View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15674_high_5 (Length: 361)
Name: NF15674_high_5
Description: NF15674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15674_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 13 - 347
Target Start/End: Original strand, 40969127 - 40969461
Alignment:
| Q |
13 |
aatataatggttagcagtgacaaagaaattaacagtaacagaatgaattaatatgtatcagaagtcatgttaccagaaaattccttgaaatatattagct |
112 |
Q |
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| T |
40969127 |
aatataatggttagcagtgacaaagaaattaacagtaacagaatgaattaatatgtatcagaagtcatgttaccagaaaattccttgaaatatattagct |
40969226 |
T |
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| Q |
113 |
accgtgaatgcagactgtgtaaacacgacaataagtatcatatgtgtccatgcatactggccaaattgatatttgtagtatctcttctttaatgaaagaa |
212 |
Q |
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| T |
40969227 |
accgtgaatgcagactgtgtaaacacgacaataagtatcatatgtgtccatgcatactggccaaattgatatttgtagtatctcttctttaatgaaagaa |
40969326 |
T |
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| Q |
213 |
taaaccatacaaaacctgaaaccatacataaaaagatttactcataaatgaatttattatactatagggaaaaacctgaaatcatacaagtaaaacacat |
312 |
Q |
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| T |
40969327 |
taaaccatacaaaacctgaaaccatacatgaaaagatttactcagaaatgaatttattatactatagggaaaaacctgaaatcatacaagtaaaacacat |
40969426 |
T |
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| Q |
313 |
ttactagtactaacctgcaatatataagaagtaac |
347 |
Q |
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| T |
40969427 |
ttactagtactaacctgcaatatataagaagtaac |
40969461 |
T |
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