View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15675_low_3 (Length: 393)
Name: NF15675_low_3
Description: NF15675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15675_low_3 |
 | |
|
| [»] scaffold0186 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 147 - 375
Target Start/End: Original strand, 32120311 - 32120540
Alignment:
| Q |
147 |
ctccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcga |
245 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| |
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|
| T |
32120311 |
ctccttataatgaaaggaatgctccccaaaagtatccagacacaccttacgacaaatagggcacacctgatcaataggaaatattggaatcataaggcga |
32120410 |
T |
|
| Q |
246 |
tatataaagattgtatggcactccattggtaacatttgctgaactaaccatcaatcgagataacaagaagaaaatcatgagcatgtcgtacttgcaaaca |
345 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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|
| T |
32120411 |
tatataaagattgtatggcactccattggtaacatttgctgaactaaccatcaatcgagataacaagaagaaaatcatgagcatgtcctacttgcaaaca |
32120510 |
T |
|
| Q |
346 |
tcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||| ||||||||||||||| |||||||| |
|
|
| T |
32120511 |
tcctataattgtcttctgtcttgtggtcat |
32120540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32120184 - 32120302
Alignment:
| Q |
1 |
ataaagaacttttcatgctatcactatctattttgaatttcagcaacatcaaatgacaattttgataagtttcaaggctttacagaaataatcatttctt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
32120184 |
ataaagaacttttcatgctatcactatctattttgaatttcaacaacatcaaatgacaattttgataagtttcaaggctttacagaaataatcatttctt |
32120283 |
T |
|
| Q |
101 |
ctcagatttaattgataaa |
119 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
32120284 |
ctcagatttaatttataaa |
32120302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 117 - 302
Target Start/End: Complemental strand, 4206351 - 4206164
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| | |||| || |||||||| |||||||||||| ||| |||||||||||||||||||| ||| | |
|
|
| T |
4206351 |
aaagtcatgtatgtacttaaagctcggaaactccttacagtgaacggcatgctccccaaaagtatccaggcacgccttacgacaaacagggcacgcctca |
4206252 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcg |
302 |
Q |
| |
|
||||||||||||||||||||| |||||||| || ||| ||| ||| || |||||| |||| |||| |||||| |||| |||||||||| |
|
|
| T |
4206251 |
tcaataggaaatagtggaatcgtaaggcgagatctaaggatagtacggtactccactggtgacatatgctgacctaacccatcaatcg |
4206164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 32119596 - 32119702
Alignment:
| Q |
3 |
aaagaacttttcatgctatcactatctattttgaatttcagcaacatcaaatgacaattttgataagtttcaaggctttacagaaataatcatttcttct |
102 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |
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|
| T |
32119596 |
aaagaacttttcatgatatcactatctattttgaatgtcgacaacatcaaatgactattttgataattttcaaggcaatacagaaataatcatttcttct |
32119695 |
T |
|
| Q |
103 |
cagattt |
109 |
Q |
| |
|
||||||| |
|
|
| T |
32119696 |
cagattt |
32119702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 32116041 - 32116166
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||||||||||||||| | |||| ||||| | ||||| | |||||||| |||||||||||| |||||||||||||||||||||||||| | | |
|
|
| T |
32116041 |
aaagtcatgtatgtacttaaagttgggaagctcctcacaatgagcgacatgctccccaaaagtatccaggcacaccttacgacaaacagggcacacatca |
32116140 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataag |
241 |
Q |
| |
|
||||||||||||||| |||||||||| |
|
|
| T |
32116141 |
tcaataggaaatagttgaatcataag |
32116166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 117 - 307
Target Start/End: Complemental strand, 45424 - 45232
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||||||||||||||| | ||| ||||||| | ||| | |||||||| ||||||||| || |||||||||||||||||||||||||||| | |
|
|
| T |
45424 |
aaagtcatgtatgtacttaaacccgagaagctccttacaccgaacgacatgctccccaaaagtatcaaggcacaccttacgacaaacagggcacacctca |
45325 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagata |
307 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| ||| ||| ||||| |||||| | | |||| |||||| |||| |||||||||| |||| |
|
|
| T |
45324 |
tcaataggaaatattggaatcataaggtgatatctaaggatagtatgatactccacagatgacatatgctgacctaacccatcaatcgggata |
45232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 32117338 - 32117436
Alignment:
| Q |
7 |
aacttttcatgctatcactatctattttgaatttcagcaacatcaaatgacaattttgataagtttcaaggctttacagaaataatcatttcttctcaga |
106 |
Q |
| |
|
||||||||||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| |
|
|
| T |
32117338 |
aacttttcatgatataactatatattttgaatttcaacaacatcaaatgacaattttgataatt----aggcattacagaaataatcatttcttctcaga |
32117433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 32121659 - 32121750
Alignment:
| Q |
14 |
catgctatcactatctattttgaatttcagcaacatcaaatgacaattttga---taagtttcaaggctttacagaaataatcatttcttct |
102 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||| || |||||| ||||||||||| ||||||||||| |
|
|
| T |
32121659 |
catgctttcactatctattttgaatttcaacaacattaaatgacaattttgatagtaatttgcaaggcattacagaaatattcatttcttct |
32121750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 345
Target Start/End: Complemental strand, 29337841 - 29337611
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctcccaa-aagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||| |||| ||||||||||||| |||| || |||| |||||| |||||||| | |||||||||| || |||||||| ||||| ||||| ||| | |
|
|
| T |
29337841 |
aaagttatgtgtgtacttaaagctaggaagctacttacaatgaactacatgctccccacaagtatccaggcatgccttacgagaaacatggcacgcctca |
29337742 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
| ||||| |||||| |||||||||||||||||| ||| ||| |||| ||| || | | | || |||||| |||| ||||||||| |||| | |||| |
|
|
| T |
29337741 |
ttaatagaaaatagaggaatcataaggcgatatctaaggataatatgatacttcacttgcgaaatatgctgacctaacccatcaatcaggatagctagaa |
29337642 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaaca |
345 |
Q |
| |
|
||||||| ||||||||| | |||||||||| |
|
|
| T |
29337641 |
gaaaatcctgagcatgtgctgcttgcaaaca |
29337611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 117 - 348
Target Start/End: Original strand, 34304849 - 34305082
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgct-cccaaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||||||| | |||| ||||| |||||||||||||||||| |||||||||| |||||| |||| | |
|
|
| T |
34304849 |
aaagtcatgcatgtacttaaagccgagaagctccttacagtgaacaacatgctccccaaaagtatccagacatgtcttacgacaagtagggcaaacctca |
34304948 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
|||||| |||||| |||||||||||| | ||| || ||| ||| || |||||| |||| |||| |||||| ||| |||||||| | |||| | |||| |
|
|
| T |
34304949 |
tcaatatgaaataatggaatcataagacagtatcgaaggatagtacggtactccactggtgacatatgctgacataacccatcaattgggatacctagaa |
34305048 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcc |
348 |
Q |
| |
|
|||||| ||||||||| | ||| ||||||||| |
|
|
| T |
34305049 |
taaaatcttgagcatgtgctgcttccaaacatcc |
34305082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 32112896 - 32112946
Alignment:
| Q |
11 |
tttcatgctatcactatctattttgaatttcagcaacatcaaatgacaattt |
62 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
32112896 |
tttcatgctatcactatctattttgaatttcaac-acatcaaatgacaattt |
32112946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 12401732 - 12401803
Alignment:
| Q |
170 |
cccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataag |
241 |
Q |
| |
|
||||||||||| | | || ||||||| ||||||||||||| || |||||||| |||||||| ||||||||| |
|
|
| T |
12401732 |
cccaaaagtattctaatacgccttacggcaaacagggcacaactcatcaatagaaaatagtgtaatcataag |
12401803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 357418 - 357369
Alignment:
| Q |
170 |
cccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaa |
219 |
Q |
| |
|
||||||||||||||||||| ||||||| |||| ||| ||||||| ||||| |
|
|
| T |
357418 |
cccaaaagtatccagacacgccttacgtcaaaaaggacacacctcatcaa |
357369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 101; Significance: 6e-50; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 117 - 375
Target Start/End: Complemental strand, 9685170 - 9684910
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgct-cccaaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||||||| |||||| | ||| ||||||||||||||||||| |||||||||||||||||||| ||| | |
|
|
| T |
9685170 |
aaagtcatgtctgtacttaaagccgggaagctccttacaatgaacgacgcgctccccaaaagtatccagacacgccttacgacaaacagggcacgcctca |
9685071 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||| ||| ||| | |||||| |||| |||| |||||| |||| |||||||| | |||| | |||| |
|
|
| T |
9685070 |
tcaataggaaatagtggaatcgtaaggcgatatctaaggatagtacgatactccactggtgacatatgctgacctaacccatcaatagggatagctagaa |
9684971 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||| |||| |||| | ||||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
9684970 |
gaaaatcttgagtatgtgctgcttgcaaacatccaaaaattgccttctgtctcgtggtcat |
9684910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 117 - 348
Target Start/End: Complemental strand, 20142495 - 20142262
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| |||||||||||| ||||| ||||||| |||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
20142495 |
aaagtcatgtctgtacttaaagcctggaagctccttacaatgaacgacatgctccccaaaagtatccagacacgccttacgacaaacagggcacacctca |
20142396 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||| ||| ||| |||||| || | |||| |||||| ||| |||||||||| |||| | |||| |
|
|
| T |
20142395 |
tcattaggaaatagtggaatcataaggcgatatctaaggatagtacaatactccactgttgacatatgctgacttaacccatcaatcgggatagctagaa |
20142296 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcc |
348 |
Q |
| |
|
||||||| ||||||||| | ||||||||||||| |
|
|
| T |
20142295 |
gaaaatcctgagcatgtgctgcttgcaaacatcc |
20142262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 117 - 375
Target Start/End: Original strand, 17344990 - 17345250
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||| ||| |||||||||||| |||| |||||| |||||| | |||||||| |||||||||||| ||| |||||||||||||||||||||||| | |
|
|
| T |
17344990 |
aaagtcgtgtctgtacttaaagccaggaagttccttacaatgaacgacatgctccccaaaagtatccaggcacgccttacgacaaacagggcacacctca |
17345089 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||| ||| ||| | |||||| | || |||| ||| || |||| |||||||| | |||| | |||| |
|
|
| T |
17345090 |
tcaataggaaatagtggattcataaggcgatatctaaggatagtacgatactccactagtgacatatgccgacctaacccatcaattgggatagctagaa |
17345189 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||| ||||||||| || ||||||||||||| | ||||||||| ||||| |||||||| |
|
|
| T |
17345190 |
gaaaatcttgagcatgtggttcttgcaaacatccaaaaattgtcttttgtctggtggtcat |
17345250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 117 - 375
Target Start/End: Complemental strand, 41867663 - 41867403
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||| || |||||||||||| |||| ||||||| |||||| || |||||||| |||||||||||||||| |||||||||||||| |||||||| | |
|
|
| T |
41867663 |
aaagtcacgtctgtacttaaagccgggaagctccttacaatgaatggcatgctccccaaaagtatccagacacgacttacgacaaacagagcacacctca |
41867564 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||| ||| ||| | |||||| |||| |||| |||||| |||| |||||||||| |||| | |||| |
|
|
| T |
41867563 |
tcaataggaaatagtggaatcataagacgatatctaaggatagtacgatactccactggtgacatatgctgacctaacccatcaatcgggatagctagaa |
41867464 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
|||||| ||||||||| | ||||||||||| | | ||| | |||||| | ||||||||| |
|
|
| T |
41867463 |
gaaaattctgagcatgtgctgcttgcaaacattcaaaaatcgccttctgccccgtggtcat |
41867403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 127 - 348
Target Start/End: Original strand, 44686780 - 44687002
Alignment:
| Q |
127 |
atgtacttaaagcttggaaactccttataatgaaaggaatgctcccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaa |
226 |
Q |
| |
|
||||||||||||| |||| ||||||| |||||| | ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| | |
|
|
| T |
44686780 |
atgtacttaaagccgggaagctccttacaatgaatgacatgctcccaaaagtatccagacacatcttacgacaaacaggacacacctcatcaataggaca |
44686879 |
T |
|
| Q |
227 |
tagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaagaaaatcatga |
325 |
Q |
| |
|
||||||||||||||| |||||| || ||| ||| | ||||||||||| |||| | |||| |||| |||||||| |||||| | ||||||||||| | | |
|
|
| T |
44686880 |
tagtggaatcataagacgatatcgaaggatagtacgatactccattggtgacatatactgacctaacccatcaattgagatagctagaagaaaatcttaa |
44686979 |
T |
|
| Q |
326 |
gcatgtcgtacttgcaaacatcc |
348 |
Q |
| |
|
|||||| | ||||||||||||| |
|
|
| T |
44686980 |
gcatgtgctgcttgcaaacatcc |
44687002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 117 - 331
Target Start/End: Complemental strand, 4412821 - 4412605
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| || ||||||||| | || ||||||| |||||| | |||||||| |||||||||||||||| ||||||||| |||| ||||||||| | |
|
|
| T |
4412821 |
aaagtcatgtctgcacttaaagccggaaagctccttacaatgaacgacatgctccccaaaagtatccagacacgccttacgaccaacaaggcacacctca |
4412722 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaac-catcaatcgagataacaagaa |
314 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||| ||| ||| | |||||| |||| |||| |||||| ||||| ||||||||| |||| | |||| |
|
|
| T |
4412721 |
tcaataggaaatagtggaatcataagacgatatctaaggatagtacgatactccactggtgacatatgctgacctaactcatcaatcgggatagctagaa |
4412622 |
T |
|
| Q |
315 |
gaaaatcatgagcatgt |
331 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
4412621 |
gaaaatcctgagcatgt |
4412605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 142 - 375
Target Start/End: Complemental strand, 19161555 - 19161321
Alignment:
| Q |
142 |
ggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataa |
240 |
Q |
| |
|
|||| ||||||| |||||| | |||||||| |||||||||||| | | ||||||||||||||| ||| |||| || ||||||||||||| |||||||| |
|
|
| T |
19161555 |
ggaagctccttacaatgaacgacatgctccccaaaagtatccaggcgcgccttacgacaaacagagca-acctcattgataggaaatagtgcaatcataa |
19161457 |
T |
|
| Q |
241 |
ggcgatatataaagattgtatggcactccattggtaacatttgctgaactaacc-atcaatcgagataacaagaagaaaatcatgagcatgtcgtacttg |
339 |
Q |
| |
|
| |||||| ||| ||| ||| | |||||| || | |||| |||||| |||||| ||||||| |||| | ||||||||||| ||||||| | | |||| |
|
|
| T |
19161456 |
gacgatatctaatgatagtacgatactccactgatgacatatgctgacctaacctatcaatcaggatagctagaagaaaatcctgagcatatattgcttg |
19161357 |
T |
|
| Q |
340 |
caaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||||||| | ||||||||||||||||| |||| |
|
|
| T |
19161356 |
caaacatcctaaagttgtcttctgtctcgtgatcat |
19161321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 348
Target Start/End: Original strand, 28225352 - 28225584
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| |||||||||||| | |||||||||| |||||| || |||||||| ||||||||| |||||| ||||||||||||| ||||||||| | |
|
|
| T |
28225352 |
aaagtcatgcctgtacttaaagccggaaaactccttacaatgaacggcatgctccccaaaagtatctagacacgtcttacgacaaacatggcacacctca |
28225451 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||| | ||||| |||||||||||| ||||| | ||| ||| || ||||| |||| |||| |||||| |||| |||||||| | |||| | |||| |
|
|
| T |
28225452 |
tcaatggaaaataatggaatcataagatgatatcgacggatagtacggtactccgctggtgacatatgctgatctaacccatcaattg-gatagctagaa |
28225550 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcc |
348 |
Q |
| |
|
||||||| ||||||||| | ||||||||||||| |
|
|
| T |
28225551 |
gaaaatcttgagcatgtgcttcttgcaaacatcc |
28225584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 33612296 - 33612164
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| ||||| | |||||||| |||||||||||||||||| |||||||||||| | ||||||| | |
|
|
| T |
33612296 |
aaagtcatgtatgtacttaaaatctggaagctccttacaatgagttgtatgctccccaaaagtatccagacacactttacgacaaacatgacacacctca |
33612197 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||||| |
|
|
| T |
33612196 |
tcaatatgaaatagtgaaatcataaggtgatat |
33612164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 239 - 375
Target Start/End: Complemental strand, 18744650 - 18744513
Alignment:
| Q |
239 |
aaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaacc-atcaatcgagataacaagaagaaaatcatgagcatgtcgtact |
337 |
Q |
| |
|
|||||||||| ||| ||| ||| | |||||| |||| |||| |||| | |||||| |||||||| |||| | |||||||| || ||||||| | || || |
|
|
| T |
18744650 |
aaggcgatatctaaggatagtacgatactccactggtgacatatgctaacctaacccatcaatcgggatagctagaagaaattcttgagcatttggtgct |
18744551 |
T |
|
| Q |
338 |
tgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
18744550 |
tgcaaacatccaaaaattgccttctgtctcgtggtcat |
18744513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 223
Target Start/End: Original strand, 5532784 - 5532885
Alignment:
| Q |
123 |
atgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaatcaata |
221 |
Q |
| |
|
|||| |||||||||||| ||| ||||||| |||||| | |||||||| |||||||| ||| ||| ||||| ||||||||||||||||| |||||| |
|
|
| T |
5532784 |
atgtttgtacttaaagccatgaagctccttacaatgaactgcatgctccccaaaagtattcaggcacgtcttacaacaaacagggcacaccttttcaata |
5532883 |
T |
|
| Q |
222 |
gg |
223 |
Q |
| |
|
|| |
|
|
| T |
5532884 |
gg |
5532885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 101; Significance: 6e-50; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 117 - 375
Target Start/End: Complemental strand, 28040882 - 28040622
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||||||||||||||| | |||||||| ||| |||||| | |||||||| |||||||| ||| ||||| ||||| ||||||||||||||| | |
|
|
| T |
28040882 |
aaagtcatgtatgtacttaaatccgggaaactcattacaatgaacgacatgctccctaaaagtattcagtcacacattacggcaaacagggcacaccaca |
28040783 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaacc-atcaatcgagataacaagaa |
314 |
Q |
| |
|
||| ||||||||| ||||||||||||||||||| ||| ||| ||||| |||||| |||| |||| || ||| |||||| |||||||| |||| | |||| |
|
|
| T |
28040782 |
tcattaggaaataatggaatcataaggcgatatctaaggatagtatgatactccactggtgacatatgttgacctaaccaatcaatcgggatagctagaa |
28040683 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||| ||||||||| | ||||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
28040682 |
gaaaatcttgagcatgttctgcttgcaaacatccaaaaattgccttctgtctcgtggtcat |
28040622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 117 - 360
Target Start/End: Original strand, 37200607 - 37200852
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||||||| |||||||| | || ||||||| ||||||| ||||| |||| ||||||||||| ||| ||||| |||| ||||||||||| | |
|
|
| T |
37200607 |
aaagtcatgtatgaacttaaaggcagaaagctccttacaatgaaatgaatgatccccaaaagtatccaagcacgtcttacaacaagtagggcacacctca |
37200706 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||| ||| ||||| |||||| | || |||| |||||| |||| ||||| || |||| | || |
|
|
| T |
37200707 |
tcaataggaaatagtggaattataaggcgatatctaaggatagtatgatactccactagtgacatatgctgacctaacccatccatatggatagttaaaa |
37200806 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtctt |
360 |
Q |
| |
|
|||||| |||||||||| |||||||||||| | || ||||||||| |
|
|
| T |
37200807 |
gaaaatgatgagcatgtgctacttgcaaacaccttaaaattgtctt |
37200852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 375
Target Start/End: Original strand, 19035868 - 19036039
Alignment:
| Q |
205 |
ggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaac-catcaatcga |
303 |
Q |
| |
|
||||||||| ||||| |||| ||||||||||||||||||||||| ||| ||| ||||| |||||| |||| |||| || ||| ||||| ||||||||| |
|
|
| T |
19035868 |
ggcacacctcatcaaaaggatatagtggaatcataaggcgatatctaaggatagtatgatactccactggtgacatatgttgacctaactcatcaatcgg |
19035967 |
T |
|
| Q |
304 |
gataacaagaagaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
|||| | ||||||||||| |||||||| | |||||| |||||| | ||||| ||| |||||||||||||| |
|
|
| T |
19035968 |
gatagctagaagaaaatcccgagcatgtgctgcttgcagacatccaaaaattgccttttgtctcgtggtcat |
19036039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 248
Target Start/End: Original strand, 34644916 - 34645050
Alignment:
| Q |
115 |
ataaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctc-ccaaaagtatccagacacaccttacgacaaacagggcacacct |
213 |
Q |
| |
|
||||||||||| ||||||||||| |||| ||| ||| |||||| | |||||| |||||||||||||||||| ||||| |||||||||||||| ||| |
|
|
| T |
34644916 |
ataaagtcatgcctgtacttaaagtcgggaagctctttacaatgaacgacatgctcgccaaaagtatccagacacgccttatgacaaacagggcactcct |
34645015 |
T |
|
| Q |
214 |
aatcaataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
|||| ||| |||||||||||||||||| |||||| |
|
|
| T |
34645016 |
catcactagaaaatagtggaatcataagacgatat |
34645050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 375
Target Start/End: Original strand, 38731935 - 38732195
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctcc-caaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||| | |||||||||||| ||| ||||||| |||||| | ||||| | ||||||||||||| |||||||||||| ||||| || || | | |
|
|
| T |
38731935 |
aaagtcatatttgtacttaaagccaagaagctccttacaatgaactgtatgcttcacaaaagtatccaggcacaccttacgaaaaacaaaacatacatca |
38732034 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctga-actaaccatcaatcgagataacaagaa |
314 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||| ||| ||| || |||||| || | |||| |||||| || | ||||| ||| |||| | | || |
|
|
| T |
38732035 |
tcaacaggaaatagtggaatcataaggcgatatctaaggatagtacggtactccactgatgacatatgctgacacaacccatccatcaggatagctacaa |
38732134 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
|||||||||||| || | | ||| ||||||||||| || || ||||||||| ||| |||| |
|
|
| T |
38732135 |
gaaaatcatgagaatttgttgctttcaaacatcctaaaagtgacttctgtctagtgatcat |
38732195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 7794613 - 7794454
Alignment:
| Q |
173 |
aaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccatt |
272 |
Q |
| |
|
|||||||||||||||| |||||||||||||| || ||||| ||||||| |||||| ||||||||||||||||||| || ||| | |||| |||||| | |
|
|
| T |
7794613 |
aaaagtatccagacacgccttacgacaaacaaggtgcaccttatcaatatgaaataatggaatcataaggcgatatcaaaggatagcatggtactccact |
7794514 |
T |
|
| Q |
273 |
ggtaacatttgctgaactaa-ccatcaatcgagataacaagaagaaaatcatgagcatgt |
331 |
Q |
| |
|
||| | || || ||| |||| |||||||| |||| | | ||||||||||||||||||| |
|
|
| T |
7794513 |
ggtgatatatgttgacctaacccatcaataaggatagctataagaaaatcatgagcatgt |
7794454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 35387070 - 35386939
Alignment:
| Q |
118 |
aagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctcccaa-aagtatccagacacaccttacgacaaacagggcacacctaat |
216 |
Q |
| |
|
||||||| ||||||||||||| | |||| ||||||| || ||| | ||||||| || || |||||| |||||||||||||||||||| || ||| || |
|
|
| T |
35387070 |
aagtcatctatgtacttaaagttaggaagctccttacaacgaactgcatgctcctaacaaatatccaagcacaccttacgacaaacaggacatgcctcat |
35386971 |
T |
|
| Q |
217 |
caataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
||||| |||||||| ||| ||||| |||||| |
|
|
| T |
35386970 |
caataaaaaatagtgaaattataagtcgatat |
35386939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 22347288 - 22347340
Alignment:
| Q |
175 |
aagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaat |
227 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
22347288 |
aagtatccaggcatgccttacgacaaacagggcacacctcatcaatagaaaat |
22347340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 22375097 - 22375203
Alignment:
| Q |
143 |
gaaactccttataatgaaaggaatgctcccaaaag-tatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataag |
241 |
Q |
| |
|
||||||||||| |||||| | | |||||||||| ||| ||| ||| ||||| | |||||| || | |||| |||| ||||||||||| |||||||||| |
|
|
| T |
22375097 |
gaaactccttaaaatgaactgtaggctcccaaaaactatacaggcacgccttaagccaaacatggaaaacctcatcagtaggaaatagtagaatcataag |
22375196 |
T |
|
| Q |
242 |
gcgatat |
248 |
Q |
| |
|
||||||| |
|
|
| T |
22375197 |
gcgatat |
22375203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 117 - 375
Target Start/End: Original strand, 24125380 - 24125639
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||| |||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
24125380 |
aaagtcatgtttgtacttaaagtcgggaagctccttaaaatgaacggcatgctccccaaaagtatccagacacgccttacgacaaacagggcacacctca |
24125479 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||| ||| ||| || |||||| | || |||| | |||| |||| |||||||||| |||| | |||| |
|
|
| T |
24125480 |
tcaataggaaatagtggaatcataatgcgatatttaaggatagtacggtactccact-gtgacatatcctgacctaacccatcaatcgggatagctagaa |
24125578 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||| ||||||||| | ||||||||||| ||| |||| || || |||||| ||||| |
|
|
| T |
24125579 |
gaaaatcctgagcatgtgatgcttgcaaacattctaatattgcctcctatctcgttgtcat |
24125639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 117 - 375
Target Start/End: Original strand, 37517441 - 37517701
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctcccaa-aagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||| |||||| || |||||||| | ||| ||||| |||| ||||||| ||||||||||||||| | |
|
|
| T |
37517441 |
aaagtcatgtctgtacttaaagtcgggaagctccttacaatgaacggcatgctccccagaagaatccacacacgtcttacgataaacagggcacacctca |
37517540 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||| |||| |||||| |||| |||| || ||| |||| |||||||||| |||| |||| |
|
|
| T |
37517541 |
tcaataggaaatagtggaatcataaggcgatatctaaggatattatgatactccactggtgacatatgttgacctaacccatcaatcgggatacttagaa |
37517640 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||||||||||||| | ||||||||||||| | |||| |||||| |||||||||||| |
|
|
| T |
37517641 |
gaaaatcatgagcatgtgctgcttgcaaacatccaaaaattatcttctatctcgtggtcat |
37517701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 117 - 331
Target Start/End: Original strand, 39435019 - 39435235
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| |||||||||||| |||| || ||| |||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
39435019 |
aaagtcatgcctgtacttaaagccgggaagttctttacaatgaacggcatgctccccaaaagtatccagacacgccttacgacaaacagggcacacctca |
39435118 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| || ||| ||| || |||| | | || |||| |||||| |||| |||||||| | |||| | |||| |
|
|
| T |
39435119 |
tcaataggaaaaagtggaatcataagacgatatcgaaggatagtacggtactcaactagtgacatatgctgacctaacccatcaattgggatagctagaa |
39435218 |
T |
|
| Q |
315 |
gaaaatcatgagcatgt |
331 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
39435219 |
gaaaatcttgagcatgt |
39435235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 121 - 362
Target Start/End: Original strand, 500583 - 500826
Alignment:
| Q |
121 |
tcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaatcaa |
219 |
Q |
| |
|
||||| |||||||||||| ||| ||||||| |||||| | |||||||| ||||||||| || || |||||| ||||||||| ||||||| ||||| |
|
|
| T |
500583 |
tcatgcatgtacttaaagtcgggatgctccttacaatgaacgacatgctccccaaaagtatctaggcatgccttacaacaaacaggtcacacctcatcaa |
500682 |
T |
|
| Q |
220 |
taggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaac-catcaatcgagataacaagaagaaa |
318 |
Q |
| |
|
||||||||| ||||||| |||||| |||| ||| ||| ||| || ||||||||||| |||| |||||| ||||| |||||||| ||| | |||||||| |
|
|
| T |
500683 |
taggaaatattggaatcgtaaggcaatatctaaggatagtacggtactccattggtgacatatgctgacctaactcatcaatcaggattgctagaagaaa |
500782 |
T |
|
| Q |
319 |
atcatgagcatgtcgtacttgcaaacatcctacaattgtcttct |
362 |
Q |
| |
|
||||||||||| | | |||||||| |||||| ||||||||||| |
|
|
| T |
500783 |
atcatgagcatatgctgcttgcaaatatcctaaaattgtcttct |
500826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 25021506 - 25021427
Alignment:
| Q |
169 |
tcccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
||||||||||||| || ||| |||||||| ||| | ||||||||| ||||||| |||||||||||||||| ||||||||| |
|
|
| T |
25021506 |
tcccaaaagtatcaaggcacgccttacgataaatatggcacacctcatcaatatgaaatagtggaatcatgaggcgatat |
25021427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 43134353 - 43134440
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgct-cccaaaagtatccagacacaccttacgacaaaca |
203 |
Q |
| |
|
|||||||||| |||||||||| | ||||||||||||||||||| |||| | ||||||||| | ||||||| |||||||||||||| |
|
|
| T |
43134353 |
aaagtcatgtttgtacttaaaattgggaaactccttataatgaatttaatgttccccaaaagttttcagacacgccttacgacaaaca |
43134440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 10189895 - 10190020
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| |||||||||||| ||| ||||||| |||||| | ||||||| |||||||||||| ||||||||||| ||||| ||| || | | |
|
|
| T |
10189895 |
aaagtcatgtttgtacttaaagccgtgaagctccttacaatgaactgcatgctccttaaaagtatccaggcacaccttacggcaaacggggtgcatgtca |
10189994 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataag |
241 |
Q |
| |
|
|||||| |||||| | |||||||||| |
|
|
| T |
10189995 |
tcaatatgaaataatagaatcataag |
10190020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 42921881 - 42921753
Alignment:
| Q |
118 |
aagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctc-ccaaaagtatccagacacaccttacgacaaacagggcacacctaat |
216 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||| |||||| |||||| |||||| ||| || ||| |||||||||||| ||| ||||| || |
|
|
| T |
42921881 |
aagtcatgtatgtacttaaagccaagaaacttcttacaatgaactacatgctctccaaaaatattca---acatcttacgacaaacgaggcgcacctcat |
42921785 |
T |
|
| Q |
217 |
caataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
||||| |||||| |||||||||||| |||||| |
|
|
| T |
42921784 |
caataagaaataatggaatcataagacgatat |
42921753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 89; Significance: 8e-43; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 117 - 375
Target Start/End: Complemental strand, 15291778 - 15291518
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||||||| |||||| |||||||| |||||||||||||||| |||||||| ||||| | ||||||| | |
|
|
| T |
15291778 |
aaagtcatgtttgtacttaaagccgggaagctccttacaatgaacaacatgctccccaaaagtatccagacacgccttacgataaacatgacacacctca |
15291679 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||| |||||||||||||||| | |||||| ||| ||| ||| | |||||| |||| |||| |||||| |||| |||||||| | |||| | |||| |
|
|
| T |
15291678 |
tcaatagaaaatagtggaatcatacgacgatatctaaggatagtacgatactccactggtgacatatgctgacctaacccatcaattgggatagctagaa |
15291579 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||| |||||||| | ||||||||||||| | ||||| |||||||||||||||||| |
|
|
| T |
15291578 |
gaaaatcccgagcatgtgctgcttgcaaacatcccaaaattgccttctgtctcgtggtcat |
15291518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 117 - 375
Target Start/End: Original strand, 27337045 - 27337305
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||| ||||||||||||||| |||| |||||| |||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
27337045 |
aaagtcaagtatgtacttaaagccgggaagttccttacaatgaacggcatgctccctaaaagtatccagacatgccttacgacaaacagggcacacctca |
27337144 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| || ||| ||| || |||| | |||| |||| |||| | |||| |||||||| | |||| | | || |
|
|
| T |
27337145 |
tcaataggaaaaagtggaatcataagacgatatcgaaggatagtacggtactcaactggtgacatatgctaacctaacccatcaattgggatagctaaaa |
27337244 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||| ||||||||| || |||||||||||| | || || ||||||||| |||||||| |
|
|
| T |
27337245 |
gaaaatcttgagcatgtggtggttgcaaacatcccaaaactgccttctgtctagtggtcat |
27337305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 117 - 376
Target Start/End: Original strand, 433644 - 433905
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| ||||||||||| | |||| ||||||| |||||| | |||||||| |||||||||||||||| ||||||||||||||| |||||||| | |
|
|
| T |
433644 |
aaagtcatgcctgtacttaaagttgggaagctccttacaatgaacgacatgctccccaaaagtatccagacacgccttacgacaaacagtgcacacctca |
433743 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| || ||| || | |||| |||||| |||| ||||| |||| |||||||| | |||| | |||| |
|
|
| T |
433744 |
tcaataggaaaaagtggaatcataagacgatatcgaaggatagtccgatactcaattggtgacatatgctggcctaacccatcaattgggatagctagaa |
433843 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcatt |
376 |
Q |
| |
|
||||||| ||||||||| || ||||||||||||||| || | |||||| || ||||||||| |
|
|
| T |
433844 |
gaaaatcttgagcatgtggtgcttgcaaacatcctaaaactaccttctgcctagtggtcatt |
433905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 3113920 - 3113789
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctcccaaaagtatccagacacaccttacgacaaacagggcacacctaat |
216 |
Q |
| |
|
|||||||||| |||||||||||| | || ||||||| |||||| | |||||||||||||||||||| || |||| |||||| ||||||||||| || |
|
|
| T |
3113920 |
aaagtcatgtttgtacttaaagccagaaagctccttacaatgaactgcatgctcccaaaagtatccaggtacgccttgtgacaaatagggcacacctcat |
3113821 |
T |
|
| Q |
217 |
caataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| |
|
|
| T |
3113820 |
caataggagatagtggaatcataaggcaatat |
3113789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 328
Target Start/End: Complemental strand, 25663007 - 25662859
Alignment:
| Q |
181 |
ccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacat |
280 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || ||| ||| || | |||| |||| |||| |
|
|
| T |
25663007 |
ccagacacgccttacgacaaacaaggcacacctcatcaataggaaatagtggaatcataagacgatatcgaaggatagtacggtattccactggtgacat |
25662908 |
T |
|
| Q |
281 |
ttgctgaactaa-ccatcaatcgagataacaagaagaaaatcatgagca |
328 |
Q |
| |
|
|||||| | || |||||||| | |||| | ||||||||||| |||||| |
|
|
| T |
25662907 |
atgctgacccaacccatcaattgggatagctagaagaaaatcttgagca |
25662859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 26212334 - 26212206
Alignment:
| Q |
121 |
tcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaatcaa |
219 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| ||| || | |||||||| |||||||||||| ||| |||||||||||||||| ||||| | ||||| |
|
|
| T |
26212334 |
tcatgtatgtacttaaagccgagaagctccttacaataaacgacatgctccccaaaagtatccaggcacgccttacgacaaacaggacacacttcatcaa |
26212235 |
T |
|
| Q |
220 |
taggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
||||||||| || |||||||| ||||||| |
|
|
| T |
26212234 |
taggaaataatgaaatcataaagcgatat |
26212206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 38446518 - 38446642
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| |||||||||||| | |||| ||||||| |||||| || | |||||| ||||||||| ||| || ||||||||||||| |||||||||| | |
|
|
| T |
38446518 |
aaagtcatgcatgtacttaaagttgggaagctccttacaatgaacggcacgctccctaaaagtatctagatacgccttacgacaaaccgggcacacctca |
38446617 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataa |
240 |
Q |
| |
|
||||| | ||||| ||||||||||| |
|
|
| T |
38446618 |
tcaatggaaaataatggaatcataa |
38446642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 13166665 - 13166542
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccca-aaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| |||| |||||||| || ||||||| |||||| | |||||||| ||||||||||||||| |||||| |||||||| |||||||| | |
|
|
| T |
13166665 |
aaagtcatgcttgtatttaaagctacaaagctccttacaatgaacgacatgctccccgaaagtatccagacacgccttacaacaaacagagcacacctca |
13166566 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcata |
239 |
Q |
| |
|
||||| ||||||||||||||||| |
|
|
| T |
13166565 |
tcaatcagaaatagtggaatcata |
13166542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 35310800 - 35310904
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgct-cccaaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| ||||||||||||| | || ||||||| |||||| || || ||||||||||| ||||||| |||||| ||||||||||||||||| | |
|
|
| T |
35310800 |
aaagtcatgtctgtacttaaagctggaaagctccttacaatgaacaacatactccccaaaagtattcagacacgccttacaacaaacagggcacacctca |
35310899 |
T |
|
| Q |
216 |
tcaat |
220 |
Q |
| |
|
||||| |
|
|
| T |
35310900 |
tcaat |
35310904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 6534261 - 6534196
Alignment:
| Q |
173 |
aaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcat |
238 |
Q |
| |
|
||||||||||||||| |||||||||||||| | ||||||| ||||||| |||||| | ||||||| |
|
|
| T |
6534261 |
aaaagtatccagacatgccttacgacaaacatgacacacctcatcaataagaaataatagaatcat |
6534196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 32269483 - 32269423
Alignment:
| Q |
181 |
ccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataag |
241 |
Q |
| |
|
||||||| | ||||||||| ||| | || |||| |||||||| |||||||||||||||||| |
|
|
| T |
32269483 |
ccagacatatcttacgacacacaagacatacctcatcaatagaaaatagtggaatcataag |
32269423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 89; Significance: 8e-43; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 117 - 375
Target Start/End: Original strand, 53786061 - 53786320
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||| ||| |||||||||||| |||| ||||||| |||||| | |||||||| |||||||||||| ||| |||||||||||||| || |||||| | |
|
|
| T |
53786061 |
aaagtcgtgtctgtacttaaagcc-ggaagctccttacaatgaacgacatgctccccaaaagtatccaggcacgccttacgacaaacaaggtacacctca |
53786159 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||| ||| || | |||||| |||| |||| |||||| |||| ||||||||| ||| | |||| |
|
|
| T |
53786160 |
tcaataggaaatagttgaatcataaggcgatatctaaggataatacgatactccactggtgacatatgctgacctaacccatcaatcagaatagctagaa |
53786259 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtcat |
375 |
Q |
| |
|
||||||| ||||||||| || ||||||||||||| | ||||| ||| |||||||||||||| |
|
|
| T |
53786260 |
gaaaatcttgagcatgtggtgcttgcaaacatccaaaaattgccttatgtctcgtggtcat |
53786320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 115 - 366
Target Start/End: Complemental strand, 52411659 - 52411406
Alignment:
| Q |
115 |
ataaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacct |
213 |
Q |
| |
|
|||||||||||| ||||||||||| ||| ||||||| |||||| | |||||||| |||||||| ||| ||| |||||||||||||||| ||||||| |
|
|
| T |
52411659 |
ataaagtcatgtcaatacttaaagctgagaagctccttacaatgaacgacatgctccccaaaagtattcaggcacgccttacgacaaacaggacacacct |
52411560 |
T |
|
| Q |
214 |
aatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaac-catcaatcgagataacaag |
312 |
Q |
| |
|
|||||||||||| | |||||||| |||||||||| ||| ||| | | | |||||| | || |||| |||||| |||| ||||||||| |||| | || |
|
|
| T |
52411559 |
tatcaataggaaacaatggaatcacaaggcgatatctaaggatagcacgatactccactcgtgacatatgctgacttaactcatcaatcgggatagctag |
52411460 |
T |
|
| Q |
313 |
aagaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtct |
366 |
Q |
| |
|
|||||||||||||||||| | | |||||||| |||| ||||||||| ||||| |
|
|
| T |
52411459 |
aagaaaatcatgagcatgcgctgcatgcaaacaccctaaaattgtcttttgtct |
52411406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 117 - 350
Target Start/End: Original strand, 29862149 - 29862385
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| |||||||||| || ||| ||||||| |||||| | |||||||| ||||||||| || ||| |||||||| ||| || | |||||| | |
|
|
| T |
29862149 |
aaagtcatgcctgtacttaaaactcagaagctccttacaatgaacgacatgctccccaaaagtatctaggcacgccttacgataaatagagaacacctca |
29862248 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaact--aaccatcaatcgagataacaaga |
313 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||| ||| ||| | ||| || |||| |||| |||||| | | ||||||||||||||| | ||| |
|
|
| T |
29862249 |
tcaataggaaataatggaatcataaggcgatatctaaggatagtacgctacttcactggtgacatatgctgactttaacccatcaatcgagatagctaga |
29862348 |
T |
|
| Q |
314 |
agaaaatcatgagcatgtcgtacttgcaaacatccta |
350 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||| |
|
|
| T |
29862349 |
agaaaatcatgagcatgtgttgtttgcaaacatccta |
29862385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 226 - 374
Target Start/End: Original strand, 49018414 - 49018563
Alignment:
| Q |
226 |
atagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaacc-atcaatcgagataacaagaagaaaatcatg |
324 |
Q |
| |
|
||||||||||||||||||||||| ||| ||| || | |||||| | || |||| ||||| |||||| ||||||| |||| | |||||||||||||| |
|
|
| T |
49018414 |
atagtggaatcataaggcgatatctaatgatagttcgatactccacttgtgacatgcgctgacctaacccatcaatcaggatagctagaagaaaatcatg |
49018513 |
T |
|
| Q |
325 |
agcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggtca |
374 |
Q |
| |
|
||||||| | ||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
49018514 |
agcatgtactgcttgcaaacatcctaaaattgtcttttgtctcgtggtca |
49018563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 366
Target Start/End: Original strand, 35236537 - 35236731
Alignment:
| Q |
173 |
aaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccatt |
272 |
Q |
| |
|
||||||||||||||||| |||||||| || | |||||||| |||||||||||||| | ||||||| ||||||| ||| ||| |||||| |||||| | |
|
|
| T |
35236537 |
aaaagtatccagacacatgttacgacagacggagcacacctcatcaataggaaataataacatcataaagcgatatctaaggatagtatggtactccact |
35236636 |
T |
|
| Q |
273 |
ggtaacatttgctgaactaa-ccatcaatcgagataacaagaagaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtct |
366 |
Q |
| |
|
||| |||| |||||| |||| ||||||| | || | | |||||||||| ||| ||| | ||||||||||||||| | || ||||||||||| |
|
|
| T |
35236637 |
ggtgacatatgctgacctaatccatcaaccaggacagcttgaagaaaatcttgatcatatactacttgcaaacatccaaaaaccgtcttctgtct |
35236731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 7501839 - 7501740
Alignment:
| Q |
170 |
cccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactcc |
269 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| ||||||| ||||||| ||||||| ||||| |||||||||||| ||| ||| ||| || ||||| |
|
|
| T |
7501839 |
cccaaaagtatccagacacgcattacgacaaacaaa-cacacctcatcaatatgaaatagaggaattataaggcgatatctaaggatagtacggtactcc |
7501741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 37992717 - 37992800
Alignment:
| Q |
165 |
atgctcccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
|||| |||||||||| ||||| || |||||||||||||| |||||||| |||||| || ||| || |||||||||||||||| |
|
|
| T |
37992717 |
atgcccccaaaagtacccagatacgtcttacgacaaacagagcacacctcatcaattagatatattgaaatcataaggcgatat |
37992800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 170 - 371
Target Start/End: Original strand, 5827660 - 5827862
Alignment:
| Q |
170 |
cccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactcc |
269 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| || ||| ||| || ||||| |
|
|
| T |
5827660 |
cccaaaagtatccagacacgccttacgacaaacagggcacacctcatcaataagaaatagtggaatcataagacgatatcgaaggatagtacggtactcc |
5827759 |
T |
|
| Q |
270 |
attggtaacatttgctgaactaa-ccatcaatcgagataacaagaagaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcg |
368 |
Q |
| |
|
| |||| |||| |||||| |||| |||||||| | |||| | |||||||||| ||||||||| | ||||||||||||||| || || ||||||||| | |
|
|
| T |
5827760 |
actggtgacatatgctgacctaacccatcaattgggatagctagaagaaaattttgagcatgtgctgcttgcaaacatcctaaaactgccttctgtctag |
5827859 |
T |
|
| Q |
369 |
tgg |
371 |
Q |
| |
|
||| |
|
|
| T |
5827860 |
tgg |
5827862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 117 - 372
Target Start/End: Original strand, 24527942 - 24528199
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| |||||||||||| || |||||| |||||| || |||||||| |||||||||||| || |||||||||||||||||||| ||| | |
|
|
| T |
24527942 |
aaagtcatgtctgtacttaaagccgaaaagctccttgcaatgaacggcatgctccccaaaagtatccaggtacgccttacgacaaacagggcacccctca |
24528041 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||| ||| ||||| |||||| |||| |||| || || |||| ||||||||| |||| | |||| |
|
|
| T |
24528042 |
acaataagaaatagtggaatcataaggcgatatctaatgatagtatgatactccactggtgacatatgttgtcctaacccatcaatcatgatagctagaa |
24528141 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggt |
372 |
Q |
| |
|
||||||| ||||||| | | ||||||||||||| | |||| ||||||||||||||| |
|
|
| T |
24528142 |
gaaaatcctgagcatattatgcttgcaaacatccaaatattgccttctgtctcgtggt |
24528199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 170 - 375
Target Start/End: Original strand, 32585553 - 32585759
Alignment:
| Q |
170 |
cccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactcc |
269 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||| ||| || ||| ||| ||| || ||| | |
|
|
| T |
32585553 |
cccaaaagtatccagacatgccttacgacaaatagggcacacctcattaataggaaatagtggaatcataagacgaaatctaaggatagtacggtacttc |
32585652 |
T |
|
| Q |
270 |
attggtaacatttgctgaactaa-ccatcaatcgagataacaagaagaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcg |
368 |
Q |
| |
|
|||||| |||| |||||| ||| ||||||||| |||| | |||||||||||||||| || | | |||||||||||||| | |||||||||||| | |
|
|
| T |
32585653 |
attggtgacatatgctgacataatccatcaatcaggatagccagaagaaaatcatgagaatatgttgattgcaaacatcctaaaggtgtcttctgtctag |
32585752 |
T |
|
| Q |
369 |
tggtcat |
375 |
Q |
| |
|
||||||| |
|
|
| T |
32585753 |
tggtcat |
32585759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 293
Target Start/End: Original strand, 4501608 - 4501787
Alignment:
| Q |
115 |
ataaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacct |
213 |
Q |
| |
|
|||||||| ||| ||||||||||| |||| ||||||| |||||| | ||| |||| |||||||||||| ||| |||||||||||||| | ||||||| |
|
|
| T |
4501608 |
ataaagtcgtgtgtgtacttaaagtcgggaagctccttacaatgaacgacatggtccccaaaagtatccaggcacgccttacgacaaacatgacacacct |
4501707 |
T |
|
| Q |
214 |
aatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaac |
293 |
Q |
| |
|
|||||||| ||||| |||||||||||| |||||| ||| ||| ||| | ||||||||||| |||| |||||| ||||| |
|
|
| T |
4501708 |
catcaatagaaaataatggaatcataagacgatatctaaggatagtacgatactccattggtgacatatgctgacctaac |
4501787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 170 - 375
Target Start/End: Original strand, 47679530 - 47679733
Alignment:
| Q |
170 |
cccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactcc |
269 |
Q |
| |
|
|||||||||||||| | | ||||||||||||||| |||||||| ||||||| ||||||||||||||| |||| |||| || ||| ||| | ||||| |
|
|
| T |
47679530 |
cccaaaagtatccaagcgcgccttacgacaaacagagcacacctcgtcaatagcaaatagtggaatcatgaggcaatatctatggatagtacgttactcc |
47679629 |
T |
|
| Q |
270 |
attggtaacatttgctgaactaac-catcaatcgagataacaagaagaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcg |
368 |
Q |
| |
|
| || |||| || ||| |||| |||||||| |||| | ||||||||||| ||||||||| ||||||||||||||||| || |||||||||||| | |
|
|
| T |
47679630 |
actg---acatatgttgacataactcatcaatcaggatagctagaagaaaatcctgagcatgtgctacttgcaaacatcctaaaactgtcttctgtctag |
47679726 |
T |
|
| Q |
369 |
tggtcat |
375 |
Q |
| |
|
||||||| |
|
|
| T |
47679727 |
tggtcat |
47679733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 43857242 - 43857340
Alignment:
| Q |
142 |
ggaaactccttataatgaaaggaatgctcccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataa |
240 |
Q |
| |
|
|||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||||| | |||||| |||||||| ||| ||||||||||||| |
|
|
| T |
43857242 |
ggaaactccttacaatgaactgcatgctcccaaaagtatctagacacaccttacgacaaacaagaaacacctcatcaatagaaaacagtggaatcataa |
43857340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 45613597 - 45613465
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||| ||| |||||| ||||| |||| |||||| |||||| || |||||||| ||||||||||| |||| ||||| | ||||||| ||||||| | |
|
|
| T |
45613597 |
aaagtcgtgtctgtactgaaagccgggaagttccttacaatgaacggcatgctccccaaaagtatccatacacgtcttacaataaacaggacacacctca |
45613498 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
45613497 |
tcaataggaaatagtggaatcataagacgatat |
45613465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 10905509 - 10905580
Alignment:
| Q |
170 |
cccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataag |
241 |
Q |
| |
|
||||||||||||||| || |||||||||||| ||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
10905509 |
cccaaaagtatccaggcaagccttacgacaaatagggcacacctcatcaatgagaaatagtggaatcataag |
10905580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 28517042 - 28516919
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||||||| |||||| | ||||| | ||||||||||| ||| |||||||||||||||||||||||| | |
|
|
| T |
28517042 |
aaagtcatgcttgtacttaaagctgagaagctccttacaatgaacgacatgcttcataaaagtatccaaacatgccttacgacaaacagggcacacctca |
28516943 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcata |
239 |
Q |
| |
|
|||||| ||| |||||||||||| |
|
|
| T |
28516942 |
tcaataaaaaaaagtggaatcata |
28516919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 19277645 - 19277729
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaa |
201 |
Q |
| |
|
|||||||||||||| ||||||| | ||||| |||| |||||| | |||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
19277645 |
aaagtcatgtatgt-cttaaagtcggaaaactacttacaatgaacgacatgctccccaaaagtatccagacacgccttacgacaaa |
19277729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 86; Significance: 5e-41; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 117 - 372
Target Start/End: Original strand, 53170850 - 53171107
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||| |||||||| ||| |||| ||||||| |||||| | |||||||| |||||||| ||| ||| |||||||||||||||||||||||| | |
|
|
| T |
53170850 |
aaagtcatgtctgtacttagagcggggaagctccttacaatgaacgacatgctccccaaaagtattcaggcacgccttacgacaaacagggcacacctca |
53170949 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||| ||||||||||||| ||||| ||||| ||||||| ||| | |||||| || | | || ||||||||||| |||||||| |||| | |||| |
|
|
| T |
53170950 |
tcaatagaaaatagtggaatcgtaaggtgatatctaaagatagtacgatactccactgatgatatatgctgaactaacccatcaattaggatagctagaa |
53171049 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgtggt |
372 |
Q |
| |
|
||||||| ||||||||| | ||||||||||||| | |||||| |||| ||||||||| |
|
|
| T |
53171050 |
gaaaatcctgagcatgtgctgcttgcaaacatccaaaaattgttttctttctcgtggt |
53171107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 117 - 369
Target Start/End: Original strand, 16957888 - 16958141
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||| |||||| | |||||||| ||||||||| || ||| |||||||||||||| ||||||||| | |
|
|
| T |
16957888 |
aaagtcatgtatgtacttaaagtcaggaagctccttacaatgaacgatatgctccccaaaagtatctaggcacgccttacgacaaacaaggcacacctca |
16957987 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaac-taaccatcaatcgagataacaagaa |
314 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||| ||| ||| | | |||| |||| |||| ||||| | || |||||||| |||| | |||| |
|
|
| T |
16957988 |
tcaatagaaaatagtggaatcataaggc-atatctaaggatagtacagtaatccactggtgacatatgctggccttacccatcaatgaggatagctagaa |
16958086 |
T |
|
| Q |
315 |
gaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctgtctcgt |
369 |
Q |
| |
|
||||||| |||||||| | |||||||| |||||| ||||| |||||||||||| |
|
|
| T |
16958087 |
gaaaatctagagcatgtgctgcttgcaaatatcctaaaattgccttctgtctcgt |
16958141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 375
Target Start/End: Complemental strand, 56461820 - 56461609
Alignment:
| Q |
165 |
atgctcccaaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataaggcgatatataaagattgtatggc |
264 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |||| ||| ||| ||| | |
|
|
| T |
56461820 |
atgctccccaaaatatccaggcacaccttacgaaaaacagggcacacctcatcaatagaaaatagtggaatcataaggttatatctaaggatggtacgat |
56461721 |
T |
|
| Q |
265 |
actccattggtaacatttgctgaactaacc-atcaatcgagataacaagaagaaaatcatgagcatgtcgtacttgcaaacatcctacaattgtcttctg |
363 |
Q |
| |
|
||||||||||| | || || ||| |||||| |||||| |||| | |||| |||||| ||||||||| | |||||||||||||| || | |||||| |
|
|
| T |
56461720 |
actccattggtgatatatgatgacctaaccaatcaattatgatagctagaaaaaaatcttgagcatgtgctgtttgcaaacatcctaaaacttccttctg |
56461621 |
T |
|
| Q |
364 |
tctcgtggtcat |
375 |
Q |
| |
|
||| |||||||| |
|
|
| T |
56461620 |
tctagtggtcat |
56461609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 12918065 - 12917996
Alignment:
| Q |
172 |
caaaagtatccagacacaccttacgacaaacagggcacacctaatcaataggaaatagtggaatcataag |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| || |||||||| |||||||| ||||||||| |
|
|
| T |
12918065 |
caaaagtatccagacacaccttacgacaaacatggcacatctcatcaatagaaaatagtgaaatcataag |
12917996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 246
Target Start/End: Original strand, 3330302 - 3330425
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctccc-aaaagtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||||| |||||||||||| |||| ||||||| |||||| || |||||||| |||||||| ||||||| ||||||||||| ||| || | |
|
|
| T |
3330302 |
aaagtcatgcctgtacttaaagccgggaagctccttacaatgaatggcatgctccccaaaagtatacagacacgccttacgacaa-------acatctca |
3330394 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgat |
246 |
Q |
| |
|
||||||||||| |||||||||||||| |||| |
|
|
| T |
3330395 |
tcaataggaaaaagtggaatcataagacgat |
3330425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 329
Target Start/End: Original strand, 32335307 - 32335417
Alignment:
| Q |
219 |
ataggaaatagtggaatcataaggcgatatataaagattgtatggcactccattggtaacatttgctgaactaa-ccatcaatcgagataacaagaagaa |
317 |
Q |
| |
|
|||||||||| |||||||||| |||||||| ||| ||| |||||| |||||| | | |||| || ||| |||| |||||||| | |||| | ||||||| |
|
|
| T |
32335307 |
ataggaaatattggaatcatacggcgatatctaa-gatagtatggtactccactaatgacatatgatgacctaatccatcaatagggatagctagaagaa |
32335405 |
T |
|
| Q |
318 |
aatcatgagcat |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
32335406 |
aatcatgagcat |
32335417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 48505854 - 48505821
Alignment:
| Q |
215 |
atcaataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
48505854 |
atcaatatgaaatagtggaatcataaggcgatat |
48505821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0186 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0186
Description:
Target: scaffold0186; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 20073 - 20205
Alignment:
| Q |
117 |
aaagtcatgtatgtacttaaagcttggaaactccttataatgaaaggaatgctcccaaa-agtatccagacacaccttacgacaaacagggcacacctaa |
215 |
Q |
| |
|
||||||| ||||||||||| |||| |||| ||||||| |||||| | |||||||| || ||||||||| ||| ||||| |||||| ||||||||||| | |
|
|
| T |
20073 |
aaagtcaagtatgtacttatagctaggaagctccttacaatgaactgtatgctccccaatagtatccaggcacgccttatgacaaaaagggcacacctca |
20172 |
T |
|
| Q |
216 |
tcaataggaaatagtggaatcataaggcgatat |
248 |
Q |
| |
|
||||||||||||| || |||||||||| ||||| |
|
|
| T |
20173 |
tcaataggaaataatgtaatcataaggtgatat |
20205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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