View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15672_low_35 (Length: 323)
Name: NF15672_low_35
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15672_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 11 - 306
Target Start/End: Complemental strand, 52584904 - 52584609
Alignment:
| Q |
11 |
agaatatatactatactagcttttttgctcaaatagtttcttcagtacgtaaaaaacagtgttgattcgattcgattcgattccccctttcactcctttt |
110 |
Q |
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| T |
52584904 |
agaatatatactatactagcttttttgctcaaatagtttcttcagtacgtaaaaaacagtgttgattcgattcgattcgattccccctttcactcctttt |
52584805 |
T |
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| Q |
111 |
ctctttttccataaaaatctctcttctttcactgttctagagagatccacatcacaaaactcacatgcttcatttttccaattgagttgttcccttaagg |
210 |
Q |
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| T |
52584804 |
ctccttttccataaaaatctctcttctttcactgttctagagagatccacatcacaaaactcacatgcttcatttttccaattgagttgttcccttaagg |
52584705 |
T |
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| Q |
211 |
gacacaatacaatacaagtatagaactagtttattttttcaatcactttctctcagacnnnnnnngctagctacaattaatgatgtcaaactccat |
306 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
52584704 |
gacacaatacaatacaagtatagaactagtttatttattcaatcactttctctcagacaaaaaaagctagctacaattaatgatgtcaaactccat |
52584609 |
T |
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