View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15673_low_1 (Length: 802)

Name: NF15673_low_1
Description: NF15673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15673_low_1
NF15673_low_1
[»] chr4 (38 HSPs)
chr4 (511-787)||(26503516-26503792)
chr4 (69-310)||(15496131-15496371)
chr4 (66-310)||(52575621-52575864)
chr4 (182-304)||(19839862-19839984)
chr4 (66-313)||(17781381-17781643)
chr4 (117-262)||(24177904-24178049)
chr4 (118-258)||(17261395-17261536)
chr4 (17-68)||(15496468-15496519)
chr4 (17-67)||(52575937-52575987)
chr4 (66-110)||(19839729-19839773)
chr4 (208-262)||(29508851-29508905)
chr4 (13-66)||(24177798-24177851)
chr4 (207-259)||(4094908-4094960)
chr4 (273-316)||(15496887-15496930)
chr4 (207-262)||(25474862-25474917)
chr4 (191-262)||(39797480-39797551)
chr4 (207-315)||(45742742-45742848)
chr4 (208-262)||(28501323-28501377)
chr4 (191-257)||(32684648-32684714)
chr4 (202-262)||(19282012-19282072)
chr4 (207-262)||(2615881-2615936)
chr4 (191-262)||(6629393-6629464)
chr4 (191-262)||(13498406-13498477)
chr4 (191-262)||(17467937-17468008)
chr4 (369-428)||(26503340-26503399)
chr4 (191-242)||(26889819-26889870)
chr4 (191-262)||(30745719-30745790)
chr4 (191-262)||(30868720-30868791)
chr4 (207-262)||(34273155-34273210)
chr4 (207-262)||(37352589-37352644)
chr4 (207-262)||(37357488-37357543)
chr4 (191-242)||(47109740-47109791)
chr4 (207-262)||(50424790-50424845)
chr4 (207-262)||(51335839-51335894)
chr4 (191-262)||(52181104-52181175)
chr4 (207-262)||(53277122-53277177)
chr4 (209-262)||(6595671-6595724)
chr4 (274-311)||(52576334-52576371)
[»] chr5 (24 HSPs)
chr5 (17-310)||(9977981-9978275)
chr5 (182-261)||(10620766-10620845)
chr5 (191-262)||(21069683-21069754)
chr5 (277-313)||(9978622-9978658)
chr5 (191-262)||(16285110-16285181)
chr5 (208-262)||(39971060-39971114)
chr5 (207-262)||(4985052-4985107)
chr5 (207-262)||(6673164-6673219)
chr5 (191-262)||(13660907-13660978)
chr5 (207-262)||(17674594-17674649)
chr5 (191-262)||(20186547-20186618)
chr5 (207-262)||(20988149-20988204)
chr5 (191-262)||(24857602-24857673)
chr5 (207-262)||(26605559-26605614)
chr5 (207-262)||(31158360-31158415)
chr5 (191-262)||(31642233-31642304)
chr5 (191-262)||(31657730-31657801)
chr5 (191-262)||(35547307-35547378)
chr5 (191-262)||(35784837-35784908)
chr5 (191-258)||(37206169-37206236)
chr5 (207-262)||(43060347-43060402)
chr5 (209-262)||(15559579-15559632)
chr5 (278-311)||(26889592-26889625)
chr5 (277-310)||(34258679-34258712)
[»] chr3 (38 HSPs)
chr3 (17-310)||(10284395-10284691)
chr3 (17-319)||(9794581-9794886)
chr3 (88-262)||(1330822-1330998)
chr3 (66-258)||(38670068-38670276)
chr3 (182-311)||(16869488-16869616)
chr3 (190-310)||(48921669-48921787)
chr3 (17-68)||(1328049-1328100)
chr3 (274-311)||(10284003-10284040)
chr3 (209-262)||(52693626-52693679)
chr3 (191-262)||(12918758-12918829)
chr3 (191-262)||(15095244-15095315)
chr3 (191-258)||(27646226-27646293)
chr3 (207-262)||(30040953-30041008)
chr3 (191-262)||(30819924-30819995)
chr3 (207-262)||(39952317-39952372)
chr3 (274-310)||(9795236-9795272)
chr3 (274-310)||(38670793-38670829)
chr3 (191-258)||(1111568-1111635)
chr3 (207-262)||(7051656-7051711)
chr3 (191-262)||(7181396-7181467)
chr3 (191-262)||(8379723-8379794)
chr3 (207-262)||(17753471-17753526)
chr3 (207-262)||(19054791-19054846)
chr3 (207-262)||(20877679-20877734)
chr3 (207-262)||(26221334-26221389)
chr3 (207-262)||(26593701-26593756)
chr3 (191-262)||(42526545-42526616)
chr3 (207-262)||(45252819-45252874)
chr3 (207-262)||(46861666-46861721)
chr3 (191-262)||(47008422-47008493)
chr3 (207-262)||(47066980-47067035)
chr3 (191-262)||(48904183-48904254)
chr3 (208-262)||(17589813-17589867)
chr3 (208-262)||(48902645-48902699)
chr3 (209-262)||(26058592-26058645)
chr3 (278-311)||(32978745-32978778)
chr3 (191-260)||(44561616-44561685)
chr3 (506-547)||(54638406-54638447)
[»] chr7 (31 HSPs)
chr7 (66-262)||(24282077-24282278)
chr7 (88-262)||(42538562-42538738)
chr7 (17-68)||(42541455-42541506)
chr7 (19-68)||(25594274-25594323)
chr7 (207-262)||(26255141-26255196)
chr7 (191-262)||(27813546-27813617)
chr7 (191-262)||(30534751-30534822)
chr7 (191-262)||(32699624-32699695)
chr7 (191-242)||(34693466-34693517)
chr7 (208-262)||(44510280-44510334)
chr7 (208-262)||(49045057-49045111)
chr7 (182-243)||(25594072-25594133)
chr7 (207-262)||(6387371-6387426)
chr7 (207-262)||(7449315-7449370)
chr7 (207-262)||(8290949-8291004)
chr7 (191-262)||(9299143-9299214)
chr7 (207-262)||(9998333-9998388)
chr7 (207-262)||(18113103-18113158)
chr7 (207-262)||(21295197-21295252)
chr7 (207-262)||(29285973-29286028)
chr7 (207-262)||(30895606-30895661)
chr7 (207-262)||(34012454-34012509)
chr7 (191-262)||(35888358-35888429)
chr7 (207-262)||(39197764-39197819)
chr7 (207-262)||(40300276-40300331)
chr7 (207-262)||(41026032-41026087)
chr7 (207-262)||(47657600-47657655)
chr7 (192-242)||(19497307-19497357)
chr7 (191-261)||(24504731-24504801)
chr7 (274-311)||(24282728-24282764)
chr7 (208-261)||(45722054-45722107)
[»] chr6 (20 HSPs)
chr6 (96-310)||(4745951-4746168)
chr6 (193-258)||(5575425-5575490)
chr6 (191-262)||(22710312-22710383)
chr6 (190-242)||(5139995-5140047)
chr6 (191-262)||(6418572-6418643)
chr6 (190-243)||(180634-180687)
chr6 (191-261)||(25197199-25197269)
chr6 (190-262)||(2614120-2614192)
chr6 (207-262)||(1147203-1147258)
chr6 (207-262)||(1730038-1730093)
chr6 (207-262)||(6147429-6147484)
chr6 (207-262)||(8743233-8743288)
chr6 (207-262)||(11656282-11656337)
chr6 (207-262)||(11847617-11847672)
chr6 (207-258)||(18106107-18106158)
chr6 (208-262)||(231044-231097)
chr6 (208-262)||(8217656-8217710)
chr6 (191-261)||(23398059-23398129)
chr6 (274-311)||(4745063-4745100)
chr6 (278-311)||(13647867-13647900)
[»] chr8 (20 HSPs)
chr8 (17-117)||(10636698-10636798)
chr8 (274-311)||(10637146-10637183)
chr8 (191-262)||(5109927-5109998)
chr8 (191-262)||(17336464-17336535)
chr8 (191-262)||(19176182-19176253)
chr8 (207-262)||(45425081-45425136)
chr8 (208-262)||(35179646-35179700)
chr8 (278-320)||(39029441-39029483)
chr8 (209-262)||(13141506-13141559)
chr8 (208-261)||(36408462-36408515)
chr8 (277-312)||(2944011-2944046)
chr8 (207-262)||(5951164-5951219)
chr8 (207-262)||(11483056-11483111)
chr8 (207-262)||(13153974-13154029)
chr8 (207-262)||(14699498-14699553)
chr8 (207-262)||(29598270-29598325)
chr8 (207-262)||(36177039-36177094)
chr8 (191-262)||(36941315-36941386)
chr8 (191-262)||(37023203-37023274)
chr8 (278-312)||(26016833-26016867)
[»] chr2 (22 HSPs)
chr2 (191-258)||(7016131-7016198)
chr2 (13-68)||(42238519-42238574)
chr2 (191-260)||(13215739-13215808)
chr2 (214-262)||(43700663-43700711)
chr2 (191-262)||(9701116-9701187)
chr2 (207-262)||(12360502-12360557)
chr2 (207-262)||(16669672-16669727)
chr2 (207-262)||(36130964-36131019)
chr2 (191-262)||(40607748-40607819)
chr2 (208-262)||(36750821-36750875)
chr2 (18-68)||(7016520-7016571)
chr2 (191-262)||(8990250-8990321)
chr2 (207-262)||(29239529-29239584)
chr2 (207-262)||(32120990-32121045)
chr2 (207-262)||(32511065-32511120)
chr2 (191-262)||(40680773-40680844)
chr2 (191-262)||(41422558-41422629)
chr2 (191-262)||(41494542-41494613)
chr2 (209-259)||(27725631-27725681)
chr2 (208-262)||(34432137-34432191)
chr2 (208-262)||(40544370-40544424)
chr2 (278-311)||(15227889-15227922)
[»] chr1 (23 HSPs)
chr1 (17-68)||(17649248-17649299)
chr1 (208-262)||(15302681-15302735)
chr1 (182-258)||(50225329-50225405)
chr1 (191-262)||(29437774-29437845)
chr1 (191-262)||(39627156-39627227)
chr1 (208-262)||(49549047-49549101)
chr1 (28-68)||(50225012-50225052)
chr1 (207-262)||(1767798-1767853)
chr1 (207-262)||(4102650-4102705)
chr1 (207-262)||(11907164-11907219)
chr1 (191-262)||(21290167-21290238)
chr1 (191-262)||(23542025-23542096)
chr1 (207-262)||(27037315-27037370)
chr1 (207-262)||(27530538-27530593)
chr1 (207-262)||(28052235-28052290)
chr1 (207-262)||(37951885-37951940)
chr1 (191-262)||(52428934-52429005)
chr1 (207-261)||(1048188-1048242)
chr1 (192-262)||(15616179-15616249)
chr1 (208-262)||(46271287-46271341)
chr1 (209-262)||(3549078-3549131)
chr1 (278-311)||(14171795-14171828)
chr1 (278-319)||(35693330-35693371)
[»] scaffold0674 (1 HSPs)
scaffold0674 (207-262)||(5196-5251)
[»] scaffold0549 (1 HSPs)
scaffold0549 (207-262)||(10119-10174)
[»] scaffold0240 (1 HSPs)
scaffold0240 (207-262)||(18542-18597)
[»] scaffold0236 (1 HSPs)
scaffold0236 (191-262)||(17510-17581)
[»] scaffold0002 (1 HSPs)
scaffold0002 (191-262)||(355221-355292)
[»] scaffold0122 (1 HSPs)
scaffold0122 (207-262)||(12110-12165)
[»] scaffold0020 (1 HSPs)
scaffold0020 (207-262)||(164260-164315)
[»] scaffold0008 (1 HSPs)
scaffold0008 (278-317)||(259127-259166)


Alignment Details
Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 511 - 787
Target Start/End: Original strand, 26503516 - 26503792
Alignment:
Q  511 agaggttctttccttctgaatttggaaatgaagtggaccgaaatcatggagtgaatgaaggaaagcttgtatttgatactaaggccaaatttcgtagagc 610  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26503516 agaggttctttccatctgaatttggaaatgatgtggaccgaaatcatggagtgaatgaaggaaagcttgtatttgatactaaggccaaatttcgtagagc 26503615  T
Q  611 cattgaggatgaaggaattccccatacatatgtggttgcaaactttctcactcgacatttcctaccaactcaatcacaacttattgacacaacttctcca 710  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  26503616 cattgaggatgaaggaattccccatacatatgtggttgcaaactttctcactcgacatttcctaccaactaaatcacaacttaatgacacaacttttcca 26503715  T
Q  711 ttagacacagttattatccttggggatggaaatattaaaggtataaaacaaaaatttccttcatgattagtagttta 787  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  26503716 ttagacacagttattatccttggggatggaaatactaaaggtataaaacaaaaatatccttcatgattagtagttta 26503792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 69 - 310
Target Start/End: Complemental strand, 15496371 - 15496131
Alignment:
Q  69 catgaatatcataattataaaggcagccttcggtgcatgaattgggagttcccacgtaaacttattgctctttttttatcaaagg-aaannnnnnnnatt 167  Q
    ||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        |||    
T  15496371 catgaatatcatatttataaaggcaacctttagtgcatgaattgggagttcccacgtaaacttattgctctttttttatcaaaggaaaaaataatttatt 15496272  T
Q  168 gcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggacnnnnn 267  Q
    |||||||        |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||         
T  15496271 gcttttcaaaaaaacatgtagagtaaataggggtaattttgtaaagaaaaaattaatgcacttgaaaatatcaaaagggtcttataaaaagggacaattt 15496172  T
Q  268 nnnnncttctaaaagggtcctataataagggacggagggagta 310  Q
          |||||||||||||||||||||||||||||||||||||    
T  15496171 tttt--ttctaaaagggtcctataataagggacggagggagta 15496131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 66 - 310
Target Start/End: Complemental strand, 52575864 - 52575621
Alignment:
Q  66 ggacatgaatatcataattataaaggcagccttcggtgcatgaattgggagttcccacgtaaacttattgctc---tttttttatcaaagg-aaannnnn 161  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||         
T  52575864 ggacatgaatatcataattataaaggcagccttcaatgcatgaattgggagttcccacgtaaacttattgctctcttttttttatcaaaggaaaaaagaa 52575765  T
Q  162 nnnattgcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggga 261  Q
       ||||||||||       ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||    
T  52575764 tttattgcttttc-aaaaaatatgtagagtaaataggggtaattttgtaaagaaaaaattaatgcacttgaaaatatcaaaagggtcttataaaagggga 52575666  T
Q  262 cnnnnnnnnnncttctaaaagggtcctataataagggacggagggagta 310  Q
    |           |||||||||||||||||||||||||||||||||||||    
T  52575665 caattttt----ttctaaaagggtcctataataagggacggagggagta 52575621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 19839862 - 19839984
Alignment:
Q  182 tatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggacnnnnnnnnnncttctaaaa 281  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| ||          |||||||||    
T  19839862 tatgtagagtaaataggggtaattttgtaaagaaaaaattaatgcacttgaaaatatcaaaagggtcttataaaaaggaacaattttttttcttctaaaa 19839961  T
Q  282 gggtcctataataagggacggag 304  Q
    |||||||||||||||||||||||    
T  19839962 gggtcctataataagggacggag 19839984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 66 - 313
Target Start/End: Complemental strand, 17781643 - 17781381
Alignment:
Q  66 ggacatgaatatcataattataaaggcagccttcggtgcatgaattgggag---------------ttcccacgtaaacttattgctc-tttttttatca 149  Q
    |||||||||||||||||||||||||||||||||| ||||||||| || |||               |||||| ||||||||||||||| |||||||||||    
T  17781643 ggacatgaatatcataattataaaggcagccttcagtgcatgaa-tgagagttatactcttttgttttcccatgtaaacttattgctcttttttttatca 17781545  T
Q  150 aagg-aaannnnnnnnattgcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtc 248  Q
    |||| |||        ||||||||||       ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||    
T  17781544 aaggaaaaaagaatttattgcttttcaaaaaaatatgtagagtaaataggggtaattttgtaaagaaaaaattaatgcacttgaaaatatcaaaaggatc 17781445  T
Q  249 ttttaaaaagggacnnnnnnnnnncttctaaaagggtcctataataagggacggagggagtattt 313  Q
    || |||||||||||           |||||||||||||||||||||||||||||||| |||||||    
T  17781444 ttataaaaagggacaatttttttt-ttctaaaagggtcctataataagggacggaggtagtattt 17781381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 117 - 262
Target Start/End: Original strand, 24177904 - 24178049
Alignment:
Q  117 ttcccacgtaaacttattgctctttttttatcaaaggaaannnnnnnn-attgcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaagaa 215  Q
    |||||||||||||||||||||||| |||||||||| ||||         ||||||||||       ||||||| ||||||||||||||||||||||| ||    
T  24177904 ttcccacgtaaacttattgctcttcttttatcaaaagaaaaaagaatttattgcttttcaaaaaaatatgtagagtaaataggggtaattttgtaaataa 24178003  T
Q  216 aaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    | |||||||| ||||||||||||||||| |||||| |||||||||||    
T  24178004 ataattaatgcacttgaaaatatcaaaa-ggtcttataaaaagggac 24178049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 118 - 258
Target Start/End: Complemental strand, 17261536 - 17261395
Alignment:
Q  118 tcccacgtaaacttattgctctttttttatcaaaggaaannnnnnnn-attgcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaagaaa 216  Q
    |||||| |||||||||||||||| |||||||||||||||         ||||||||||       ||||||| ||||||| |||||||||||||||||||    
T  17261536 tcccacataaacttattgctcttcttttatcaaaggaaaaaataatttattgcttttcaaaaaaatatgtagagtaaataagggtaattttgtaaagaaa 17261437  T
Q  217 aaattaatgtacttgaaaatatcaaaatggtcttttaaaaag 258  Q
     |||||||| |||||||||||||||||  ||||| |||||||    
T  17261436 taattaatgcacttgaaaatatcaaaagagtcttataaaaag 17261395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 15496519 - 15496468
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattatagga 68  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15496519 aatatataaacatatagagaactaaacatattcttcatgaaaaattatagga 15496468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 52575987 - 52575937
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattatagg 67  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  52575987 aatatataaatatatagagaactaaacatattcttcatgaaaaattatagg 52575937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 19839729 - 19839773
Alignment:
Q  66 ggacatgaatatcataattataaaggcagccttcggtgcatgaat 110  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  19839729 ggacatgaatatcataattataaaggcagccttcagtgcatgaat 19839773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 29508905 - 29508851
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  29508905 gtaaaaaaataattaatgtacttggaaatatcaaaatggtcttataaaaagggac 29508851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 24177798 - 24177851
Alignment:
Q  13 caagaatatataaacatatagagaactaaaaatattcttcatgaaaaattatag 66  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  24177798 caagagtatataaacatatagagaattaaacatattcttcatgaaagattatag 24177851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 4094908 - 4094960
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagg 259  Q
    |||||||||| |||||||||| ||||||||| |||||||||||| ||||||||    
T  4094908 tgtaaagaaataattaatgtagttgaaaataacaaaatggtcttataaaaagg 4094960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 15496887 - 15496930
Alignment:
Q  273 cttctaaaagggtcctataataagggacggagggagtatttgtt 316  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  15496887 cttctaaaagagtcctataataagggacggagggagtatatgtt 15496930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 25474917 - 25474862
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||||||||||||| |||||  ||||| |||||||||||    
T  25474917 tgtaaagaaataattaatgtacttgaaaataacaaaagagtcttataaaaagggac 25474862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 39797551 - 39797480
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| ||||| |||||| |||||||||||    
T  39797551 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaagggtcttataaaaagggac 39797480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 45742742 - 45742848
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggacnnnnnnnnnncttctaaaagggtcctataataagggacggaggg 306  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||| |||||||||||          ||   ||||||||| |||||| ||||||||||||    
T  45742742 tgtaaagaaataattaatgtagttgaaaataacaaaagggtcttataaaaagggacaaaaaaaattctc--aaaagggtcttataattagggacggaggg 45742839  T
Q  307 agtatttgt 315  Q
    |||||||||    
T  45742840 agtatttgt 45742848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 28501323 - 28501377
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||| ||||| ||||| |||||| |||||||||||    
T  28501323 gtaaagaaataattaatgtacttggaaataccaaaagggtcttataaaaagggac 28501377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 32684714 - 32684648
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaa 257  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||||||||  |||||| ||||||    
T  32684714 taaataagggtatgttggtaaagaaataattaatgtacttgaaaatatcaaaccggtcttataaaaa 32684648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 19282012 - 19282072
Alignment:
Q  202 aattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||| |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  19282012 aattatgtaaagaaataattaatgtagttggaaataacaaaagggtcttataaaaagggac 19282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 2615881 - 2615936
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  2615881 tgtaaagaaataattaatgtagttggaaataacaaaaaggtcttataaaaagggac 2615936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 6629393 - 6629464
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| |||||  ||||| |||||||||||    
T  6629393 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaagcgtcttataaaaagggac 6629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 13498406 - 13498477
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| ||||   ||||| |||||||||||    
T  13498406 taaataagggtatgttggtaaagaaataattaatgtacttgaaaataccaaatgagtcttataaaaagggac 13498477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 17468008 - 17467937
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| ||||  | |||| |||||||||||    
T  17468008 taaataagggtatgttggtaaagaaataattaatgtacttgaaaataccaaagggatcttataaaaagggac 17467937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 26503340 - 26503399
Alignment:
Q  369 tatcattaaattacacgcaatcaaatgaatgactttcaagtagtaatgaataaaatcaaa 428  Q
    ||||| |||||||||  ||||||||||||| ||||||| | |||| ||||||||||||||    
T  26503340 tatcaataaattacaatcaatcaaatgaataactttcaggcagtattgaataaaatcaaa 26503399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 26889819 - 26889870
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaa 242  Q
    |||||| |||||  |||||||||||| |||||||||||||||||||| ||||    
T  26889819 taaataagggtatgtttgtaaagaaataattaatgtacttgaaaataccaaa 26889870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 30745719 - 30745790
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| ||| ||||| ||||  |||||| |||||||||||    
T  30745719 taaataggggtatgtatgtaaagaaataattaatgtaattggaaataacaaaggggtcttataaaaagggac 30745790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 30868720 - 30868791
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| ||||   ||||| |||||||||||    
T  30868720 taaataagggtacgttagtaaagaaataattaatgtacttgaaaataccaaaggagtcttataaaaagggac 30868791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 34273155 - 34273210
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  34273155 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 34273210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 37352644 - 37352589
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  37352644 tgtaaagaaataattaatgtagttggaaataacaaaaaggtcttataaaaagggac 37352589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 37357543 - 37357488
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  37357543 tgtaaagaaataattaatgtagttggaaataacaaaaaggtcttataaaaagggac 37357488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 47109740 - 47109791
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaa 242  Q
    |||||| |||||| || ||||||||| |||||||||||||||||||| ||||    
T  47109740 taaataagggtaagttggtaaagaaataattaatgtacttgaaaataccaaa 47109791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 50424790 - 50424845
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| |||||  ||||| |||||||||||    
T  50424790 tgtaaagaaataattaatgtagttgaaaataacaaaagagtcttataaaaagggac 50424845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 51335894 - 51335839
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  51335894 tgtaaagaaataattaatgtagttgaaaatagcaaaggggtcttataaaaagggac 51335839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 52181104 - 52181175
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||||||||   ||||| |||||||||||    
T  52181104 taaataagggtaggttggtaaagaaataattaatgtacttggaaatatcaaaggagtcttataaaaagggac 52181175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 53277122 - 53277177
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  53277122 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 53277177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 6595671 - 6595724
Alignment:
Q  209 taaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||||||||| ||||||||| ||||  | |||| |||||||||||    
T  6595671 taaagaaaaaattaatgtaattgaaaataacaaagggatcttctaaaaagggac 6595724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 52576334 - 52576371
Alignment:
Q  274 ttctaaaagggtcctataataagggacggagggagtat 311  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  52576334 ttctaaaagagtcctataataagggacggaggaagtat 52576371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 3e-87; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 9978275 - 9977981
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattataggacatgaatatcataattataaaggcagccttcggtgcatgaattgggag 116  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9978275 aatatataaacatatagagaattaaacatattcttcatgaaaaattataggacatgaatatcataattataaaggcagccttcagtgcatgaattgggag 9978176  T
Q  117 ttcccacgtaaacttattgctctttttttatcaaag-gaaannnnnnnnattgcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaagaa 215  Q
    ||||||||||||||||||||||||||||||||||||  |||        |||| |||||       ||||||| ||||||||||||||||||||||||||    
T  9978175 ttcccacgtaaacttattgctctttttttatcaaagaaaaaaagaatttattgattttcaaaaaaatatgtagagtaaataggggtaattttgtaaagaa 9978076  T
Q  216 aaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggacnnnnnnnnnncttctaaaagggtcctataataagggacggagggagta 310  Q
    |||||||||| | ||||||||||||||| |||||| |||||| |||           ||||||||||||||||||||||||||||||||||||||    
T  9978075 aaaattaatgcatttgaaaatatcaaaagggtcttataaaaaaggataattttttttcttctaaaagggtcctataataagggacggagggagta 9977981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 10620845 - 10620766
Alignment:
Q  182 tatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggga 261  Q
    ||||||| |||||||||||||||||| |||||||| |||||||| | || ||||||||||||  ||||| ||| ||||||    
T  10620845 tatgtagagtaaataggggtaattttttaaagaaataattaatgcatttaaaaatatcaaaaaagtcttataataaggga 10620766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 21069754 - 21069683
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| |||||||||||| |||||||||||    
T  21069754 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaatggtcttataaaaagggac 21069683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 9978622 - 9978658
Alignment:
Q  277 taaaagggtcctataataagggacggagggagtattt 313  Q
    |||||||||||||||||||||||||||||||||||||    
T  9978622 taaaagggtcctataataagggacggagggagtattt 9978658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 16285110 - 16285181
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||||||||  |||||| |||||||||||    
T  16285110 taaataagggtatgttggtaaagaaataattaatgtacttggaaatatcaaaggggtcttataaaaagggac 16285181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 39971114 - 39971060
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||||||||||||||  | |||| |||||||||||    
T  39971114 gtaaagaaataattaatgtacttgaaaatatcaaagggatcttataaaaagggac 39971060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 4985052 - 4985107
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  4985052 tgtaaagaaataattaatgtagttggaaataacaaaagggtcttataaaaagggac 4985107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 6673164 - 6673219
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  6673164 tgtaaagaaataattaatgtagttgaaaataacaaagaggtcttataaaaagggac 6673219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 13660978 - 13660907
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| ||| ||||| ||||  |||||| |||||||||||    
T  13660978 taaataggggtatatatgtaaagaaataattaatgtagttggaaataacaaaggggtcttataaaaagggac 13660907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 17674594 - 17674649
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  17674594 tgtaaagaaataattaatgtagttggaaataacaaaagggtcttataaaaagggac 17674649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 20186618 - 20186547
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| ||| |||||  |||| |||||| |||||||||||    
T  20186618 taaataggggtatgtatgtaaagaaataattaatgtagttggaaatagtaaaagggtcttataaaaagggac 20186547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 20988149 - 20988204
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  20988149 tgtaaagaaataattaatgtagttggaaatagcaaaaaggtcttataaaaagggac 20988204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 24857673 - 24857602
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||| ||||||  |||||| |||||||||||    
T  24857673 taaataagggtacgttggtaaagaaataattaatgtacttggaaacatcaaaggggtcttataaaaagggac 24857602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 26605559 - 26605614
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||||||||  |||||| |||||||||||    
T  26605559 tgtaaagaaataattaatgtagttggaaatatcaaaggggtcttataaaaagggac 26605614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 31158360 - 31158415
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| |||||||||  ||| ||||||| |||||||||||    
T  31158360 tgtaaagaaataattaatgtaattgaaaatagaaaagtggtcttataaaaagggac 31158415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 31642304 - 31642233
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| ||||| |||||||| ||||||||||  |||||| |||||||||||    
T  31642304 taaataagggtaggttggtaaagaaataattagtgtacttggaaatatcaaaggggtcttataaaaagggac 31642233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 31657801 - 31657730
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| |||||  ||||| |||||||||||    
T  31657801 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaagagtcttataaaaagggac 31657730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 35547378 - 35547307
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| |||||||||  |||  |||||| |||||||||||    
T  35547378 taaataggggtatgtatgtaaagaaataattaatgtagttgaaaatagaaaagaggtcttataaaaagggac 35547307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 35784837 - 35784908
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||| ||||||   ||||| |||||||||||    
T  35784837 taaataagggtatgttggtaaagaaataattaatgtacttgaaaacatcaaagaagtcttataaaaagggac 35784908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 37206236 - 37206169
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaag 258  Q
    |||| |||||||  |||||||||||  ||||||||||| |||||||||||||| | |||| |||||||    
T  37206236 taaacaggggtatgtttgtaaagaatcaattaatgtacatgaaaatatcaaaaagttcttataaaaag 37206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 43060347 - 43060402
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  43060347 tgtaaagaaataattaatgtagttggaaatagcaaaagggtcttataaaaagggac 43060402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 15559632 - 15559579
Alignment:
Q  209 taaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||| |||||||||||||||||||| ||||  |||||| |||||| ||||    
T  15559632 taaagaaataattaatgtacttgaaaataccaaagaggtcttataaaaaaggac 15559579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 26889625 - 26889592
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtat 311  Q
    |||||||||||||||| |||||||||||||||||    
T  26889625 aaaagggtcctataattagggacggagggagtat 26889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 34258679 - 34258712
Alignment:
Q  277 taaaagggtcctataataagggacggagggagta 310  Q
    ||||||||||||||||||||||||||||| ||||    
T  34258679 taaaagggtcctataataagggacggaggtagta 34258712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 2e-82; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 17 - 310
Target Start/End: Original strand, 10284395 - 10284691
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattataggacatgaatatcataattataaaggcagccttcggtgcatgaattgggag 116  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10284395 aatatataaacatatagaggactaaacatattcttcatgaaaaattataggacatgaatatcataattataaaggcagccttcagtgcatgaattgggag 10284494  T
Q  117 ttcccacgtaaacttattgctc--tttttttatcaaagg-aaannnnnnnnattgcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaag 213  Q
    ||||||| ||||||||||||||  ||||||||||||||| |||        ||||||||||       ||||||| ||||||||||||||||||||||||    
T  10284495 ttcccacataaacttattgctctttttttttatcaaaggaaaaaagaatttattgcttttcaaaaaaatatgtagagtaaataggggtaattttgtaaag 10284594  T
Q  214 aaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggacnnnnnnnnnnctt-ctaaaagggtcctataataagggacggagggagta 310  Q
     ||||||||||| ||||||||||||||||| |||||| |||||||||||          ||| |||||||||||||||||||||||||||||||||||    
T  10284595 -aaaaattaatgcacttgaaaatatcaaaagggtcttataaaaagggacaattttttttcttcctaaaagggtcctataataagggacggagggagta 10284691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 17 - 319
Target Start/End: Complemental strand, 9794886 - 9794581
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattataggacatgaatatcataattataaaggcagccttcggtgcatgaattgggag 116  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9794886 aatatataaacatatagagaactaaatatattcttcatgaaaaattataggacatgaatatcataattataaaggcagccttcggtgtatgaattgggag 9794787  T
Q  117 ttcccacgtaaacttattgctcttt--ttttatcaaagg-aaannnnnnnnattgcttttc-nnnnnnntatgtagtgtaaataggggtaattttgtaaa 212  Q
    |||||||||||||||||||||||||  |||||||||||| |||        ||||||||||        ||||||| |||||||||||||||||||||||    
T  9794786 ttcccacgtaaacttattgctctttttttttatcaaaggaaaaaagaatttattgcttttcaaaaaaaatatgtagagtaaataggggtaattttgtaaa 9794687  T
Q  213 gaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggacnnnnnnnnnncttctaaaagggtcctataataagggacggagggagtatt 312  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| |||||           | |||||||| |||||||||||||||||||||||||| |    
T  9794686 gaaaaaattaatgcacttgaaaatatcaaaatggttttataaaaggggacaatttttttt-tcctaaaaggatcctataataagggacggagggagtaat 9794588  T
Q  313 tgttaag 319  Q
     ||||||    
T  9794587 agttaag 9794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 88 - 262
Target Start/End: Original strand, 1330822 - 1330998
Alignment:
Q  88 aaggcagccttcggtgcatgaattgggagttcccacgtaaacttattgctcttttttt-atcaaaggaaannnnnnnn-attgcttttcnnnnnnntatg 185  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||         ||||||||||       ||||    
T  1330822 aaggcagccttcagtgcatcaattgagagttcccacgtaaacttattgctcttttttttatcaaaggaaaaaagaatttattgcttttcaaaaaaatatg 1330921  T
Q  186 tagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  1330922 tagagtaaataggggtaattgtgtaaagaaaaaattaatgcacttgaaaatatcaaaagggtcttataaaaagggac 1330998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 66 - 258
Target Start/End: Complemental strand, 38670276 - 38670068
Alignment:
Q  66 ggacatgaatatcataattataaaggcagccttcggtgcatgaattgggagttc---------------ccacgtaaacttattgctcttttttt-atca 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||               |||||||||||||||||||||||||| ||||    
T  38670276 ggacatgaatatcataattataaaggcagccttcggtgcatgaat-gagagttctactcttttattttcccacgtaaacttattgctcttttttttatca 38670178  T
Q  150 aaggaaannnnnnnn-attgcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtc 248  Q
    |||||||         ||| ||||||       ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  38670177 aaggaaaaaagaatttattacttttcaaaaaaatatgtagagtaaataggggtaattttgtaaagaaaaaattaatgcacttgaaaatatcaaaattgtc 38670078  T
Q  249 ttttaaaaag 258  Q
    || |||||||    
T  38670077 ttataaaaag 38670068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 311
Target Start/End: Original strand, 16869488 - 16869616
Alignment:
Q  182 tatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtctt-ttaaaaagggacnnnnnnnnnncttctaaa 280  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| | |||||| |||           |||||||    
T  16869488 tatgtagagtaaataggggtaattttgtaaagaaataattaatgcacttgaaaatatcaaaagggtcttataaaaaagagacaaatttgtt--ttctaaa 16869585  T
Q  281 agggtcctataataagggacggagggagtat 311  Q
    ||||||||||||||||||||||||| |||||    
T  16869586 agggtcctataataagggacggaggtagtat 16869616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 48921787 - 48921669
Alignment:
Q  190 gtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggacnnnnnnnnnncttctaaaagggtccta 289  Q
    |||||||  |||||||||||||||||| |||||||  ||||||||||||||||| |||||| ||||||| |||           ||||||||||||||||    
T  48921787 gtaaataatggtaattttgtaaagaaataattaatacacttgaaaatatcaaaagggtcttataaaaagagacaaatatttt--ttctaaaagggtccta 48921690  T
Q  290 taataagggacggagggagta 310  Q
    |||||||||||||||| ||||    
T  48921689 taataagggacggaggtagta 48921669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 1328049 - 1328100
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattatagga 68  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  1328049 aatatataaacatatagagaattaaacatattcttcatgaaaaattatagga 1328100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 10284040 - 10284003
Alignment:
Q  274 ttctaaaagggtcctataataagggacggagggagtat 311  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10284040 ttctaaaagggtcctataataagggacggagggagtat 10284003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 52693626 - 52693679
Alignment:
Q  209 taaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||| |||||||||||||| ||||| |||||||||||| |||||||||||    
T  52693626 taaagaaataattaatgtacttggaaataccaaaatggtcttataaaaagggac 52693679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 12918758 - 12918829
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| ||||| | |||| |||||||||||    
T  12918758 taaataagggtatgttggtaaagaaataattaatgtacttgaaaataccaaaaggatcttataaaaagggac 12918829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 15095315 - 15095244
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| ||||| ||| ||||| ||| |||||||||||||||||||||||||  | |||| |||||||||||    
T  15095315 taaataagggtagtttggtaaacaaataattaatgtacttgaaaatatcaaagggatcttataaaaagggac 15095244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 27646226 - 27646293
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaag 258  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| ||||| |||||| |||||||    
T  27646226 taaataagggtatcttagtaaagaaataattaatgtacttgaaaataccaaaagggtcttataaaaag 27646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 30040953 - 30041008
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| ||| |||||||||| ||||||||| |||||||||||| |||||||||||    
T  30040953 tgtaaataaataattaatgtagttgaaaataacaaaatggtcttataaaaagggac 30041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 30819995 - 30819924
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||||||||  |||||| |||||||||||    
T  30819995 taaataagggtatgttagtaaagaaataattaatgtacttggaaatatcaaaggggtcttataaaaagggac 30819924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 39952372 - 39952317
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||| |||||||||||    
T  39952372 tgtaaagaaataattaatgtagttgaaaataacaaaagggtcttataaaaagggac 39952317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 9795236 - 9795272
Alignment:
Q  274 ttctaaaagggtcctataataagggacggagggagta 310  Q
    ||||||||||||| |||||||||||||||||||||||    
T  9795236 ttctaaaagggtcttataataagggacggagggagta 9795272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 38670793 - 38670829
Alignment:
Q  274 ttctaaaagggtcctataataagggacggagggagta 310  Q
    |||||||||||||||||||||||||||||||| ||||    
T  38670793 ttctaaaagggtcctataataagggacggaggtagta 38670829  T

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Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 1111568 - 1111635
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaag 258  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| ||||| |||||| |||||||    
T  1111568 taaataagggtatcttggtaaagaaataattaatgtacttggaaataccaaaagggtcttataaaaag 1111635  T

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Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 7051656 - 7051711
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  7051656 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 7051711  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 7181467 - 7181396
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| ||| ||||| ||||  |||||| |||||||||||    
T  7181467 taaataggggtatgtatgtaaagaaataattaatgtagttggaaatagcaaaggggtcttataaaaagggac 7181396  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 8379794 - 8379723
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||||||||  |||||| |||||| ||||    
T  8379794 taaataagggtatgttggtaaagaaataattaatgtacttggaaatatcaaatgggtcttataaaaaaggac 8379723  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 17753471 - 17753526
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  17753471 tgtaaagaaataattaatgtaattggaaataacaaaagggtcttataaaaagggac 17753526  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 19054791 - 19054846
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  19054791 tgtaaagaaataattaatgtaattggaaataacaaaagggtcttataaaaagggac 19054846  T

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Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 20877734 - 20877679
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||| | |||| |||||||||||    
T  20877734 tgtaaagaaataattaatgtagttgaaaatagcaaaaagatcttataaaaagggac 20877679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 26221389 - 26221334
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  26221389 tgtaaagaaataattaatgtagttggaaataacaaaagggtcttataaaaagggac 26221334  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 26593701 - 26593756
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| |||||  ||||| |||||||||||    
T  26593701 tgtaaagaaataattaatgtagttgaaaataacaaaagagtcttataaaaagggac 26593756  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 42526545 - 42526616
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| ||||||||||||||||||||  |||  |||||| |||||||||||    
T  42526545 taaataagggtatgttagtaaagaaataattaatgtacttgaaaatactaaagaggtcttgtaaaaagggac 42526616  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 45252874 - 45252819
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  45252874 tgtaaagaaataattaatgtagttggaaataacaaaagggtcttataaaaagggac 45252819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 46861721 - 46861666
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  46861721 tgtaaagaaataattaatgtagttgaaaatagcaaaggggtcttataaaaagggac 46861666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 47008422 - 47008493
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| ||||  |||||| |||||||||||    
T  47008422 taaataagggtatgttagtaaagaaataattaatgtacttggaaataccaaaggggtcttataaaaagggac 47008493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 47067035 - 47066980
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||| ||||||| |||||||||||    
T  47067035 tgtaaagaaataattaatgtagttggaaatagcaaagtggtcttataaaaagggac 47066980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 48904183 - 48904254
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| |||||  ||||| |||||||||||    
T  48904183 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaagagtcttataaaaagggac 48904254  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 17589813 - 17589867
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||||||||| ||||   ||||| |||||||||||    
T  17589813 gtaaagaaataattaatgtacttgaaaataccaaatgagtcttataaaaagggac 17589867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 48902645 - 48902699
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||| ||| |||||||||||||| ||||| ||||| |||||| |||||||||||    
T  48902645 gtaaaaaaataattaatgtacttggaaataccaaaagggtcttataaaaagggac 48902699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 26058645 - 26058592
Alignment:
Q  209 taaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  26058645 taaagaaataattaatgtagttggaaataacaaaagggtcttataaaaagggac 26058592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 32978745 - 32978778
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtat 311  Q
    |||||||||||||||| |||||||||||||||||    
T  32978745 aaaagggtcctataattagggacggagggagtat 32978778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 44561616 - 44561685
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggg 260  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| ||||  |||||| |||||||||    
T  44561616 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaggggtcttataaaaaggg 44561685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Original strand, 54638406 - 54638447
Alignment:
Q  506 tttatagaggttctttccttctgaatttggaaatgaagtgga 547  Q
    ||||||||| ||||||||||||||||| |||||||| |||||    
T  54638406 tttatagagattctttccttctgaattcggaaatgatgtgga 54638447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 5e-49; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 66 - 262
Target Start/End: Complemental strand, 24282278 - 24282077
Alignment:
Q  66 ggacatgaatatcataattataaaggcagccttcggtgcatgaattgggagttcccacgtaaacttattgct-ctttttttatcaaaggaaa----nnnn 160  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||            
T  24282278 ggacatgaatatcataattataaaggcagccttcaatgcatgaattgggagttcccacgtaaatttattgctattttttttatcaaaggaaaaaagaatt 24282179  T
Q  161 nnnnattgcttttcnnnnnnntatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggg 260  Q
        ||||||||||       ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||    
T  24282178 tattattgcttttcaaaaaaatatgtagggtaaataggggtaattttgtaaagaaaaaattaatgcacttgaaaatatcaaaagggtcttataaaaaggg 24282079  T
Q  261 ac 262  Q
    ||    
T  24282078 ac 24282077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 88 - 262
Target Start/End: Complemental strand, 42538738 - 42538562
Alignment:
Q  88 aaggcagccttcggtgcatgaattgggagttcccacgtaaacttattgctcttttttt-atcaaaggaaannnnnnnn-attgcttttcnnnnnnntatg 185  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||| |||         ||||||||||       ||||    
T  42538738 aaggcagccttcagtgcatcaattgagagttcccacgtaaacttattgctcttttttttatcaaagaaaaaaagaatttattgcttttcaaaaaaatatg 42538639  T
Q  186 tagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  42538638 tagagtaaataggggtaattttgtaaagaaaaaattaatgcacttgaaaatatcaaaagagtcttataaaaagggac 42538562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 42541506 - 42541455
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattatagga 68  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  42541506 aatatataaacatatagagaattaaacatattcttcatgaaaaattatagga 42541455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 25594323 - 25594274
Alignment:
Q  19 tatataaacatatagagaactaaaaatattcttcatgaaaaattatagga 68  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  25594323 tatatatacatataaagaactaaacatattcttcatgaaaaattatagga 25594274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 26255196 - 26255141
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||||||||||| |||||||||||    
T  26255196 tgtaaagaaataattaatgtagttggaaataacaaaatggtcttataaaaagggac 26255141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 27813617 - 27813546
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| ||||||| |||||||||||||||||  |||||| |||||||||||    
T  27813617 taaataagggtaggttggtaaagaaataattaatatacttgaaaatatcaaaggggtcttataaaaagggac 27813546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 30534822 - 30534751
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||||||||   ||||| |||||||||||    
T  30534822 taaataagggtatgttggtaaagaaataattaatgtacttgaaaatatcaaaggagtcttataaaaagggac 30534751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 32699624 - 32699695
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||||||||  |||||| |||||||||||    
T  32699624 taaataagggtatgttggtaaagaaataattaatgtacttggaaatatcaaaggggtcttataaaaagggac 32699695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 34693517 - 34693466
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaa 242  Q
    |||||| |||||  || |||||||||||||||||||||||||||||||||||    
T  34693517 taaataagggtatgttggtaaagaaaaaattaatgtacttgaaaatatcaaa 34693466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 44510280 - 44510334
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||| ||||||||||  |||||| |||||||||||    
T  44510280 gtaaagaaataattaatgtacttggaaatatcaaaggggtcttataaaaagggac 44510334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 49045057 - 49045111
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||| ||||||||||  |||||| |||||||||||    
T  49045057 gtaaagaaataattaatgtacttggaaatatcaaagaggtcttataaaaagggac 49045111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 25594133 - 25594072
Alignment:
Q  182 tatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaa 243  Q
    ||||||| |||||| ||| |||||||||||| ||| |||||||||| |||||||||| ||||    
T  25594133 tatgtagagtaaatggggctaattttgtaaaaaaataattaatgtatttgaaaatattaaaa 25594072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 6387426 - 6387371
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  6387426 tgtaaagaaataattaatgtagttgaaaataacaaagaggtcttataaaaagggac 6387371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 7449370 - 7449315
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  7449370 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 7449315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 8291004 - 8290949
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  8291004 tgtaaagaaataattaatgtagttgaaaataacaaatgggtcttataaaaagggac 8290949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 9299214 - 9299143
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| ||||||||| ||||  || ||| |||||||||||    
T  9299214 taaataggggtatgtatgtaaagaaataattaatgtagttgaaaatagcaaaggggacttataaaaagggac 9299143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 9998388 - 9998333
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  9998388 tgtaaagaaataattaatgtagttggaaatagcaaaagggtcttgtaaaaagggac 9998333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 18113103 - 18113158
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||| ||| || |||||||||||    
T  18113103 tgtaaagaaataattaatgtagttgaaaataacaaaagggttttataaaaagggac 18113158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 21295252 - 21295197
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  21295252 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 21295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 29285973 - 29286028
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  29285973 tgtaaagaaataattaatgtagttggaaataacaaaagggtcttataaaaagggac 29286028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 30895661 - 30895606
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  30895661 tgtaaagaaataattaatgtagttgaaaatagcaaaggggtcttataaaaagggac 30895606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 34012454 - 34012509
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||||||| ||||| |||||  ||||| |||||||||||    
T  34012454 tgtaaagaaataattaatgtacttggaaatagcaaaagagtcttataaaaagggac 34012509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 35888429 - 35888358
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| ||||||||| |||| ||||| ||||||| |||| |||||||||||    
T  35888429 taaataagggtatgttggtaaagaaataattaatgttcttggaaataccaaaatgctcttataaaaagggac 35888358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 39197819 - 39197764
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| |||||  ||||| |||||||||||    
T  39197819 tgtaaagaaataattaatgtagttgaaaataacaaaagagtcttataaaaagggac 39197764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 40300331 - 40300276
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  40300331 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 40300276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 41026032 - 41026087
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  41026032 tgtaaagaaataattaatgtagttgaaaataacaaatgggtcttataaaaagggac 41026087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 47657600 - 47657655
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||| ||||||| |||||||||||    
T  47657600 tgtaaagaaataattaatgtagttggaaatagcaaagtggtcttataaaaagggac 47657655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 19497357 - 19497307
Alignment:
Q  192 aaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaa 242  Q
    |||||||||||  || ||||||||| |||||||||| ||||||||||||||    
T  19497357 aaataggggtatcttagtaaagaaataattaatgtaattgaaaatatcaaa 19497307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 24504801 - 24504731
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggga 261  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| |||||  ||||| ||||||||||    
T  24504801 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaagagtcttataaaaaggga 24504731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 24282728 - 24282764
Alignment:
Q  274 ttctaaaagggtcctataataagggacggagggagtat 311  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24282728 ttctaaaagg-tcctataataagggacggagggagtat 24282764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 45722107 - 45722054
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggga 261  Q
    ||||||||| |||||||||||||||||||| ||||  | |||| ||||||||||    
T  45722107 gtaaagaaataattaatgtacttgaaaataccaaagagatcttataaaaaggga 45722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 3e-41; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 96 - 310
Target Start/End: Original strand, 4745951 - 4746168
Alignment:
Q  96 cttcggtgcatgaattgggagttcccacgtaaacttattgctcttttttt-atcaaaggaaannnnnnnn-attgcttttcnnnnnnntatgtagtgtaa 193  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||         ||||||||||       ||||||| ||||    
T  4745951 cttcagtgcatgaattgggagttcccacgtaaacttattgctcttttttttatcaaaggaaaaaagaatttattgcttttcaaaacaatatgtagagtaa 4746050  T
Q  194 ataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac-nnnnnnnnnncttctaaaagggtcctataa 292  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| |||||||||||           ||||||||||| | ||||||    
T  4746051 ataggggtaattttgtaaagaaaaaattaatgcacttgaaaatatcaaaaggatcttataaaaagggacaatttttttttcttctaaaaggattctataa 4746150  T
Q  293 taagggacggagggagta 310  Q
    ||||||||||||||||||    
T  4746151 taagggacggagggagta 4746168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 5575490 - 5575425
Alignment:
Q  193 aataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaag 258  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||| |||||||    
T  5575490 aataggggtaattttgtaaagaaataattaatgcacttgaaaatatcaaaaaagtcttataaaaag 5575425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 22710383 - 22710312
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| ||||| ||| ||||||||| |||||||||||||||||||| ||||| |||||| |||||||||||    
T  22710383 taaataagggtattttggtaaagaaataattaatgtacttgaaaataccaaaagggtcttataaaaagggac 22710312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 5140047 - 5139995
Alignment:
Q  190 gtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaa 242  Q
    ||||||||||||||||||||||||||| |||||||||| || |||||||||||    
T  5140047 gtaaataggggtaattttgtaaagaaataattaatgtatttaaaaatatcaaa 5139995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 6418572 - 6418643
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||||||||  |||||| |||||||||||    
T  6418572 taaataagggtatgttggtaaagaaataattaatgtacttgaaaatatcaaagaggtcttataaaaagggac 6418643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 180687 - 180634
Alignment:
Q  190 gtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaa 243  Q
    ||||||| ||||||||||||||||||| |||||||  |||||||||||||||||    
T  180687 gtaaataagggtaattttgtaaagaaataattaatacacttgaaaatatcaaaa 180634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 25197269 - 25197199
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggga 261  Q
    ||||||||||||  | |||||||||| |||||||||| ||| ||||| ||||| |||||| ||||||||||    
T  25197269 taaataggggtatgtatgtaaagaaataattaatgtagttggaaataacaaaagggtcttataaaaaggga 25197199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 262
Target Start/End: Original strand, 2614120 - 2614192
Alignment:
Q  190 gtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||||||||||||||||||||  ||||||||| |||| |||   ||||  ||||| |||||||||||    
T  2614120 gtaaataggggtaattttgtaaagaaatcattaatgtagttgacaattgtaaaagagtcttataaaaagggac 2614192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 1147203 - 1147258
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  1147203 tgtaaagaaataattaatgtagttggaaatagcaaaagggtcttataaaaagggac 1147258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 1730038 - 1730093
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  1730038 tgtaaagaaataattaatgtagttggaaatagcaaaagggtcttataaaaagggac 1730093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 6147484 - 6147429
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  6147484 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 6147429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 8743288 - 8743233
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||||||| ||||| ||||  |||||| |||||||||||    
T  8743288 tgtaaagaaataattaatgtacttggaaataacaaaggggtcttataaaaagggac 8743233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 11656282 - 11656337
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  11656282 tgtaaagaaataattaatgtagttgaaaatagcaaaggggtcttataaaaagggac 11656337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 11847672 - 11847617
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  11847672 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 11847617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 18106107 - 18106158
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaag 258  Q
    |||||||||| |||||||||||||| ||||| ||||| |||||| |||||||    
T  18106107 tgtaaagaaataattaatgtacttggaaataacaaaagggtcttataaaaag 18106158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 231044 - 231097
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||| ||||||||| |||| ||||||| |||||||||||    
T  231044 gtaaagaaataattaatgtagttgaaaataacaaa-tggtcttataaaaagggac 231097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 8217656 - 8217710
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||||||||| |||||  ||||| |||||| ||||    
T  8217656 gtaaagaaataattaatgtacttgaaaataccaaaagagtcttataaaaatggac 8217710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 23398059 - 23398129
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggga 261  Q
    ||||||||||||  | |||||||||| |||||||||| ||| ||||| ||||  |||||| ||||||||||    
T  23398059 taaataggggtatgtatgtaaagaaataattaatgtagttggaaataacaaaggggtcttataaaaaggga 23398129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 4745100 - 4745063
Alignment:
Q  274 ttctaaaagggtcctataataagggacggagggagtat 311  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  4745100 ttctaaaagagtcctataataagggacggaggaagtat 4745063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 13647900 - 13647867
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtat 311  Q
    ||||||||| ||||||||||||||||||||||||    
T  13647900 aaaagggtcttataataagggacggagggagtat 13647867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 3e-35; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 10636798 - 10636698
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattataggacatgaatatcataattataaaggcagccttcggtgcatgaattgggag 116  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||    
T  10636798 aatatataaacatatagagtactaaacatattcttcatgaaaaattataggacatgaatatcataattataaaagcagccttcagtatatgaattgggag 10636699  T
Q  117 t 117  Q
    |    
T  10636698 t 10636698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 10637146 - 10637183
Alignment:
Q  274 ttctaaaagggtcctataataagggacggagggagtat 311  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10637146 ttctaaaagggtcctataataagggacggagggagtat 10637183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 5109998 - 5109927
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| ||||  |||||| |||||||||||    
T  5109998 taaataagggtatgttagtaaagaaataattaatgtacttgaaaataccaaatgggtcttataaaaagggac 5109927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 17336535 - 17336464
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| ||||||||||||||||||||  |||| |||||| |||||||||||    
T  17336535 taaataagggtatgttggtaaagaaataattaatgtacttgaaaatacaaaaaaggtcttataaaaagggac 17336464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 19176253 - 19176182
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| ||||| |||||| |||||||||||    
T  19176253 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaagggtcttataaaaagggac 19176182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 45425136 - 45425081
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||| |||||||||||    
T  45425136 tgtaaagaaataattaatgtagttgaaaatagcaaaaaggtcttataaaaagggac 45425081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 35179700 - 35179646
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||||||||||||||  |||||| |||||| ||||    
T  35179700 gtaaagaaataattaatgtacttgaaaatatcaaaggggtcttataaaaaaggac 35179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 39029441 - 39029483
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtatttgttaaga 320  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  39029441 aaaagggtcctataattagggacggagggagtattttttaaga 39029483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 13141559 - 13141506
Alignment:
Q  209 taaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||| |||||||| |||| |||||||||||| |||||| |||||||||||    
T  13141559 taaagaaataattaatggacttaaaaatatcaaaaaggtcttataaaaagggac 13141506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 36408515 - 36408462
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggga 261  Q
    ||||||||| |||||||||||| ||||||||||||  |||||| ||||||||||    
T  36408515 gtaaagaaataattaatgtactagaaaatatcaaaggggtcttataaaaaggga 36408462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 312
Target Start/End: Complemental strand, 2944046 - 2944011
Alignment:
Q  277 taaaagggtcctataataagggacggagggagtatt 312  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2944046 taaaagggtcctataattagggacggagggagtatt 2944011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 5951219 - 5951164
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  5951219 tgtaaagaaataattaatgtagttgaaaatagcaaaggggtcttataaaaagggac 5951164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 11483056 - 11483111
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| |||||||||  ||| ||||||| |||||||||||    
T  11483056 tgtaaagaaataattaatgtagttgaaaatagaaaagtggtcttataaaaagggac 11483111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 13154029 - 13153974
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  13154029 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 13153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 14699553 - 14699498
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  14699553 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 14699498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 29598325 - 29598270
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| |||||  ||||| |||||||||||    
T  29598325 tgtaaagaaataattaatgtagttgaaaataacaaaaatgtcttataaaaagggac 29598270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 36177039 - 36177094
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  36177039 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 36177094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 36941386 - 36941315
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| ||||  | |||| |||||||||||    
T  36941386 taaataagggtatgttggtaaagaaataattaatgtacttgaaaataccaaatagatcttataaaaagggac 36941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 37023203 - 37023274
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| ||||||| |||||||||||||||||  ||| || |||||||||||    
T  37023203 taaataagggtatgttggtaaagaaataattaatatacttgaaaatatcaaagaggttttataaaaagggac 37023274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 278 - 312
Target Start/End: Original strand, 26016833 - 26016867
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtatt 312  Q
    |||||||||||||||| ||||||||||||||||||    
T  26016833 aaaagggtcctataattagggacggagggagtatt 26016867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 5e-18; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 7016198 - 7016131
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaag 258  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||| |||||||    
T  7016198 taaataggggtaattttgtaaagaaataattaatatacttgaaaatattaaaatgatcttataaaaag 7016131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 42238519 - 42238574
Alignment:
Q  13 caagaatatataaacatatagagaactaaaaatattcttcatgaaaaattatagga 68  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  42238519 caagagtatatatacatatagagaactaaacatattcttcatgaaaaattatagga 42238574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 13215739 - 13215808
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggg 260  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||||||||| |||||| |||||||||    
T  13215739 taaataagggtatgttggtaaagaaataattaatgtacttggaaatatcaaaagggtcttataaaaaggg 13215808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 43700711 - 43700663
Alignment:
Q  214 aaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||    
T  43700711 aaaaaattaatgtacttgaaaatatcaaaggggtcttataaaaagggac 43700663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 9701187 - 9701116
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| ||||| |||||| |||||||||||    
T  9701187 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaagggtcttataaaaagggac 9701116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 12360557 - 12360502
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||||||||||| |||||||||||    
T  12360557 tgtaaagaaataattaatgtagttggaaatagcaaaatggtcttataaaaagggac 12360502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 16669727 - 16669672
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||| |||||||||||    
T  16669727 tgtaaagaaataattaatgtagttgaaaataacaaaagggtcttataaaaagggac 16669672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 36130964 - 36131019
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||| |||||||||||    
T  36130964 tgtaaagaaataattaatgtagttgaaaataacaaaaaggtcttataaaaagggac 36131019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 40607819 - 40607748
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  40607819 taaataggggtatgtatgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 40607748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 36750821 - 36750875
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||| ||||||||||  |||||| |||||||||||    
T  36750821 gtaaagaaataattaatgtacttggaaatatcaaagaggtcttataaaaagggac 36750875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 7016571 - 7016520
Alignment:
Q  18 atatataaacatatagagaactaaaaatattcttcat-gaaaaattatagga 68  Q
    ||||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  7016571 atatatacacatatagagaactaaacatattcttcataaaaaaattatagga 7016520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 8990321 - 8990250
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| ||| ||||| ||||| ||| || |||||||||||    
T  8990321 taaataggggtatgtatgtaaagaaataattaatgtagttggaaataacaaaagggttttataaaaagggac 8990250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 29239529 - 29239584
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  29239529 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 29239584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 32121045 - 32120990
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  32121045 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 32120990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 32511120 - 32511065
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  32511120 tgtaaagaaataattaatgtagttgaaaatagcaaataggtcttataaaaagggac 32511065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 40680844 - 40680773
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| ||||||| || ||||||||| ||||  |||||| |||||||||||    
T  40680844 taaataggggtatgtatgtaaagaaataattaatatagttgaaaataacaaaggggtcttataaaaagggac 40680773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 41422629 - 41422558
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| |||||  || || |||||||||||    
T  41422629 taaataagggtatgttggtaaagaaataattaatgtacttgaaaataccaaaagagttttataaaaagggac 41422558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 41494542 - 41494613
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| |||||  || || |||||||||||    
T  41494542 taaataagggtatgttggtaaagaaataattaatgtacttgaaaataccaaaagagttttataaaaagggac 41494613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 27725631 - 27725681
Alignment:
Q  209 taaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagg 259  Q
    |||||||| ||||||||||||| |||||||||||  |||||| ||||||||    
T  27725631 taaagaaataattaatgtacttaaaaatatcaaagaggtcttataaaaagg 27725681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 34432137 - 34432191
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||| ||| ||||||  |||||| |||||||||||    
T  34432137 gtaaagaaataattaatgtacttggaaacatcaaaggggtcttataaaaagggac 34432191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 40544424 - 40544370
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||| ||||||||||   ||||| |||||||||||    
T  40544424 gtaaagaaataattaatgtacttggaaatatcaaatgagtcttataaaaagggac 40544370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 15227922 - 15227889
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtat 311  Q
    |||||||||||||||| |||||||||||||||||    
T  15227922 aaaagggtcctataattagggacggagggagtat 15227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 17649248 - 17649299
Alignment:
Q  17 aatatataaacatatagagaactaaaaatattcttcatgaaaaattatagga 68  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  17649248 aatatataaacatatagagaactaaacatattcttcatgaaatattatagga 17649299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 15302681 - 15302735
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  15302681 gtaaagaaataattaatgtacttgaaaataccaaaatggtcttataaaaagggac 15302735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 50225329 - 50225405
Alignment:
Q  182 tatgtagtgtaaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaag 258  Q
    ||||||| ||||||| || |||||||||||||||| |||||||| ||||||||||||||| |  ||||| |||||||    
T  50225329 tatgtagagtaaataaggataattttgtaaagaaataattaatgcacttgaaaatatcaatagagtcttataaaaag 50225405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 29437774 - 29437845
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||| ||||||||||||||||||||  |||||| |||||||||||    
T  29437774 taaataagggtatgttggtaaagaaataattgatgtacttgaaaatatcaaaggggtcttataaaaagggac 29437845  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 39627156 - 39627227
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  |||||||||||| |||||  ||||||||||||||||||  |||||| |||||||||||    
T  39627156 taaataagggtagatttgtaaagaaataattagcgtacttgaaaatatcaaagaggtcttataaaaagggac 39627227  T

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Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 49549101 - 49549047
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||| ||||| ||||| |||||| |||||||||||    
T  49549101 gtaaagaaataattaatgtacttggaaataccaaaagggtcttataaaaagggac 49549047  T

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Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 50225012 - 50225052
Alignment:
Q  28 atatagagaactaaaaatattcttcatgaaaaattatagga 68  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  50225012 atatagaaaactaaacatattcttcatgaaaaattatagga 50225052  T

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Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 1767798 - 1767853
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  1767798 tgtaaagaaataattaatgtagttgaaaatagcaaaggggtcttataaaaagggac 1767853  T

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Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 4102650 - 4102705
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  4102650 tgtaaagaaataattaatgtagttgaaaatagcaaaggggtcttataaaaagggac 4102705  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 11907164 - 11907219
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  11907164 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 11907219  T

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Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 21290238 - 21290167
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| ||||| |||||||| ||||||||||  |||||| |||||||||||    
T  21290238 taaataagggtaggttggtaaagaaataattagtgtacttggaaatatcaaaggggtcttataaaaagggac 21290167  T

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Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 23542096 - 23542025
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||||||  | |||||||||| |||||||||| ||| ||||| ||||  |||||| |||||||||||    
T  23542096 taaataggggtatgtatgtaaagaaataattaatgtagttggaaataacaaaggggtcttataaaaagggac 23542025  T

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Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 27037370 - 27037315
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| |||||||||  |||| |||||| |||||||||||    
T  27037370 tgtaaagaaataattaatgtagttgaaaatagaaaaagggtcttataaaaagggac 27037315  T

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Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 27530538 - 27530593
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||| ||||||| |||||||||||    
T  27530538 tgtaaagaaataattaatgtagttggaaatagcaaagtggtcttataaaaagggac 27530593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 28052290 - 28052235
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  28052290 tgtaaagaaataattaatgtagttgaaaatagcaaagaggtcttataaaaagggac 28052235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 37951885 - 37951940
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  37951885 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 37951940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 52429005 - 52428934
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||||||||| |||||  | ||| |||||||||||    
T  52429005 taaataagggtatgttggtaaagaaataattaatgtacttgaaaataccaaaagagccttataaaaagggac 52428934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 1048188 - 1048242
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaaggga 261  Q
    |||||||||| |||||||||| ||| ||||| ||||  |||||||||||||||||    
T  1048188 tgtaaagaaataattaatgtagttggaaataacaaaggggtcttttaaaaaggga 1048242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 15616249 - 15616179
Alignment:
Q  192 aaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||||  | |||||||||| |||||||||| ||||||||| |||| || |||| |||||| ||||    
T  15616249 aaataggggtatgtatgtaaagaaataattaatgtagttgaaaatagcaaattgatcttataaaaatggac 15616179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 46271287 - 46271341
Alignment:
Q  208 gtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    ||||||||| |||||||||||||| ||||| ||||||  |||| |||||||||||    
T  46271287 gtaaagaaataattaatgtacttggaaataccaaaatcatcttataaaaagggac 46271341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 3549131 - 3549078
Alignment:
Q  209 taaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||| |||||||||| ||| ||||| |||| ||||||| |||||||||||    
T  3549131 taaagaaataattaatgtagttggaaatagcaaagtggtcttataaaaagggac 3549078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 14171795 - 14171828
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtat 311  Q
    |||||||||||||||| |||||||||||||||||    
T  14171795 aaaagggtcctataattagggacggagggagtat 14171828  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 35693330 - 35693371
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtatttgttaag 319  Q
    |||||||||||||||| ||||||||||| |||||||| ||||    
T  35693330 aaaagggtcctataattagggacggaggtagtatttggtaag 35693371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 5251 - 5196
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||||||||||| |||||||||||    
T  5251 tgtaaagaaataattaatgtagttggaaatagcaaaatggtcttataaaaagggac 5196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 10119 - 10174
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||||||||||| |||||||||||    
T  10119 tgtaaagaaataattaatgtagttggaaatagcaaaatggtcttataaaaagggac 10174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 18597 - 18542
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||||||||||| |||||||||||    
T  18597 tgtaaagaaataattaatgtagttggaaatagcaaaatggtcttataaaaagggac 18542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Complemental strand, 17581 - 17510
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||| |||||  || ||||||||| |||||||||||||| ||||| ||||| |||||| |||||||||||    
T  17581 taaataagggtatgttggtaaagaaataattaatgtacttggaaataccaaaagggtcttataaaaagggac 17510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 355221 - 355292
Alignment:
Q  191 taaataggggtaattttgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| || | |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  355221 taaataggggcaagtatgtaaagaaataattaatgtagttgaaaatagcaaaggggtcttataaaaagggac 355292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 12165 - 12110
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||| |||||||||||    
T  12165 tgtaaagaaataattaatgtagttgaaaataacaaaggggtcttataaaaagggac 12110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 164315 - 164260
Alignment:
Q  207 tgtaaagaaaaaattaatgtacttgaaaatatcaaaatggtcttttaaaaagggac 262  Q
    |||||||||| |||||||||| ||| ||||| |||| ||||||| |||||||||||    
T  164315 tgtaaagaaataattaatgtagttggaaatagcaaagtggtcttataaaaagggac 164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 259127 - 259166
Alignment:
Q  278 aaaagggtcctataataagggacggagggagtatttgtta 317  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  259127 aaaagggtcttataattagggacggagggagtatttgtta 259166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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