View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15672_high_6 (Length: 536)

Name: NF15672_high_6
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15672_high_6
NF15672_high_6
[»] chr6 (17 HSPs)
chr6 (353-489)||(4967693-4967826)
chr6 (177-235)||(9818985-9819043)
chr6 (283-413)||(9819179-9819306)
chr6 (489-520)||(26908354-26908385)
chr6 (489-519)||(1414740-1414770)
chr6 (489-519)||(2039401-2039431)
chr6 (489-519)||(2255467-2255497)
chr6 (489-519)||(2965676-2965706)
chr6 (489-519)||(4407972-4408002)
chr6 (489-519)||(6176843-6176873)
chr6 (489-519)||(7850603-7850633)
chr6 (489-519)||(19591451-19591481)
chr6 (489-519)||(25948732-25948762)
chr6 (489-519)||(27660478-27660508)
chr6 (489-519)||(28228706-28228736)
chr6 (489-519)||(34101092-34101122)
chr6 (491-519)||(18699103-18699131)
[»] chr5 (24 HSPs)
chr5 (485-519)||(22833499-22833533)
chr5 (489-520)||(6802226-6802257)
chr5 (489-520)||(13952561-13952592)
chr5 (489-520)||(26006616-26006647)
chr5 (489-520)||(27830058-27830089)
chr5 (489-520)||(29690568-29690599)
chr5 (489-520)||(34974153-34974184)
chr5 (489-519)||(2841829-2841859)
chr5 (489-519)||(7884930-7884960)
chr5 (489-519)||(8406069-8406099)
chr5 (489-519)||(10690944-10690974)
chr5 (489-519)||(12369568-12369598)
chr5 (489-519)||(13003900-13003930)
chr5 (489-519)||(13078556-13078586)
chr5 (489-519)||(13892669-13892699)
chr5 (489-519)||(14435753-14435783)
chr5 (489-519)||(18805314-18805344)
chr5 (489-519)||(20352784-20352814)
chr5 (489-519)||(21262708-21262738)
chr5 (489-519)||(26404985-26405015)
chr5 (489-519)||(27451400-27451430)
chr5 (489-519)||(38678283-38678313)
chr5 (489-519)||(39886617-39886647)
chr5 (491-520)||(14946507-14946536)
[»] chr7 (19 HSPs)
chr7 (484-520)||(35077775-35077811)
chr7 (489-520)||(3687724-3687755)
chr7 (489-520)||(24932103-24932134)
chr7 (489-520)||(25728342-25728373)
chr7 (489-520)||(43989145-43989176)
chr7 (489-519)||(4098177-4098207)
chr7 (489-519)||(12180034-12180064)
chr7 (489-519)||(15984332-15984362)
chr7 (489-519)||(16274573-16274603)
chr7 (489-519)||(17358155-17358185)
chr7 (489-519)||(18318567-18318597)
chr7 (485-519)||(28311252-28311286)
chr7 (489-519)||(30538241-30538271)
chr7 (489-519)||(38651936-38651966)
chr7 (489-519)||(41745240-41745270)
chr7 (489-519)||(46134777-46134807)
chr7 (489-519)||(46483726-46483756)
chr7 (491-519)||(14542714-14542742)
chr7 (491-519)||(41877239-41877267)
[»] scaffold0734 (1 HSPs)
scaffold0734 (489-520)||(3074-3105)
[»] scaffold0090 (1 HSPs)
scaffold0090 (489-520)||(15469-15500)
[»] chr8 (19 HSPs)
chr8 (489-520)||(9500909-9500940)
chr8 (489-520)||(17749964-17749995)
chr8 (489-520)||(21589942-21589973)
chr8 (489-520)||(28898890-28898921)
chr8 (489-520)||(31957404-31957435)
chr8 (489-519)||(222720-222750)
chr8 (489-519)||(691875-691905)
chr8 (489-519)||(736343-736373)
chr8 (489-519)||(860238-860268)
chr8 (489-519)||(6163026-6163056)
chr8 (489-519)||(10761032-10761062)
chr8 (489-519)||(16669406-16669436)
chr8 (489-519)||(18609374-18609404)
chr8 (489-519)||(21127479-21127509)
chr8 (489-519)||(22980913-22980943)
chr8 (489-519)||(23352151-23352181)
chr8 (489-519)||(23382824-23382854)
chr8 (489-519)||(34618073-34618103)
chr8 (491-519)||(116721-116749)
[»] chr3 (24 HSPs)
chr3 (489-520)||(7731420-7731451)
chr3 (489-520)||(7862549-7862580)
chr3 (489-520)||(21015343-21015374)
chr3 (489-520)||(40003978-40004009)
chr3 (489-520)||(55120720-55120751)
chr3 (489-519)||(3526690-3526720)
chr3 (489-519)||(5047318-5047348)
chr3 (489-519)||(5154848-5154878)
chr3 (489-519)||(6019502-6019532)
chr3 (489-519)||(11914945-11914975)
chr3 (489-519)||(13207595-13207625)
chr3 (489-519)||(21802316-21802346)
chr3 (489-519)||(24234156-24234186)
chr3 (489-519)||(30751328-30751358)
chr3 (489-519)||(32858256-32858286)
chr3 (489-519)||(33312439-33312469)
chr3 (489-519)||(38560167-38560197)
chr3 (489-519)||(39825595-39825625)
chr3 (489-519)||(39937168-39937198)
chr3 (489-519)||(40717460-40717490)
chr3 (489-519)||(49817703-49817733)
chr3 (489-519)||(52866064-52866094)
chr3 (489-519)||(53050034-53050064)
chr3 (489-518)||(25025074-25025103)
[»] chr2 (26 HSPs)
chr2 (489-520)||(1320706-1320737)
chr2 (489-520)||(5513586-5513617)
chr2 (489-520)||(27927036-27927067)
chr2 (489-520)||(34963504-34963535)
chr2 (489-520)||(39615734-39615765)
chr2 (489-519)||(2077194-2077224)
chr2 (489-519)||(2531931-2531961)
chr2 (489-519)||(7511498-7511528)
chr2 (489-519)||(7515782-7515812)
chr2 (489-519)||(8224539-8224569)
chr2 (489-519)||(9273639-9273669)
chr2 (489-519)||(12883186-12883216)
chr2 (489-519)||(14274329-14274359)
chr2 (489-519)||(18115451-18115481)
chr2 (489-519)||(20100910-20100940)
chr2 (489-519)||(20513773-20513803)
chr2 (489-519)||(20962148-20962178)
chr2 (489-519)||(25301413-25301443)
chr2 (489-519)||(25890651-25890681)
chr2 (489-519)||(33216539-33216569)
chr2 (489-519)||(36202224-36202254)
chr2 (489-519)||(40926830-40926860)
chr2 (489-519)||(44354006-44354036)
chr2 (491-520)||(1591931-1591960)
chr2 (490-519)||(5863290-5863319)
chr2 (491-519)||(28192450-28192478)
[»] chr1 (17 HSPs)
chr1 (489-520)||(16087299-16087330)
chr1 (489-520)||(16985293-16985324)
chr1 (489-520)||(24169258-24169289)
chr1 (489-520)||(29641743-29641774)
chr1 (489-520)||(44345105-44345136)
chr1 (489-519)||(1613695-1613725)
chr1 (489-519)||(6587630-6587660)
chr1 (489-519)||(6953984-6954014)
chr1 (489-519)||(11586333-11586363)
chr1 (489-519)||(12886904-12886934)
chr1 (489-519)||(15734578-15734608)
chr1 (489-519)||(22374713-22374743)
chr1 (489-519)||(39935035-39935065)
chr1 (489-519)||(40633239-40633269)
chr1 (489-519)||(44545737-44545767)
chr1 (489-519)||(48044836-48044866)
chr1 (489-518)||(1819188-1819217)
[»] scaffold1130 (1 HSPs)
scaffold1130 (489-519)||(1356-1386)
[»] scaffold0744 (1 HSPs)
scaffold0744 (489-519)||(1407-1437)
[»] scaffold0740 (1 HSPs)
scaffold0740 (489-519)||(2997-3027)
[»] scaffold0599 (1 HSPs)
scaffold0599 (489-519)||(6696-6726)
[»] scaffold0420 (1 HSPs)
scaffold0420 (489-519)||(4396-4426)
[»] scaffold0235 (1 HSPs)
scaffold0235 (489-519)||(24295-24325)
[»] scaffold0199 (1 HSPs)
scaffold0199 (489-519)||(11946-11976)
[»] scaffold0148 (1 HSPs)
scaffold0148 (489-519)||(24580-24610)
[»] scaffold0043 (1 HSPs)
scaffold0043 (489-519)||(47174-47204)
[»] scaffold0038 (1 HSPs)
scaffold0038 (489-519)||(29204-29234)
[»] scaffold0031 (1 HSPs)
scaffold0031 (489-519)||(92816-92846)
[»] scaffold0023 (1 HSPs)
scaffold0023 (489-519)||(125466-125496)
[»] scaffold0001 (1 HSPs)
scaffold0001 (489-519)||(403619-403649)
[»] chr4 (12 HSPs)
chr4 (489-519)||(6458074-6458104)
chr4 (489-519)||(11347368-11347398)
chr4 (489-519)||(13168933-13168963)
chr4 (489-519)||(17697258-17697288)
chr4 (489-519)||(19042185-19042215)
chr4 (489-519)||(19203692-19203722)
chr4 (489-519)||(19291497-19291527)
chr4 (489-519)||(19495562-19495592)
chr4 (489-519)||(20570003-20570033)
chr4 (489-519)||(22324592-22324622)
chr4 (489-519)||(47465281-47465311)
chr4 (491-519)||(28755238-28755266)


Alignment Details
Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 353 - 489
Target Start/End: Original strand, 4967693 - 4967826
Alignment:
Q  353 ttctaccacaaaacgatttgtgccctaggtagcagatatgttaacaaacatactattgactggggggtatacatctgtatacacattcgaattttagaaa 452  Q
    ||||||||||| | |||||| ||   |||||||||||||| ||||||||||||||||||||   ||||||||||||| ||||  |||| ||| |||||||    
T  4967693 ttctaccacaacaagatttgcgcagcaggtagcagatatgctaacaaacatactattgact---gggtatacatctgaatacttattccaatcttagaaa 4967789  T
Q  453 agaaaaccaataaacatctaatgcaatgcatgattat 489  Q
    |  || ||| ||| || ||||||||| | ||||||||    
T  4967790 accaatccactaaccacctaatgcaaagtatgattat 4967826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 9818985 - 9819043
Alignment:
Q  177 agctgttagaagccctccaacctgcacaaagaatgatgagtgaagaatcaaattgatgt 235  Q
    |||||||||||||||||||| |||||||||||||||| ||| || ||||||||| ||||    
T  9818985 agctgttagaagccctccaaactgcacaaagaatgatcagtcaaaaatcaaattcatgt 9819043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 413
Target Start/End: Original strand, 9819179 - 9819306
Alignment:
Q  283 gacttagacgaggttctgacagctctct--ttctatgttctaactaccgacagagaaggttaaatttttaacttctaccacaaaacgatttgtgccctag 380  Q
    |||||| |||||||||| |||||||| |  ||||  ||||||||||  ||| ||||||||||||||||| || |||| ||||||  |||||||||   ||    
T  9819179 gacttatacgaggttctcacagctctatccttctgagttctaactattgacggagaaggttaaattttttacatctaacacaaa--gatttgtgc---ag 9819273  T
Q  381 gtagcagatatgttaacaaacatactattgact 413  Q
     ||| ||||||| ||| ||||||||||||||||    
T  9819274 ctagtagatatgctaaaaaacatactattgact 9819306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 26908385 - 26908354
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  26908385 tggtttttgaatggcctattaagggtgttttt 26908354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 1414740 - 1414770
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  1414740 tggtttttgaatggcctattaagggtgtttt 1414770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 2039431 - 2039401
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  2039431 tggtttttgaatggcctattaagggtgtttt 2039401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 2255497 - 2255467
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  2255497 tggtttttgaatggcctattaagggtgtttt 2255467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 2965706 - 2965676
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  2965706 tggtttttgaatggcctattaagggtgtttt 2965676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 4408002 - 4407972
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  4408002 tggtttttgaatggcctattaagggtgtttt 4407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 6176843 - 6176873
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  6176843 tggtttttgaatggcctattaagggtgtttt 6176873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 7850633 - 7850603
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  7850633 tggtttttgaatggcctattaagggtgtttt 7850603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 19591451 - 19591481
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  19591451 tggtttttgaatggcctattaagggtgtttt 19591481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 25948762 - 25948732
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  25948762 tggtttttgaatggcctattaagggtgtttt 25948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 27660508 - 27660478
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  27660508 tggtttttgaatggcctattaagggtgtttt 27660478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 28228736 - 28228706
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  28228736 tggtttttgaatggcctattaagggtgtttt 28228706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 34101122 - 34101092
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  34101122 tggtttttgaatggcctattaagggtgtttt 34101092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 519
Target Start/End: Complemental strand, 18699131 - 18699103
Alignment:
Q  491 gtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||    
T  18699131 gtttttgaatggcctattaagggtgtttt 18699103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 519
Target Start/End: Complemental strand, 22833533 - 22833499
Alignment:
Q  485 attatggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||||||    
T  22833533 attatggtttttgaatggcctattaagggtgtttt 22833499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 6802226 - 6802257
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  6802226 tggtttttgaatggcctattaagggtgttttt 6802257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 13952592 - 13952561
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  13952592 tggtttttgaatggcctattaagggtgttttt 13952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 26006647 - 26006616
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  26006647 tggtttttgaatggcctattaagggtgttttt 26006616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 27830089 - 27830058
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  27830089 tggtttttgaatggcctattaagggtgttttt 27830058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 29690599 - 29690568
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  29690599 tggtttttgaatggcctattaagggtgttttt 29690568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 34974153 - 34974184
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  34974153 tggtttttgaatggcctattaagggtgttttt 34974184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 2841829 - 2841859
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  2841829 tggtttttgaatggcctattaagggtgtttt 2841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 7884930 - 7884960
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  7884930 tggtttttgaatggcctattaagggtgtttt 7884960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 8406069 - 8406099
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  8406069 tggtttttgaatggcctattaagggtgtttt 8406099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 10690944 - 10690974
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  10690944 tggtttttgaatggcctattaagggtgtttt 10690974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 12369598 - 12369568
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  12369598 tggtttttgaatggcctattaagggtgtttt 12369568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 13003930 - 13003900
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  13003930 tggtttttgaatggcctattaagggtgtttt 13003900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 13078586 - 13078556
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  13078586 tggtttttgaatggcctattaagggtgtttt 13078556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 13892699 - 13892669
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  13892699 tggtttttgaatggcctattaagggtgtttt 13892669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 14435753 - 14435783
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  14435753 tggtttttgaatggcctattaagggtgtttt 14435783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 18805314 - 18805344
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  18805314 tggtttttgaatggcctattaagggtgtttt 18805344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 20352784 - 20352814
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  20352784 tggtttttgaatggcctattaagggtgtttt 20352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 21262738 - 21262708
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  21262738 tggtttttgaatggcctattaagggtgtttt 21262708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 26405015 - 26404985
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  26405015 tggtttttgaatggcctattaagggtgtttt 26404985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 27451430 - 27451400
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  27451430 tggtttttgaatggcctattaagggtgtttt 27451400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 38678313 - 38678283
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  38678313 tggtttttgaatggcctattaagggtgtttt 38678283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 39886647 - 39886617
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  39886647 tggtttttgaatggcctattaagggtgtttt 39886617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 520
Target Start/End: Complemental strand, 14946536 - 14946507
Alignment:
Q  491 gtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||    
T  14946536 gtttttgaatggcctattaagggtgttttt 14946507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 520
Target Start/End: Original strand, 35077775 - 35077811
Alignment:
Q  484 gattatggtttttgaatggcctattaagggtgttttt 520  Q
    |||| ||||||||||||||||||||||||||||||||    
T  35077775 gattttggtttttgaatggcctattaagggtgttttt 35077811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 3687755 - 3687724
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  3687755 tggtttttgaatggcctattaagggtgttttt 3687724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 24932103 - 24932134
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  24932103 tggtttttgaatggcctattaagggtgttttt 24932134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 25728342 - 25728373
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  25728342 tggtttttgaatggcctattaagggtgttttt 25728373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 43989176 - 43989145
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  43989176 tggtttttgaatggcctattaagggtgttttt 43989145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 4098207 - 4098177
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  4098207 tggtttttgaatggcctattaagggtgtttt 4098177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 12180064 - 12180034
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  12180064 tggtttttgaatggcctattaagggtgtttt 12180034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 15984332 - 15984362
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  15984332 tggtttttgaatggcctattaagggtgtttt 15984362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 16274603 - 16274573
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  16274603 tggtttttgaatggcctattaagggtgtttt 16274573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 17358155 - 17358185
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  17358155 tggtttttgaatggcctattaagggtgtttt 17358185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 18318597 - 18318567
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  18318597 tggtttttgaatggcctattaagggtgtttt 18318567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 519
Target Start/End: Original strand, 28311252 - 28311286
Alignment:
Q  485 attatggtttttgaatggcctattaagggtgtttt 519  Q
    ||||| |||||||||||||||||||||||||||||    
T  28311252 attattgtttttgaatggcctattaagggtgtttt 28311286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 30538271 - 30538241
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  30538271 tggtttttgaatggcctattaagggtgtttt 30538241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 38651936 - 38651966
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  38651936 tggtttttgaatggcctattaagggtgtttt 38651966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 41745240 - 41745270
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  41745240 tggtttttgaatggcctattaagggtgtttt 41745270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 46134777 - 46134807
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  46134777 tggtttttgaatggcctattaagggtgtttt 46134807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 46483756 - 46483726
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  46483756 tggtttttgaatggcctattaagggtgtttt 46483726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 519
Target Start/End: Complemental strand, 14542742 - 14542714
Alignment:
Q  491 gtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||    
T  14542742 gtttttgaatggcctattaagggtgtttt 14542714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 519
Target Start/End: Original strand, 41877239 - 41877267
Alignment:
Q  491 gtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||    
T  41877239 gtttttgaatggcctattaagggtgtttt 41877267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 3105 - 3074
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  3105 tggtttttgaatggcctattaagggtgttttt 3074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 15500 - 15469
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  15500 tggtttttgaatggcctattaagggtgttttt 15469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 9500909 - 9500940
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  9500909 tggtttttgaatggcctattaagggtgttttt 9500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 17749995 - 17749964
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  17749995 tggtttttgaatggcctattaagggtgttttt 17749964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 21589973 - 21589942
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  21589973 tggtttttgaatggcctattaagggtgttttt 21589942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 28898890 - 28898921
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  28898890 tggtttttgaatggcctattaagggtgttttt 28898921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 31957435 - 31957404
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  31957435 tggtttttgaatggcctattaagggtgttttt 31957404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 222750 - 222720
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  222750 tggtttttgaatggcctattaagggtgtttt 222720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 691905 - 691875
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  691905 tggtttttgaatggcctattaagggtgtttt 691875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 736373 - 736343
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  736373 tggtttttgaatggcctattaagggtgtttt 736343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 860268 - 860238
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  860268 tggtttttgaatggcctattaagggtgtttt 860238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 6163056 - 6163026
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  6163056 tggtttttgaatggcctattaagggtgtttt 6163026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 10761062 - 10761032
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  10761062 tggtttttgaatggcctattaagggtgtttt 10761032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 16669406 - 16669436
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  16669406 tggtttttgaatggcctattaagggtgtttt 16669436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 18609404 - 18609374
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  18609404 tggtttttgaatggcctattaagggtgtttt 18609374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 21127479 - 21127509
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  21127479 tggtttttgaatggcctattaagggtgtttt 21127509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 22980943 - 22980913
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  22980943 tggtttttgaatggcctattaagggtgtttt 22980913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 23352151 - 23352181
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  23352151 tggtttttgaatggcctattaagggtgtttt 23352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 23382824 - 23382854
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  23382824 tggtttttgaatggcctattaagggtgtttt 23382854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 34618103 - 34618073
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  34618103 tggtttttgaatggcctattaagggtgtttt 34618073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 519
Target Start/End: Complemental strand, 116749 - 116721
Alignment:
Q  491 gtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||    
T  116749 gtttttgaatggcctattaagggtgtttt 116721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 7731420 - 7731451
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  7731420 tggtttttgaatggcctattaagggtgttttt 7731451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 7862549 - 7862580
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  7862549 tggtttttgaatggcctattaagggtgttttt 7862580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 21015374 - 21015343
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  21015374 tggtttttgaatggcctattaagggtgttttt 21015343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 40004009 - 40003978
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  40004009 tggtttttgaatggcctattaagggtgttttt 40003978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 55120751 - 55120720
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  55120751 tggtttttgaatggcctattaagggtgttttt 55120720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 3526690 - 3526720
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  3526690 tggtttttgaatggcctattaagggtgtttt 3526720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 5047318 - 5047348
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  5047318 tggtttttgaatggcctattaagggtgtttt 5047348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 5154848 - 5154878
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  5154848 tggtttttgaatggcctattaagggtgtttt 5154878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 6019532 - 6019502
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  6019532 tggtttttgaatggcctattaagggtgtttt 6019502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 11914975 - 11914945
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  11914975 tggtttttgaatggcctattaagggtgtttt 11914945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 13207625 - 13207595
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  13207625 tggtttttgaatggcctattaagggtgtttt 13207595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 21802346 - 21802316
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  21802346 tggtttttgaatggcctattaagggtgtttt 21802316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 24234156 - 24234186
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  24234156 tggtttttgaatggcctattaagggtgtttt 24234186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 30751328 - 30751358
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  30751328 tggtttttgaatggcctattaagggtgtttt 30751358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 32858286 - 32858256
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  32858286 tggtttttgaatggcctattaagggtgtttt 32858256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 33312469 - 33312439
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  33312469 tggtttttgaatggcctattaagggtgtttt 33312439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 38560167 - 38560197
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  38560167 tggtttttgaatggcctattaagggtgtttt 38560197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 39825595 - 39825625
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  39825595 tggtttttgaatggcctattaagggtgtttt 39825625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 39937168 - 39937198
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  39937168 tggtttttgaatggcctattaagggtgtttt 39937198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 40717490 - 40717460
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  40717490 tggtttttgaatggcctattaagggtgtttt 40717460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 49817733 - 49817703
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  49817733 tggtttttgaatggcctattaagggtgtttt 49817703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 52866094 - 52866064
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  52866094 tggtttttgaatggcctattaagggtgtttt 52866064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 53050064 - 53050034
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  53050064 tggtttttgaatggcctattaagggtgtttt 53050034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 518
Target Start/End: Original strand, 25025074 - 25025103
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttt 518  Q
    ||||||||||||||||||||||||||||||    
T  25025074 tggtttttgaatggcctattaagggtgttt 25025103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 1320737 - 1320706
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  1320737 tggtttttgaatggcctattaagggtgttttt 1320706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 5513617 - 5513586
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  5513617 tggtttttgaatggcctattaagggtgttttt 5513586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 27927067 - 27927036
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  27927067 tggtttttgaatggcctattaagggtgttttt 27927036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 34963504 - 34963535
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  34963504 tggtttttgaatggcctattaagggtgttttt 34963535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 39615734 - 39615765
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  39615734 tggtttttgaatggcctattaagggtgttttt 39615765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 2077194 - 2077224
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  2077194 tggtttttgaatggcctattaagggtgtttt 2077224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 2531961 - 2531931
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  2531961 tggtttttgaatggcctattaagggtgtttt 2531931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 7511498 - 7511528
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  7511498 tggtttttgaatggcctattaagggtgtttt 7511528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 7515782 - 7515812
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  7515782 tggtttttgaatggcctattaagggtgtttt 7515812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 8224539 - 8224569
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  8224539 tggtttttgaatggcctattaagggtgtttt 8224569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 9273669 - 9273639
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  9273669 tggtttttgaatggcctattaagggtgtttt 9273639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 12883216 - 12883186
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  12883216 tggtttttgaatggcctattaagggtgtttt 12883186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 14274359 - 14274329
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  14274359 tggtttttgaatggcctattaagggtgtttt 14274329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 18115481 - 18115451
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  18115481 tggtttttgaatggcctattaagggtgtttt 18115451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 20100910 - 20100940
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  20100910 tggtttttgaatggcctattaagggtgtttt 20100940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 20513803 - 20513773
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  20513803 tggtttttgaatggcctattaagggtgtttt 20513773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 20962178 - 20962148
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  20962178 tggtttttgaatggcctattaagggtgtttt 20962148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 25301443 - 25301413
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  25301443 tggtttttgaatggcctattaagggtgtttt 25301413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 25890681 - 25890651
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  25890681 tggtttttgaatggcctattaagggtgtttt 25890651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 33216539 - 33216569
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  33216539 tggtttttgaatggcctattaagggtgtttt 33216569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 36202254 - 36202224
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  36202254 tggtttttgaatggcctattaagggtgtttt 36202224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 40926830 - 40926860
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  40926830 tggtttttgaatggcctattaagggtgtttt 40926860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 44354036 - 44354006
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  44354036 tggtttttgaatggcctattaagggtgtttt 44354006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 520
Target Start/End: Complemental strand, 1591960 - 1591931
Alignment:
Q  491 gtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||    
T  1591960 gtttttgaatggcctattaagggtgttttt 1591931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 519
Target Start/End: Complemental strand, 5863319 - 5863290
Alignment:
Q  490 ggtttttgaatggcctattaagggtgtttt 519  Q
    ||||||||||||||||||||||||||||||    
T  5863319 ggtttttgaatggcctattaagggtgtttt 5863290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 519
Target Start/End: Original strand, 28192450 - 28192478
Alignment:
Q  491 gtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||    
T  28192450 gtttttgaatggcctattaagggtgtttt 28192478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 16087299 - 16087330
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  16087299 tggtttttgaatggcctattaagggtgttttt 16087330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 16985324 - 16985293
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  16985324 tggtttttgaatggcctattaagggtgttttt 16985293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 24169258 - 24169289
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  24169258 tggtttttgaatggcctattaagggtgttttt 24169289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 29641743 - 29641774
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  29641743 tggtttttgaatggcctattaagggtgttttt 29641774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 44345136 - 44345105
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttttt 520  Q
    ||||||||||||||||||||||||||||||||    
T  44345136 tggtttttgaatggcctattaagggtgttttt 44345105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 1613725 - 1613695
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  1613725 tggtttttgaatggcctattaagggtgtttt 1613695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 6587630 - 6587660
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  6587630 tggtttttgaatggcctattaagggtgtttt 6587660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 6954014 - 6953984
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  6954014 tggtttttgaatggcctattaagggtgtttt 6953984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 11586363 - 11586333
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  11586363 tggtttttgaatggcctattaagggtgtttt 11586333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 12886904 - 12886934
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  12886904 tggtttttgaatggcctattaagggtgtttt 12886934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 15734608 - 15734578
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  15734608 tggtttttgaatggcctattaagggtgtttt 15734578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 22374713 - 22374743
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  22374713 tggtttttgaatggcctattaagggtgtttt 22374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 39935065 - 39935035
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  39935065 tggtttttgaatggcctattaagggtgtttt 39935035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 40633239 - 40633269
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  40633239 tggtttttgaatggcctattaagggtgtttt 40633269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 44545767 - 44545737
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  44545767 tggtttttgaatggcctattaagggtgtttt 44545737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 48044836 - 48044866
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  48044836 tggtttttgaatggcctattaagggtgtttt 48044866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 518
Target Start/End: Complemental strand, 1819217 - 1819188
Alignment:
Q  489 tggtttttgaatggcctattaagggtgttt 518  Q
    ||||||||||||||||||||||||||||||    
T  1819217 tggtttttgaatggcctattaagggtgttt 1819188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 1386 - 1356
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  1386 tggtttttgaatggcctattaagggtgtttt 1356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 1437 - 1407
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  1437 tggtttttgaatggcctattaagggtgtttt 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 3027 - 2997
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  3027 tggtttttgaatggcctattaagggtgtttt 2997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 6726 - 6696
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  6726 tggtttttgaatggcctattaagggtgtttt 6696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 4396 - 4426
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  4396 tggtttttgaatggcctattaagggtgtttt 4426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 24325 - 24295
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  24325 tggtttttgaatggcctattaagggtgtttt 24295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 11976 - 11946
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  11976 tggtttttgaatggcctattaagggtgtttt 11946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 24580 - 24610
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  24580 tggtttttgaatggcctattaagggtgtttt 24610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 47204 - 47174
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  47204 tggtttttgaatggcctattaagggtgtttt 47174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 29234 - 29204
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  29234 tggtttttgaatggcctattaagggtgtttt 29204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 92816 - 92846
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  92816 tggtttttgaatggcctattaagggtgtttt 92846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 125466 - 125496
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  125466 tggtttttgaatggcctattaagggtgtttt 125496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 403619 - 403649
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  403619 tggtttttgaatggcctattaagggtgtttt 403649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000005; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 6458074 - 6458104
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  6458074 tggtttttgaatggcctattaagggtgtttt 6458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 11347368 - 11347398
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  11347368 tggtttttgaatggcctattaagggtgtttt 11347398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 13168933 - 13168963
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  13168933 tggtttttgaatggcctattaagggtgtttt 13168963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 17697288 - 17697258
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  17697288 tggtttttgaatggcctattaagggtgtttt 17697258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 19042185 - 19042215
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  19042185 tggtttttgaatggcctattaagggtgtttt 19042215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 19203722 - 19203692
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  19203722 tggtttttgaatggcctattaagggtgtttt 19203692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 19291497 - 19291527
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  19291497 tggtttttgaatggcctattaagggtgtttt 19291527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 19495562 - 19495592
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  19495562 tggtttttgaatggcctattaagggtgtttt 19495592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 20570033 - 20570003
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  20570033 tggtttttgaatggcctattaagggtgtttt 20570003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 22324592 - 22324622
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  22324592 tggtttttgaatggcctattaagggtgtttt 22324622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Complemental strand, 47465311 - 47465281
Alignment:
Q  489 tggtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||||    
T  47465311 tggtttttgaatggcctattaagggtgtttt 47465281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 491 - 519
Target Start/End: Original strand, 28755238 - 28755266
Alignment:
Q  491 gtttttgaatggcctattaagggtgtttt 519  Q
    |||||||||||||||||||||||||||||    
T  28755238 gtttttgaatggcctattaagggtgtttt 28755266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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