View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15672_low_10 (Length: 491)

Name: NF15672_low_10
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15672_low_10
NF15672_low_10
[»] chr1 (37 HSPs)
chr1 (268-491)||(8116187-8116410)
chr1 (81-201)||(8116002-8116122)
chr1 (13-86)||(3572560-3572633)
chr1 (13-85)||(6911497-6911569)
chr1 (13-82)||(2430500-2430569)
chr1 (13-82)||(49822916-49822985)
chr1 (13-84)||(2632856-2632927)
chr1 (16-87)||(5806285-5806356)
chr1 (13-84)||(46666712-46666783)
chr1 (13-83)||(12190175-12190245)
chr1 (13-82)||(1597341-1597410)
chr1 (13-82)||(6978774-6978843)
chr1 (13-82)||(9115841-9115910)
chr1 (13-78)||(36361786-36361851)
chr1 (13-81)||(14788727-14788795)
chr1 (13-81)||(39930461-39930529)
chr1 (13-80)||(25789767-25789834)
chr1 (13-84)||(47037461-47037532)
chr1 (13-82)||(8332018-8332087)
chr1 (13-82)||(39329612-39329681)
chr1 (13-82)||(52630777-52630846)
chr1 (13-81)||(20260086-20260154)
chr1 (13-84)||(9831867-9831938)
chr1 (13-83)||(38964677-38964747)
chr1 (13-86)||(5518499-5518572)
chr1 (19-83)||(35187466-35187530)
chr1 (13-84)||(4683371-4683442)
chr1 (18-85)||(32202327-32202394)
chr1 (13-79)||(32824926-32824992)
chr1 (13-78)||(51445083-51445148)
chr1 (13-84)||(48916019-48916090)
chr1 (26-81)||(1007764-1007819)
chr1 (15-84)||(50190762-50190831)
chr1 (13-72)||(37436630-37436689)
chr1 (13-75)||(30241013-30241075)
chr1 (31-84)||(29091688-29091741)
chr1 (26-82)||(52699465-52699521)
[»] chr3 (22 HSPs)
chr3 (13-88)||(24574578-24574653)
chr3 (13-81)||(28124436-28124504)
chr3 (13-84)||(26849025-26849096)
chr3 (13-82)||(40908268-40908337)
chr3 (13-86)||(6231496-6231569)
chr3 (16-85)||(8476304-8476373)
chr3 (13-82)||(11239119-11239188)
chr3 (13-82)||(44952311-44952380)
chr3 (24-81)||(9320448-9320505)
chr3 (13-82)||(20297796-20297865)
chr3 (13-85)||(20414461-20414533)
chr3 (13-77)||(33217917-33217981)
chr3 (13-81)||(47114857-47114925)
chr3 (13-82)||(43132156-43132225)
chr3 (13-79)||(1099201-1099267)
chr3 (13-82)||(31435922-31435991)
chr3 (13-78)||(48339760-48339825)
chr3 (19-82)||(43715307-43715370)
chr3 (35-84)||(29512704-29512753)
chr3 (15-54)||(9320407-9320446)
chr3 (13-62)||(31611004-31611053)
chr3 (30-83)||(45826796-45826849)
[»] chr5 (19 HSPs)
chr5 (13-85)||(4765556-4765628)
chr5 (13-84)||(12970527-12970598)
chr5 (13-82)||(19065504-19065573)
chr5 (13-85)||(18412212-18412284)
chr5 (13-83)||(27481360-27481430)
chr5 (13-82)||(22935911-22935980)
chr5 (13-82)||(28602558-28602627)
chr5 (13-84)||(555703-555774)
chr5 (13-84)||(14206818-14206889)
chr5 (13-85)||(29543011-29543083)
chr5 (13-81)||(36703877-36703945)
chr5 (13-78)||(11855658-11855723)
chr5 (13-77)||(6091718-6091782)
chr5 (14-75)||(8406898-8406959)
chr5 (19-79)||(32535946-32536006)
chr5 (30-82)||(42012178-42012230)
chr5 (26-79)||(20962606-20962659)
chr5 (13-60)||(8646412-8646459)
chr5 (30-79)||(26637045-26637094)
[»] chr4 (34 HSPs)
chr4 (13-85)||(35999693-35999765)
chr4 (13-81)||(48518891-48518959)
chr4 (13-82)||(27555417-27555486)
chr4 (13-82)||(39730292-39730361)
chr4 (13-82)||(45747795-45747864)
chr4 (24-84)||(25916032-25916092)
chr4 (13-85)||(40435907-40435979)
chr4 (13-84)||(48879332-48879403)
chr4 (13-87)||(27762893-27762967)
chr4 (13-81)||(13229989-13230057)
chr4 (13-84)||(6279918-6279989)
chr4 (13-84)||(23686794-23686865)
chr4 (13-82)||(41859046-41859115)
chr4 (13-82)||(45596275-45596344)
chr4 (13-81)||(34049597-34049665)
chr4 (13-84)||(39835304-39835375)
chr4 (19-82)||(55967999-55968062)
chr4 (13-82)||(18405233-18405302)
chr4 (13-82)||(25932448-25932517)
chr4 (13-82)||(42773955-42774024)
chr4 (13-82)||(43723271-43723340)
chr4 (13-77)||(27942750-27942814)
chr4 (13-85)||(41744216-41744288)
chr4 (14-81)||(32953531-32953598)
chr4 (19-82)||(39498838-39498901)
chr4 (19-82)||(39502177-39502240)
chr4 (13-80)||(47670369-47670436)
chr4 (13-79)||(18931760-18931826)
chr4 (26-88)||(30415922-30415984)
chr4 (13-82)||(936133-936202)
chr4 (24-77)||(34237424-34237477)
chr4 (13-86)||(50672903-50672973)
chr4 (13-76)||(10400810-10400873)
chr4 (13-69)||(8322252-8322308)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-88)||(201928-202003)
[»] chr6 (11 HSPs)
chr6 (13-84)||(7053567-7053638)
chr6 (13-82)||(14171016-14171085)
chr6 (13-84)||(2657703-2657774)
chr6 (13-84)||(8029336-8029407)
chr6 (13-81)||(1317021-1317089)
chr6 (13-78)||(18897924-18897989)
chr6 (14-86)||(7344078-7344150)
chr6 (13-74)||(16968928-16968989)
chr6 (30-87)||(3869525-3869582)
chr6 (13-82)||(6705764-6705833)
chr6 (48-81)||(10246222-10246255)
[»] chr2 (34 HSPs)
chr2 (13-84)||(346342-346413)
chr2 (13-84)||(39995128-39995199)
chr2 (13-84)||(6171794-6171865)
chr2 (13-84)||(11071608-11071679)
chr2 (13-88)||(37533955-37534030)
chr2 (13-87)||(42674655-42674729)
chr2 (13-82)||(21737399-21737468)
chr2 (13-82)||(41729129-41729198)
chr2 (13-81)||(9733846-9733914)
chr2 (13-85)||(14777494-14777566)
chr2 (13-83)||(5770108-5770178)
chr2 (13-82)||(34356699-34356768)
chr2 (13-82)||(40950858-40950927)
chr2 (13-84)||(2050869-2050940)
chr2 (13-84)||(2521678-2521749)
chr2 (26-84)||(13760961-13761019)
chr2 (13-79)||(37192525-37192591)
chr2 (13-82)||(4559562-4559631)
chr2 (13-82)||(20426482-20426551)
chr2 (13-77)||(28311701-28311765)
chr2 (13-80)||(41750532-41750599)
chr2 (13-84)||(45409253-45409324)
chr2 (13-82)||(17965986-17966055)
chr2 (13-77)||(638596-638660)
chr2 (13-77)||(37233432-37233496)
chr2 (13-84)||(27357960-27358031)
chr2 (14-76)||(26310273-26310335)
chr2 (13-85)||(6571690-6571762)
chr2 (35-85)||(40570045-40570095)
chr2 (13-77)||(14832813-14832877)
chr2 (32-82)||(7007595-7007645)
chr2 (13-66)||(14253525-14253578)
chr2 (13-78)||(18713660-18713725)
chr2 (13-81)||(1988314-1988382)
[»] chr7 (35 HSPs)
chr7 (17-83)||(25098076-25098142)
chr7 (13-82)||(9946989-9947058)
chr7 (13-82)||(33378845-33378914)
chr7 (13-86)||(39554186-39554259)
chr7 (13-82)||(48314125-48314194)
chr7 (13-81)||(40212892-40212960)
chr7 (13-84)||(8419586-8419657)
chr7 (13-80)||(45265049-45265116)
chr7 (13-83)||(27213853-27213923)
chr7 (13-82)||(11329996-11330065)
chr7 (13-82)||(27248296-27248365)
chr7 (13-82)||(45045629-45045698)
chr7 (24-77)||(45448956-45449009)
chr7 (13-82)||(48160590-48160659)
chr7 (13-78)||(48341365-48341430)
chr7 (13-81)||(38544197-38544265)
chr7 (19-82)||(9814217-9814280)
chr7 (13-84)||(25924634-25924705)
chr7 (13-84)||(27419221-27419292)
chr7 (13-80)||(43949248-43949315)
chr7 (13-82)||(35488188-35488257)
chr7 (13-77)||(38396370-38396434)
chr7 (13-81)||(44566048-44566116)
chr7 (13-80)||(41632365-41632432)
chr7 (14-80)||(45723211-45723277)
chr7 (13-82)||(16825353-16825422)
chr7 (30-91)||(18824166-18824227)
chr7 (13-82)||(28904185-28904254)
chr7 (13-80)||(34930466-34930534)
chr7 (24-79)||(44820268-44820323)
chr7 (15-86)||(31921743-31921813)
chr7 (35-81)||(45440933-45440979)
chr7 (13-82)||(25045617-25045685)
chr7 (13-79)||(6656226-6656292)
chr7 (30-82)||(41684021-41684073)
[»] chr8 (24 HSPs)
chr8 (13-81)||(18298115-18298183)
chr8 (13-81)||(18726619-18726687)
chr8 (13-85)||(26062147-26062219)
chr8 (13-84)||(32660930-32661001)
chr8 (13-82)||(1554353-1554422)
chr8 (13-82)||(12710648-12710717)
chr8 (13-82)||(25837914-25837983)
chr8 (13-82)||(35818423-35818492)
chr8 (13-82)||(37392545-37392614)
chr8 (13-82)||(38132736-38132805)
chr8 (13-82)||(38364084-38364153)
chr8 (13-84)||(26601935-26602006)
chr8 (13-75)||(3050012-3050074)
chr8 (13-82)||(16313506-16313575)
chr8 (13-81)||(10896217-10896285)
chr8 (15-82)||(41228713-41228780)
chr8 (13-80)||(42755870-42755937)
chr8 (13-86)||(7317376-7317449)
chr8 (19-77)||(7931248-7931306)
chr8 (19-81)||(40197076-40197138)
chr8 (28-79)||(5020492-5020543)
chr8 (31-80)||(33444627-33444676)
chr8 (33-82)||(35394413-35394462)
chr8 (48-84)||(8635672-8635708)
[»] scaffold0189 (1 HSPs)
scaffold0189 (13-76)||(28957-29020)


Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 268 - 491
Target Start/End: Original strand, 8116187 - 8116410
Alignment:
Q  268 ctagaaactgaaatcagctatcctaagcagcctttctcttattttaaagactttcattgtcaccgtcaaatgaattcaacagtaatatgtttcacccctt 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8116187 ctagaaactgaaatcagctatcctaagcagcctttctcttattttaaagactttcattgtcaccgtcaaatgaattcaacagtaatatgtttcacccctt 8116286  T
Q  368 attttctgtttcatcctatcattctgtttcttgtagctacaaaaacagaattaaaggctctttgaaactaatcctgcttgggaattaactaatttacctc 467  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8116287 attttctgtttcatcctatcattctatttcttgtagctacaaaaacagaattaaaggctctttgaaactaatcctgcttgggaattaactaatttacctc 8116386  T
Q  468 ctgaaaagaatgttatagcatgta 491  Q
    ||||||||||||||||||||||||    
T  8116387 ctgaaaagaatgttatagcatgta 8116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 81 - 201
Target Start/End: Original strand, 8116002 - 8116122
Alignment:
Q  81 cttagtttggagctcgtggtccgctccacacatctccgtccggtttatcgaacctcctctttgcaaactcaactaagttccatagattaaagcaaattga 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8116002 cttagtttggagctcgtggtccgctccacacatctccgtccggtttatcgaacctcctctttgcaaactcaactaagttccatagattaaagcaaattga 8116101  T
Q  181 tttaaagagaaacggattggt 201  Q
    |||||||||||||||||||||    
T  8116102 tttaaagagaaacggattggt 8116122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 3572633 - 3572560
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagt 86  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  3572633 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccttagt 3572560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 6911497 - 6911569
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6911497 cataggcatatacattcttatcattttattcccgagaatcaacaattataacttgaaacaaacacacccttag 6911569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 2430500 - 2430569
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  2430500 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 2430569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 49822985 - 49822916
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49822985 cataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccct 49822916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2632856 - 2632927
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  2632856 cataggcatatacattcctattattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 2632927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 5806356 - 5806285
Alignment:
Q  16 aggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagtt 87  Q
    ||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  5806356 aggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccttagtt 5806285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 46666712 - 46666783
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  46666712 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 46666783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 12190245 - 12190175
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctt 83  Q
    |||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  12190245 cataggcatgtacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaacacaccctt 12190175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 1597410 - 1597341
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  1597410 cataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccct 1597341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 6978774 - 6978843
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  6978774 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 6978843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 9115841 - 9115910
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  9115841 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 9115910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 36361786 - 36361851
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaca 78  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  36361786 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacaca 36361851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 14788727 - 14788795
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    ||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  14788727 catagacatatacattcctattattttattcccgggaatcaaaaattataacttgaaacaaacacaccc 14788795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 39930461 - 39930529
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  39930461 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 39930529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 25789767 - 25789834
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  25789767 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacc 25789834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 47037461 - 47037532
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| | ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  47037461 cataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 47037532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 8332018 - 8332087
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| |||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  8332018 cataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaacacaccct 8332087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 39329612 - 39329681
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  39329612 catagacatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 39329681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 52630777 - 52630846
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  52630777 catagacatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaacacaccct 52630846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 20260154 - 20260086
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  20260154 cataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaacacaccc 20260086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 9831938 - 9831867
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||    
T  9831938 cataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaacacacactta 9831867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 38964747 - 38964677
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctt 83  Q
    |||| ||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  38964747 cataagcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacaccccctt 38964677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 5518572 - 5518499
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagt 86  Q
    |||||||||| | ||| ||||||||||||||| | ||||||| || ||||||||||||||||||||||||||||    
T  5518572 cataggcatatatatttctatcattttattcctgggaatcaacaaatataacttgaaacaaacacacccttagt 5518499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 35187466 - 35187530
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctt 83  Q
    |||| ||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  35187466 catatacatttctatcattttattcccgggaatcaacaattataacttgaaaaaaacacaccctt 35187530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 4683442 - 4683371
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||||||||||||||| | | ||||||| |||||||| |||||||||| |||||||||    
T  4683442 cataggcatatacattcctatcattttatttctgggaatcaacaattataaattgaaacaaagacaccctta 4683371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 32202394 - 32202327
Alignment:
Q  18 gcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    ||||| ||||| |||||||||||||  || ||||||| ||||||||||||||||||||||||||||||    
T  32202394 gcatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaacacacccttag 32202327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 32824926 - 32824992
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    |||||||||| |||||||||| |||||||| |||  |||||| ||||||||||||||||||||||||    
T  32824926 cataggcatatacattcctattattttatttccggaaatcaacaattataacttgaaacaaacacac 32824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 51445148 - 51445083
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaca 78  Q
    |||||| ||| |||||  |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  51445148 cataggtatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaacaca 51445083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 48916090 - 48916019
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||| |||||||||||||| |  ||||||| || |||||||||||| |||||||||||||    
T  48916090 cataggcatatacatttctatcattttattctctggaatcaacaaatataacttgaaataaacacaccctta 48916019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 1007764 - 1007819
Alignment:
Q  26 attcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||| ||||||||||||| || ||||||| || |||||||||||||||||||||||    
T  1007764 attcatatcattttattctcgggaatcaacaaatataacttgaaacaaacacaccc 1007819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 50190831 - 50190762
Alignment:
Q  15 taggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||| ||||||||| ||||||||| |||  ||| || ||||||| |||||||||||||||| ||||    
T  50190831 taggcatatacattcctagcattttatttccggaaattaacaattatatcttgaaacaaacacactctta 50190762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 37436689 - 37436630
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaaca 72  Q
    |||| ||||| |||||||||||||||||||| || ||||||| || |||||| |||||||    
T  37436689 catatgcatatacattcctatcattttattctcgtgaatcaacaaatataacatgaaaca 37436630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 30241013 - 30241075
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaac 75  Q
    |||||||||| | ||| ||||||||||||| || | |||||| || |||||||||||||||||    
T  30241013 cataggcatatatatttctatcattttattaccaaaaatcaacaaatataacttgaaacaaac 30241075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 29091688 - 29091741
Alignment:
Q  31 tatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    ||||||||||||  |  ||||||| || ||||||||||||||||||||||||||    
T  29091688 tatcattttattatcaggaatcaacaaatataacttgaaacaaacacaccctta 29091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 52699521 - 52699465
Alignment:
Q  26 attcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||||||||||||||||||  ||||| |  | ||||||||||||||||| ||||||    
T  52699521 attcctatcattttattcccaggaatctacgaatataacttgaaacaaacgcaccct 52699465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 9e-28; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 24574578 - 24574653
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagttt 88  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  24574578 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccttagttt 24574653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 28124504 - 28124436
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28124504 cataggcatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccc 28124436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 26849025 - 26849096
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  26849025 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 26849096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 40908268 - 40908337
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  40908268 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 40908337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 6231569 - 6231496
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagt 86  Q
    |||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| ||||    
T  6231569 cataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaacacacccctagt 6231496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 8476373 - 8476304
Alignment:
Q  16 aggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    ||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  8476373 aggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacacccttag 8476304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 11239188 - 11239119
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  11239188 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 11239119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 44952311 - 44952380
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  44952311 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 44952380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 9320505 - 9320448
Alignment:
Q  24 acattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  9320505 acattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 9320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 20297796 - 20297865
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  20297796 cataggcatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccct 20297865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 20414533 - 20414461
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| ||||||| ||||||||||||||   |||||| ||||||||||||||||||||||||||||||    
T  20414533 cataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaacacacccttag 20414461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 33217981 - 33217917
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    |||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||||||||    
T  33217981 cataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacac 33217917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 47114925 - 47114857
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  47114925 cataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaacacaccc 47114857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 43132225 - 43132156
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| | |||||||| ||||||||| |||||||||| || ||||||||||||||||||||||||    
T  43132225 cataggcatatatattcctattattttattctcgagaatcaacaaatataacttgaaacaaacacaccct 43132156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 1099201 - 1099267
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    |||||| ||| ||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  1099201 catagggatatacatttctatcattttattcccgggaatcaacaattataacttaaaacaaacacac 1099267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 31435991 - 31435922
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| |||||||||||||| |  ||||||| || ||||||||||||||||||||||||    
T  31435991 cataggcatatacatttctatcattttattctcaggaatcaacaaatataacttgaaacaaacacaccct 31435922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 48339825 - 48339760
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaca 78  Q
    |||||||||| |||||  ||||||||||||||||  |||||| |||||||||||||||||||||||    
T  48339825 cataggcatatacatttatatcattttattcccggaaatcaacaattataacttgaaacaaacaca 48339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 43715370 - 43715307
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||| ||||| |||||||||||||  || ||||||| |||||||||||||||||||||||||||    
T  43715370 catatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaacacaccct 43715307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 29512704 - 29512753
Alignment:
Q  35 attttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||||   ||| ||||||||||||||||||||||||||||||||    
T  29512704 attttattcccagaaattaaaaattataacttgaaacaaacacaccctta 29512753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 9320446 - 9320407
Alignment:
Q  15 taggcataaacattcctatcattttattcccgagaatcaa 54  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  9320446 taggtatatacattcctatcattttattcccgagaatcaa 9320407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 31611053 - 31611004
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattata 62  Q
    ||||| |||| ||||||| ||||||||||||||| ||||||| |||||||    
T  31611053 catagacatatacattccaatcattttattcccgggaatcaacaattata 31611004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 45826796 - 45826849
Alignment:
Q  30 ctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctt 83  Q
    ||||||||||||||||  ||||| | ||  ||||||||||||||||||||||||    
T  45826796 ctatcattttattccctggaatctacaacgataacttgaaacaaacacaccctt 45826849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 4765628 - 4765556
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  4765628 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccttag 4765556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 12970598 - 12970527
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  12970598 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 12970527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 19065573 - 19065504
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  19065573 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 19065504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 18412212 - 18412284
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  18412212 cataggcatatacattcctatcattttattcccaggaatcaataattataacttgaaacaaacacacccttag 18412284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 27481360 - 27481430
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctt 83  Q
    |||||||||| ||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  27481360 cataggcatatacattcctatcattttatttccaaaaatcaaaaattataacttgaaacaaacacaccctt 27481430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 22935980 - 22935911
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  22935980 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 22935911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 28602558 - 28602627
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  28602558 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 28602627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 555774 - 555703
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    ||||| |||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  555774 catagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 555703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 14206889 - 14206818
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||| |||||||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  14206889 cataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccctta 14206818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 29543083 - 29543011
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    ||||| |||| ||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  29543083 catagacatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaacacacccttag 29543011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 36703877 - 36703945
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    ||||| |||| ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  36703877 catagacatatacatttctatcattttattcccgataatcaacaattataacttgaaacaaacacaccc 36703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 11855723 - 11855658
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaca 78  Q
    |||||||||| |||||||||||||||||||| |  ||||||| |||||||||||||||||||||||    
T  11855723 cataggcatatacattcctatcattttattctcaggaatcaacaattataacttgaaacaaacaca 11855658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 6091718 - 6091782
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    |||||||||| |||||  |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  6091718 cataggcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaacac 6091782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 8406898 - 8406959
Alignment:
Q  14 ataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaac 75  Q
    ||||||||  |||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  8406898 ataggcatgtacattcctatcattttattctcgaaaatcaacaattataacttgaaacaaac 8406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 32535946 - 32536006
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    |||| ||||| ||||||||||||||| | ||||||| ||||||||||| ||||||||||||    
T  32535946 catatacatttctatcattttattcctgggaatcaacaattataacttaaaacaaacacac 32536006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 42012230 - 42012178
Alignment:
Q  30 ctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||||||||||||||||||||||| || |||| ||| |||||||||||||||    
T  42012230 ctatcattttattcccgagaatcaacaaatatagcttcaaacaaacacaccct 42012178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 20962606 - 20962659
Alignment:
Q  26 attcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    |||||||||||||||||||| |||||| |  | |||||||||||||||||||||    
T  20962606 attcctatcattttattcccaagaatctacgaatataacttgaaacaaacacac 20962659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 8646459 - 8646412
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaatta 60  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||||    
T  8646459 catagacatatacattcctatcattttattcccgggaatcaacaatta 8646412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 26637094 - 26637045
Alignment:
Q  30 ctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    ||||||||||||||||   |||||| || |||||||||||||||||||||    
T  26637094 ctatcattttattcccattaatcaacaaatataacttgaaacaaacacac 26637045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 35999693 - 35999765
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35999693 cataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacacccttag 35999765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 48518959 - 48518891
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48518959 cataggcatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaacacaccc 48518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 27555417 - 27555486
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27555417 catagacatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccct 27555486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 39730361 - 39730292
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39730361 catagacatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaacacaccct 39730292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 45747864 - 45747795
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  45747864 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 45747795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 25916092 - 25916032
Alignment:
Q  24 acattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25916092 acattcctatcattttattcccgggaatcaaaaattataacttgaaacaaacacaccctta 25916032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 40435907 - 40435979
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40435907 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccttag 40435979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 48879332 - 48879403
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  48879332 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 48879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 27762967 - 27762893
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagtt 87  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  27762967 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacacccatagtt 27762893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 13230057 - 13229989
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  13230057 cataggcatatacatttctatcattttattcccgggaataaaaaattataacttgaaacaaacacaccc 13229989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 6279989 - 6279918
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    ||||| |||| |||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6279989 catagacatatacattcatatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 6279918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 23686794 - 23686865
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| | ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  23686794 cataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 23686865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41859115 - 41859046
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| |||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  41859115 cataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaacacaccct 41859046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 45596275 - 45596344
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  45596275 cataggcatatacatttctatcattttattcccgaaaatcaacaattataacttgaaacaaacgcaccct 45596344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 34049665 - 34049597
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    ||||| |||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  34049665 catagacatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccc 34049597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 39835375 - 39835304
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||| ||||| |||||  |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  39835375 catatgcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 39835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 55968062 - 55967999
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  55968062 catatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 55967999  T

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Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 18405302 - 18405233
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| |||| ||||||||| || ||||||| |||||||||||||||||||||||||||    
T  18405302 cataggcatatacatttctataattttattctcgggaatcaacaattataacttgaaacaaacacaccct 18405233  T

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Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 25932448 - 25932517
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| |||||||||||||||   ||||||| |||||||||||||||||||||||||||    
T  25932448 cataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaacacaccct 25932517  T

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Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 42773955 - 42774024
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||||||||||||||||    
T  42773955 cataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaacacaccct 42774024  T

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Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 43723271 - 43723340
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| |||||||||||||  || ||||||| |||||||||||||||||||||||||||    
T  43723271 cataggcatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaacacaccct 43723340  T

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Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 27942750 - 27942814
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    ||||| |||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  27942750 catagacatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaacac 27942814  T

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Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 41744288 - 41744216
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| ||||| |||||||||||||||||  |||||| ||||||||||||||| |||||||| |||||    
T  41744288 cataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaataaacacactcttag 41744216  T

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Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 32953531 - 32953598
Alignment:
Q  14 ataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    ||||||||| |||||||||||||||| |||| | ||||||| ||||||||||||| ||||||||||||    
T  32953531 ataggcatatacattcctatcattttgttcctgggaatcaacaattataacttgagacaaacacaccc 32953598  T

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Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 39498838 - 39498901
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||| ||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  39498838 catatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccct 39498901  T

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Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 39502177 - 39502240
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||| ||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  39502177 catatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccct 39502240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 47670369 - 47670436
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    |||||||||| ||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||||    
T  47670369 cataggcatatacatttctatcattttatttccaggaatcaacaattataacttgaaacaaacacacc 47670436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 18931760 - 18931826
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    ||||| |||| ||||||||||||||||||||||   |||||| ||||||||||||||||||||||||    
T  18931760 catagacatatacattcctatcattttattcccagaaatcaacaattataacttgaaacaaacacac 18931826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 30415922 - 30415984
Alignment:
Q  26 attcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagttt 88  Q
    |||||||||||||||||  || ||||||| || ||||||||||||||||||||||||||||||    
T  30415922 attcctatcattttattatcgggaatcaacaaatataacttgaaacaaacacacccttagttt 30415984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 936133 - 936202
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||| ||| | ||||| |||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  936133 catagggatatatattccaatcattttattctcgggaatcaacaattataacttgaaacaaacacaccct 936202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 34237477 - 34237424
Alignment:
Q  24 acattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  34237477 acatttctatcattttattcccgggaatcaacaattataacttgaaacaaacac 34237424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 50672973 - 50672903
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagt 86  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||  |||||| |||||||||||||||||||    
T  50672973 catagacatatacattcctatcattttattcccg-gaatcaacaat--taacttaaaacaaacacacccttagt 50672903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 10400873 - 10400810
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||| ||||| |||||||||||||||| | |||||| || ||||||||||||||||||    
T  10400873 catagacatatacatttctatcattttattcccaaaaatcaacaaatataacttgaaacaaaca 10400810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 8322252 - 8322308
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaa 69  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||| ||||||||||||||    
T  8322252 catagacatatacatttctatcattttattcccaggaatcaacaattataacttgaa 8322308  T

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Target: scaffold0006 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 201928 - 202003
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagttt 88  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  201928 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaagttt 202003  T

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Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 7053638 - 7053567
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  7053638 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 7053567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 14171016 - 14171085
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14171016 cataggcatatagattcctatcattttattcccgggaatcaaaaattataacttgaaacaaacacaccct 14171085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2657703 - 2657774
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  2657703 cataggtatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 2657774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 8029336 - 8029407
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  8029336 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 8029407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 1317021 - 1317089
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  1317021 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 1317089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 18897924 - 18897989
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaca 78  Q
    |||||||||| ||||| |||||| |||||| ||| ||||||| |||||||||||||||||||||||    
T  18897924 cataggcatatacatttctatcactttatttccgggaatcaacaattataacttgaaacaaacaca 18897989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 7344150 - 7344078
Alignment:
Q  14 ataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagt 86  Q
    ||||||||| |||||||||||||||||||| ||  |||  | |||||||| ||||||| ||||||||||||||    
T  7344150 ataggcatatacattcctatcattttattctcggaaatttacaattataatttgaaacgaacacacccttagt 7344078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 16968928 - 16968989
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaa 74  Q
    ||||| |||| | |||||||||||||||||| |  ||||||| |||||||||||||||||||    
T  16968928 catagacatatagattcctatcattttattctcaggaatcaacaattataacttgaaacaaa 16968989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 3869525 - 3869582
Alignment:
Q  30 ctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagtt 87  Q
    ||||||||||||||||   |||| | ||  ||||||||||||||||||||||||||||    
T  3869525 ctatcattttattcccagaaatctacaaaaataacttgaaacaaacacacccttagtt 3869582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 6705833 - 6705764
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| | ||| ||| |||||||||||   ||||||| || ||||||||||||||||||||||||    
T  6705833 catagacatatatatttctaccattttattccaatgaatcaacaaatataacttgaaacaaacacaccct 6705764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 10246255 - 10246222
Alignment:
Q  48 gaatcaaaaattataacttgaaacaaacacaccc 81  Q
    ||||||| ||||||||||||||||||||||||||    
T  10246255 gaatcaacaattataacttgaaacaaacacaccc 10246222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 346413 - 346342
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  346413 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 346342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 39995199 - 39995128
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  39995199 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 39995128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 6171794 - 6171865
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||    
T  6171794 cataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaacacaccctta 6171865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 11071608 - 11071679
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  11071608 cataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccctta 11071679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 37533955 - 37534030
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagttt 88  Q
    ||||| |||| |||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  37533955 catagacatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacacccttagttt 37534030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 42674729 - 42674655
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagtt 87  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  42674729 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaagtt 42674655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 21737468 - 21737399
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  21737468 catagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 21737399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41729198 - 41729129
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||||||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  41729198 cataggcatatccattcctatcattttattcccgggaataaaaaattataacttgaaacaaacacaccct 41729129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 9733914 - 9733846
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  9733914 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 9733846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 14777566 - 14777494
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  14777566 cataggcatatacattccaatcattttattcccgggaatcaacaattataaattgaaacaaacacacccttag 14777494  T

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Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 5770178 - 5770108
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctt 83  Q
    |||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||||| ||||||    
T  5770178 cataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaacataccctt 5770108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 34356768 - 34356699
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  34356768 catagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 34356699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 40950927 - 40950858
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||| ||||| | ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40950927 cataagcatatatatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccct 40950858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2050869 - 2050940
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||| ||| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||    
T  2050869 cataggtatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaacacacactta 2050940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2521678 - 2521749
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||| |||||||||||  || ||||||| |||||||||||||||||||||||||||||    
T  2521678 cataggcatatacattccaatcattttattttcgggaatcaacaattataacttgaaacaaacacaccctta 2521749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 13760961 - 13761019
Alignment:
Q  26 attcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  13760961 attcctatcattttattcccgaaaatcaataattataacttgaaacaaacacatcctta 13761019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 37192525 - 37192591
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    ||||| |||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  37192525 catagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacac 37192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 4559562 - 4559631
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| ||||||||||||  | ||||||| |||||||||||||||||||||||||||    
T  4559562 cataggcatatacattccaatcattttattcttgggaatcaacaattataacttgaaacaaacacaccct 4559631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 20426551 - 20426482
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| | ||||||||||||||||||||| ||||||| || ||||| ||||||||||||||||||    
T  20426551 cataggcatataaattcctatcattttattcccgggaatcaacaaatataatttgaaacaaacacaccct 20426482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 28311765 - 28311701
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    |||||||||| | ||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  28311765 cataggcatatatattcctatcattttattcccgggaatcaacaaatataacttgaaacaaacac 28311701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 41750532 - 41750599
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    |||||||||| ||||| |||||||||||||||   ||||||| |||||||||||||||||||||||||    
T  41750532 cataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaacacacc 41750599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 45409253 - 45409324
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| |||||||||||||||||| |  | ||||||| || ||||||||||||||||||||||||||    
T  45409253 cataggcatatacattcctatcattttatacttgggaatcaacaaatataacttgaaacaaacacaccctta 45409324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 17965986 - 17966055
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||||| |||||||||||  || ||||||| |||||||||||||||||||||||||||    
T  17965986 catagacatatacattccaatcattttattatcgggaatcaacaattataacttgaaacaaacacaccct 17966055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 638596 - 638660
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    ||||| |||| ||||||||||||||||||| |||  |||||| ||||||||||||||||||||||    
T  638596 catagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaacac 638660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 37233432 - 37233496
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    |||||||||| |  |||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  37233432 cataggcatatatgttcctatcattttattcccgggaatcaacaaatataacttgaaacaaacac 37233496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 27358031 - 27357960
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    ||||| |||| |||| ||||||||||||| || | ||||||| || ||||||||||||||||||||||||||    
T  27358031 catagacatatacatccctatcattttatacctgggaatcaacaaatataacttgaaacaaacacaccctta 27357960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 26310273 - 26310335
Alignment:
Q  14 ataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaaca 76  Q
    |||| |||| ||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  26310273 atagacatatacatttctatcattttattcccgggaatcaacaattataactttaaacaaaca 26310335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 6571690 - 6571762
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||| | ||||||||||||||||| |||  |||||| || |||||||| ||||||| ||||||||||    
T  6571690 cataggcatatatattcctatcattttatttccggaaatcaacaaatataactttaaacaaatacacccttag 6571762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 40570045 - 40570095
Alignment:
Q  35 attttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||||||||  ||||| | ||||||||||||||||||||||||||||||    
T  40570045 attttattcccaggaatctacaattataacttgaaacaaacacacccttag 40570095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 14832813 - 14832877
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    |||||||||| | ||| |||||||||||||||   ||||||| || |||||||||||||||||||    
T  14832813 cataggcatatatatttctatcattttattcctaggaatcaacaaatataacttgaaacaaacac 14832877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 7007595 - 7007645
Alignment:
Q  32 atcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||| |||||||| || |||||||||||| |||||||||||    
T  7007595 atcattttatccccaagaatcaacaaatataacttgaaataaacacaccct 7007645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 14253525 - 14253578
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataactt 66  Q
    ||||| |||| | ||| ||||||||||||||||||||||||| || ||||||||    
T  14253525 catagacatatatatttctatcattttattcccgagaatcaacaaatataactt 14253578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 18713725 - 18713660
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaca 78  Q
    |||||||||| | |||  |||||||||||| ||  ||||||| || ||||||||||||||||||||    
T  18713725 cataggcatatatatttatatcattttattaccatgaatcaacaaatataacttgaaacaaacaca 18713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 1988314 - 1988382
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||  | ||| ||||||||||||||||   |||||| || |||||||| ||||||||||||||    
T  1988314 cataggcatgtatatttctatcattttattcccagaaatcaacaaatataacttcaaacaaacacaccc 1988382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 9e-25; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 25098076 - 25098142
Alignment:
Q  17 ggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctt 83  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25098076 ggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaacacaccctt 25098142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 9947058 - 9946989
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  9947058 cataggcatatacattcctatcattttattcccgggaatcaaaaattataactttaaacaaacacaccct 9946989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 33378845 - 33378914
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  33378845 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 33378914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 39554186 - 39554259
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagt 86  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  39554186 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccttagt 39554259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 48314125 - 48314194
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  48314125 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 48314194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 40212892 - 40212960
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  40212892 cataggcatatacattcctatcattttattcccgcgaatcaacaattataacttgaaacaaacacaccc 40212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 8419657 - 8419586
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  8419657 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctta 8419586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 45265116 - 45265049
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45265116 cataggcatatacattccaatcattttattcccgagaatcaacaattataacttgaaacaaacacacc 45265049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 27213923 - 27213853
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctt 83  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  27213923 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctt 27213853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 11329996 - 11330065
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  11329996 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 11330065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 27248296 - 27248365
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  27248296 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 27248365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 45045629 - 45045698
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  45045629 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttaaaacaaacacaccct 45045698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 45448956 - 45449009
Alignment:
Q  24 acattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45448956 acattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 45449009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 48160659 - 48160590
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  48160659 catagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 48160590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 48341365 - 48341430
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaca 78  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  48341365 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacaca 48341430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 38544197 - 38544265
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  38544197 cataggcatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccc 38544265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 9814280 - 9814217
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  9814280 catatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 9814217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 25924705 - 25924634
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  25924705 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacataccctta 25924634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 27419292 - 27419221
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  27419292 cataggcatatacatttctatcattttattcccgggaatcagcaattataacttgaaacaaacacaccctta 27419221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 43949248 - 43949315
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  43949248 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacc 43949315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 35488257 - 35488188
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| |||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  35488257 cataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaacacaccct 35488188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 38396434 - 38396370
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  38396434 catagacatatacattcctatcattttattcccgggaatcaacaattataacttggaacaaacac 38396370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 44566048 - 44566116
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    ||||| |||| ||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||    
T  44566048 catagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaacacaccc 44566116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 41632432 - 41632365
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    |||||||||| ||||| |||||||||||||| |  ||||||| |||||||||||||||||||||||||    
T  41632432 cataggcatatacatttctatcattttattctcaggaatcaacaattataacttgaaacaaacacacc 41632365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 45723211 - 45723277
Alignment:
Q  14 ataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    ||||||||| | |||||||||||||||||| || ||||||| || ||||||||||||||||||||||    
T  45723211 ataggcatatatattcctatcattttattctcgggaatcaacaaatataacttgaaacaaacacacc 45723277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 16825422 - 16825353
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| |||||||||||||||   |||| || |||||||||||||||||||||||||||    
T  16825422 cataggcatatacatttctatcattttattcctaggaattaacaattataacttgaaacaaacacaccct 16825353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 18824166 - 18824227
Alignment:
Q  30 ctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagtttgga 91  Q
    |||||||||||||||| | |||||| || || ||||||||||||||||||||||||||||||    
T  18824166 ctatcattttattcccaaaaatcaacaaatacaacttgaaacaaacacacccttagtttgga 18824227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28904254 - 28904185
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||| |||||||||||||| || ||||||| ||||||||||| |||||||||||||||    
T  28904254 catagacatatacatttctatcattttattctcgggaatcaacaattataacttaaaacaaacacaccct 28904185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 34930534 - 34930466
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataac-ttgaaacaaacacacc 80  Q
    |||||||||| ||||| ||||||||||||||||  ||||||| ||||||||| ||||||||||||||||    
T  34930534 cataggcatatacatttctatcattttattcccaggaatcaacaattataactttgaaacaaacacacc 34930466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 44820268 - 44820323
Alignment:
Q  24 acattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    ||||| ||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  44820268 acatttctatcattttattcctgaaaatcaacaattataacttgaaacaaacacac 44820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 31921813 - 31921743
Alignment:
Q  15 taggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagt 86  Q
    |||||||| | ||| ||||||||||||| |||| ||| || || ||||||||||||||||||||||||||||    
T  31921813 taggcatatatatttctatcattttatttccga-aatgaacaaatataacttgaaacaaacacacccttagt 31921743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 45440933 - 45440979
Alignment:
Q  35 attttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||    
T  45440933 attttattcccaagaatctacaattataacttgaaacaaacacaccc 45440979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 25045685 - 25045617
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||| ||||| | ||||||||| |||||| ||| |||||||| || ||||||||||||||||||||||||    
T  25045685 catatgcatatatattcctatctttttatcccc-agaatcaacaaatataacttgaaacaaacacaccct 25045617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 6656292 - 6656226
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    |||||| ||| | |||| |||||||||||| || | |||||| || |||||||||||||||||||||    
T  6656292 cataggtatatatattcatatcattttatttccaaaaatcaacaaatataacttgaaacaaacacac 6656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 41684073 - 41684021
Alignment:
Q  30 ctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||||| |||||| |  ||||||| || ||||||||||||||||||||||||    
T  41684073 ctatcatattattctcaggaatcaacaaatataacttgaaacaaacacaccct 41684021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 18298115 - 18298183
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18298115 cataggtatatacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaaaccc 18298183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 18726687 - 18726619
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  18726687 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 18726619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 26062147 - 26062219
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttag 85  Q
    |||||| ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26062147 cataggaatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacacccttag 26062219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 32661001 - 32660930
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  32661001 cataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaacacaccctta 32660930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 1554422 - 1554353
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  1554422 catagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 1554353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 12710648 - 12710717
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12710648 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 12710717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 25837914 - 25837983
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  25837914 cataggcatgtacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 25837983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 35818492 - 35818423
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  35818492 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 35818423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 37392614 - 37392545
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  37392614 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaatacaccct 37392545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 38132805 - 38132736
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38132805 catagacatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccct 38132736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 38364084 - 38364153
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  38364084 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 38364153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 26602006 - 26601935
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||    
T  26602006 cataggcatatacattcctatcattttattcccgggaatcaacaattataatttgaaacaaacacatcctta 26601935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 3050012 - 3050074
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaac 75  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  3050012 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaac 3050074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 16313575 - 16313506
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||| ||| |||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  16313575 cataggtatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccct 16313506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 10896285 - 10896217
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||||||||| ||||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  10896285 cataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaacacaccc 10896217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 41228780 - 41228713
Alignment:
Q  15 taggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    |||||||| ||||||||| ||||||||||||| |||| || |||||||||||||||||||||||||||    
T  41228780 taggcatatacattcctaccattttattcccgggaattaacaattataacttgaaacaaacacaccct 41228713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 42755870 - 42755937
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    |||||||||| ||||| ||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  42755870 cataggcatatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaacacacc 42755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 7317376 - 7317449
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacacccttagt 86  Q
    |||||||||| | |||||||||||||||||   || |||||| || ||||||||||||||||||||||||||||    
T  7317376 cataggcatatatattcctatcattttatttttgaaaatcaacaaatataacttgaaacaaacacacccttagt 7317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 7931248 - 7931306
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacac 77  Q
    |||| ||||| ||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  7931248 catatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaacac 7931306  T

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Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 40197138 - 40197076
Alignment:
Q  19 cataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacaccc 81  Q
    |||| ||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||| ||||    
T  40197138 catatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaacataccc 40197076  T

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Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 5020543 - 5020492
Alignment:
Q  28 tcctatcattttattcccgagaatcaaaaattataacttgaaacaaacacac 79  Q
    ||||||||||||||||||  ||||||| || |||||||||||||||||||||    
T  5020543 tcctatcattttattcccatgaatcaacaaatataacttgaaacaaacacac 5020492  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 33444676 - 33444627
Alignment:
Q  31 tatcattttattcccgagaatcaaaaattataacttgaaacaaacacacc 80  Q
    ||||||||||||| |  ||||||| || ||||||||||||||||||||||    
T  33444676 tatcattttattctcaggaatcaacaaatataacttgaaacaaacacacc 33444627  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 35394413 - 35394462
Alignment:
Q  33 tcattttattcccgagaatcaaaaattataacttgaaacaaacacaccct 82  Q
    ||||||||||| || ||||||| || |||||||||||||||||| |||||    
T  35394413 tcattttattctcgtgaatcaataaatataacttgaaacaaacaaaccct 35394462  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 8635672 - 8635708
Alignment:
Q  48 gaatcaaaaattataacttgaaacaaacacaccctta 84  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  8635672 gaatcaacaattataacttgaaacaaacacactctta 8635708  T

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Target: scaffold0189 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 29020 - 28957
Alignment:
Q  13 cataggcataaacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  29020 cataggcatatacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaaca 28957  T

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