View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15672_low_56 (Length: 234)
Name: NF15672_low_56
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15672_low_56 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 39912431 - 39912631
Alignment:
| Q |
16 |
tgaatagagccaaagtagtgaatgtgcgtgatgaaaaacacttagaatttgaagaaagtgggttgaatgaaacatcagaaaacctaggccttaatctttg |
115 |
Q |
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| T |
39912431 |
tgaatagagccaaagtagtgaatgtgcgtgatgaaaaacacttagaatttgaaggaagtgggttgaatgaaacatcagaaaacctaggccttaatctttg |
39912530 |
T |
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| Q |
116 |
acactgtaattgaagcaaagggtctttcttcaaatccacggaataagtactagagacactagacatgagtaacatagtttgagccattgctatactatgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39912531 |
acactgtaattgaagcaaagggtctttcttcaaatccacggaataagtactagagacactagacatgagtaacatagtttgagccattgctatactatgt |
39912630 |
T |
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| Q |
216 |
t |
216 |
Q |
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| T |
39912631 |
t |
39912631 |
T |
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