View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15672_low_34 (Length: 333)
Name: NF15672_low_34
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15672_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 9 - 318
Target Start/End: Original strand, 43860391 - 43860702
Alignment:
| Q |
9 |
tagattatactttaagtagcttggtaatcaagt---tatgcataatgtttatttttaacatggannnnnnnngaaaacagacttaattaaacgtacctga |
105 |
Q |
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|||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
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| T |
43860391 |
tagactatattttaagtagcttggtaatcaagtatttatgcataatgtttatttttaacatggattttttt-gaaaacagacttaattaaatgtacctga |
43860489 |
T |
|
| Q |
106 |
taatacaaccaagtcatgaagagtaagctttttattagcaaagatttgtctgagctgtgtgatgttatggaaaggtgccgggatattgattagggcttca |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860490 |
taatacaaccaagtcatgaagagtaagctttttattagcaaagatttgtctgagctgtgtgatgttatggaaaggtgccgggatattgattagggcttca |
43860589 |
T |
|
| Q |
206 |
atgcttctggacacagtaccatctcttctacccgtaagtacttcccaatttggtttattcttaaactgtaataaaaaatatgaatgaatcaatatgatgc |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43860590 |
atgcttctggacacagtaccatctcttctacccgtaagcacttcccaatttggtttattcttaaactgtaataaaaaatatgaatgaatcaatatgatgc |
43860689 |
T |
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| Q |
306 |
tacatgcataaat |
318 |
Q |
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||||||||||||| |
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| T |
43860690 |
tacatgcataaat |
43860702 |
T |
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