View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15673_high_41 (Length: 202)
Name: NF15673_high_41
Description: NF15673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15673_high_41 |
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Alignment Details
Target: chr4 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 52768119 - 52767952
Alignment:
| Q |
19 |
agatgcttggtgaggtaaccccttaattcaaaatttcaacttgcaagatgatgaagagctcaatgcaaattcaacggctagcgaatttattcaaaattac |
118 |
Q |
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| T |
52768119 |
agatgcttggtgaggtaaccccttaattcaaaatttcaacttgcaagatgatgaagagctcaatgcaaattcaacggttagcgaatttattcaaaattac |
52768020 |
T |
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| Q |
119 |
cattggaatatgccagccgatttgtgcgaaaatcttccagtcctgaggcaacttgtggtgcaagttat |
186 |
Q |
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||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
52768019 |
cattggaatatgccagccggtttgtgcgaaaatcttccggtcctgaggcaacttgtggtgcaagttat |
52767952 |
T |
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