View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15673_high_34 (Length: 226)
Name: NF15673_high_34
Description: NF15673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15673_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 10103642 - 10103782
Alignment:
| Q |
70 |
tcttaaacttaacataagtttaatgttttatattagataatggagatacgcccaaatgtaaactggaataaaggtgatgctctaatgtattttcttgaca |
169 |
Q |
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| T |
10103642 |
tcttaaacttaacataagttgaatgttttatattagattatggagatacgcccaaatgtgaactggaataaaggcgatgctctaatgtattttcttgaca |
10103741 |
T |
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| Q |
170 |
ctcttggatataacacctttgatgatgttctaccaatatac |
210 |
Q |
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| T |
10103742 |
ctcttggatataacacctttgatgatgttctaccaatatac |
10103782 |
T |
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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 10103515 - 10103559
Alignment:
| Q |
26 |
tgacagagaaaatgaaatatctctcttatttatctgtctttaaat |
70 |
Q |
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| T |
10103515 |
tgacggagaaaatgaaatctctttcttatttatcagtctttaaat |
10103559 |
T |
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