View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15674_high_7 (Length: 301)
Name: NF15674_high_7
Description: NF15674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15674_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 36986130 - 36986330
Alignment:
| Q |
1 |
taatactgattgaataataacaaacaaccgtgtctataagaaaaaacagagatataaaaagtaatgaaaacaaatttgtatgacctaaatctatgatcaa |
100 |
Q |
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| T |
36986130 |
taatactgattgaataataacaaacaaccgtgtctataagaaaaaacagagatataaaaagtaatgaaaacaaatttgtatgacctaaatctatgatcaa |
36986229 |
T |
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| Q |
101 |
atagtaacctatgtttcatgatacttctcgttgaaatctctcacttcaagttcaactgctgtgtcaaagaaaaaattaattgatacatagtctctcaatg |
200 |
Q |
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| T |
36986230 |
atagtaacctatgtttcatgatacttctcgttgaaatctctcacttcaagttcaactgctgtgtcaaagaaaaaattaattgatacatagtctctcaatg |
36986329 |
T |
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| Q |
201 |
t |
201 |
Q |
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| T |
36986330 |
t |
36986330 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 36986381 - 36986465
Alignment:
| Q |
198 |
atgtcacttaatatttatactttcatacgagtgaccaccacaaaaaataaataggattgacaccaactaccacttaccaatatca |
282 |
Q |
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||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36986381 |
atgtcacttaatatttatactttcataagagagaccaccacaaaaaataaataggattgacaccaactaccacttaccaatatca |
36986465 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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