[»] scaffold0122 (1 HSPs)
scaffold0122 (20-74)||(5099-5153)


Alignment Details
Target: chr3 (Bit Score: 540; Significance: 0; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 540; E-Value: 0
Query Start/End: Original strand, 17 - 560
Target Start/End: Original strand, 50802797 - 50803340
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatgattgggaaacctcacaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50802797 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatgattggaaaacctcacaaa 50802896  T
Q  117 ccttatatcaatatatttcccttaatttgtattcaccaaccgtcttaatcccaagttggtaaaatatatgtccctgcagccaacatcattttttgtttac 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50802897 ccttatatcaatatatttcccttaatttgtattcaccaaccgtcttaatcccaagttggtaaaatatatgtccctgcagccaacatcattttttgtttac 50802996  T
Q  217 cttaaataacggtccaaattgtgtactttgcatttttaaaacttcaatagtcttagcttaatatctaaagagtacaatattagatgtagttagttgatta 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50802997 cttaaataacggtccaaattgtgtactttgcatttttaaaacttcaatagtcttagcttaatatctaaagagtacaatattagatgtagttagttgatta 50803096  T
Q  317 taaagataacgaaatgcaagcagaaagcaagataattacatttaacatacttaaccatagtaagttcattgcagcaatttgtgattagcattgaattgaa 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50803097 taaagataacgaaatgcaagcagaaagcaagataattacatttaacatacttaaccatagtaagttcattgcagcaatttgtgattagcattgaattgaa 50803196  T
Q  417 taagatgcaatcataattgaaatcatgatcttcataactaacttattacataccattatctcctttcctattgtcagctagatattatctgagtgtctag 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50803197 taagatgcaatcataattgaaatcatgatcttcataactaacttattacataccattatctcctttcctattgtcagctagatattatctgagtgtctag 50803296  T
Q  517 gaagcgaaaatatcacaactgtagctgaagaaaatgttcaaact 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  50803297 gaagcgaaaatatcacaactgtagctgaagaaaatgttcaaact 50803340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 540; E-Value: 0
Query Start/End: Original strand, 17 - 560
Target Start/End: Complemental strand, 50873080 - 50872537
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatgattgggaaacctcacaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50873080 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatgattggaaaacctcacaaa 50872981  T
Q  117 ccttatatcaatatatttcccttaatttgtattcaccaaccgtcttaatcccaagttggtaaaatatatgtccctgcagccaacatcattttttgtttac 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50872980 ccttatatcaatatatttcccttaatttgtattcaccaaccgtcttaatcccaagttggtaaaatatatgtccctgcagccaacatcattttttgtttac 50872881  T
Q  217 cttaaataacggtccaaattgtgtactttgcatttttaaaacttcaatagtcttagcttaatatctaaagagtacaatattagatgtagttagttgatta 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50872880 cttaaataacggtccaaattgtgtactttgcatttttaaaacttcaatagtcttagcttaatatctaaagagtacaatattagatgtagttagttgatta 50872781  T
Q  317 taaagataacgaaatgcaagcagaaagcaagataattacatttaacatacttaaccatagtaagttcattgcagcaatttgtgattagcattgaattgaa 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50872780 taaagataacgaaatgcaagcagaaagcaagataattacatttaacatacttaaccatagtaagttcattgcagcaatttgtgattagcattgaattgaa 50872681  T
Q  417 taagatgcaatcataattgaaatcatgatcttcataactaacttattacataccattatctcctttcctattgtcagctagatattatctgagtgtctag 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50872680 taagatgcaatcataattgaaatcatgatcttcataactaacttattacataccattatctcctttcctattgtcagctagatattatctgagtgtctag 50872581  T
Q  517 gaagcgaaaatatcacaactgtagctgaagaaaatgttcaaact 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  50872580 gaagcgaaaatatcacaactgtagctgaagaaaatgttcaaact 50872537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 16342310 - 16342231
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| |||||||||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  16342310 caaagaagtaacatcggtgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 16342231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 23194843 - 23194764
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||    
T  23194843 caaagaagtaacatcgatgagtgaagataatctaatctaggattagagataaggtgatctgttgaaagtgcggatcatga 23194764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 50742027 - 50741948
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  50742027 caaagaagtagcatcgatgagtgaagataatctagtctaggattagagttaaggtgatttgttgaaagtgcggatcatga 50741948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 55294378 - 55294460
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||||||| ||||||||||||||||||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  55294378 aaacaaagaagtaacattggtgagtgaagataatcttgtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 55294460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 51248947 - 51248879
Alignment:
Q  31 catcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  51248947 catcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 51248879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 11597560 - 11597639
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||| ||||||||||    
T  11597560 caaagaagtagcattggtgagtgaagataatcttgtctaagattagagttaaggtgatctgttgaaagtgcggatcatga 11597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 18741828 - 18741907
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |||| ||||| ||||||||||    
T  18741828 caaagaagtagcatcggtgagtgaagattatctagtctaagattagagttaaggtgatctgttaaaagtgcggatcatga 18741907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 21699187 - 21699266
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| ||||| ||||    
T  21699187 caaagaagtagcatcggtgagtgaagataatctagtctaagattagagttaaggtgatatgctgaaagtgcggattatga 21699266  T

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Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 35087438 - 35087517
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  35087438 caaagaagtagcatcagtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 35087517  T

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Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 52462531 - 52462610
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||    
T  52462531 caaagaagtagcatcagtgagtgaagataatccagtctaggattagagttaaggtgatatgttgaaagtacggatcatga 52462610  T

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Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 6103726 - 6103805
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| |||||||||| |||||||||||||||||| |||| ||||| |||||||||| | |||||||||| ||||||||||    
T  6103726 caaagaagtaacatcagtgagtgaagataatctagtctaggattaaagttaaggtggtatgttgaaagtgcggatcatga 6103805  T

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Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 8243145 - 8243066
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||| ||||||||||||| |||||||||| ||||||||||    
T  8243145 caaagaagtagcatcagtgagtgaagataatctagtctaggattggagttaaggtgatctgttgaaagtgcggatcatga 8243066  T

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Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 49113719 - 49113640
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||  |||||||||    
T  49113719 caaagaagtagcatcggtgattgaagataatctagtctaggattagagttaaggtgatttgttgcaagtgtggatcatga 49113640  T

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Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 50770863 - 50770926
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  50770863 gtgagtgaagataatctagtctacgattagagttaaggtgatctgttgaaagtgcggatcatga 50770926  T

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Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 48520637 - 48520719
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| ||| ||||||||||||||||||  |||  |||||||||||||||||| |||||||||| ||||||||||    
T  48520637 aaacaaagaagtagcattggtgagtgaagataatcttgtcttggattagagttaaggtgatctgttgaaagtgcggatcatga 48520719  T

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Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 40824275 - 40824347
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcat 97  Q
    ||||| ||||| ||||||||||||||||  ||| ||||||||||||||||||| |||||||||| ||||||||    
T  40824275 aagtagcatcgatgagtgaagataatcttgtctgagattagagttaaggtgatctgttgaaagtgcggatcat 40824347  T

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Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 54513439 - 54513357
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataat---ctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||   ||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  54513439 caaagaagtagcatcggtgagtgaagataataatctagtctaggattagagttaaggtgatatgttgaaagtgcggatcatga 54513357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 31368615 - 31368694
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| ||||||||||  |||||||||    
T  31368615 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgtggatcatga 31368694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 2843523 - 2843589
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaa 86  Q
    |||| ||||| |||||||||||||||| |||||| |||| |||||||||||||||||| || |||||    
T  2843523 caaagaagtagcatcggtgagtgaagacaatctagtctaggattagagttaaggtgatctgctgaaa 2843589  T

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Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 32756168 - 32756089
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| | || ||||||| |||| ||||| ||||||||||  |||||||||    
T  32756168 caaagaagtagcatcagtgagtgaagataatctagtataggattagaattaaagtgatatgttgaaagtgtggatcatga 32756089  T

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Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 48977306 - 48977259
Alignment:
Q  52 taatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  48977306 taatctaggattatagttaaggtgatctgttgaaagtacggatcatga 48977259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 54934460 - 54934392
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagt 88  Q
    |||| ||||| |||| |||||||||||||||||| | || ||||||| ||||||| || ||||||||||    
T  54934460 caaagaagtagcatcagtgagtgaagataatctagtatatgattagaattaaggtaatatgttgaaagt 54934392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 5e-82; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 358 - 560
Target Start/End: Complemental strand, 19058762 - 19058566
Alignment:
Q  358 ttaacatacttaaccatagtaagttcattgcagcaatttgtgattagcattgaattgaataagatgcaatcataattgaaatcatgatcttcataactaa 457  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||    
T  19058762 ttaaaatacttaatcatagtaagttcattgcagcaatttgtgattagcattgaat-----aagatgcaatcataattgaaatcatgatcttcataactaa 19058668  T
Q  458 cttattacataccattatctcctttcctattgtcagctagatattatctgagtgtctaggaagcgaaaatatcacaactgtagctgaagaaaatgttcaa 557  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19058667 cttattacatacc-ttatctcctttcttattgtcagctggatattatctgagtgtctaggaagcgaaaatatcacaactatagctgaagaaaatgttcaa 19058569  T

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Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 33638278 - 33638357
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| ||||||||||    
T  33638278 caaagaagtaacatcggtgagtgaagataatcttgtctaggattagagttaaggtgatttgttgaaagtgcggatcatga 33638357  T

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Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 17470393 - 17470311
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || |||||||    
T  17470393 aaacaaagaagtaacattggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcgaatcatga 17470311  T

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Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 17582821 - 17582903
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || |||||||    
T  17582821 aaacaaagaagtaacattggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcgaatcatga 17582903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 27734650 - 27734732
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| ||||||||||||||||||||||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  27734650 aaacaaagaagtagcatcggtgagtgaagataatcttgtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 27734732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17478572 - 17478493
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| ||||| ||||||||||||||||| |||| ||||||||||| |||| |||||||||||| ||||||||||    
T  17478572 caaataagtagcatcgatgagtgaagataatctagtctaggattagagttatggtgttttgttgaaagtgcggatcatga 17478493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17483007 - 17482928
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| ||||| ||||||||||||||||| |||| ||||||||||| |||| |||||||||||| ||||||||||    
T  17483007 caaataagtagcatcgatgagtgaagataatctagtctaggattagagttatggtgttttgttgaaagtgcggatcatga 17482928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 17570207 - 17570286
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| ||||| ||||||||||||||||| |||| ||||||||||| |||| |||||||||||| ||||||||||    
T  17570207 caaataagtagcatcgatgagtgaagataatctagtctaggattagagttatggtgttttgttgaaagtgcggatcatga 17570286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 17574642 - 17574721
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| ||||| ||||||||||||||||| |||| ||||||||||| |||| |||||||||||| ||||||||||    
T  17574642 caaataagtagcatcgatgagtgaagataatctagtctaggattagagttatggtgttttgttgaaagtgcggatcatga 17574721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 42688213 - 42688134
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| | || |||||||||||||||||| |||||||||| ||||||||||    
T  42688213 caaagaagtagcatcggtgagtgaagataatctagtttaggattagagttaaggtgatctgttgaaagtgcggatcatga 42688134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 23299332 - 23299406
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| ||||||||||||||||||||||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  23299332 aagtagcatcggtgagtgaagataatcttgtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 23299406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 47175121 - 47175042
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||| | ||||||||    
T  47175121 caaagaagtagcatcgatgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcagatcatga 47175042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 41261992 - 41262060
Alignment:
Q  29 aacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcat 97  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||||  |||||||    
T  41261992 aacatcggtgagtgaagataatctagtctaggattagagttaaagtgatctgttgaaagtgtggatcat 41262060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 11500518 - 11500439
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||| |||| | |||||| | ||||||||||    
T  11500518 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaagttgatctattgaaaatgcggatcatga 11500439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 14309497 - 14309434
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  14309497 gtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 14309434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 19521808 - 19521729
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| ||||  |||||||||||||||||  ||||||||| ||||||||||    
T  19521808 caaagaagtagcatctgtgagtgaagataatctagtctagaattagagttaaggtgatccgttgaaagtgcggatcatga 19521729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 42826961 - 42827040
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| | || ||||||| |||||||||| |||||||||| ||||||||||    
T  42826961 caaagaagtagcatcagtgagtgaagataatctagtataggattagaattaaggtgatctgttgaaagtgcggatcatga 42827040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 9149986 - 9149904
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| ||||||||||||||||||||||  |||| ||||||| |||||||| | |||||||||| | ||||||||    
T  9149986 aaacaaagaagtagcatcggtgagtgaagataatcttgtctaggattagaattaaggtggtatgttgaaagtgcagatcatga 9149904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33031517 - 33031440
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| ||||||||||||||||||||  | |  |||||||||||||||||||| |||||||||| | ||||||||    
T  33031517 caaataagtagcatcggtgagtgaagataat--agttcaagattagagttaaggtgatatgttgaaagtgcagatcatga 33031440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 8925514 - 8925593
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||| ||||||| |||| ||||| |||||||||||| ||||||||||  |||||||||    
T  8925514 caaagaagtagcatcagtgagtgaagctaatctagtctaggattaaagttaaggtgatatgttgaaagtgtggatcatga 8925593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 23766043 - 23766122
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||  ||||| ||||| |||||||||| ||||||||||    
T  23766043 caaagaagtagcatcagtgagtgaagataatctagtctaggattaatgttaaagtgatatgttgaaagtgcggatcatga 23766122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 42918517 - 42918454
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagt 88  Q
    ||||| ||||||||||||||||||||||  |||| |||||||||||||||| | ||||||||||    
T  42918517 aagtagcatcggtgagtgaagataatcttgtctaggattagagttaaggtggtctgttgaaagt 42918454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 5963336 - 5963276
Alignment:
Q  40 gtgaagataatctaatctaagattagagttaaggtgatttgttgaaa-gtacggatcatga 99  Q
    |||||||||||||| | || |||||||||||||||||| |||||||| || ||||||||||    
T  5963336 gtgaagataatctagtataggattagagttaaggtgatatgttgaaaggtgcggatcatga 5963276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 483
Target Start/End: Original strand, 3111368 - 3111451
Alignment:
Q  400 attagcattgaattgaataagatgcaatcataattgaaatcatgatcttcataactaacttattacataccattatctcctttc 483  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  3111368 attagcattgaattgaataagatgcaatcataattggaatcatgatcttcataattaatttattacataccataatctcctttc 3111451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 18092323 - 18092401
Alignment:
Q  21 aaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||  |||||||||    
T  18092323 aaataagtagcatcggtgagtgaagataatcttatctaggattagagttaaggtgatctgttgaaagtgtggatcatga 18092401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 487 - 560
Target Start/End: Original strand, 3111637 - 3111710
Alignment:
Q  487 ttgtcagctagatattatctgagtgtctaggaagcgaaaatatcacaactgtagctgaagaaaatgttcaaact 560  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  3111637 ttgtgagctggatattatctgagtgtctaggaagcgaaaatatctcaattgtagctgaagaagatgttcaaact 3111710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 42886064 - 42885996
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagt 88  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  42886064 caaagaagtagcatcggtgagtgaagataatctaatctaggattagagttaaggtgatctgttgaaagt 42885996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 11707304 - 11707225
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  11707304 caaagaagtagcatcggtgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 11707225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 33663398 - 33663477
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||| ||||    
T  33663398 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgattcgttgaaagtgcggattatga 33663477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33907921 - 33907842
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  33907921 caaagaagtagcatcggtgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 33907842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 36632652 - 36632731
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||  |||||||||    
T  36632652 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgaggatcatga 36632731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 30570150 - 30570226
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatca 96  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||||||    
T  30570150 caaagaagtagcatcagtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatca 30570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 19126286 - 19126361
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatc 95  Q
    |||| |||||||||| |||||||||||||||||  |||| |||||||||||||||||| |||||||||| ||||||    
T  19126286 caaagaagtaacatcagtgagtgaagataatcttgtctaggattagagttaaggtgatctgttgaaagtgcggatc 19126361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 26822294 - 26822231
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  26822294 gtgagtgaagataatctagtctacgattagagttaaggtgatctgttgaaagtgcggatcatga 26822231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 26828189 - 26828110
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| ||||| || |||| |||||||||||||||||| |||||||||| ||||||||||    
T  26828189 caaagaagtagcatcggtgagtgaatataatttagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 26828110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 5253027 - 5252945
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||||||| ||||||||||||||||||| |||| ||| |||||||||||||| | |||||||| || |||||||    
T  5253027 aaacaaagaagtaacattggtgagtgaagataatctagtctaggatcagagttaaggtgatctcttgaaagtgcgaatcatga 5252945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 16723951 - 16724030
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||  ||||||||||| |||||||||| ||||||||||    
T  16723951 caaagaagtagcatcagtgagtgaagataatctagtctaggattaatgttaaggtgatatgttgaaagtgcggatcatga 16724030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 19167460 - 19167539
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||||||||| |||||||||||||||||  |||  ||||||||||||||||| |||||||||| ||||| ||||    
T  19167460 caaagaagtaacatcgatgagtgaagataatctagcctagaattagagttaaggtgatctgttgaaagtgcggataatga 19167539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 21098379 - 21098300
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||| ||||| |||||||||| ||||||||||    
T  21098379 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaatgtgatatgttgaaagtgcggatcatga 21098300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 35285893 - 35285972
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| |||| |||||||||||||||||| | || ||||||| |||||||||| ||||||| || ||||||||||    
T  35285893 caaataagtagcatcagtgagtgaagataatctagtatatgattagaattaaggtgatatgttgaacgtgcggatcatga 35285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 27364432 - 27364517
Alignment:
Q  14 atgaaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| |||| ||||| |||  |||||||||||||||||| | || ||||||| |||||||||| |||||||||| ||||||||||    
T  27364432 atgaagcaaaaaagtagcattagtgagtgaagataatctagtataggattagaattaaggtgatctgttgaaagtgcggatcatga 27364517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 45399483 - 45399398
Alignment:
Q  14 atgaaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| |||| ||||| |||  |||||||||||||||||| | || ||||||| |||||||||| |||||||||| ||||||||||    
T  45399483 atgaagcaaagaagtagcattagtgagtgaagataatctagtataggattagaattaaggtgatctgttgaaagtgcggatcatga 45399398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 11448405 - 11448342
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||| |||| | |||||||||||||||| ||||||||||  |||||||||    
T  11448405 gtgagtgaagataatctagtctagggttagagttaaggtgatctgttgaaagtggggatcatga 11448342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 1514598 - 1514666
Alignment:
Q  31 catcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||||| |  | || ||||| |||||||||||| |||||||||| ||||||||||    
T  1514598 catcggtgagtgaagataattttgtttaggattaaagttaaggtgatctgttgaaagtccggatcatga 1514666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 6477086 - 6477160
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  6477086 aagtagcatcggtgagtgaagataatctaatctaggattagagttaaggtgatttgttgaaagtgcggatcatga 6477160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 5835995 - 5835916
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||    
T  5835995 caaagaagtaacatcagtgagtgaagataatctgatctatgattagagttaaggtgatatgttgaaagtgcggatcatga 5835916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 41629288 - 41629209
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  41629288 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 41629209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 22332315 - 22332394
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  22332315 caaagaagtagcatcggtgactgaagataatctagtctaggattagagttaaggtgatatgttgaaagtgcggatcatga 22332394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 38994083 - 38994004
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  38994083 caaagaagtagcatcggtgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 38994004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 42810521 - 42810600
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||| ||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  42810521 caaagaagtagcatcggtgagtgaggataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 42810600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 44600100 - 44600021
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  44600100 caaagaagtagcatcggtgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 44600021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 23522245 - 23522327
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||||||||  ||||||||||||||||| |||| |||||||||||||||||| |||||||||| || |||||||    
T  23522245 aaacaaagaagtaacatcattgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcgaatcatga 23522327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 33423858 - 33423926
Alignment:
Q  31 catcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  33423858 catcggtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 33423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 3751513 - 3751434
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| |||||||||||||||||| ||||||||||  |||||||||    
T  3751513 caaagaagtagcatcggtgagtgaagataatcttgtctaggattagagttaaggtgatatgttgaaagtgtggatcatga 3751434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 9761667 - 9761588
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||| | |||||||| ||||||||||    
T  9761667 caaagaagtagcatcagtgagtgaagataatctagtctacgattagagttaaggtgatctattgaaagtgcggatcatga 9761588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 14078418 - 14078497
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| |||||||||| |||||| ||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  14078418 caaagaagtaacatcagtgagtaaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 14078497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 38962568 - 38962489
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||| ||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  38962568 caaagaagtagcatcagtgagtgaaggtaatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 38962489  T

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Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 38992912 - 38992833
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||| ||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  38992912 caaagaagtagcatcagtgagtgaaggtaatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 38992833  T

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Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 27273626 - 27273552
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| |||| |||||||||||||||||| ||||  ||||||||||||||||| |||||||||| ||||||||||    
T  27273626 aagtagcatcagtgagtgaagataatctagtctagaattagagttaaggtgatctgttgaaagtgcggatcatga 27273552  T

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Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 41533452 - 41533526
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||||||||||||| || |||||||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  41533452 aagtaacatcggtgagtaaaaataatcttgtctaggattagagttaaggtgatatgttgaaagtgcggatcatga 41533526  T

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Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 44382393 - 44382467
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| |||||||||||||| |||||||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  44382393 aagtagcatcggtgagtgaatataatcttgtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 44382467  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 22946388 - 22946467
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| |||| |||||||||||||||||| | || ||||||| |||||||||| ||||||| || ||||||||||    
T  22946388 caaataagtagcatcagtgagtgaagataatctagtatatgattagaattaaggtgatatgttgaacgtgcggatcatga 22946467  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 30826793 - 30826714
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| | || ||||| |||||||||||| |||||||||| ||||||||||    
T  30826793 caaagaagtagcatcagtgagtgaagataatctagtataggattaaagttaaggtgatatgttgaaagtgcggatcatga 30826714  T

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Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 42785568 - 42785489
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| | |||||||| ||||||||||    
T  42785568 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatctattgaaagtgcggatcatga 42785489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 19248498 - 19248435
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||  |||| |||||||||||||||||| ||||||||||  |||||||||    
T  19248498 gtgagtgaagataatctcgtctaggattagagttaaggtgatctgttgaaagtgtggatcatga 19248435  T

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Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 19321682 - 19321619
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||  |||| |||||||||||||||||| ||||||||||  |||||||||    
T  19321682 gtgagtgaagataatctcgtctaggattagagttaaggtgatctgttgaaagtgtggatcatga 19321619  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 19395150 - 19395229
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||  ||||||||||||||| | || | ||||||||||||||||||| ||||||||| ||||||||||    
T  19395150 caaagaagtagcatcaatgagtgaagataatcgagtcaaggattagagttaaggtgattggttgaaagtgcggatcatga 19395229  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 36597623 - 36597702
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| | |  |||||||||||||||| | |||||||||| ||||||||||    
T  36597623 caaagaagtagcatcagtgagtgaagataatctagtatgggattagagttaaggtgctctgttgaaagtgcggatcatga 36597702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 41977898 - 41977819
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||| |||||||||  |||| |||||||||||||||| | |||||||| | ||||||||||    
T  41977898 caaagaagtagcatcggtgagtggagataatcttctctaggattagagttaaggtggtctgttgaaaatgcggatcatga 41977819  T

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Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 45293164 - 45293239
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagag-ttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| ||||||||||||||||||||||  |||| |||||||| |||||||||| | |||||||| ||||||||||    
T  45293164 aagtagcatcggtgagtgaagataatcttgtctaggattagagattaaggtgatctattgaaagtgcggatcatga 45293239  T

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Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 3029376 - 3029297
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  3029376 caaagaagtaacatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 3029297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 21030719 - 21030651
Alignment:
Q  31 catcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  21030719 catcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 21030651  T

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Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 3150202 - 3150281
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| | ||||||||    
T  3150202 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcagatcatga 3150281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 7286298 - 7286219
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  7286298 caaagaagtagcatcagtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 7286219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 34373982 - 34374061
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||    
T  34373982 caaagaagtagcatcggtgagtgaatataatctagtctagaattagagttaaggtgatctgttgaaagtacggatcatga 34374061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 1851555 - 1851637
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| |||||||||||||||||||| || |||| |||||||||||||||||| |||||||| | ||||||||||    
T  1851555 aaacaaacaagtagcatcggtgagtgaagataatgtagtctaggattagagttaaggtgatctgttgaaaatgcggatcatga 1851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 17997192 - 17997110
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| ||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || |||||||    
T  17997192 aaacaaagaagtatcattggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcgaatcatga 17997110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 38935086 - 38935004
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| |||||||||  ||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  38935086 aaacaaagaagtaacatatgtgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 38935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 20995495 - 20995563
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagt 88  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  20995495 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagt 20995563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 27066482 - 27066414
Alignment:
Q  31 catcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||||||||||||||||||| | || |||||||||||||||||| |||||||||| ||||||||||    
T  27066482 catcggtgagtgaagataatctagtataggattagagttaaggtgatatgttgaaagtgcggatcatga 27066414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 10511963 - 10512042
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||||| ||||||||| ||||||||||| |||| ||||||||||||||| || |||||||||| ||||||||||    
T  10511963 caaagaagtaacttcggtgagtaaagataatctagtctaggattagagttaaggtaatctgttgaaagtgcggatcatga 10512042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 12420195 - 12420274
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| |||||||||| |||||||||||||||||  |||| |||||||||||||||||| ||||||||||  |||||||||    
T  12420195 caaagaagtaacatcagtgagtgaagataatcttgtctaggattagagttaaggtgatctgttgaaagtgtggatcatga 12420274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 26320675 - 26320754
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  26320675 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 26320754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 19448611 - 19448539
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcat 97  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| || ||||||| | ||||||    
T  19448611 aagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgctgaaagtgcagatcat 19448539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 35539533 - 35539601
Alignment:
Q  31 catcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||||||| || |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  35539533 catcggtgagttaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 35539601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 41781463 - 41781383
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaag-attagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| | ||||||||||||||||| |||||||||| ||||||||||    
T  41781463 caaagaagtagcatcagtgagtgaagataatctagtctagggattagagttaaggtgatatgttgaaagtgcggatcatga 41781383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 2195786 - 2195707
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||  ||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  2195786 caaacaagtagcatcaatgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 2195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4882893 - 4882814
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||| |||||||||| |||||||| |||| |||||||||||||||||| ||||||||||  |||||||||    
T  4882893 caaagaagtagcattggtgagtgaaaataatctagtctaggattagagttaaggtgatctgttgaaagtgtggatcatga 4882814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 20350556 - 20350477
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||| ||||||||||||||||| | || |||||||||||| ||||||||||||||||  |||||||||    
T  20350556 caaagaagtagcatcgatgagtgaagataatctagtgtaggattagagttaaagtgatttgttgaaagtgtggatcatga 20350477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 20758569 - 20758487
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||||||||||||||||||||||||||| | || ||||| ||||||| |||| |||||||| | || |||||||    
T  20758569 aaacaaagaagtaacatcggtgagtgaagataatctagtttaggattatagttaagatgatctgttgaaaatgcgaatcatga 20758487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 3396734 - 3396813
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||| | |||||||||| |||||| | || |||||||||||||||||| |||||||||| ||||||||||    
T  3396734 caaagaagtagcatagatgagtgaagaaaatctagtttaggattagagttaaggtgatatgttgaaagtgcggatcatga 3396813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 33610738 - 33610817
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||  |||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||| ||||    
T  33610738 caaagaagtagcatcaatgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggattatga 33610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 30689934 - 30689855
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| ||||||||| |||||||| ||||  |||| |||||||||||| ||||||||||  |||||||||    
T  30689934 caaagaagtagcatcagtgagtgaaaataatctagtctagaattaaagttaaggtgatatgttgaaagtgtggatcatga 30689855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33930435 - 33930356
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||||||  ||| |||||||||||||||||| | || ||||| | |||||||||| ||||||| || ||||||||||    
T  33930435 caaataagtagaatcagtgagtgaagataatctagtatatgattaaaattaaggtgatatgttgaacgtgcggatcatga 33930356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 33706369 - 33706451
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| |||  |||| ||||||||||||  |||| |||||||||||||||||| |||||||| | || |||||||    
T  33706369 aaacaaagaagtagcatatgtgattgaagataatcttgtctaggattagagttaaggtgatctgttgaaattgcgaatcatga 33706451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 11014 - 11093
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| ||||||||||    
T  11014 caaagaagtagcatcggtgagtgaagataatcttgtctaggattagagttaaggtgatttgttgaaagtgcggatcatga 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 4565 - 4644
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||| ||||||||||    
T  4565 caaagaagtagcatcggtgagtgaagataatcttgtctaggattatagttaaggtgatttgttgaaagtgcggatcatga 4644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17940159 - 17940080
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  17940159 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 17940080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 11933090 - 11933169
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  11933090 caaagaagtagcatcagtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 11933169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 21800180 - 21800101
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| |||||||||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  21800180 caaagaagtaacatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 21800101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 33321061 - 33321140
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||| ||||||||||    
T  33321061 caaagaagtagcatcggtgagtgaagataatcttgtctaggattaaagttaaggtgatttgttgaaagtgcggatcatga 33321140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33814630 - 33814551
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  33814630 caaagaagtagcatcagtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 33814551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 1072868 - 1072950
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  1072868 aaacaaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 1072950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 35041730 - 35041648
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||||||| ||| ||||||||||||||| |||| |||||||||||||||||| |||||||||| || |||||||    
T  35041730 aaacaaagaagtaacattggtaagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcgaatcatga 35041648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4425124 - 4425045
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||| ||||||||||||||| ||||  ||||||||||||||||| |||||||||| ||||||||||    
T  4425124 caaagaagtagcatcggtcagtgaagataatctagtctacaattagagttaaggtgatatgttgaaagtgcggatcatga 4425045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 7222950 - 7222871
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||    
T  7222950 caaagaagtagcatcagtgagtgaagataatctagtctaggattagagttaaagtgatatgttgaaagtgcggatcatga 7222871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 18598593 - 18598672
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  18598593 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 18598672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 34856591 - 34856512
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  34856591 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 34856512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 34321729 - 34321655
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| |||||||||||||||||||| |  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  34321729 aagtagcatcggtgagtgaagataattttttctaggattagagttaaggtgatctgttgaaagtgcggatcatga 34321655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 2521804 - 2521725
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||  |||||||||| ||||||||||    
T  2521804 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgacatgttgaaagtgcggatcatga 2521725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 14887546 - 14887625
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| ||||||||||  |||||||||    
T  14887546 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgaggatcatga 14887625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 22373451 - 22373530
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| | ||||||||    
T  22373451 caaaaaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatctgttgaaagtgcagatcatga 22373530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 30044847 - 30044768
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| ||||||||| |||||||| ||||  ||||||||||||||||| |||||||||| ||||||||||    
T  30044847 caaagaagtagcatcagtgagtgaatataatctagtctagaattagagttaaggtgatatgttgaaagtgcggatcatga 30044768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 18312432 - 18312351
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| || |||||| ||||||||||||||||||| |||| ||||||| |||||||||| |||||||||| || |||||||    
T  18312432 aaacaaagaactaacattggtgagtgaagataatctagtctacgattaga-ttaaggtgatctgttgaaagtgcgaatcatga 18312351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 15276275 - 15276196
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||| |||||| |||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  15276275 caaagaagtagcatcagtgagtaaagatattctcgtctaggattagagttaaggtgatgtgttgaaagtgcggatcatga 15276196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 25540571 - 25540503
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagt 88  Q
    |||| ||||| |||| |||||||||||||||||  |||| ||||||| |||||||||| ||||||||||    
T  25540571 caaagaagtagcatcagtgagtgaagataatcttgtctaggattagaattaaggtgatctgttgaaagt 25540503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 14832125 - 14832059
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttg 83  Q
    ||||||| |||||  |||||||||||||||||||||  |||| ||||||||||||| |||| |||||    
T  14832125 aaacaaagaagtataatcggtgagtgaagataatcttgtctaggattagagttaagatgatctgttg 14832059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 24237147 - 24237083
Alignment:
Q  254 aaaacttcaatagtcttagcttaatatctaaagagtacaatattagatgtagttagttgattata 318  Q
    ||||| |||||||| ||||| | ||||||||||||| ||||||||||| |||||| ||| |||||    
T  24237147 aaaacctcaatagttttagcctgatatctaaagagttcaatattagatatagttacttggttata 24237083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 393
Target Start/End: Original strand, 8743888 - 8743933
Alignment:
Q  348 ataattacatttaacatacttaaccatagtaagttcattgcagcaa 393  Q
    |||||||||| ||||||| | ||||||||||||||||||| |||||    
T  8743888 ataattacatgtaacatagtaaaccatagtaagttcattgtagcaa 8743933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 7643407 - 7643486
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  7643407 caaaaaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatatgttgaaagtgcggatcatga 7643486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 37701212 - 37701291
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| | || |||||||||||||||||| |||||||||||||||||||||    
T  37701212 caaagaagtagcatcggtgagtgaagataatctagtttaggattagagttaaggtgatatgttgaaagtacggatcatga 37701291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 22115663 - 22115745
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||| || |||||||    
T  22115663 aaacaaagaagtaacatcggagagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcgaatcatga 22115745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 13628730 - 13628651
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| | ||||||||||| |||||||    
T  13628730 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctattgaaagtacgaatcatga 13628651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17699851 - 17699772
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||    
T  17699851 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaatgtgatctgttgaaagtgcggatcatga 17699772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 19831012 - 19831091
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||  |||||||||    
T  19831012 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgtggatcatga 19831091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 33502616 - 33502695
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| |||| ||||||| |||||||||| |||||||||| ||||||||||    
T  33502616 caaagaagtagcatcggtgagtgaagataatctagtctaggattagaattaaggtgatctgttgaaagtgcggatcatga 33502695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 35495216 - 35495295
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| | || |||||||||||||||||| |||||||||| ||||||||||    
T  35495216 caaagaagtagcatcggtgagtgaagataatctagtgtaggattagagttaaggtgatatgttgaaagtgcggatcatga 35495295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 38008936 - 38008857
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  38008936 caaagaagtagcatcggtgagtgaagataatcttgtctaggattagagttaaggtgatatgttgaaagtgcggatcatga 38008857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 53343085 - 53343006
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||  |||||||||    
T  53343085 caaagaagtagcatcggtgagtgaagataatctagtttaggattagagttaaggtgatttgttgaaagtgtggatcatga 53343006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 2776955 - 2776873
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| || |||||||||||||||||||||||||| |||  |||||||||||||||||| |||||||||| || |||||||    
T  2776955 aaacaaagaaataacatcggtgagtgaagataatctagtctgggattagagttaaggtgatctgttgaaagtgcgaatcatga 2776873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 7847694 - 7847620
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| |||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  7847694 aagtagcatcagtgagtgaagataatctagtctaggattagagttaaggtgatatgttgaaagtgcggatcatga 7847620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 8531493 - 8531414
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| |||||||||||||||||| | |||||||| ||||||||||    
T  8531493 caaaaaagtagcatcggtgagtgaagataatcttgtctatgattagagttaaggtgatctattgaaagtgcggatcatga 8531414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 14829126 - 14829205
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||||||||  ||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  14829126 caaagaagtaacatcactgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 14829205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 36514952 - 36515023
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagt 88  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||| |||||||||||| |||| |||||    
T  36514952 aaacaaagaagtaacatcggtgagtgaagataatctagtctaggattaaagttaaggtgatctgttaaaagt 36515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 41983848 - 41983927
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||| | || |||||||||||||||||| |||||||||  ||||||||||    
T  41983848 caaagaagtagcatcggtgagtgaagataatctagtttaggattagagttaaggtgatctgttgaaagagcggatcatga 41983927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 54331274 - 54331337
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  54331274 gtgagtgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 54331337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 39742609 - 39742677
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagt 88  Q
    |||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  39742609 caaagaagtagcatcagtgagtgaagataatctagtctatgattagagttaaggtgatatgttgaaagt 39742677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17740716 - 17740637
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||||||||| |  |||| |||||||||||||||| | |||||||||| ||||||||||    
T  17740716 caaagaagtagcatcggtgagtgaagataatattttctaggattagagttaaggtggtctgttgaaagtgcggatcatga 17740637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 40622826 - 40622747
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| |||||||||||||||||| |||| ||| | ||||||||||    
T  40622826 caaagaagtagcatcggtgagtgaagataatcttgtctaggattagagttaaggtgatctgttaaaaatgcggatcatga 40622747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 5271887 - 5271969
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| |||  ||||||||||||||| || |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  5271887 aaacaaagaagtagcattagtgagtgaagataatttagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 5271969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 28973732 - 28973658
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| |||||||||||||| ||||| || |||| |||||||||||||||||| |||||||||| | ||||||||    
T  28973732 aagtagcatcggtgagtgaatataatttagtctaggattagagttaaggtgatctgttgaaagtgcagatcatga 28973658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 47557038 - 47557120
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| ||||||||| ||||||||||||  |||| |||||||||||||||||| |||||||| | || |||||||    
T  47557038 aaacaaagaagtagcatcggtgattgaagataatcttgtctaggattagagttaaggtgatctgttgaaattgcgaatcatga 47557120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 55998327 - 55998389
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgtt 82  Q
    |||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  55998327 caaagaagtagcatcggtgagtgaagataatctagtctaggattagagttaaggtgatctgtt 55998389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 23479564 - 23479496
Alignment:
Q  31 catcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| | ||||||||    
T  23479564 catcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcagatcatga 23479496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 36857727 - 36857664
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||| ||||||||| ||||| ||||||||||||||||| |||||||||| || |||||||    
T  36857727 gtgagtgaggataatctactctaaaattagagttaaggtgatctgttgaaagtgcgcatcatga 36857664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 34056178 - 34056257
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| |||   |||||||| |||||||  |||| ||||| |||||||||||||||||||||||  |||||||||    
T  34056178 caaataagtagcattattgagtgaatataatcttgtctaggattatagttaaggtgatttgttgaaagtgtggatcatga 34056257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 10332 - 10414
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| |||| |||||||||||||||||  |||| ||||||||||||||||||||||||||||| ||||||||||    
T  10332 aaacaaagaagtatcatcagtgagtgaagataatcttgtctaggattagagttaaggtgatttgttgaaagtgcggatcatga 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 3020 - 3099
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  3020 caaagaagtagcatcggtgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 3099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 602 - 523
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  602 caaagaagtagcatcggtgagtgaagataatcttgtctaggattagagttaaggtgatatgttgaaagtgcggatcatga 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 48836 - 48915
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  48836 caaagaagtagcatcggtgagtgaatataatctagtctaggattagagttaaggtgatatgttgaaagtgcggatcatga 48915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 177114 - 177035
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||| ||||||||||    
T  177114 caaagaagtagcatcggtgagtgaatataatttagtctaagattagagttaaggtgatctgttgaaagtgcggatcatga 177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 120554 - 120481
Alignment:
Q  26 agtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||| | || |||||||||||||||||| |||||||||| | ||||||||    
T  120554 agtagcatcgatgagtgaagataatctagtataggattagagttaaggtgatctgttgaaagtgcagatcatga 120481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 48340978 - 48340899
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||| |||| ||||| ||||||||||    
T  48340978 caaagaagtaacatcagtgagtgaagataatctagtctaagattagagataaggtgatatgttcaaagtgcggatcatga 48340899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 50561712 - 50561633
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  | || ||||||||||||||||||||||||||||| ||||||||||    
T  50561712 caaagaagtagcatcggtgagtgaagataatcttgtttaggattagagttaaggtgatttgttgaaagtgcggatcatga 50561633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 44407026 - 44406944
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||||||| |||||||||||||||| || |||| ||||||||||||||||||| ||||||||| || |||||||    
T  44407026 aaacaaagaagtaacattggtgagtgaagataatatagtctatgattagagttaaggtgattagttgaaagtgcgaatcatga 44406944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 18814882 - 18814803
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  18814882 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 18814803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 34688250 - 34688171
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  34688250 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 34688171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 38844807 - 38844874
Alignment:
Q  32 atcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  38844807 atcggtgactgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 38844874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 41962521 - 41962595
Alignment:
Q  25 aagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| |||||||||||||||||| |||| ||||| ||| |||||||| |||||||||| ||||||||||    
T  41962521 aagtaacatcagtgagtgaagataatctagtctaggattaaagtaaaggtgatatgttgaaagtgcggatcatga 41962595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 52521205 - 52521279
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggat 94  Q
    |||| |||||||||| |||||||||||||||||  |||| |||||||||||||||||| |||||||||| |||||    
T  52521205 caaagaagtaacatcagtgagtgaagataatcttgtctaggattagagttaaggtgatctgttgaaagtgcggat 52521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 12245482 - 12245561
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||| |||| |||||||||||||||||| | || ||||||| |||||||||| ||||||| || ||||||||||    
T  12245482 caaataagtagcatcagtgagtgaagataatctagtatatgattagaattaaggtgatatgttgaacgtgcggatcatga 12245561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 31620352 - 31620273
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||  ||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  31620352 caaagaagtagcatcactgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 31620273  T

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Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 34692778 - 34692699
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| ||||||||| |||||||| |||| |||||||||||||||||| |||||||||| ||||| ||||    
T  34692778 caaagaagtagcatcagtgagtgaatataatctagtctaggattagagttaaggtgatctgttgaaagtgcggattatga 34692699  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 41829654 - 41829717
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  41829654 gtgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 41829717  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 52310500 - 52310418
Alignment:
Q  17 aaacaaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||||| ||||| ||||||||||| ||||||||||  |||| |||||||||||||||||| || ||||||| || |||||||    
T  52310500 aaacaaagaagtagcatcggtgagtaaagataatcttgtctaggattagagttaaggtgatctgctgaaagtgcgaatcatga 52310418  T

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Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 10694411 - 10694490
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| || |||||| |||||||||| |  |||| |||||||||||||||||| |||||||||| ||||||||||    
T  10694411 caaagaagtagcaccggtgaatgaagataatattgtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 10694490  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17672113 - 17672034
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| | || ||||||| |||||||||| |||||||||| | ||||||||    
T  17672113 caaagaagtagcatcagtgagtgaagataatctactataggattagaattaaggtgatctgttgaaagtgcagatcatga 17672034  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 45005433 - 45005354
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| | || ||||||| |||| || || |||||||||| ||||||||||    
T  45005433 caaagaagtagcatcagtgagtgaagataatctagtataggattagaattaaagtaatatgttgaaagtgcggatcatga 45005354  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 16031229 - 16031281
Alignment:
Q  31 catcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttg 83  Q
    |||| |||||||||||||||||| | || ||||||| |||||||||| |||||    
T  16031229 catcagtgagtgaagataatctagtataggattagaattaaggtgatatgttg 16031281  T

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Target: scaffold1634 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 633 - 712
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| |||| |||||||||||||||||| ||||  ||||||||||||||||| |||||||||| ||||||||||    
T  633 caaagaagtagcatctgtgagtgaagataatctagtctagcattagagttaaggtgatctgttgaaagtgcggatcatga 712  T

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Target: scaffold0047 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 25960 - 26039
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||||||||  ||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  25960 caaagaagtaacatcactgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 26039  T

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Target: scaffold0005 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 10583 - 10504
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||||||||  ||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||||||    
T  10583 caaagaagtaacatcactgagtgaagataatctagtctaggattaaagttaaggtgatatgttgaaagtgcggatcatga 10504  T

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Target: scaffold0121 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 14953 - 15017
Alignment:
Q  35 ggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    ||||| ||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  14953 ggtgactgaagataatctagtctaggattagagttaaggtgatctgttgaaagtgcggatcatga 15017  T

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Target: scaffold0045 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 12529 - 12608
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||| ||||| ||||||||||||||||||||||  |||| |||||||||||| ||||| |||||||||| ||| ||||||    
T  12529 caaagaagtagcatcggtgagtgaagataatcttgtctaggattagagttaatgtgatatgttgaaagtgcgggtcatga 12608  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 101349 - 101286
Alignment:
Q  36 gtgagtgaagataatctaatctaagattagagttaaggtgatttgttgaaagtacggatcatga 99  Q
    |||||||||||||||||| | || ||||||| ||||||||||  ||||||||| ||||||||||    
T  101349 gtgagtgaagataatctagtataggattagaattaaggtgatcggttgaaagtgcggatcatga 101286  T

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Target: scaffold0231 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 3800 - 3736
Alignment:
Q  254 aaaacttcaatagtcttagcttaatatctaaagagtacaatattagatgtagttagttgattata 318  Q
    ||||| |||||||| ||||| | ||||||||||||| ||||||||||| |||||| ||| |||||    
T  3800 aaaacctcaatagttttagcctgatatctaaagagttcaatattagatatagttacttggttata 3736  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 5153 - 5099
Alignment:
Q  20 caaataagtaacatcggtgagtgaagataatctaatctaagattagagttaaggt 74  Q
    |||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||    
T  5153 caaagaagtagcatcagtgagtgaagataatctagtctaggattaaagttaaggt 5099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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