View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15672_low_52 (Length: 237)

Name: NF15672_low_52
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15672_low_52
NF15672_low_52
[»] chr5 (21 HSPs)
chr5 (11-237)||(14285220-14285444)
chr5 (11-157)||(14292317-14292463)
chr5 (194-237)||(26078025-26078068)
chr5 (191-237)||(7918440-7918486)
chr5 (16-157)||(15011769-15011916)
chr5 (191-237)||(18595972-18596018)
chr5 (195-237)||(34984865-34984907)
chr5 (191-237)||(37258337-37258383)
chr5 (177-237)||(25627116-25627171)
chr5 (191-237)||(18974019-18974065)
chr5 (194-237)||(5156099-5156142)
chr5 (106-157)||(15055421-15055472)
chr5 (191-234)||(31074294-31074337)
chr5 (204-237)||(13038567-13038600)
chr5 (17-78)||(15025161-15025222)
chr5 (18-67)||(15930974-15931023)
chr5 (204-237)||(16773866-16773899)
chr5 (204-237)||(27498844-27498877)
chr5 (204-237)||(34310193-34310226)
chr5 (204-237)||(37495098-37495131)
chr5 (204-237)||(38684259-38684292)
[»] chr6 (17 HSPs)
chr6 (191-237)||(11306145-11306191)
chr6 (191-237)||(12188274-12188320)
chr6 (191-237)||(13330146-13330192)
chr6 (204-237)||(11448922-11448955)
chr6 (191-222)||(19637970-19638001)
chr6 (191-237)||(23910084-23910128)
chr6 (191-237)||(15951273-15951319)
chr6 (204-237)||(654259-654292)
chr6 (204-237)||(1344986-1345019)
chr6 (204-237)||(3222748-3222781)
chr6 (204-237)||(6691535-6691568)
chr6 (204-237)||(9239026-9239059)
chr6 (204-237)||(12390476-12390509)
chr6 (204-237)||(13753291-13753324)
chr6 (204-237)||(14212943-14212976)
chr6 (204-237)||(15360211-15360244)
chr6 (191-235)||(3925805-3925849)
[»] chr4 (34 HSPs)
chr4 (191-237)||(37109322-37109368)
chr4 (191-237)||(4249236-4249282)
chr4 (191-237)||(15180797-15180843)
chr4 (191-237)||(38869827-38869873)
chr4 (191-235)||(7292769-7292813)
chr4 (191-234)||(6666397-6666440)
chr4 (191-237)||(23378015-23378061)
chr4 (191-235)||(2185003-2185047)
chr4 (194-237)||(20770970-20771013)
chr4 (191-237)||(16581752-16581798)
chr4 (191-237)||(19680759-19680805)
chr4 (191-237)||(33632107-33632153)
chr4 (191-237)||(44194955-44195001)
chr4 (204-237)||(9517754-9517787)
chr4 (204-237)||(34844871-34844904)
chr4 (204-237)||(40058965-40058998)
chr4 (204-237)||(49287909-49287942)
chr4 (185-237)||(4923609-4923661)
chr4 (204-236)||(5609315-5609347)
chr4 (204-235)||(2622379-2622410)
chr4 (193-236)||(10048040-10048083)
chr4 (203-237)||(28635755-28635789)
chr4 (203-237)||(51622544-51622578)
chr4 (204-237)||(2351064-2351097)
chr4 (204-237)||(7949438-7949471)
chr4 (204-237)||(13873408-13873441)
chr4 (204-237)||(22630299-22630332)
chr4 (204-237)||(25852265-25852298)
chr4 (204-237)||(27528908-27528941)
chr4 (204-237)||(33992677-33992710)
chr4 (204-237)||(51535664-51535697)
chr4 (204-237)||(52983670-52983703)
chr4 (191-235)||(1730460-1730504)
chr4 (203-235)||(2732055-2732087)
[»] chr1 (28 HSPs)
chr1 (191-237)||(2799921-2799967)
chr1 (191-237)||(8177153-8177199)
chr1 (191-237)||(8904473-8904519)
chr1 (191-237)||(33700744-33700790)
chr1 (191-237)||(40810526-40810572)
chr1 (191-234)||(32524393-32524436)
chr1 (191-229)||(3679285-3679323)
chr1 (191-237)||(29753708-29753754)
chr1 (191-237)||(36371529-36371575)
chr1 (194-235)||(9165169-9165210)
chr1 (194-237)||(1247172-1247215)
chr1 (191-237)||(11063615-11063661)
chr1 (191-237)||(50920013-50920059)
chr1 (204-237)||(8077698-8077731)
chr1 (204-237)||(9500468-9500501)
chr1 (204-237)||(15059515-15059548)
chr1 (204-237)||(18646904-18646937)
chr1 (201-237)||(3265983-3266019)
chr1 (198-237)||(15786298-15786337)
chr1 (202-236)||(42858619-42858653)
chr1 (203-237)||(51814553-51814587)
chr1 (204-237)||(168252-168285)
chr1 (204-237)||(4621350-4621383)
chr1 (204-237)||(24122074-24122107)
chr1 (204-237)||(24674444-24674477)
chr1 (191-232)||(33981134-33981175)
chr1 (204-237)||(45859156-45859189)
chr1 (204-237)||(46607861-46607894)
[»] chr7 (31 HSPs)
chr7 (191-237)||(26459381-26459427)
chr7 (191-237)||(39631903-39631949)
chr7 (191-237)||(29785272-29785318)
chr7 (191-237)||(33222429-33222475)
chr7 (191-237)||(37162321-37162367)
chr7 (191-237)||(43215243-43215289)
chr7 (193-237)||(33869418-33869462)
chr7 (191-237)||(7744083-7744129)
chr7 (191-237)||(17113854-17113900)
chr7 (191-237)||(21570003-21570049)
chr7 (195-237)||(25655203-25655245)
chr7 (204-237)||(21558187-21558220)
chr7 (204-237)||(41907626-41907659)
chr7 (191-234)||(2962521-2962564)
chr7 (194-237)||(7799935-7799978)
chr7 (204-237)||(654817-654850)
chr7 (204-237)||(2751326-2751359)
chr7 (204-237)||(4566412-4566445)
chr7 (204-237)||(7175975-7176008)
chr7 (204-237)||(7275332-7275365)
chr7 (204-237)||(11997904-11997937)
chr7 (204-237)||(17212108-17212141)
chr7 (204-237)||(22119943-22119976)
chr7 (204-237)||(28647024-28647057)
chr7 (204-237)||(29861725-29861758)
chr7 (204-237)||(30579394-30579427)
chr7 (204-237)||(40543023-40543056)
chr7 (201-237)||(11700224-11700259)
chr7 (201-237)||(13106763-13106799)
chr7 (177-237)||(18363755-18363810)
chr7 (191-227)||(21570082-21570118)
[»] chr3 (32 HSPs)
chr3 (191-237)||(10969888-10969934)
chr3 (191-237)||(15048032-15048078)
chr3 (191-237)||(28703375-28703421)
chr3 (191-237)||(30311365-30311411)
chr3 (191-237)||(53413004-53413050)
chr3 (198-237)||(37788443-37788482)
chr3 (191-237)||(34062519-34062565)
chr3 (177-237)||(40063678-40063735)
chr3 (191-237)||(46518687-46518733)
chr3 (201-237)||(10445120-10445156)
chr3 (193-237)||(10828706-10828750)
chr3 (191-222)||(7975499-7975530)
chr3 (198-237)||(20501755-20501794)
chr3 (202-237)||(27093343-27093378)
chr3 (204-235)||(53234023-53234054)
chr3 (198-236)||(16354870-16354908)
chr3 (191-237)||(27259220-27259266)
chr3 (191-237)||(46552990-46553036)
chr3 (204-237)||(2511410-2511443)
chr3 (204-237)||(8456263-8456296)
chr3 (204-237)||(26108343-26108376)
chr3 (204-237)||(30807266-30807299)
chr3 (204-237)||(35492962-35492995)
chr3 (204-237)||(39041965-39041998)
chr3 (204-237)||(40940876-40940909)
chr3 (204-237)||(46576399-46576432)
chr3 (204-237)||(52455762-52455795)
chr3 (204-237)||(52821748-52821781)
chr3 (201-237)||(3427534-3427570)
chr3 (201-237)||(34622522-34622558)
chr3 (191-235)||(37051265-37051309)
chr3 (203-235)||(51222183-51222215)
[»] chr2 (23 HSPs)
chr2 (191-237)||(40416361-40416407)
chr2 (191-237)||(42922474-42922520)
chr2 (191-234)||(4060185-4060228)
chr2 (191-237)||(2750597-2750643)
chr2 (191-237)||(13803554-13803600)
chr2 (191-237)||(14500336-14500382)
chr2 (191-237)||(34041559-34041605)
chr2 (191-237)||(45026802-45026848)
chr2 (201-237)||(19244168-19244204)
chr2 (194-237)||(21303968-21304011)
chr2 (191-233)||(30410520-30410562)
chr2 (191-237)||(19322827-19322873)
chr2 (204-237)||(10582103-10582136)
chr2 (204-237)||(17324817-17324850)
chr2 (204-237)||(25293217-25293250)
chr2 (204-237)||(28194246-28194279)
chr2 (204-237)||(30466943-30466976)
chr2 (204-237)||(33569842-33569875)
chr2 (204-237)||(33827686-33827719)
chr2 (204-237)||(43374438-43374471)
chr2 (204-237)||(44976267-44976300)
chr2 (205-237)||(9318060-9318092)
chr2 (177-237)||(11062419-11062474)
[»] chr8 (22 HSPs)
chr8 (194-237)||(18540357-18540400)
chr8 (198-237)||(33017273-33017312)
chr8 (177-237)||(12988487-12988542)
chr8 (191-223)||(29956367-29956399)
chr8 (203-237)||(3174788-3174822)
chr8 (191-237)||(6569742-6569788)
chr8 (198-236)||(8794323-8794361)
chr8 (203-237)||(13129727-13129761)
chr8 (191-237)||(42740553-42740599)
chr8 (204-237)||(3734736-3734769)
chr8 (204-237)||(4718700-4718733)
chr8 (204-237)||(6536579-6536612)
chr8 (204-237)||(6953120-6953153)
chr8 (204-237)||(14633009-14633042)
chr8 (204-237)||(15259519-15259552)
chr8 (204-237)||(28193529-28193562)
chr8 (204-237)||(32879334-32879367)
chr8 (204-237)||(34237768-34237801)
chr8 (204-237)||(35690048-35690081)
chr8 (204-237)||(39349311-39349344)
chr8 (191-235)||(16317671-16317715)
chr8 (191-237)||(38898492-38898535)
[»] scaffold0238 (1 HSPs)
scaffold0238 (202-237)||(2693-2728)
[»] scaffold0180 (1 HSPs)
scaffold0180 (198-237)||(19940-19979)
[»] scaffold0004 (1 HSPs)
scaffold0004 (191-237)||(81535-81581)
[»] scaffold0576 (1 HSPs)
scaffold0576 (204-237)||(5195-5228)
[»] scaffold0199 (1 HSPs)
scaffold0199 (204-237)||(8520-8553)
[»] scaffold0070 (2 HSPs)
scaffold0070 (204-237)||(40376-40409)
scaffold0070 (198-235)||(42498-42535)
[»] scaffold0026 (1 HSPs)
scaffold0026 (204-237)||(97479-97512)
[»] scaffold0019 (1 HSPs)
scaffold0019 (204-237)||(161860-161893)
[»] scaffold0006 (1 HSPs)
scaffold0006 (201-237)||(18358-18394)


Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 14285444 - 14285220
Alignment:
Q  11 cacagaataggacaaacattcattaaaatataaaatgattaagtaacaaaaattcatcattgacatttatgcgtgaactaaaataaatttctagtttaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14285444 cacagaataggacaaacattcattaaaatataaaatgattaagtaccaaaaattcatcattgacatttatgcgtgaactaaaataaatttctagtttaaa 14285345  T
Q  111 ggagtatgcaaaattcaaaaaggaaagagaaccattatagcttgaaacnnnnnnnnnnnnnnnnnngaagaagctaaactaactaaccccctcaaattgg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||                  ||||| ||||||||||||||||||||||||||||    
T  14285344 ggagtatgcaaaattcaaaaaggaaagagaaccattatagcttgaaac--ttttttttttttttttgaagaggctaaactaactaaccccctcaaattgg 14285247  T
Q  211 caccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||    
T  14285246 caccagagagaatcgaacctgagacct 14285220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 14292463 - 14292317
Alignment:
Q  11 cacagaataggacaaacattcattaaaatataaaatgattaagtaacaaaaattcatcattgacatttatgcgtgaactaaaataaatttctagtttaaa 110  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||||| ||||| | ||    
T  14292463 cacagaataggacaaacattcgttaaaagataaaatgattaagtaccaaaagttcatcatagacatttctgcgtgaactaaaataaattcctagtctgaa 14292364  T
Q  111 ggagtatgcaaaattcaaaaaggaaagagaaccattatagcttgaaa 157  Q
    || || ||||||||||||  ||| |||||||||| | ||||||||||    
T  14292363 ggggtttgcaaaattcaatcagggaagagaaccactctagcttgaaa 14292317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 26078025 - 26078068
Alignment:
Q  194 taaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  26078025 taaccccctcaaattggcactagagagaatcgaacctgagacct 26078068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 7918440 - 7918486
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  7918440 aactaaacccctcaaattggcaccagagagaatcgaacctaagacct 7918486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 157
Target Start/End: Complemental strand, 15011916 - 15011769
Alignment:
Q  16 aataggacaaacattcattaaaatataaaatgattaagtaacaaaaattcatcattgacatttatgcgtgaactaaaat-------aaatttctagttta 108  Q
    |||| |||||||| || |||| | |||||||||||  ||| | ||||||||| ||||||||||||| | ||||||||||       ||||| | || |||    
T  15011916 aataagacaaacactcgttaatagataaaatgattcggtaccgaaaattcatgattgacatttatgtgagaactaaaataatttcaaaattcccagctta 15011817  T
Q  109 aaggagtatgcaaaattcaaaaaggaaagagaaccattatagcttgaaa 157  Q
    |||| || ||||||||||||||||||||| ||| |||| ||||||||||    
T  15011816 aaggggtttgcaaaattcaaaaaggaaag-gaatcattctagcttgaaa 15011769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 18595972 - 18596018
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  18595972 aactaaccccctcaaattggcaccagagaaaatcgaacctaagacct 18596018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 34984907 - 34984865
Alignment:
Q  195 aaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  34984907 aaccccctcaaattggcaccagagagaatcgaacctaagacct 34984865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 37258337 - 37258383
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  37258337 aactaaccccctcaaattgacaccagagagaatcgaacctgaaacct 37258383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 25627171 - 25627116
Alignment:
Q  177 gaagaagctaaactaactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||     ||||||||||| |||||||||||||||||||||||||||    
T  25627171 gaagaagctaaactaac-----ccctcaaattgacaccagagagaatcgaacctgagacct 25627116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 18974065 - 18974019
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  18974065 aactaacccactcaaattggcaccagggagaatcgaacctgacacct 18974019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 5156099 - 5156142
Alignment:
Q  194 taaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||    
T  5156099 taaccctctcaaattgacaccagagagaatcgaatctgagacct 5156142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 15055421 - 15055472
Alignment:
Q  106 ttaaaggagtatgcaaaattcaaaaaggaaagagaaccattatagcttgaaa 157  Q
    |||||||||| | ||||| | ||||||||| |||||||||||||||||||||    
T  15055421 ttaaaggagtttacaaaaataaaaaaggaatgagaaccattatagcttgaaa 15055472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 31074337 - 31074294
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgaga 234  Q
    |||||| || || |||||||||||||||||||||||||||||||    
T  31074337 aactaatcctcttaaattggcaccagagagaatcgaacctgaga 31074294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 13038567 - 13038600
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  13038567 aaattggcaccagagggaatcgaacctgagacct 13038600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 15025222 - 15025161
Alignment:
Q  17 ataggacaaacattcattaaaatataaaatgattaagtaacaaaaattcatcattgacattt 78  Q
    ||||||||||||  |||||||| ||||||||||| | || ||||||||||  ||||||||||    
T  15025222 ataggacaaacacacattaaaagataaaatgattcaataccaaaaattcagtattgacattt 15025161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 15930974 - 15931023
Alignment:
Q  18 taggacaaacattcattaaaatataaaatgattaagtaacaaaaattcat 67  Q
    ||||||||||||| ||||||| ||||||||||| |||  |||||||||||    
T  15930974 taggacaaacattgattaaaagataaaatgattcagtgccaaaaattcat 15931023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 16773899 - 16773866
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| ||||||||||||||||||||||||    
T  16773899 aaattggcatcagagagaatcgaacctgagacct 16773866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 27498844 - 27498877
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  27498844 aaattggcaccagagggaatcgaacctgagacct 27498877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 34310226 - 34310193
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  34310226 aaattggcaccagagggaatcgaacctgagacct 34310193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 37495131 - 37495098
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  37495131 aaattggcaccagagggaatcgaacctgagacct 37495098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 38684292 - 38684259
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  38684292 aaattggcaccagagggaatcgaacctgagacct 38684259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 11306145 - 11306191
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11306145 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 11306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 12188274 - 12188320
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  12188274 aactaaccccctcaaattggcactagagagaatcgaacttgaaacct 12188320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 13330192 - 13330146
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||    
T  13330192 aactaaccctctcaaattggcacaagagagaatcgaatctgagacct 13330146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 11448955 - 11448922
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  11448955 aaattggcaccagagagaatcgaacctgagacct 11448922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 19637970 - 19638001
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaa 222  Q
    ||||||||||||||||||||||||||||||||    
T  19637970 aactaaccccctcaaattggcaccagagagaa 19638001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 23910084 - 23910128
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  23910084 aactaaccccctcaaattggcacc--agagattcgaacctgagacct 23910128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 15951273 - 15951319
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| |||||||||| |||||||||||| |||| ||||||||    
T  15951273 aactaaccctctcaaattggtaccagagagaattgaacatgagacct 15951319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 654259 - 654292
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  654259 aaattggcaccagagggaatcgaacctgagacct 654292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 1345019 - 1344986
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  1345019 aaattggcaccagagggaatcgaacctgagacct 1344986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 3222748 - 3222781
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  3222748 aaattggcaccagagggaatcgaacctgagacct 3222781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 6691535 - 6691568
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||| ||||||||||||||||||||||    
T  6691535 aaattggcaccggagagaatcgaacctgagacct 6691568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 9239059 - 9239026
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  9239059 aaattggcaccagagggaatcgaacctgagacct 9239026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 12390509 - 12390476
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  12390509 aaattggcaccagagggaatcgaacctgagacct 12390476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 13753324 - 13753291
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||| |||||||||||||    
T  13753324 aaattggcaccagagagaattgaacctgagacct 13753291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 14212976 - 14212943
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  14212976 aaattggcaccagagggaatcgaacctgagacct 14212943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 15360211 - 15360244
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  15360211 aaattggcaccagagggaatcgaacctgagacct 15360244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 3925849 - 3925805
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagac 235  Q
    |||||||||||||||||||  |||||||||||| ||| |||||||    
T  3925849 aactaaccccctcaaattgataccagagagaattgaatctgagac 3925805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 37109322 - 37109368
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37109322 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 37109368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 4249282 - 4249236
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  4249282 aactaaccccctcaaattggcaccagagagaatcaaacctgagacct 4249236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 15180843 - 15180797
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  15180843 aactaaccccctcaaattggcaccagagagaatcgaacctaagacct 15180797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 38869873 - 38869827
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  38869873 aactaaccccctcaaattggcaccagagggaatcgaacctgagacct 38869827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 7292769 - 7292813
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagac 235  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  7292769 aactaaccccctcaaattggcactagagagaatcgaacctgagac 7292813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 6666397 - 6666440
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgaga 234  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  6666397 aactaaccccctcaaatgggcaccagagagaatcgaacctgaga 6666440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 23378061 - 23378015
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  23378061 aactagccccctcaaattggcactagagagaatcgaacctgagacct 23378015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 2185003 - 2185047
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagac 235  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  2185003 aactaaccccctcaaattggcatcggagagaatcgaacctgagac 2185047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 20771013 - 20770970
Alignment:
Q  194 taaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  20771013 taaccccctcaaattggcacctgagagaatcgaacttgagacct 20770970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 16581798 - 16581752
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  16581798 aactaaccctctcaaattggcaccagagataatagaacctgagacct 16581752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 19680759 - 19680805
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  19680759 aactaacctccttaaattggcaccagagagaatcgaacctaagacct 19680805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 33632107 - 33632153
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||    
T  33632107 aactaaccccctcaaattgacaccagagagaatcgatcctgggacct 33632153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 44194955 - 44195001
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  44194955 aactaactccctcaaattggcaccagagagaattgaacatgagacct 44195001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 9517754 - 9517787
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  9517754 aaattggcaccagagagaatcgaacctgagacct 9517787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 34844871 - 34844904
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  34844871 aaattggcaccagagagaatcgaacctgagacct 34844904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 40058965 - 40058998
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  40058965 aaattggcaccagagagaatcgaacctgagacct 40058998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 49287942 - 49287909
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  49287942 aaattggcaccagagagaatcgaacctgagacct 49287909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 4923661 - 4923609
Alignment:
Q  185 taaactaactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||| |||||| ||||||||||||| ||||||||| ||| |||||||||    
T  4923661 taaactaattaaccctctcaaattggcacaagagagaattgaatctgagacct 4923609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 5609315 - 5609347
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacc 236  Q
    |||||||||||||||||||||||||||||||||    
T  5609315 aaattggcaccagagagaatcgaacctgagacc 5609347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Original strand, 2622379 - 2622410
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagac 235  Q
    ||||||||||||||||||||||||||||||||    
T  2622379 aaattggcaccagagagaatcgaacctgagac 2622410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 10048083 - 10048040
Alignment:
Q  193 ctaaccccctcaaattggcaccagagagaatcgaacctgagacc 236  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||    
T  10048083 ctaaccccttcaaattagcatcagagagaatcgaacctgagacc 10048040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 28635789 - 28635755
Alignment:
Q  203 caaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||| ||||||    
T  28635789 caaattggcaccagagagaatcgaacctaagacct 28635755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 51622578 - 51622544
Alignment:
Q  203 caaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||| |||||||||||||||    
T  51622578 caaattggcaccagagagagtcgaacctgagacct 51622544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 2351097 - 2351064
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  2351097 aaattggcaccagagggaatcgaacctgagacct 2351064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 7949438 - 7949471
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||| |||||||||||||||||||||||||||    
T  7949438 aaattgacaccagagagaatcgaacctgagacct 7949471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 13873408 - 13873441
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  13873408 aaattggcaccagagggaatcgaacctgagacct 13873441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 22630299 - 22630332
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  22630299 aaattggcaccagagggaatcgaacctgagacct 22630332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 25852298 - 25852265
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  25852298 aaattggcaccagagggaatcgaacctgagacct 25852265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 27528908 - 27528941
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  27528908 aaattggcaccagagggaatcgaacctgagacct 27528941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 33992710 - 33992677
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||| ||||||    
T  33992710 aaattggcaccagagagaatcgaacctaagacct 33992677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 51535697 - 51535664
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  51535697 aaattggcaccagagggaatcgaacctgagacct 51535664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 52983703 - 52983670
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  52983703 aaattggcaccagagggaatcgaacctgagacct 52983670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 1730460 - 1730504
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagac 235  Q
    |||||| ||||||||||| |||||||||||||| ||| |||||||    
T  1730460 aactaatcccctcaaattagcaccagagagaatagaatctgagac 1730504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 2732087 - 2732055
Alignment:
Q  203 caaattggcaccagagagaatcgaacctgagac 235  Q
    |||||||||||| ||||||||||||||||||||    
T  2732087 caaattggcaccggagagaatcgaacctgagac 2732055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 2799967 - 2799921
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2799967 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 2799921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 8177153 - 8177199
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  8177153 aactaaccccctcaaattggcaccagagagaatcgaacctgaaacct 8177199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 8904519 - 8904473
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  8904519 aactaaccccctcaaattggcaccagagagaatcgaacttgagacct 8904473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 33700744 - 33700790
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  33700744 aactaacccccttaaattggcaccagagagaatcgaacctgagacct 33700790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 40810572 - 40810526
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  40810572 aactaaccctctcaaattggcaccagagagaatcgaacctgagacct 40810526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 32524436 - 32524393
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgaga 234  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  32524436 aactaaccccctcaaattggcaccagagagaatcgaacttgaga 32524393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 229
Target Start/End: Original strand, 3679285 - 3679323
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacc 229  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3679285 aactaaccccctcaaattggcaccagagagaatcgaacc 3679323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 29753754 - 29753708
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||    
T  29753754 aactaaccctcttaaattggcaccagagagaatcgaacctgagacct 29753708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 36371575 - 36371529
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  36371575 aactaaccccctcaaattggcatcagagagaatcgaacctcagacct 36371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 9165169 - 9165210
Alignment:
Q  194 taaccccctcaaattggcaccagagagaatcgaacctgagac 235  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  9165169 taaccccctcaaattggcaccagagagaattgaacctgagac 9165210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 1247215 - 1247172
Alignment:
Q  194 taaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  1247215 taaccccttcaaattggtaccagagagaatcgaacctgagacct 1247172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 11063661 - 11063615
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||    
T  11063661 aactaaccccttcaaattggcactagagagaatcgaacctaagacct 11063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 50920059 - 50920013
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||    
T  50920059 aactaaccccttcaaattgacaccagagagaatcgaacctgaaacct 50920013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 8077731 - 8077698
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  8077731 aaattggcaccagagagaatcgaacctgagacct 8077698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 9500468 - 9500501
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  9500468 aaattggcaccagagagaatcgaacctgagacct 9500501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 15059515 - 15059548
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  15059515 aaattggcaccagagagaatcgaacctgagacct 15059548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 18646937 - 18646904
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  18646937 aaattggcaccagagagaatcgaacctgagacct 18646904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 3266019 - 3265983
Alignment:
Q  201 ctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3266019 ctcaaattggaaccagagagaatcgaacctgagacct 3265983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 15786298 - 15786337
Alignment:
Q  198 cccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  15786298 cccctcaaattgacaccaaagagaatcgaacctgagacct 15786337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 42858619 - 42858653
Alignment:
Q  202 tcaaattggcaccagagagaatcgaacctgagacc 236  Q
    |||||||| ||||||||||||||||||||||||||    
T  42858619 tcaaattgacaccagagagaatcgaacctgagacc 42858653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 51814587 - 51814553
Alignment:
Q  203 caaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||| ||||||||||||||||||||||    
T  51814587 caaattggcaccggagagaatcgaacctgagacct 51814553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 168285 - 168252
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  168285 aaattggcaccagagggaatcgaacctgagacct 168252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 4621350 - 4621383
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  4621350 aaattggcaccagagggaatcgaacctgagacct 4621383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 24122107 - 24122074
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  24122107 aaattggcaccagagggaatcgaacctgagacct 24122074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 24674477 - 24674444
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  24674477 aaattggcaccagagggaatcgaacctgagacct 24674444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 33981134 - 33981175
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctga 232  Q
    |||||||||||||||||  ||| |||||||||||||||||||    
T  33981134 aactaaccccctcaaatgagcatcagagagaatcgaacctga 33981175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 45859156 - 45859189
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  45859156 aaattggcaccagagggaatcgaacctgagacct 45859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 46607894 - 46607861
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  46607894 aaattggcaccagagggaatcgaacctgagacct 46607861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 26459381 - 26459427
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26459381 aactaaccccttcaaattggcaccagagagaatcgaacctgagacct 26459427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 39631949 - 39631903
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  39631949 aactaaccccctcaaattggcacaagagagaatcgaacctgagacct 39631903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 29785272 - 29785318
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  29785272 aactaaccccctcaaattggcaccagaaagaatcgaacatgagacct 29785318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 33222475 - 33222429
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  33222475 aactaaccctctcaaattgacaccagagagaatcgaacctgagacct 33222429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 37162321 - 37162367
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  37162321 aactaatcccctcaaattggcaccagagagaatcgaacttgagacct 37162367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 43215289 - 43215243
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  43215289 aactaaccccctcaaattggcataagagagaatcgaacctgagacct 43215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 33869418 - 33869462
Alignment:
Q  193 ctaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  33869418 ctaaccccctcaaattgacaccagagagaatcgaaccagagacct 33869462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 7744083 - 7744129
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  7744083 aactgaccccctcaaatttgcaccagagagaatcaaacctgagacct 7744129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 17113900 - 17113854
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  17113900 aactaaccccctcaaattagcatcagagagaatcgaacttgagacct 17113854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 21570003 - 21570049
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  21570003 aactaaccccctcaaattgacaccagagaaaatcgaacttgagacct 21570049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 25655203 - 25655245
Alignment:
Q  195 aaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  25655203 aaccccttcaaattggcaccagagagaatcgaacctgaaacct 25655245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 21558220 - 21558187
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  21558220 aaattggcaccagagagaatcgaacctgagacct 21558187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 41907626 - 41907659
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||    
T  41907626 aaattggcaccagagagaatcgaacctgagacct 41907659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 2962564 - 2962521
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgaga 234  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||    
T  2962564 aactaactccctcaaattggttccagagagaatcgaacctgaga 2962521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 7799935 - 7799978
Alignment:
Q  194 taaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||| || ||||||||||||||| ||||||||||||||||||    
T  7799935 taacccactgaaattggcaccagagggaatcgaacctgagacct 7799978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 654817 - 654850
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  654817 aaattggcaccagagggaatcgaacctgagacct 654850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 2751359 - 2751326
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  2751359 aaattggcaccagagggaatcgaacctgagacct 2751326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 4566412 - 4566445
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||| ||||||||||||    
T  4566412 aaattggcaccagagagaatcaaacctgagacct 4566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 7175975 - 7176008
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  7175975 aaattggcaccagagggaatcgaacctgagacct 7176008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 7275365 - 7275332
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  7275365 aaattggcaccagagggaatcgaacctgagacct 7275332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 11997937 - 11997904
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  11997937 aaattggcaccagagggaatcgaacctgagacct 11997904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 17212141 - 17212108
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||| |||||||||||||    
T  17212141 aaattggcaccagagagaattgaacctgagacct 17212108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 22119976 - 22119943
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  22119976 aaattggcaccagagggaatcgaacctgagacct 22119943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 28647057 - 28647024
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  28647057 aaattggcaccagagggaatcgaacctgagacct 28647024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 29861758 - 29861725
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  29861758 aaattggcaccagagggaatcgaacctgagacct 29861725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 30579427 - 30579394
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||| |||||||||||||||||    
T  30579427 aaattggcaccagagaaaatcgaacctgagacct 30579394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 40543023 - 40543056
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  40543023 aaattggcaccagagggaatcgaacctgagacct 40543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 11700259 - 11700224
Alignment:
Q  201 ctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11700259 ctcaaattggcac-agagagaatcgaacctgagacct 11700224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 13106763 - 13106799
Alignment:
Q  201 ctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  13106763 ctcaaattagcatcagagagaatcgaacctgagacct 13106799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 18363810 - 18363755
Alignment:
Q  177 gaagaagctaaactaactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||     |||||||||||| || |||||||||| ||||||||||||    
T  18363810 gaagaagctaaactaac-----ccctcaaattggtactagagagaatcaaacctgagacct 18363755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 21570082 - 21570118
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaa 227  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  21570082 aactaaccccctcaaattgacaccagagaaaatcgaa 21570118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 10969888 - 10969934
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  10969888 aactaacccccttaaattggcaccagagagaatcgaacctgagacct 10969934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 15048032 - 15048078
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  15048032 aactaaccccctcaaattggcaccagagataatcgaacctgagacct 15048078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 28703375 - 28703421
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  28703375 aactaacctcctcaaattggcaccagagagaatcgaacctgagacct 28703421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 30311411 - 30311365
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  30311411 aactaaccccctcaaattggcaccaaagagaatcgaacctgagacct 30311365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 53413050 - 53413004
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  53413050 aactaaccccctcaaattggcaccagagagaattgaacctgagacct 53413004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 37788443 - 37788482
Alignment:
Q  198 cccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  37788443 cccctcaaattggcactagagagaatcgaacctgagacct 37788482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 34062519 - 34062565
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||    
T  34062519 aactaacatcctcaaattggcaccagagagaattgaacctgagacct 34062565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 40063735 - 40063678
Alignment:
Q  177 gaagaagctaaactaactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||   ||||||||||||||||||  ||||||||||||| ||||||||    
T  40063735 gaagaagctaaactaa---accccctcaaattggcactggagagaatcgaacttgagacct 40063678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 46518733 - 46518687
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  46518733 aactaaccccctcaaattggcatcagagagaatcaaacctgaaacct 46518687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 10445120 - 10445156
Alignment:
Q  201 ctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||| ||||||||||||||||||||||||||||    
T  10445120 ctcaaattagcaccagagagaatcgaacctgagacct 10445156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 10828706 - 10828750
Alignment:
Q  193 ctaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||| || ||| |||||||||||||||||    
T  10828706 ctaaccccctcaaattggcatcatagataatcgaacctgagacct 10828750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Complemental strand, 7975530 - 7975499
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaa 222  Q
    ||||||||||||||||||||||||||||||||    
T  7975530 aactaaccccctcaaattggcaccagagagaa 7975499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 20501794 - 20501755
Alignment:
Q  198 cccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  20501794 cccctcaaattggcactggagagaatcgaacctgagacct 20501755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 27093343 - 27093378
Alignment:
Q  202 tcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||| ||||||||||||    
T  27093343 tcaaattggcaccagagagaatcaaacctgagacct 27093378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Original strand, 53234023 - 53234054
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagac 235  Q
    ||||||||||||||||||||||||||||||||    
T  53234023 aaattggcaccagagagaatcgaacctgagac 53234054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 16354870 - 16354908
Alignment:
Q  198 cccctcaaattggcaccagagagaatcgaacctgagacc 236  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  16354870 ccccttaatttggcaccagagagaatcgaacctgagacc 16354908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 27259266 - 27259220
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||| || ||||||||||| ||||||| ||||    
T  27259266 aactaaccccctcaaattgacatcagagagaatcaaacctgaaacct 27259220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 46553036 - 46552990
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| | ||||||||||| ||||||||||||| |||||||||    
T  46553036 aactaacccacccaaattggcactagagagaatcgaatctgagacct 46552990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 2511410 - 2511443
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  2511410 aaattggcaccagagggaatcgaacctgagacct 2511443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 8456263 - 8456296
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  8456263 aaattggcaccagagggaatcgaacctgagacct 8456296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 26108376 - 26108343
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  26108376 aaattggcaccagagggaatcgaacctgagacct 26108343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 30807266 - 30807299
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  30807266 aaattggcaccagagggaatcgaacctgagacct 30807299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 35492995 - 35492962
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  35492995 aaattggcaccagagggaatcgaacctgagacct 35492962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 39041965 - 39041998
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||| ||||||||    
T  39041965 aaattggcaccagagagaatcgaacttgagacct 39041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 40940909 - 40940876
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  40940909 aaattggcaccagagggaatcgaacctgagacct 40940876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 46576432 - 46576399
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  46576432 aaattggcaccagagggaatcgaacctgagacct 46576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 52455762 - 52455795
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  52455762 aaattggcaccagagggaatcgaacctgagacct 52455795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 52821748 - 52821781
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  52821748 aaattggcaccagagggaatcgaacctgagacct 52821781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 3427534 - 3427570
Alignment:
Q  201 ctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  3427534 ctcaaattggcactagagagaatcgaatctgagacct 3427570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 34622522 - 34622558
Alignment:
Q  201 ctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  34622522 ctcaaattgacaccagagaaaatcgaacctgagacct 34622558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 37051265 - 37051309
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagac 235  Q
    ||||||||||||||||| ||  | |||||||||||||||||||||    
T  37051265 aactaaccccctcaaatcggtgcaagagagaatcgaacctgagac 37051309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 51222215 - 51222183
Alignment:
Q  203 caaattggcaccagagagaatcgaacctgagac 235  Q
    ||||||||||| |||||||||||||||||||||    
T  51222215 caaattggcacgagagagaatcgaacctgagac 51222183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 40416361 - 40416407
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  40416361 aactaaccccttcaaattggcaccagagagaatcgaacctgagacct 40416407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 42922520 - 42922474
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  42922520 aactaaccccatcaaattggcaccagagagaatcgaacctgagacct 42922474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 4060185 - 4060228
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgaga 234  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4060185 aactaaccccctcaaattgacaccagagagaatcgaacctgaga 4060228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 2750597 - 2750643
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  2750597 aactaaccccctcaaattggcactagagagaatcgaacatgagacct 2750643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 13803600 - 13803554
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  13803600 aactaaccccctcaaattggcatcagagataatcgaacctgagacct 13803554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 14500382 - 14500336
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14500382 aactatccccctcaaattggcaccagagagaatcgaatctgagacct 14500336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 34041559 - 34041605
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  34041559 aactaaccccctcaaattggcaccagagggaatcaaacctgagacct 34041605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 45026848 - 45026802
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  45026848 aactaaccccctcaaattggcaccagagagaatcaaacatgagacct 45026802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 19244204 - 19244168
Alignment:
Q  201 ctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  19244204 ctcaaattggcaccagagagaatcgaacctgagacct 19244168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 21303968 - 21304011
Alignment:
Q  194 taaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  21303968 taaccccctcaaattgacaccagagagaatcgaacctgaaacct 21304011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 30410520 - 30410562
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgag 233  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  30410520 aactaaccccctcaaattggcaccagagaaaatcgaacatgag 30410562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 19322873 - 19322827
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||| |||||||||||||| |||||||||| |||| |||||||    
T  19322873 aactaacctcctcaaattggcactagagagaatcaaaccagagacct 19322827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 10582103 - 10582136
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  10582103 aaattggcaccagagggaatcgaacctgagacct 10582136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 17324850 - 17324817
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  17324850 aaattggcaccagagggaatcgaacctgagacct 17324817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 25293250 - 25293217
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  25293250 aaattggcaccagagggaatcgaacctgagacct 25293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 28194246 - 28194279
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||| ||||||    
T  28194246 aaattggcaccagagagaatcgaacctaagacct 28194279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 30466943 - 30466976
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||| ||||||||||||||||||||||||    
T  30466943 aaattggcagcagagagaatcgaacctgagacct 30466976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 33569842 - 33569875
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  33569842 aaattagcaccagagagaatcgaacctgagacct 33569875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 33827686 - 33827719
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  33827686 aaattggcaccagagggaatcgaacctgagacct 33827719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 43374438 - 43374471
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  43374438 aaattggcaccagagggaatcgaacctgagacct 43374471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 44976267 - 44976300
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  44976267 aaattggcaccagagggaatcgaacctgagacct 44976300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 9318060 - 9318092
Alignment:
Q  205 aattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||| ||||||||||||||||||||||||    
T  9318060 aattggcatcagagagaatcgaacctgagacct 9318092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 11062474 - 11062419
Alignment:
Q  177 gaagaagctaaactaactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||     |||||||||| ||| |||||||||| ||||||||||||    
T  11062474 gaagaagctaaactaact-----cctcaaattgacacaagagagaatcaaacctgagacct 11062419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 18540400 - 18540357
Alignment:
Q  194 taaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  18540400 taaccctctcaaattggcaccagagagaatcgaacctgagacct 18540357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 33017312 - 33017273
Alignment:
Q  198 cccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33017312 cccctcaaattggcaccagagagaatcgaacctgagacct 33017273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 12988542 - 12988487
Alignment:
Q  177 gaagaagctaaactaactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||     |||||||||||||||||||||| ||||||||||| ||||    
T  12988542 gaagaagctaaactaac-----ccctcaaattggcaccagagaggatcgaacctgaaacct 12988487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 29956367 - 29956399
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaat 223  Q
    |||||||||||||||||||||||||||||||||    
T  29956367 aactaaccccctcaaattggcaccagagagaat 29956399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 3174788 - 3174822
Alignment:
Q  203 caaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||| |||||||||||||||||||||||||||    
T  3174788 caaattgacaccagagagaatcgaacctgagacct 3174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 6569742 - 6569788
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||| ||||| |||||||||||| ||| ||||    
T  6569742 aactaaccccctcaaattgacaccaaagagaatcgaacatgaaacct 6569788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 8794323 - 8794361
Alignment:
Q  198 cccctcaaattggcaccagagagaatcgaacctgagacc 236  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  8794323 ccccttaaattggtaccagagagaatcgaacctgagacc 8794361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 13129761 - 13129727
Alignment:
Q  203 caaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||||||||| ||||    
T  13129761 caaattggcaccagagagaatcgaacctgaaacct 13129727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 42740599 - 42740553
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||| |||| |||||| ||||||||||||| |||||||||||||    
T  42740599 aactaactcccttaaattgacaccagagagaattgaacctgagacct 42740553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 3734736 - 3734769
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  3734736 aaattggcaccagagggaatcgaacctgagacct 3734769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 4718733 - 4718700
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  4718733 aaattggcaccagagggaatcgaacctgagacct 4718700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 6536612 - 6536579
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||| |||||||||||||    
T  6536612 aaattggcaccagagagaattgaacctgagacct 6536579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 6953120 - 6953153
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  6953120 aaattggcaccagagggaatcgaacctgagacct 6953153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 14633042 - 14633009
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  14633042 aaattggcaccagagggaatcgaacctgagacct 14633009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 15259519 - 15259552
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  15259519 aaattggcaccagagggaatcgaacctgagacct 15259552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 28193562 - 28193529
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  28193562 aaattggcaccagagggaatcgaacctgagacct 28193529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 32879367 - 32879334
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  32879367 aaattggcaccagagggaatcgaacctgagacct 32879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 34237768 - 34237801
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  34237768 aaattggcaccagagggaatcgaacctgagacct 34237801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 35690048 - 35690081
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||| |||||||||||||||||||||||||||    
T  35690048 aaattgacaccagagagaatcgaacctgagacct 35690081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 39349344 - 39349311
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  39349344 aaattggcaccagagggaatcgaacctgagacct 39349311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 16317715 - 16317671
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagac 235  Q
    ||||| ||| || ||||||||||||||||||||||||| ||||||    
T  16317715 aactagcccactgaaattggcaccagagagaatcgaacatgagac 16317671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 38898535 - 38898492
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||   || ||||||||||||||||||    
T  38898535 aactaaccccctcaaattggcac---agggaatcgaacctgagacct 38898492  T

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Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 2693 - 2728
Alignment:
Q  202 tcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  2693 tcaaattggcaccagagagaatcgaacctgagacct 2728  T

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Target: scaffold0180 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 19940 - 19979
Alignment:
Q  198 cccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  19940 cccctcaaattaacaccagagagaatcgaacctgagacct 19979  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 81535 - 81581
Alignment:
Q  191 aactaaccccctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||| |||||||||||||| ||| |||||||||| |||||||||    
T  81535 aactaactccctcaaattggcatcagggagaatcgaatctgagacct 81581  T

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Target: scaffold0576 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 5195 - 5228
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  5195 aaattggcaccagagggaatcgaacctgagacct 5228  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 8520 - 8553
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||| |||||||||||||||||    
T  8520 aaattggcaccagagataatcgaacctgagacct 8553  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 40409 - 40376
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  40409 aaattggcaccagagggaatcgaacctgagacct 40376  T

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Target: scaffold0070; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 42498 - 42535
Alignment:
Q  198 cccctcaaattggcaccagagagaatcgaacctgagac 235  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  42498 ccccttaaattggcaccaaagagaatcgaacctgagac 42535  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 97479 - 97512
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  97479 aaattggcaccagagggaatcgaacctgagacct 97512  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 161893 - 161860
Alignment:
Q  204 aaattggcaccagagagaatcgaacctgagacct 237  Q
    ||||||||||||||| ||||||||||||||||||    
T  161893 aaattggcaccagagggaatcgaacctgagacct 161860  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 18394 - 18358
Alignment:
Q  201 ctcaaattggcaccagagagaatcgaacctgagacct 237  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  18394 ctcaaattggcaccagagagaatcaaacctgaaacct 18358  T

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