View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15672_low_57 (Length: 225)
Name: NF15672_low_57
Description: NF15672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15672_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 25175944 - 25176152
Alignment:
| Q |
1 |
ttgagttcacaatcaccctatgttccacactcttgtatattgcattgctcagcacctaaaacatataatcatcacataaaatatttattaattaccatca |
100 |
Q |
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| T |
25175944 |
ttgagttcacaatcaccctatgttccacactcttgtatattgcattgctcagcacctaaaac--ataaacatcatataaaatatttattaattaccatca |
25176041 |
T |
|
| Q |
101 |
accactaattgttgaaatc----ttaacatcacaataatattaatttgactnnnnnnnnnnngaatagtcattgtgcaccattttaaaatggtgtatatt |
196 |
Q |
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|||||||||||||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || |
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| T |
25176042 |
accactaattgttgaactcttagttaacatcacaataatattaatttgactaaaaaaac----aatagtcattttgcaccattttaaaatggtgtatgtt |
25176137 |
T |
|
| Q |
197 |
gcaatcattttattg |
211 |
Q |
| |
|
||||||||||||||| |
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|
| T |
25176138 |
gcaatcattttattg |
25176152 |
T |
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