View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15673_high_21 (Length: 355)
Name: NF15673_high_21
Description: NF15673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15673_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 30 - 337
Target Start/End: Original strand, 35950515 - 35950821
Alignment:
| Q |
30 |
aatctaaaaggtgtaaaaacacgctaaaagaccctccaacgcccaacaacatttcggataccacaatcaactctttaacgataccacaattttttgagat |
129 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35950515 |
aatctaaaaggtgtaaaaacacgctaaaagaccctccaacacccaacaacatttcggataccacaatcaactctttaacgataccacaattttttaagat |
35950614 |
T |
|
| Q |
130 |
cgcaaaaaatacatgctcaacatgagtgtaaacaaaatctacatcaaagtacatgataaagatgtctccgaaggttccttctccggctaatatgcaacta |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35950615 |
cgcaaaaaatacatgctcaacatgagtgtaaacaaaatctacatcaaagtacatgataaagatgtctccgaaggttccttctccggctaatatgcaacta |
35950714 |
T |
|
| Q |
230 |
tatgacgcactttccatttaataattcattgtgacgtatgcatgataacaagaccattcaatttcaacatctaagtattaacatatgctttcctttcgtg |
329 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35950715 |
tatgacgcac-ttccatttaataattcattgtgacgtatgcatgataacaagaccattcaatttcaacatctaagtattaacatatgctttcctttcgtg |
35950813 |
T |
|
| Q |
330 |
gaaaatac |
337 |
Q |
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|||||||| |
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| T |
35950814 |
gaaaatac |
35950821 |
T |
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