View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15672_high_58 (Length: 220)
Name: NF15672_high_58
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15672_high_58 |
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Alignment Details
Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 14089573 - 14089379
Alignment:
| Q |
11 |
gagaagcaaaggctatagtagactgtgaaccattacttcacgagaagaaccaaaagaagcctctctcaaattgtaatagtatacgaatcatcatttatat |
110 |
Q |
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| T |
14089573 |
gagaaacaaaggctatagtagactgtgaaccattacttcacgagaagaaccaaaagaaccctctctcaaattgtaatagtatacgaatcatcatttatat |
14089474 |
T |
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| Q |
111 |
tatcaagaattgagggttgcaacttgcaacgtattgagatcttaattcatacataggatctataattgagggtagagtaaggaaatgcacattct |
205 |
Q |
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| T |
14089473 |
tatcaagaattgagggttgcaacttgcaacgcattgagatcttaattcatacataggatctataattgagggtagagtaaggaaatgcacattct |
14089379 |
T |
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